AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028657.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028657.01.T01 MTR_5g008240 76.777 211 37 2 15 222 51 252 1.42e-113 325
MsG0580028657.01.T01 MTR_5g008240 77.295 207 35 2 19 222 31 228 5.25e-111 318
MsG0580028657.01.T01 MTR_5g008240 88.068 176 18 1 50 222 11 186 9.15e-110 313
MsG0580028657.01.T01 MTR_5g008240 97.710 131 3 0 92 222 38 168 1.57e-93 271
MsG0580028657.01.T01 MTR_4g086330 38.356 146 69 5 74 213 61 191 2.63e-26 100
MsG0580028657.01.T01 MTR_4g086320 41.270 126 55 4 74 197 48 156 1.44e-25 98.2
MsG0580028657.01.T01 MTR_0172s0050 31.319 182 102 4 60 222 46 223 1.09e-23 95.1
MsG0580028657.01.T01 MTR_7g044840 32.571 175 104 5 60 221 43 216 8.79e-23 92.8
MsG0580028657.01.T01 MTR_3g408350 32.948 173 100 5 60 218 42 212 3.62e-22 91.3
MsG0580028657.01.T01 MTR_6g084940 34.014 147 77 4 74 216 15 145 1.18e-21 87.4
MsG0580028657.01.T01 MTR_8g104890 40.625 128 61 4 72 199 29 141 9.65e-18 77.8
MsG0580028657.01.T01 MTR_8g104870 38.333 120 59 4 76 195 51 155 2.35e-17 77.4
MsG0580028657.01.T01 MTR_3g408350 33.813 139 76 5 94 218 31 167 3.51e-16 74.3
MsG0580028657.01.T01 MTR_5g017650 38.211 123 58 6 76 195 51 158 8.16e-16 73.2
MsG0580028657.01.T01 MTR_3g080025 90.385 52 5 0 4 55 1 52 2.21e-15 68.2
MsG0580028657.01.T01 MTR_8g104830 32.432 148 85 4 72 218 4 137 1.24e-14 68.9
MsG0580028657.01.T01 MTR_2g101660 32.787 122 65 3 77 197 33 138 5.19e-14 67.8
MsG0580028657.01.T01 MTR_7g100870 29.143 175 79 6 77 216 63 227 4.76e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028657.01.T01 AT2G40935 70.470 149 44 0 70 218 40 188 4.50e-78 233
MsG0580028657.01.T01 AT2G40935 70.470 149 44 0 70 218 40 188 4.50e-78 233
MsG0580028657.01.T01 AT2G40935 70.470 149 44 0 70 218 40 188 4.50e-78 233
MsG0580028657.01.T01 AT2G40935 70.470 149 44 0 70 218 40 188 4.50e-78 233
MsG0580028657.01.T01 AT2G40935 70.470 149 44 0 70 218 40 188 4.50e-78 233
MsG0580028657.01.T01 AT2G40935 63.087 149 44 1 70 218 40 177 9.76e-66 201
MsG0580028657.01.T01 AT2G40935 70.079 127 38 0 92 218 38 164 9.28e-64 196
MsG0580028657.01.T01 AT2G40935 70.079 127 38 0 92 218 38 164 9.28e-64 196
MsG0580028657.01.T01 AT2G40935 70.079 127 38 0 92 218 38 164 9.28e-64 196
MsG0580028657.01.T01 AT3G18470 39.007 141 68 7 75 213 3 127 9.53e-23 90.1
MsG0580028657.01.T01 AT3G18460 36.290 124 63 3 74 197 51 158 1.18e-22 91.3
MsG0580028657.01.T01 AT5G35525 36.667 150 72 4 72 213 11 145 1.47e-22 90.1
MsG0580028657.01.T01 AT1G14870 34.000 150 76 4 72 213 11 145 1.28e-21 87.4
MsG0580028657.01.T01 AT5G51400 32.584 178 104 5 59 222 44 219 1.47e-21 89.7
MsG0580028657.01.T01 AT2G45010 30.556 180 105 5 59 222 44 219 1.96e-21 89.4
MsG0580028657.01.T01 AT1G14870 35.075 134 72 3 72 205 11 129 4.61e-21 85.9
MsG0580028657.01.T01 AT1G14880 32.680 153 74 4 72 213 10 144 1.38e-20 84.7
MsG0580028657.01.T01 AT2G45010 31.515 165 93 5 74 222 13 173 3.41e-20 85.1
MsG0580028657.01.T01 AT1G49030 38.843 121 59 3 77 197 88 193 4.12e-20 85.5
MsG0580028657.01.T01 AT1G68630 32.051 156 79 4 44 197 3 133 2.81e-18 79.0
MsG0580028657.01.T01 AT2G37110 32.203 177 75 6 75 216 73 239 2.40e-17 78.2
MsG0580028657.01.T01 AT3G18450 32.258 124 68 3 74 197 49 156 4.07e-17 76.6
MsG0580028657.01.T01 AT1G58320 37.302 126 60 5 74 197 14 122 8.28e-16 72.0
MsG0580028657.01.T01 AT1G68610 35.897 156 75 6 74 218 16 157 1.17e-15 72.0
MsG0580028657.01.T01 AT1G52200 31.707 123 65 2 77 197 53 158 3.75e-13 65.9
MsG0580028657.01.T01 AT1G52200 31.707 123 65 2 77 197 53 158 4.56e-13 65.9

Find 60 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGAAGAATGCAGAATTTC+TGG 0.136909 5:+84436419 MsG0580028657.01.T01:CDS
CTTTGTCCTTGCTACCTCTT+TGG 0.163797 5:+84436399 MsG0580028657.01.T01:CDS
CAAGACTCCACAATATAAAA+TGG 0.183305 5:-84436473 None:intergenic
GGATACAAGGTTGGCTGTTA+TGG 0.249220 5:-84432599 None:intergenic
GGATCAAATCAATGGTCTTC+TGG 0.256294 5:+84435353 MsG0580028657.01.T01:CDS
CTGGGTTCTGGCACGTTCAT+GGG 0.276161 5:+84436438 MsG0580028657.01.T01:CDS
CAAATTATACTTTGATCTTA+AGG 0.284771 5:-84436586 None:intergenic
TCTGGGTTCTGGCACGTTCA+TGG 0.317800 5:+84436437 MsG0580028657.01.T01:CDS
AATGCAGAATTTCTGGGTTC+TGG 0.323080 5:+84436426 MsG0580028657.01.T01:CDS
TTTGTCCTTGCTACCTCTTT+GGG 0.333564 5:+84436400 MsG0580028657.01.T01:CDS
GGCTTCTGTGCAGGTTGTAT+AGG 0.363558 5:+84436372 MsG0580028657.01.T01:intron
CAGCTCTTTCGCGTATTTCA+CGG 0.371837 5:-84437549 None:intergenic
GATACAAGGTTGGCTGTTAT+GGG 0.387941 5:-84432598 None:intergenic
AAGATCAAAGTATAATTTGC+CGG 0.391461 5:+84436590 MsG0580028657.01.T01:CDS
GCTCCGTTCGCCGCCGCAAT+CGG 0.396892 5:-84432700 None:intergenic
GCTCACTTCATTGATTCTTC+CGG 0.397921 5:-84432668 None:intergenic
TGGAATCTGACTGCATTGTC+TGG 0.399372 5:-84437624 None:intergenic
GGGAAGAATGCAGAATTTCT+GGG 0.403517 5:+84436420 MsG0580028657.01.T01:CDS
GTGAAATACGCGAAAGAGCT+GGG 0.429175 5:+84437551 MsG0580028657.01.T01:CDS
TCTTCCTCTTCGGTGGCGAC+TGG 0.438978 5:+84432643 MsG0580028657.01.T01:CDS
AGAAGATTCTTCTTCCTCTT+CGG 0.440090 5:+84432633 MsG0580028657.01.T01:CDS
CTTTAACTTCAACGGATACA+AGG 0.441676 5:-84432612 None:intergenic
TCTTCGGTGGCGACTGGTAC+CGG 0.443787 5:+84432649 MsG0580028657.01.T01:CDS
CGTGAAATACGCGAAAGAGC+TGG 0.454935 5:+84437550 MsG0580028657.01.T01:CDS
TTCACGGTACTCTTGACAAA+TGG 0.476167 5:-84437533 None:intergenic
GCTCCGATTGCGGCGGCGAA+CGG 0.478334 5:+84432697 MsG0580028657.01.T01:CDS
AGAATCTTCTTTAACTTCAA+CGG 0.486213 5:-84432620 None:intergenic
AGGGTTGTGGCATTACTGAT+TGG 0.487313 5:-84437644 None:intergenic
AAGACTCCACAATATAAAAT+GGG 0.490249 5:-84436472 None:intergenic
GACTGCATTGTCTGGACAGG+TGG 0.519769 5:-84437616 None:intergenic
TCTGACTGCATTGTCTGGAC+AGG 0.526290 5:-84437619 None:intergenic
AACTTCAACGGATACAAGGT+TGG 0.531654 5:-84432608 None:intergenic
GTAGCAATGGATCAAATCAA+TGG 0.532410 5:+84435345 MsG0580028657.01.T01:CDS
ATTCTGCATTCTTCCCAAAG+AGG 0.532916 5:-84436413 None:intergenic
GGCGGCGAACGGAGCATCGT+CGG 0.533889 5:+84432708 MsG0580028657.01.T01:CDS
GCCTGCTGCTTATTAACCGA+TGG 0.548925 5:+84436504 MsG0580028657.01.T01:CDS
AGATTCTTCTTCCTCTTCGG+TGG 0.552071 5:+84432636 MsG0580028657.01.T01:CDS
CACAAGCATAACACGAAACA+AGG 0.556012 5:-84436551 None:intergenic
CCATGGTGGTGTAGTAGCAA+TGG 0.557274 5:+84435332 MsG0580028657.01.T01:CDS
TGAAGCTACAGATATGAAGC+TGG 0.570972 5:+84437579 MsG0580028657.01.T01:CDS
CATGCAAGCTCCGATTGCGG+CGG 0.571325 5:+84432690 MsG0580028657.01.T01:CDS
GCCATCGGTTAATAAGCAGC+AGG 0.572611 5:-84436505 None:intergenic
TTCTTCCCAAAGAGGTAGCA+AGG 0.573956 5:-84436405 None:intergenic
TGGGTTCTGGCACGTTCATG+GGG 0.574682 5:+84436439 MsG0580028657.01.T01:CDS
TAACACGAAACAAGGCATCC+AGG 0.577372 5:-84436543 None:intergenic
CTTGTTTCGTGTTATGCTTG+TGG 0.581137 5:+84436552 MsG0580028657.01.T01:CDS
TTATGAAGGAAGCACCGTGT+GGG 0.610712 5:+84437476 MsG0580028657.01.T01:intron
ACTTTGATCTTAAGGTATTG+CGG 0.618835 5:-84436578 None:intergenic
ACTACACCACCATGGTGTAG+AGG 0.620487 5:-84435324 None:intergenic
TATGAAGGAAGCACCGTGTG+GGG 0.626423 5:+84437477 MsG0580028657.01.T01:intron
TGAAATACGCGAAAGAGCTG+GGG 0.629440 5:+84437552 MsG0580028657.01.T01:CDS
GAGCATGCAAGCTCCGATTG+CGG 0.633341 5:+84432687 MsG0580028657.01.T01:CDS
ATACAAGGTTGGCTGTTATG+GGG 0.641622 5:-84432597 None:intergenic
GGTACCAGTCGCCACCGAAG+AGG 0.652366 5:-84432647 None:intergenic
CTTATGAAGGAAGCACCGTG+TGG 0.662327 5:+84437475 MsG0580028657.01.T01:intron
GTCTCTCCTCTACACCATGG+TGG 0.675080 5:+84435318 MsG0580028657.01.T01:CDS
AGTGTCTCTCCTCTACACCA+TGG 0.703188 5:+84435315 MsG0580028657.01.T01:CDS
TGGGTTACAAAATCCCCACA+CGG 0.723662 5:-84437490 None:intergenic
TAGACAAAGCTACTGCAAAG+CGG 0.724758 5:-84432737 None:intergenic
CCATTGCTACTACACCACCA+TGG 0.734056 5:-84435332 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTATATATATATTT+TGG - Chr5:84434620-84434639 None:intergenic 0.0%
!! AAGAAAAATGTATAAATAAA+GGG - Chr5:84434229-84434248 None:intergenic 10.0%
!! AATCTAAAAAGAATAAAAAA+TGG - Chr5:84435123-84435142 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - Chr5:84434230-84434249 None:intergenic 10.0%
!!! ATCTAATTTTAAACATTAAA+TGG + Chr5:84433532-84433551 MsG0580028657.01.T01:intron 10.0%
!!! ATTTTTAAACATATTAATGA+AGG - Chr5:84433460-84433479 None:intergenic 10.0%
!!! ATTTTTTTTTAAACTTATCA+TGG + Chr5:84433992-84434011 MsG0580028657.01.T01:intron 10.0%
!!! TTTATTCTTTTTAGATTTAT+GGG + Chr5:84435126-84435145 MsG0580028657.01.T01:intron 10.0%
!!! TTTTATTCTTTTTAGATTTA+TGG + Chr5:84435125-84435144 MsG0580028657.01.T01:intron 10.0%
!! AATTATTACATATTTACATG+TGG + Chr5:84434811-84434830 MsG0580028657.01.T01:intron 15.0%
!! AATTGTATTGAAAATTGAAA+TGG - Chr5:84434135-84434154 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - Chr5:84434228-84434247 None:intergenic 15.0%
!! AGTAAATTTGAAGAATAATT+AGG + Chr5:84436815-84436834 MsG0580028657.01.T01:intron 15.0%
!! ATATAATTATTATAGAGATG+AGG - Chr5:84434380-84434399 None:intergenic 15.0%
!! ATTGTATTGAAAATTGAAAT+GGG - Chr5:84434134-84434153 None:intergenic 15.0%
!! GAATAAATTGTTTATAATGT+TGG - Chr5:84435081-84435100 None:intergenic 15.0%
!! GTTAATTACTTAAGTAAAAA+TGG + Chr5:84434941-84434960 MsG0580028657.01.T01:intron 15.0%
!! TAAACCAAAAATATTTGATT+TGG + Chr5:84433564-84433583 MsG0580028657.01.T01:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - Chr5:84434167-84434186 None:intergenic 15.0%
!! TTAATAATGAAAAGAAAATC+TGG + Chr5:84437416-84437435 MsG0580028657.01.T01:intron 15.0%
!! TTAGACAGATTAAATAAAAA+TGG + Chr5:84433923-84433942 MsG0580028657.01.T01:intron 15.0%
!!! AACATGCATTTAATTTATAT+TGG + Chr5:84433242-84433261 MsG0580028657.01.T01:intron 15.0%
!!! AACCATTTAATGTTTAAAAT+TGG - Chr5:84433537-84433556 None:intergenic 15.0%
!!! ATTTTCATGTCTTTTTTTTA+GGG - Chr5:84434480-84434499 None:intergenic 15.0%
!!! CAAAGTTTTATTTGTTTTTT+GGG - Chr5:84434774-84434793 None:intergenic 15.0%
!!! GATTTTTTTGCTTATATTTT+AGG + Chr5:84433345-84433364 MsG0580028657.01.T01:intron 15.0%
!!! GTTTTTGATGTATATATAAA+GGG + Chr5:84436062-84436081 MsG0580028657.01.T01:intron 15.0%
!!! TAAATTCATTTTCTGATTTA+CGG + Chr5:84435034-84435053 MsG0580028657.01.T01:intron 15.0%
!!! TAATGTTTACTTTTTTCTTT+GGG + Chr5:84433604-84433623 MsG0580028657.01.T01:intron 15.0%
!!! TAGATTTTTGTTAAAATGTT+TGG - Chr5:84433517-84433536 None:intergenic 15.0%
!!! TATTTTCATGTCTTTTTTTT+AGG - Chr5:84434481-84434500 None:intergenic 15.0%
!!! TTTTTGCTTATAAAAAAAGA+CGG - Chr5:84433068-84433087 None:intergenic 15.0%
!! ACAAAATGTGTCAATTAAAT+TGG + Chr5:84434263-84434282 MsG0580028657.01.T01:intron 20.0%
!! AGAAATTGAAATAAACTTGT+AGG + Chr5:84437138-84437157 MsG0580028657.01.T01:intron 20.0%
!! ATAAAATTTGATGTAAAGCA+TGG - Chr5:84436630-84436649 None:intergenic 20.0%
!! ATGTGATAAAAATGAAAGAA+AGG + Chr5:84436994-84437013 MsG0580028657.01.T01:intron 20.0%
!! ATTTATCCAACATTAGAAAA+AGG - Chr5:84435019-84435038 None:intergenic 20.0%
!! CAAAATGTGTCAATTAAATT+GGG + Chr5:84434264-84434283 MsG0580028657.01.T01:intron 20.0%
!! CAAATTATACTTTGATCTTA+AGG - Chr5:84436589-84436608 None:intergenic 20.0%
!! CACAATAATAACATAAAAGT+TGG + Chr5:84433287-84433306 MsG0580028657.01.T01:intron 20.0%
!! CCAAAAAACAAATAAAACTT+TGG + Chr5:84434772-84434791 MsG0580028657.01.T01:intron 20.0%
!! GATGTAAAAATAATTCTCAT+TGG + Chr5:84433176-84433195 MsG0580028657.01.T01:intron 20.0%
!! GGAAAATGAATATATTGTAT+TGG - Chr5:84434207-84434226 None:intergenic 20.0%
!! TATAAACAATTTATTCTCCT+TGG + Chr5:84435085-84435104 MsG0580028657.01.T01:intron 20.0%
!! TATTACTTTACTAGCAAAAA+TGG - Chr5:84434669-84434688 None:intergenic 20.0%
!! TGCTAAAATTTCTCTATTAA+AGG - Chr5:84437346-84437365 None:intergenic 20.0%
!!! AAAGATTGGTTTCAAATTTT+CGG + Chr5:84436351-84436370 MsG0580028657.01.T01:intron 20.0%
!!! AAATTCATTTTCTGATTTAC+GGG + Chr5:84435035-84435054 MsG0580028657.01.T01:intron 20.0%
!!! ATATATTTTGGTACAATAGA+GGG - Chr5:84434608-84434627 None:intergenic 20.0%
!!! ATATTCTTTTTGTCTTATGA+AGG + Chr5:84437462-84437481 MsG0580028657.01.T01:intron 20.0%
!!! CCAAAGTTTTATTTGTTTTT+TGG - Chr5:84434775-84434794 None:intergenic 20.0%
!!! CTAATGTTTACTTTTTTCTT+TGG + Chr5:84433603-84433622 MsG0580028657.01.T01:intron 20.0%
!!! GGTTTTTGATGTATATATAA+AGG + Chr5:84436061-84436080 MsG0580028657.01.T01:intron 20.0%
!!! GTCCAATTTTAAACATTAAA+TGG + Chr5:84433697-84433716 MsG0580028657.01.T01:intron 20.0%
!!! GTTTTTTGAATTTGAAACAA+GGG + Chr5:84432834-84432853 MsG0580028657.01.T01:intron 20.0%
!!! TATATATTTTGGTACAATAG+AGG - Chr5:84434609-84434628 None:intergenic 20.0%
!!! TTCTCATTGGTTAAAAATTA+TGG + Chr5:84433189-84433208 MsG0580028657.01.T01:intron 20.0%
!!! TTTTCATGTCTTTTTTTTAG+GGG - Chr5:84434479-84434498 None:intergenic 20.0%
!!! TTTTGTTAAAATGTTTGGTA+TGG - Chr5:84433512-84433531 None:intergenic 20.0%
!!! TTTTTGCTTATATTTTAGGA+CGG + Chr5:84433349-84433368 MsG0580028657.01.T01:intron 20.0%
! AAAAGGATGGATAAATAGAA+AGG - Chr5:84435002-84435021 None:intergenic 25.0%
! AAATGTTTGGTATGGAAAAT+AGG - Chr5:84433504-84433523 None:intergenic 25.0%
! AAGACTCCACAATATAAAAT+GGG - Chr5:84436475-84436494 None:intergenic 25.0%
! AATAGTAAATGGTTCTTAAC+TGG + Chr5:84436779-84436798 MsG0580028657.01.T01:intron 25.0%
! AATTGGGGTAAAATAGTAAA+TGG + Chr5:84436768-84436787 MsG0580028657.01.T01:intron 25.0%
! AGAAAAAAGTAAACATTAGC+CGG - Chr5:84433602-84433621 None:intergenic 25.0%
! AGACATCCAAAAATTTAGAT+TGG - Chr5:84437384-84437403 None:intergenic 25.0%
! ATACAAACATAATCAACAAG+AGG - Chr5:84435448-84435467 None:intergenic 25.0%
! ATGCAAAATTATGCACTATT+TGG - Chr5:84434302-84434321 None:intergenic 25.0%
! CATGGTTGTAATATTATTAC+CGG - Chr5:84436612-84436631 None:intergenic 25.0%
! CCATCCTAAAAATATATTCT+CGG - Chr5:84435785-84435804 None:intergenic 25.0%
! CTAAGAAAAATCTTCTACTA+AGG - Chr5:84435624-84435643 None:intergenic 25.0%
! GAACAGAAAATAGAAAGAAA+AGG - Chr5:84436667-84436686 None:intergenic 25.0%
! GACATCCAAAAATTTAGATT+GGG - Chr5:84437383-84437402 None:intergenic 25.0%
! TAACTCACTGAACTTATTTA+TGG + Chr5:84435989-84436008 MsG0580028657.01.T01:intron 25.0%
! TAGTAAAAGAACTGTTTGTT+AGG + Chr5:84436847-84436866 MsG0580028657.01.T01:intron 25.0%
! TATTCTTCAAATTTACTGAC+TGG - Chr5:84436812-84436831 None:intergenic 25.0%
!! AACATTTCGTTGATTGAAAT+TGG - Chr5:84434978-84434997 None:intergenic 25.0%
!! AACTTTTGTAACATACAGAA+AGG - Chr5:84436299-84436318 None:intergenic 25.0%
!! AAGATCAAAGTATAATTTGC+CGG + Chr5:84436590-84436609 MsG0580028657.01.T01:CDS 25.0%
!! AATCACCCAATCTAAATTTT+TGG + Chr5:84437375-84437394 MsG0580028657.01.T01:intron 25.0%
!! AGAATCTTCTTTAACTTCAA+CGG - Chr5:84432623-84432642 None:intergenic 25.0%
!! GTTTGTATGTTGTTTGTTTA+AGG + Chr5:84435460-84435479 MsG0580028657.01.T01:intron 25.0%
!! TTTCTTTCTATTTTCTGTTC+TGG + Chr5:84436667-84436686 MsG0580028657.01.T01:intron 25.0%
!! TTTTGTACTCTTGTTAAGTT+TGG - Chr5:84433018-84433037 None:intergenic 25.0%
!!! ATAATTTTTTGTGTTCTCCT+TGG + Chr5:84433136-84433155 MsG0580028657.01.T01:intron 25.0%
!!! CAATTTCTAGTTTTCTTCTA+GGG - Chr5:84437126-84437145 None:intergenic 25.0%
!!! GAAGTTCTGAATTTATTGTT+TGG + Chr5:84435900-84435919 MsG0580028657.01.T01:intron 25.0%
!!! GGTTTTTTGAATTTGAAACA+AGG + Chr5:84432833-84432852 MsG0580028657.01.T01:intron 25.0%
!!! TCAATTTCTAGTTTTCTTCT+AGG - Chr5:84437127-84437146 None:intergenic 25.0%
!!! TTCTGTTTTTTTCGATAAAC+TGG + Chr5:84436321-84436340 MsG0580028657.01.T01:intron 25.0%
!!! TTTCATGTCTTTTTTTTAGG+GGG - Chr5:84434478-84434497 None:intergenic 25.0%
AAAAACCACTGATGTGAAAT+AGG - Chr5:84436048-84436067 None:intergenic 30.0%
AAAACCACTGATGTGAAATA+GGG - Chr5:84436047-84436066 None:intergenic 30.0%
AAACTGGCAAATGAAAAGAT+TGG + Chr5:84436337-84436356 MsG0580028657.01.T01:intron 30.0%
AACCAATACTTAGTGATTTG+AGG + Chr5:84433112-84433131 MsG0580028657.01.T01:intron 30.0%
ACACAGATGACAACAAAAAT+GGG - Chr5:84437512-84437531 None:intergenic 30.0%
ACTTAAGTAATTAACCACCT+TGG - Chr5:84434936-84434955 None:intergenic 30.0%
AGATTGATTGATAAGCTCAT+TGG + Chr5:84435683-84435702 MsG0580028657.01.T01:intron 30.0%
ATCCAACATTAGAAAAAGGA+TGG - Chr5:84435015-84435034 None:intergenic 30.0%
ATGACGTTTAGGAAATTGTT+GGG - Chr5:84434357-84434376 None:intergenic 30.0%
ATGTGTCAATTAAATTGGGA+CGG + Chr5:84434268-84434287 MsG0580028657.01.T01:intron 30.0%
CAAGACTCCACAATATAAAA+TGG - Chr5:84436476-84436495 None:intergenic 30.0%
CACAATGCATAATATATGCA+AGG + Chr5:84436122-84436141 MsG0580028657.01.T01:intron 30.0%
CATTATTATGAAGAACCAAG+TGG + Chr5:84435240-84435259 MsG0580028657.01.T01:intron 30.0%
CTAGGAAAATATTTAGGCAT+AGG - Chr5:84437293-84437312 None:intergenic 30.0%
CTGCAACTAGGAAAATATTT+AGG - Chr5:84437299-84437318 None:intergenic 30.0%
GAACAACAACAACAATTCAT+AGG + Chr5:84432887-84432906 MsG0580028657.01.T01:intron 30.0%
GATACTCTCTTATGTAGAAT+TGG - Chr5:84437044-84437063 None:intergenic 30.0%
TACCTCAAATCACTAAGTAT+TGG - Chr5:84433117-84433136 None:intergenic 30.0%
TATTCTGTAGATACGTACAA+AGG + Chr5:84433403-84433422 MsG0580028657.01.T01:intron 30.0%
TCACTGAACTTATTTATGGT+TGG + Chr5:84435993-84436012 MsG0580028657.01.T01:intron 30.0%
TCCTAAAAATATATTCTCGG+CGG - Chr5:84435782-84435801 None:intergenic 30.0%
TGATGTATATATAAAGGGCA+TGG + Chr5:84436067-84436086 MsG0580028657.01.T01:intron 30.0%
TGCTTATAAAAAAAGACGGA+GGG - Chr5:84433064-84433083 None:intergenic 30.0%
TGTTTAACCAACACAAGAAA+AGG - Chr5:84435949-84435968 None:intergenic 30.0%
TTCACAATCTTGCTTTGTAT+AGG + Chr5:84435165-84435184 MsG0580028657.01.T01:intron 30.0%
TTGCTTATAAAAAAAGACGG+AGG - Chr5:84433065-84433084 None:intergenic 30.0%
TTTCCATGAAACTTATTCCA+AGG - Chr5:84433156-84433175 None:intergenic 30.0%
! ATCCATCCTTTTTCTAATGT+TGG + Chr5:84435010-84435029 MsG0580028657.01.T01:intron 30.0%
! ATTATAGCCTTTTCTTGTGT+TGG + Chr5:84435939-84435958 MsG0580028657.01.T01:intron 30.0%
! CACTTGGTTCTTCATAATAA+TGG - Chr5:84435242-84435261 None:intergenic 30.0%
! CAGAATTTCTGAATCCTTTT+AGG + Chr5:84437182-84437201 MsG0580028657.01.T01:intron 30.0%
! GACGCCAAATCAAATATTTT+TGG - Chr5:84433571-84433590 None:intergenic 30.0%
! GTGTTACCCATTTTATATTG+TGG + Chr5:84436466-84436485 MsG0580028657.01.T01:CDS 30.0%
! TGAGACTGGTTAATGTAATT+GGG + Chr5:84436752-84436771 MsG0580028657.01.T01:intron 30.0%
! TGTTTGTTAGGTATGTTAGT+AGG + Chr5:84436859-84436878 MsG0580028657.01.T01:intron 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - Chr5:84434121-84434140 None:intergenic 30.0%
!! GCAGATGCATTTTGAAAAAA+AGG + Chr5:84437315-84437334 MsG0580028657.01.T01:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - Chr5:84434120-84434139 None:intergenic 30.0%
!!! CCGAGAATATATTTTTAGGA+TGG + Chr5:84435782-84435801 MsG0580028657.01.T01:intron 30.0%
!!! GGACACTTTTTTTAGAAAAG+GGG - Chr5:84434099-84434118 None:intergenic 30.0%
!!! GGGACACTTTTTTTAGAAAA+GGG - Chr5:84434100-84434119 None:intergenic 30.0%
!!! TGGGACACTTTTTTTAGAAA+AGG - Chr5:84434101-84434120 None:intergenic 30.0%
AAACCACTGATGTGAAATAG+GGG - Chr5:84436046-84436065 None:intergenic 35.0%
ACATATTTACATGTGGTCGT+GGG + Chr5:84434818-84434837 MsG0580028657.01.T01:intron 35.0%
ACGAATGTAGGAGAAAAATG+AGG + Chr5:84435579-84435598 MsG0580028657.01.T01:intron 35.0%
AGAAGATTCTTCTTCCTCTT+CGG + Chr5:84432633-84432652 MsG0580028657.01.T01:CDS 35.0%
AGTAAATGGTTCTTAACTGG+AGG + Chr5:84436782-84436801 MsG0580028657.01.T01:intron 35.0%
AGTAATTAACCACCTTGGAT+TGG - Chr5:84434931-84434950 None:intergenic 35.0%
ATAAGTCCCTGATTATTGTG+AGG + Chr5:84434576-84434595 MsG0580028657.01.T01:intron 35.0%
ATTTCTCTTGAAAACACTCC+AGG + Chr5:84437243-84437262 MsG0580028657.01.T01:intron 35.0%
ATTTGACTGCCTTGACAATA+AGG + Chr5:84435868-84435887 MsG0580028657.01.T01:intron 35.0%
CACACAGATGACAACAAAAA+TGG - Chr5:84437513-84437532 None:intergenic 35.0%
CAGTACATGTTCCTTATTGT+GGG - Chr5:84435753-84435772 None:intergenic 35.0%
CATAATATATGCAAGGTCCA+GGG + Chr5:84436129-84436148 MsG0580028657.01.T01:intron 35.0%
CGAATGTAGGAGAAAAATGA+GGG + Chr5:84435580-84435599 MsG0580028657.01.T01:intron 35.0%
CTGATAGAGTTAGATAATGC+AGG + Chr5:84437072-84437091 MsG0580028657.01.T01:intron 35.0%
CTTACCTTGAACTACCTAAA+AGG - Chr5:84437199-84437218 None:intergenic 35.0%
CTTGACAATAAGGATTAGGA+GGG + Chr5:84435878-84435897 MsG0580028657.01.T01:intron 35.0%
GAATGTAGGAGAAAAATGAG+GGG + Chr5:84435581-84435600 MsG0580028657.01.T01:intron 35.0%
GATGACGTTTAGGAAATTGT+TGG - Chr5:84434358-84434377 None:intergenic 35.0%
GATGGAGAATTGATGAGAAA+TGG + Chr5:84432812-84432831 MsG0580028657.01.T01:intron 35.0%
GGCAAATAGGAACTAACTTA+TGG - Chr5:84433637-84433656 None:intergenic 35.0%
GTAGCAATGGATCAAATCAA+TGG + Chr5:84435345-84435364 MsG0580028657.01.T01:CDS 35.0%
TAAGTTAGTTCCTATTTGCC+TGG + Chr5:84433637-84433656 MsG0580028657.01.T01:intron 35.0%
TACATATTTACATGTGGTCG+TGG + Chr5:84434817-84434836 MsG0580028657.01.T01:intron 35.0%
TCTATAGGAAGTGAAAAGCT+GGG - Chr5:84436900-84436919 None:intergenic 35.0%
TCTCCTTGGAATAAGTTTCA+TGG + Chr5:84433150-84433169 MsG0580028657.01.T01:intron 35.0%
TGATTGATAAGCTCATTGGT+TGG + Chr5:84435687-84435706 MsG0580028657.01.T01:intron 35.0%
TTCAAAATGCATCTGCAACT+AGG - Chr5:84437311-84437330 None:intergenic 35.0%
TTCAAACATGCAACGTGAAA+TGG + Chr5:84433850-84433869 MsG0580028657.01.T01:intron 35.0%
TTGGTATGGAAAATAGGTGT+GGG - Chr5:84433498-84433517 None:intergenic 35.0%
TTTGGTATGGAAAATAGGTG+TGG - Chr5:84433499-84433518 None:intergenic 35.0%
! ACCGCCGAGAATATATTTTT+AGG + Chr5:84435778-84435797 MsG0580028657.01.T01:intron 35.0%
! AGTTAGATAATGCAGGTTGA+AGG + Chr5:84437079-84437098 MsG0580028657.01.T01:intron 35.0%
! ATGCACCGAAAATTTGTTCT+TGG + Chr5:84432989-84433008 MsG0580028657.01.T01:intron 35.0%
! ATGGTCTAGAACAAGTTTCA+TGG - Chr5:84434446-84434465 None:intergenic 35.0%
! CTTACCTTGTTTAATCACCA+AGG + Chr5:84435420-84435439 MsG0580028657.01.T01:intron 35.0%
! CTTGGTGATTAAACAAGGTA+AGG - Chr5:84435422-84435441 None:intergenic 35.0%
! CTTTAACTTCAACGGATACA+AGG - Chr5:84432615-84432634 None:intergenic 35.0%
! GAGACTGGTTAATGTAATTG+GGG + Chr5:84436753-84436772 MsG0580028657.01.T01:intron 35.0%
! GGATAAACGATGTTTTACTG+TGG + Chr5:84434013-84434032 MsG0580028657.01.T01:intron 35.0%
! GGTTCCCAAGAACAAATTTT+CGG - Chr5:84432997-84433016 None:intergenic 35.0%
! GTGAGACTGGTTAATGTAAT+TGG + Chr5:84436751-84436770 MsG0580028657.01.T01:intron 35.0%
! GTTAGATAATGCAGGTTGAA+GGG + Chr5:84437080-84437099 MsG0580028657.01.T01:intron 35.0%
! TGCACCGAAAATTTGTTCTT+GGG + Chr5:84432990-84433009 MsG0580028657.01.T01:intron 35.0%
! TGTTACGCATCTCTTTTGTT+AGG + Chr5:84433742-84433761 MsG0580028657.01.T01:intron 35.0%
!! AATGGATTTTTGTGAGACCA+AGG - Chr5:84435105-84435124 None:intergenic 35.0%
!! AGTTTTCTTCTAGGGAAAAC+TGG - Chr5:84437118-84437137 None:intergenic 35.0%
!! GAATCCTTTTAGGTAGTTCA+AGG + Chr5:84437192-84437211 MsG0580028657.01.T01:intron 35.0%
!! TTTTAGGGGGAGATGTTTTA+TGG - Chr5:84434465-84434484 None:intergenic 35.0%
!!! ACTCCATGCCCTTTTTTTTT+TGG - Chr5:84436173-84436192 None:intergenic 35.0%
!!! ATTTTTAGGATGGATGACAC+TGG + Chr5:84435792-84435811 MsG0580028657.01.T01:intron 35.0%
!!! TGCTTATATTTTAGGACGGA+GGG + Chr5:84433353-84433372 MsG0580028657.01.T01:intron 35.0%
!!! TTGCTTATATTTTAGGACGG+AGG + Chr5:84433352-84433371 MsG0580028657.01.T01:intron 35.0%
AACCACTGATGTGAAATAGG+GGG - Chr5:84436045-84436064 None:intergenic 40.0%
AACTTCAACGGATACAAGGT+TGG - Chr5:84432611-84432630 None:intergenic 40.0%
AAGATCTCACTGATCAGGAT+AGG - Chr5:84435831-84435850 None:intergenic 40.0%
AGAAAAATGAGGGGAACTAG+AGG + Chr5:84435590-84435609 MsG0580028657.01.T01:intron 40.0%
AGAAAAGGGGTCAGTTATTC+CGG - Chr5:84434086-84434105 None:intergenic 40.0%
AGGTAAGTTCACAGACTTTG+AGG + Chr5:84437212-84437231 MsG0580028657.01.T01:intron 40.0%
ATCAATTCTCCATCCTCCTT+CGG - Chr5:84432806-84432825 None:intergenic 40.0%
ATCCAATCCAATCCAATCCA+AGG + Chr5:84434911-84434930 MsG0580028657.01.T01:intron 40.0%
ATCCAGGTAAACCCAAAAAC+AGG - Chr5:84436530-84436549 None:intergenic 40.0%
ATGGTTGAAGTTGTCGATCA+AGG - Chr5:84434043-84434062 None:intergenic 40.0%
ATTCTGCATTCTTCCCAAAG+AGG - Chr5:84436416-84436435 None:intergenic 40.0%
CACAAGCATAACACGAAACA+AGG - Chr5:84436554-84436573 None:intergenic 40.0%
CCAACACCTCACAATAATCA+GGG - Chr5:84434585-84434604 None:intergenic 40.0%
CCACAATAAGGAACATGTAC+TGG + Chr5:84435751-84435770 MsG0580028657.01.T01:intron 40.0%
CCACCAAAAAAAAAAGGGCA+TGG + Chr5:84436167-84436186 MsG0580028657.01.T01:intron 40.0%
CCAGTACATGTTCCTTATTG+TGG - Chr5:84435754-84435773 None:intergenic 40.0%
CCTCCTAATCCTTATTGTCA+AGG - Chr5:84435880-84435899 None:intergenic 40.0%
CCTTGACAATAAGGATTAGG+AGG + Chr5:84435877-84435896 MsG0580028657.01.T01:intron 40.0%
CGTAAAAGATCTCACTGATC+AGG - Chr5:84435836-84435855 None:intergenic 40.0%
CTATAGGAAGTGAAAAGCTG+GGG - Chr5:84436899-84436918 None:intergenic 40.0%
CTCTTCAAAACCAGGCAAAT+AGG - Chr5:84433650-84433669 None:intergenic 40.0%
CTGAATCTGATTGACCCAAT+GGG - Chr5:84435287-84435306 None:intergenic 40.0%
CTGCCTTGACAATAAGGATT+AGG + Chr5:84435874-84435893 MsG0580028657.01.T01:intron 40.0%
CTGTAGATACGTACAAAGGA+AGG + Chr5:84433407-84433426 MsG0580028657.01.T01:intron 40.0%
CTTGTTTCGTGTTATGCTTG+TGG + Chr5:84436552-84436571 MsG0580028657.01.T01:CDS 40.0%
GCATAATATATGCAAGGTCC+AGG + Chr5:84436128-84436147 MsG0580028657.01.T01:intron 40.0%
GGATCAAATCAATGGTCTTC+TGG + Chr5:84435353-84435372 MsG0580028657.01.T01:CDS 40.0%
GGCCACCACCAAAAAAAAAA+GGG + Chr5:84436162-84436181 MsG0580028657.01.T01:intron 40.0%
GGGAAGAATGCAGAATTTCT+GGG + Chr5:84436420-84436439 MsG0580028657.01.T01:CDS 40.0%
GGTAAGTTCACAGACTTTGA+GGG + Chr5:84437213-84437232 MsG0580028657.01.T01:intron 40.0%
GTCTATAGGAAGTGAAAAGC+TGG - Chr5:84436901-84436920 None:intergenic 40.0%
GTTGGAACCTTATGTTGGAT+GGG + Chr5:84435709-84435728 MsG0580028657.01.T01:intron 40.0%
GTTTAGGAAATTGTTGGGAG+TGG - Chr5:84434352-84434371 None:intergenic 40.0%
TAAACCCAAAAACAGGCCAT+CGG - Chr5:84436523-84436542 None:intergenic 40.0%
TACGATGATGAGTGAAGTGA+TGG + Chr5:84432910-84432929 MsG0580028657.01.T01:intron 40.0%
TACGTACAAAGGAAGGTAGT+TGG + Chr5:84433414-84433433 MsG0580028657.01.T01:intron 40.0%
TAGACAAAGCTACTGCAAAG+CGG - Chr5:84432740-84432759 None:intergenic 40.0%
TAGAGATGAGGATGACGTTT+AGG - Chr5:84434368-84434387 None:intergenic 40.0%
TCTGAATCTGATTGACCCAA+TGG - Chr5:84435288-84435307 None:intergenic 40.0%
TGAAGCTACAGATATGAAGC+TGG + Chr5:84437579-84437598 MsG0580028657.01.T01:CDS 40.0%
TGGCCACCACCAAAAAAAAA+AGG + Chr5:84436161-84436180 MsG0580028657.01.T01:intron 40.0%
TGGGAAGAATGCAGAATTTC+TGG + Chr5:84436419-84436438 MsG0580028657.01.T01:CDS 40.0%
TGGTATGGAAAATAGGTGTG+GGG - Chr5:84433497-84433516 None:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG + Chr5:84434271-84434290 MsG0580028657.01.T01:intron 40.0%
TGTTCCTTATTGTGGGTCTA+TGG - Chr5:84435746-84435765 None:intergenic 40.0%
TTCACGGTACTCTTGACAAA+TGG - Chr5:84437536-84437555 None:intergenic 40.0%
TTTGTCCTTGCTACCTCTTT+GGG + Chr5:84436400-84436419 MsG0580028657.01.T01:CDS 40.0%
! AATGCAGAATTTCTGGGTTC+TGG + Chr5:84436426-84436445 MsG0580028657.01.T01:CDS 40.0%
! ATACAAGGTTGGCTGTTATG+GGG - Chr5:84432600-84432619 None:intergenic 40.0%
! ATTAACCGATGGCCTGTTTT+TGG + Chr5:84436515-84436534 MsG0580028657.01.T01:CDS 40.0%
! CAGTGAGATCTTTTACGAGT+AGG + Chr5:84435839-84435858 MsG0580028657.01.T01:intron 40.0%
! GATACAAGGTTGGCTGTTAT+GGG - Chr5:84432601-84432620 None:intergenic 40.0%
! TGATAAGCTCATTGGTTGGT+TGG + Chr5:84435691-84435710 MsG0580028657.01.T01:intron 40.0%
! TGGATTGGATTGGATTGGAT+TGG - Chr5:84434911-84434930 None:intergenic 40.0%
! TTAACCACCTTGGATTGGAT+TGG - Chr5:84434926-84434945 None:intergenic 40.0%
!! ATAATCAACAAGAGGCACCT+TGG - Chr5:84435440-84435459 None:intergenic 40.0%
!! GCTCACTTCATTGATTCTTC+CGG - Chr5:84432671-84432690 None:intergenic 40.0%
!! GTTTGAGTTGATGTTTCCGA+AGG + Chr5:84432787-84432806 MsG0580028657.01.T01:intron 40.0%
!! TGTTGCATTTTGAGTGAGAC+TGG + Chr5:84436738-84436757 MsG0580028657.01.T01:intron 40.0%
!! TTAACCGATGGCCTGTTTTT+GGG + Chr5:84436516-84436535 MsG0580028657.01.T01:CDS 40.0%
!!! CCATGCCCTTTTTTTTTTGG+TGG - Chr5:84436170-84436189 None:intergenic 40.0%
!!! CTATTTGCCTGGTTTTGAAG+AGG + Chr5:84433648-84433667 MsG0580028657.01.T01:intron 40.0%
!!! TGCCCTTTTTTTTTTGGTGG+TGG - Chr5:84436167-84436186 None:intergenic 40.0%
!!! TTTTTTTTTGGTGGTGGCCA+GGG - Chr5:84436161-84436180 None:intergenic 40.0%
!!! TTTTTTTTTTGGTGGTGGCC+AGG - Chr5:84436162-84436181 None:intergenic 40.0%
AGATTCTTCTTCCTCTTCGG+TGG + Chr5:84432636-84432655 MsG0580028657.01.T01:CDS 45.0%
CAATCCAATCCAATCCAAGG+TGG + Chr5:84434919-84434938 MsG0580028657.01.T01:intron 45.0%
CAGCTCTTTCGCGTATTTCA+CGG - Chr5:84437552-84437571 None:intergenic 45.0%
CCCTGATTATTGTGAGGTGT+TGG + Chr5:84434582-84434601 MsG0580028657.01.T01:intron 45.0%
CTTATGTTGGATGGGAAGAC+CGG + Chr5:84435717-84435736 MsG0580028657.01.T01:intron 45.0%
CTTTGTCCTTGCTACCTCTT+TGG + Chr5:84436399-84436418 MsG0580028657.01.T01:CDS 45.0%
GAAAAGGGGTCAGTTATTCC+GGG - Chr5:84434085-84434104 None:intergenic 45.0%
GATTTGGCGTCTTACACTAC+CGG + Chr5:84433580-84433599 MsG0580028657.01.T01:intron 45.0%
GCCAACACCTCACAATAATC+AGG - Chr5:84434586-84434605 None:intergenic 45.0%
GCTACCATAGACCCACAATA+AGG + Chr5:84435739-84435758 MsG0580028657.01.T01:intron 45.0%
GGTATGGAAAATAGGTGTGG+GGG - Chr5:84433496-84433515 None:intergenic 45.0%
GGTTGGAACCTTATGTTGGA+TGG + Chr5:84435708-84435727 MsG0580028657.01.T01:intron 45.0%
GTGAAATACGCGAAAGAGCT+GGG + Chr5:84437551-84437570 MsG0580028657.01.T01:CDS 45.0%
GTGCTAGATGACACGAATGT+AGG + Chr5:84435567-84435586 MsG0580028657.01.T01:intron 45.0%
TATTGTGGGTCTATGGTAGC+CGG - Chr5:84435739-84435758 None:intergenic 45.0%
TCACACTCCTCTTCAAAACC+AGG - Chr5:84433658-84433677 None:intergenic 45.0%
TCGTGGGTGATTTAGCAAGA+AGG + Chr5:84434834-84434853 MsG0580028657.01.T01:intron 45.0%
TGAAATACGCGAAAGAGCTG+GGG + Chr5:84437552-84437571 MsG0580028657.01.T01:CDS 45.0%
TGGAATCTGACTGCATTGTC+TGG - Chr5:84437627-84437646 None:intergenic 45.0%
TGGGTTACAAAATCCCCACA+CGG - Chr5:84437493-84437512 None:intergenic 45.0%
TTCCCCCTATTTCACATCAG+TGG + Chr5:84436040-84436059 MsG0580028657.01.T01:intron 45.0%
TTCTTCCCAAAGAGGTAGCA+AGG - Chr5:84436408-84436427 None:intergenic 45.0%
TTGATGTTTCCGAAGGAGGA+TGG + Chr5:84432794-84432813 MsG0580028657.01.T01:intron 45.0%
! AACAAGGGCGTGAATCAAAG+AGG + Chr5:84432849-84432868 MsG0580028657.01.T01:intron 45.0%
! CAAATTTTCGGCTTCTGTGC+AGG + Chr5:84436363-84436382 MsG0580028657.01.T01:intron 45.0%
! CACCTTGGATTGGATTGGAT+TGG - Chr5:84434921-84434940 None:intergenic 45.0%
! GGATACAAGGTTGGCTGTTA+TGG - Chr5:84432602-84432621 None:intergenic 45.0%
! GGCACCTTGGTGATTAAACA+AGG - Chr5:84435427-84435446 None:intergenic 45.0%
! GGTTGGTTGGAACCTTATGT+TGG + Chr5:84435704-84435723 MsG0580028657.01.T01:intron 45.0%
! TAACACGAAACAAGGCATCC+AGG - Chr5:84436546-84436565 None:intergenic 45.0%
! TGAAAACACTCCAGGTACTG+TGG + Chr5:84437251-84437270 MsG0580028657.01.T01:intron 45.0%
! TGGATTGGATTGGATGCTTC+AGG - Chr5:84434906-84434925 None:intergenic 45.0%
!! ACGGAGGGAGTACTTCTTAA+TGG - Chr5:84434062-84434081 None:intergenic 45.0%
!! TGAGTTGATGTTTCCGAAGG+AGG + Chr5:84432790-84432809 MsG0580028657.01.T01:intron 45.0%
!! TGCTGCTACTTGCTGTCTAT+AGG - Chr5:84436915-84436934 None:intergenic 45.0%
!! TTATGAAGGAAGCACCGTGT+GGG + Chr5:84437476-84437495 MsG0580028657.01.T01:intron 45.0%
!! ATAAAATAAATACAAATAAA+AGG + Chr5:84434630-84434649 MsG0580028657.01.T01:intron 5.0%
!!! AAGTAATTAATTAAATTTTT+TGG + Chr5:84435196-84435215 MsG0580028657.01.T01:intron 5.0%
ACTACACCACCATGGTGTAG+AGG - Chr5:84435327-84435346 None:intergenic 50.0%
AGTGTCTCTCCTCTACACCA+TGG + Chr5:84435315-84435334 MsG0580028657.01.T01:CDS 50.0%
CCACCTGCTTACATCCCATT+GGG + Chr5:84435270-84435289 MsG0580028657.01.T01:intron 50.0%
CCATTGCTACTACACCACCA+TGG - Chr5:84435335-84435354 None:intergenic 50.0%
CGGTCTTCCCATCCAACATA+AGG - Chr5:84435719-84435738 None:intergenic 50.0%
CGTGAAATACGCGAAAGAGC+TGG + Chr5:84437550-84437569 MsG0580028657.01.T01:CDS 50.0%
CTCATCTCAGATGATGTGCC+AGG - Chr5:84436947-84436966 None:intergenic 50.0%
GCAGGTGGAACATAACCACT+TGG - Chr5:84435258-84435277 None:intergenic 50.0%
GGCTTCTGTGCAGGTTGTAT+AGG + Chr5:84436372-84436391 MsG0580028657.01.T01:intron 50.0%
GTAGCAGCAACTTTGAGTCC+TGG + Chr5:84436926-84436945 MsG0580028657.01.T01:intron 50.0%
TCCACCTGCTTACATCCCAT+TGG + Chr5:84435269-84435288 MsG0580028657.01.T01:intron 50.0%
TCTGACTGCATTGTCTGGAC+AGG - Chr5:84437622-84437641 None:intergenic 50.0%
TGACCCAATGGGATGTAAGC+AGG - Chr5:84435276-84435295 None:intergenic 50.0%
! CCATGGTGGTGTAGTAGCAA+TGG + Chr5:84435332-84435351 MsG0580028657.01.T01:CDS 50.0%
! GCCATCGGTTAATAAGCAGC+AGG - Chr5:84436508-84436527 None:intergenic 50.0%
! GCCTGCTGCTTATTAACCGA+TGG + Chr5:84436504-84436523 MsG0580028657.01.T01:CDS 50.0%
!! CTTATGAAGGAAGCACCGTG+TGG + Chr5:84437475-84437494 MsG0580028657.01.T01:intron 50.0%
!! GAGAAGTGTTCCACAGTACC+TGG - Chr5:84437264-84437283 None:intergenic 50.0%
!! TATGAAGGAAGCACCGTGTG+GGG + Chr5:84437477-84437496 MsG0580028657.01.T01:intron 50.0%
!!! GGCCTGTTTTTGGGTTTACC+TGG + Chr5:84436525-84436544 MsG0580028657.01.T01:CDS 50.0%
AAGGTCCAGGGTTCAAACCC+TGG + Chr5:84436141-84436160 MsG0580028657.01.T01:intron 55.0%
AGGGGTCAGTTATTCCGGGA+CGG - Chr5:84434081-84434100 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG - Chr5:84436098-84436117 None:intergenic 55.0%
CCCAATGGGATGTAAGCAGG+TGG - Chr5:84435273-84435292 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + Chr5:84436095-84436114 MsG0580028657.01.T01:intron 55.0%
GACTGCATTGTCTGGACAGG+TGG - Chr5:84437619-84437638 None:intergenic 55.0%
GAGCATGCAAGCTCCGATTG+CGG + Chr5:84432687-84432706 MsG0580028657.01.T01:CDS 55.0%
GTCAGTTATTCCGGGACGGA+GGG - Chr5:84434077-84434096 None:intergenic 55.0%
GTCTCTCCTCTACACCATGG+TGG + Chr5:84435318-84435337 MsG0580028657.01.T01:CDS 55.0%
! CTGGGTTCTGGCACGTTCAT+GGG + Chr5:84436438-84436457 MsG0580028657.01.T01:CDS 55.0%
! TCTGGGTTCTGGCACGTTCA+TGG + Chr5:84436437-84436456 MsG0580028657.01.T01:CDS 55.0%
! TGGGTTCTGGCACGTTCATG+GGG + Chr5:84436439-84436458 MsG0580028657.01.T01:CDS 55.0%
!! AAGAAGTACTCCCTCCGTCC+CGG + Chr5:84434064-84434083 MsG0580028657.01.T01:intron 55.0%
CATGCAAGCTCCGATTGCGG+CGG + Chr5:84432690-84432709 MsG0580028657.01.T01:CDS 60.0%
GGTCAGTTATTCCGGGACGG+AGG - Chr5:84434078-84434097 None:intergenic 60.0%
TCTTCCTCTTCGGTGGCGAC+TGG + Chr5:84432643-84432662 MsG0580028657.01.T01:CDS 60.0%
TCTTCGGTGGCGACTGGTAC+CGG + Chr5:84432649-84432668 MsG0580028657.01.T01:CDS 60.0%
GGTACCAGTCGCCACCGAAG+AGG - Chr5:84432650-84432669 None:intergenic 65.0%
GGTGGCCAGGGTTTGAACCC+TGG - Chr5:84436149-84436168 None:intergenic 65.0%
GCTCCGATTGCGGCGGCGAA+CGG + Chr5:84432697-84432716 MsG0580028657.01.T01:CDS 70.0%
GCTCCGTTCGCCGCCGCAAT+CGG - Chr5:84432703-84432722 None:intergenic 70.0%
!! GGCGGCGAACGGAGCATCGT+CGG + Chr5:84432708-84432727 MsG0580028657.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 84432583 84437654 84432583 ID=MsG0580028657.01;Name=MsG0580028657.01
Chr5 mRNA 84432583 84437654 84432583 ID=MsG0580028657.01.T01;Parent=MsG0580028657.01;Name=MsG0580028657.01.T01;_AED=0.55;_eAED=0.59;_QI=0|0|0|0.75|1|1|4|0|222
Chr5 exon 84432583 84432746 84432583 ID=MsG0580028657.01.T01:exon:692;Parent=MsG0580028657.01.T01
Chr5 exon 84435301 84435407 84435301 ID=MsG0580028657.01.T01:exon:693;Parent=MsG0580028657.01.T01
Chr5 exon 84436385 84436611 84436385 ID=MsG0580028657.01.T01:exon:694;Parent=MsG0580028657.01.T01
Chr5 exon 84437484 84437654 84437484 ID=MsG0580028657.01.T01:exon:695;Parent=MsG0580028657.01.T01
Chr5 CDS 84432583 84432746 84432583 ID=MsG0580028657.01.T01:cds;Parent=MsG0580028657.01.T01
Chr5 CDS 84435301 84435407 84435301 ID=MsG0580028657.01.T01:cds;Parent=MsG0580028657.01.T01
Chr5 CDS 84436385 84436611 84436385 ID=MsG0580028657.01.T01:cds;Parent=MsG0580028657.01.T01
Chr5 CDS 84437484 84437654 84437484 ID=MsG0580028657.01.T01:cds;Parent=MsG0580028657.01.T01
Gene Sequence

>MsG0580028657.01.T01

ATGAAACTCATGATCCCCATAACAGCCAACCTTGTATCCGTTGAAGTTAAAGAAGATTCTTCTTCCTCTTCGGTGGCGACTGGTACCGGAAGAATCAATGAAGTGAGCATGCAAGCTCCGATTGCGGCGGCGAACGGAGCATCGTCGGCGAACACCGCTTTGCAATTCAGAGACAATGAGTGTCTCTCCTCTACACCATGGTGGTGTAGTAGCAATGGATCAAATCAATGGTCTTCTGGAATCTGTGCTTGTTTCGATGATATGCAGAGCTGTTGTATAGGTTGTCTTTGTCCTTGCTACCTCTTTGGGAAGAATGCAGAATTTCTGGGTTCTGGCACGTTCATGGGGTCATGTGTTACCCATTTTATATTGTGGAGTCTTGTTAATGCAGCCTGCTGCTTATTAACCGATGGCCTGTTTTTGGGTTTACCTGGATGCCTTGTTTCGTGTTATGCTTGTGGCTACCGCAATACCTTAAGATCAAAGTATAATTTGCCGGAAGCACCGTGTGGGGATTTTGTAACCCATTTTTGTTGTCATCTGTGTGCCATTTGTCAAGAGTACCGTGAAATACGCGAAAGAGCTGGGGATTCTGAAGCTACAGATATGAAGCTGGCAGTAGTTACAGCTCCACCTGTCCAGACAATGCAGTCAGATTCCAATCAGTAA
Protein sequence

>MsG0580028657.01.T01

MKLMIPITANLVSVEVKEDSSSSSVATGTGRINEVSMQAPIAAANGASSANTALQFRDNECLSSTPWWCSSNGSNQWSSGICACFDDMQSCCIGCLCPCYLFGKNAEFLGSGTFMGSCVTHFILWSLVNAACCLLTDGLFLGLPGCLVSCYACGYRNTLRSKYNLPEAPCGDFVTHFCCHLCAICQEYREIRERAGDSEATDMKLAVVTAPPVQTMQSDSNQ*