AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028749.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028749.01.T01 MTR_5g076010 84.219 640 28 2 1 640 1 567 0.0 1082
MsG0580028749.01.T01 MTR_2g049540 93.385 514 34 0 127 640 1 514 0.0 1004
MsG0580028749.01.T01 MTR_5g076080 96.460 113 4 0 1 113 50 162 1.85e-72 234
MsG0580028749.01.T01 MTR_5g076080 96.460 113 4 0 1 113 1 113 2.67e-72 232
MsG0580028749.01.T01 MTR_6g037360 82.292 96 17 0 1 96 1 96 1.29e-48 166
MsG0580028749.01.T01 MTR_7g056613 23.446 354 229 7 288 600 153 505 5.71e-21 97.1
MsG0580028749.01.T01 MTR_8g091670 24.603 378 226 11 262 628 101 430 1.50e-19 92.4
MsG0580028749.01.T01 MTR_1g008360 24.324 370 257 10 243 604 68 422 1.31e-17 86.3
MsG0580028749.01.T01 MTR_3g033040 23.653 334 243 7 288 614 135 463 1.43e-17 86.7
MsG0580028749.01.T01 MTR_3g033040 24.615 260 187 6 286 540 204 459 3.43e-15 79.3
MsG0580028749.01.T01 MTR_3g033040 23.442 337 246 7 285 614 132 463 1.78e-17 86.3
MsG0580028749.01.T01 MTR_3g053350 23.099 342 248 8 291 626 426 758 2.85e-17 86.7
MsG0580028749.01.T01 MTR_3g053350 21.767 464 329 12 180 630 110 552 6.23e-13 72.4
MsG0580028749.01.T01 MTR_2g102210 22.286 350 262 6 287 630 162 507 2.44e-16 83.2
MsG0580028749.01.T01 MTR_3g111940 50.000 66 32 1 48 113 49 113 2.68e-15 75.5
MsG0580028749.01.T01 MTR_4g123860 23.881 335 241 7 288 614 141 469 3.16e-15 79.3
MsG0580028749.01.T01 MTR_8g071970 27.749 191 132 5 288 473 597 786 1.19e-13 74.7
MsG0580028749.01.T01 MTR_3g105900 21.534 339 246 7 304 632 219 547 1.56e-13 74.7
MsG0580028749.01.T01 MTR_4g107210 29.319 191 124 5 286 469 139 325 4.55e-13 73.2
MsG0580028749.01.T01 MTR_4g107210 28.834 163 114 2 288 449 282 443 1.88e-11 67.8
MsG0580028749.01.T01 MTR_6g022260 35.246 122 76 2 321 441 271 390 6.32e-13 72.0
MsG0580028749.01.T01 MTR_6g022260 22.817 355 221 9 296 640 208 519 1.66e-11 67.8
MsG0580028749.01.T01 MTR_5g007250 28.409 176 121 3 281 455 424 595 6.73e-13 72.8
MsG0580028749.01.T01 MTR_1g112240 22.364 313 222 8 288 591 213 513 8.17e-13 71.6
MsG0580028749.01.T01 MTR_3g078580 29.064 203 136 5 280 476 197 397 1.22e-12 70.9
MsG0580028749.01.T01 MTR_3g115270 24.036 337 240 8 288 615 212 541 2.52e-12 70.5
MsG0580028749.01.T01 MTR_2g036560 22.741 343 242 7 303 634 291 621 8.74e-12 68.9
MsG0580028749.01.T01 MTR_7g007400 25.000 272 183 9 296 555 224 486 1.09e-11 68.2
MsG0580028749.01.T01 MTR_1g031720 33.962 159 95 5 296 448 496 650 1.16e-11 68.6
MsG0580028749.01.T01 MTR_5g031740 22.973 370 263 10 275 632 318 677 1.78e-11 67.8
MsG0580028749.01.T01 MTR_1g008310 28.105 153 107 2 301 453 339 488 1.99e-11 67.4
MsG0580028749.01.T01 MTR_7g091410 22.830 311 230 7 292 597 474 779 1.99e-11 67.8
MsG0580028749.01.T01 MTR_5g077220 24.638 207 147 4 267 470 487 687 2.12e-11 67.8
MsG0580028749.01.T01 MTR_7g405940 24.908 273 182 9 296 555 242 504 2.25e-11 67.4
MsG0580028749.01.T01 MTR_7g091410 22.256 328 245 7 292 614 270 592 3.60e-11 66.6
MsG0580028749.01.T01 MTR_7g091410 22.256 328 245 7 292 614 229 551 3.97e-11 66.6
MsG0580028749.01.T01 MTR_7g091410 22.830 311 230 7 292 597 335 640 3.98e-11 66.6
MsG0580028749.01.T01 MTR_3g114700 26.543 162 116 3 288 448 146 305 6.23e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028749.01.T01 AT2G30780 44.595 444 227 5 192 630 22 451 2.07e-132 396
MsG0580028749.01.T01 AT2G30780 44.595 444 227 5 192 630 22 451 2.07e-132 396
MsG0580028749.01.T01 AT2G48000 43.607 438 227 8 203 632 43 468 4.22e-114 350
MsG0580028749.01.T01 AT5G10860 70.175 114 33 1 1 113 1 114 2.36e-51 176
MsG0580028749.01.T01 AT5G48730 26.377 345 240 7 288 624 153 491 4.38e-22 100
MsG0580028749.01.T01 AT3G53170 25.000 356 253 7 288 635 97 446 5.92e-19 90.5
MsG0580028749.01.T01 AT4G39620 29.339 242 150 8 262 494 117 346 9.02e-19 90.5
MsG0580028749.01.T01 AT4G39620 25.490 204 145 4 292 489 215 417 7.63e-14 75.1
MsG0580028749.01.T01 AT4G39620 29.339 242 150 8 262 494 117 346 9.47e-19 90.5
MsG0580028749.01.T01 AT4G39620 25.490 204 145 4 292 489 215 417 6.89e-14 75.1
MsG0580028749.01.T01 AT3G53170 24.665 373 260 9 262 626 128 487 5.54e-18 87.8
MsG0580028749.01.T01 AT3G53170 24.665 373 260 9 262 626 128 487 5.54e-18 87.8
MsG0580028749.01.T01 AT3G53170 24.834 302 208 8 262 552 128 421 1.50e-15 80.1
MsG0580028749.01.T01 AT1G74850 30.412 194 124 5 286 472 142 331 1.23e-14 78.2
MsG0580028749.01.T01 AT3G16010 21.569 357 268 6 289 638 166 517 1.37e-14 77.8
MsG0580028749.01.T01 AT1G47271 39.583 96 57 1 18 113 7 101 4.20e-14 71.6
MsG0580028749.01.T01 AT2G35130 26.667 210 147 4 288 494 299 504 5.37e-14 75.5
MsG0580028749.01.T01 AT2G35130 26.230 244 163 7 288 520 302 539 5.54e-14 75.5
MsG0580028749.01.T01 AT2G35130 26.667 210 147 4 288 494 324 529 6.43e-14 75.5
MsG0580028749.01.T01 AT1G03560 27.230 213 147 5 354 562 186 394 8.61e-14 75.1
MsG0580028749.01.T01 AT3G06430 27.700 213 144 6 288 495 127 334 1.24e-13 74.3
MsG0580028749.01.T01 AT3G06430 29.560 159 111 1 288 445 198 356 3.94e-13 72.8
MsG0580028749.01.T01 AT2G17140 23.499 383 265 10 262 630 128 496 1.01e-12 72.0
MsG0580028749.01.T01 AT2G17140 23.499 383 265 10 262 630 128 496 1.01e-12 72.0
MsG0580028749.01.T01 AT4G11690 26.339 224 154 6 296 512 180 399 1.54e-12 70.9
MsG0580028749.01.T01 AT5G50280 34.559 136 86 3 310 443 369 503 1.73e-12 71.2
MsG0580028749.01.T01 AT4G11690 26.339 224 154 6 296 512 207 426 2.02e-12 70.5
MsG0580028749.01.T01 AT1G12300 24.126 286 193 9 232 509 215 484 2.16e-12 70.5
MsG0580028749.01.T01 AT1G09820 24.375 320 221 9 321 629 225 534 2.51e-12 70.5
MsG0580028749.01.T01 AT1G12775 26.818 220 144 8 283 494 261 471 2.95e-12 70.1
MsG0580028749.01.T01 AT1G63070 25.182 274 154 7 242 472 210 475 4.50e-12 69.7
MsG0580028749.01.T01 AT1G74900 29.936 157 108 2 288 443 233 388 5.77e-12 68.9
MsG0580028749.01.T01 AT1G12700 29.012 162 113 2 288 448 231 391 2.53e-11 67.0
MsG0580028749.01.T01 AT1G12700 29.012 162 113 2 288 448 247 407 2.79e-11 67.0
MsG0580028749.01.T01 AT1G12700 29.012 162 113 2 288 448 247 407 2.79e-11 67.0
MsG0580028749.01.T01 AT1G20300 22.109 294 201 9 286 571 152 425 3.15e-11 66.6
MsG0580028749.01.T01 AT5G02860 26.946 167 120 2 288 453 352 517 3.56e-11 67.0
MsG0580028749.01.T01 AT5G02860 26.946 167 120 2 288 453 352 517 3.56e-11 67.0
MsG0580028749.01.T01 AT5G02860 26.946 167 120 2 288 453 352 517 3.56e-11 67.0
MsG0580028749.01.T01 AT5G02860 26.946 167 120 2 288 453 352 517 3.56e-11 67.0
MsG0580028749.01.T01 AT5G02860 26.946 167 120 2 288 453 352 517 3.56e-11 67.0
MsG0580028749.01.T01 AT1G64580 29.534 193 124 6 296 480 193 381 3.69e-11 66.6
MsG0580028749.01.T01 AT2G18940 22.024 336 245 8 307 634 268 594 4.66e-11 66.6
MsG0580028749.01.T01 AT4G19440 31.285 179 118 4 273 447 608 785 6.86e-11 66.2
MsG0580028749.01.T01 AT4G19440 31.285 179 118 4 273 447 608 785 6.86e-11 66.2
MsG0580028749.01.T01 AT4G19440 31.285 179 118 4 273 447 608 785 6.86e-11 66.2
MsG0580028749.01.T01 AT4G19440 31.285 179 118 4 273 447 608 785 6.86e-11 66.2
MsG0580028749.01.T01 AT1G64583 29.487 156 106 3 296 448 160 314 7.06e-11 65.5
MsG0580028749.01.T01 AT1G64583 29.487 156 106 3 296 448 185 339 8.78e-11 65.1

Find 189 sgRNAs with CRISPR-Local

Find 325 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGTTTCTGTGTTCTTTA+AGG 0.085046 5:-85835096 MsG0580028749.01.T01:three_prime_UTR
TGTTAGGGTTTCATATATTT+TGG 0.108973 5:-85839301 MsG0580028749.01.T01:CDS
CTCTTCTTTAGGAATGTTTA+TGG 0.119753 5:-85835329 MsG0580028749.01.T01:three_prime_UTR
CTTGATGGTATTTGCCTATT+TGG 0.140078 5:+85836969 None:intergenic
TCCACTTATAATTATTTAAT+TGG 0.148085 5:-85838064 MsG0580028749.01.T01:CDS
TCTTGCTGTTGAGCTATTTA+AGG 0.156876 5:-85838329 MsG0580028749.01.T01:CDS
TCAACTTTCAGGTGATTAAT+TGG 0.180104 5:-85838456 MsG0580028749.01.T01:intron
ATTTAAGGAGGCAGAATTTA+AGG 0.185625 5:-85838314 MsG0580028749.01.T01:CDS
GGTATGCAATTCGTTGAATT+TGG 0.187999 5:+85839557 None:intergenic
ATAATAATACCTCAAGTAAA+AGG 0.201277 5:+85839202 None:intergenic
GGTATTTGTTCGGTGGATTC+TGG 0.206398 5:+85839423 None:intergenic
CCTCTTTGAAAGGCAAATTT+TGG 0.256443 5:+85835452 None:intergenic
CAAAGATAATACTCTTCTTT+AGG 0.256834 5:-85835340 MsG0580028749.01.T01:three_prime_UTR
AGAGGATAAAGTCGCAATTT+TGG 0.257986 5:-85839355 MsG0580028749.01.T01:CDS
CTAAAACTGTAGACAAATTC+AGG 0.263730 5:+85837235 None:intergenic
TAAACGACATGCCAATTATC+AGG 0.267402 5:-85837871 MsG0580028749.01.T01:CDS
GTGTAGCTTCTGATTATGTT+AGG 0.292755 5:-85839317 MsG0580028749.01.T01:CDS
TTTGTTTCTCGACATGAAAA+AGG 0.297098 5:-85838215 MsG0580028749.01.T01:CDS
CACTTGGATGTGGGGTGATA+TGG 0.305183 5:-85838029 MsG0580028749.01.T01:CDS
CTGCAGCTAGCAAATGGTTT+TGG 0.307390 5:+85836873 None:intergenic
CAGCACTTACAATGCACTAA+TGG 0.312427 5:-85838278 MsG0580028749.01.T01:CDS
CGTTGAATATATTTGATGAT+TGG 0.313827 5:-85837194 MsG0580028749.01.T01:three_prime_UTR
GTGCTGATGGTTCTTGGCTT+TGG 0.314888 5:-85839872 MsG0580028749.01.T01:CDS
CATATCATAACCCTGATAAT+TGG 0.322842 5:+85837860 None:intergenic
ATGGAATGTGATAGTGAAAA+TGG 0.329548 5:-85836918 MsG0580028749.01.T01:three_prime_UTR
ACTAGGTCTAAGACCTTGTT+TGG 0.330658 5:+85839480 None:intergenic
TTCAAAAGTTGAATATAAAC+AGG 0.331137 5:+85839246 None:intergenic
GCGACTTTATCCTCTTGATT+TGG 0.334524 5:+85839363 None:intergenic
GTAAAGGTGCTGATGGTTCT+TGG 0.335998 5:-85839878 MsG0580028749.01.T01:CDS
GCAAAATGTCCTTGAGGAAA+TGG 0.336938 5:-85837483 MsG0580028749.01.T01:CDS
TGAAAATTGGAAAATGAGAT+TGG 0.341730 5:-85836653 MsG0580028749.01.T01:three_prime_UTR
CAGAATTCTGAATATTTGAT+TGG 0.347821 5:-85839276 MsG0580028749.01.T01:CDS
TGTTTATGATGCTGTCAAAT+TGG 0.347937 5:-85839832 MsG0580028749.01.T01:intron
ACCAGACGTTCTGTACTTGC+AGG 0.350513 5:-85837578 MsG0580028749.01.T01:CDS
GAACGCACCACTCACCAAAT+AGG 0.358076 5:-85836983 MsG0580028749.01.T01:three_prime_UTR
CATAACCACGAATCATTAAC+AGG 0.359090 5:+85837951 None:intergenic
TTATGCACACTTGGGTAATC+TGG 0.359557 5:-85837933 MsG0580028749.01.T01:CDS
GCCAAATGGACTTCTTCAAC+TGG 0.360392 5:-85837113 MsG0580028749.01.T01:three_prime_UTR
TAATTATAAGTGGATATATT+AGG 0.366802 5:+85838073 None:intergenic
ATGTTCTCATTCAATCTTGA+TGG 0.372642 5:+85836954 None:intergenic
GGAAAACTGTTTGGAGGAAA+TGG 0.385760 5:-85837717 MsG0580028749.01.T01:CDS
ATAAGCAGTATACATGTTAC+TGG 0.386875 5:+85835034 None:intergenic
TTATGCCGAGGAAAACTGTT+TGG 0.389812 5:-85837726 MsG0580028749.01.T01:CDS
GACCAGCTTAGAATGATATA+AGG 0.396323 5:+85837538 None:intergenic
GGATAATGTACAAAGCTTAC+TGG 0.397961 5:-85837424 MsG0580028749.01.T01:CDS
GCAATTGATTTCTCCTCCCC+TGG 0.398515 5:+85839681 None:intergenic
AAGAAGTGCTTCATTGTATA+CGG 0.402094 5:-85835070 MsG0580028749.01.T01:three_prime_UTR
GATGGAAAAGATATATTTGC+TGG 0.403695 5:-85837906 MsG0580028749.01.T01:CDS
TAATAAAAGCATTCCTTGTA+AGG 0.412666 5:-85837043 MsG0580028749.01.T01:three_prime_UTR
AGGATAACTGCGTGAACATT+TGG 0.414975 5:+85839635 None:intergenic
GATATATCTCCACTTGGATG+TGG 0.417294 5:-85838039 MsG0580028749.01.T01:CDS
TCAGACATCTTGCAAGGAAA+AGG 0.429987 5:-85839900 MsG0580028749.01.T01:CDS
AGGCAAAGCTTTGGACTTGA+AGG 0.433387 5:-85835429 MsG0580028749.01.T01:three_prime_UTR
CCCAGTTGAAGAAGTCCATT+TGG 0.433970 5:+85837112 None:intergenic
ACCAATTAAATAATTATAAG+TGG 0.435009 5:+85838063 None:intergenic
TTTAAGGAGGCAGAATTTAA+GGG 0.435939 5:-85838313 MsG0580028749.01.T01:CDS
GACGTGGTTTGGTATTTGTT+CGG 0.439274 5:+85839413 None:intergenic
ATTTGATGATTGGATTGGAT+TGG 0.446876 5:-85837184 MsG0580028749.01.T01:three_prime_UTR
AGCACTTACAATGCACTAAT+GGG 0.449145 5:-85838277 MsG0580028749.01.T01:CDS
ACTTACCTGTTAATGATTCG+TGG 0.449598 5:-85837956 MsG0580028749.01.T01:CDS
TCAAAGAGGAGGCAAAGCTT+TGG 0.451398 5:-85835438 MsG0580028749.01.T01:three_prime_UTR
AATATATTTGATGATTGGAT+TGG 0.451802 5:-85837189 MsG0580028749.01.T01:three_prime_UTR
TGTAGCTTCTGATTATGTTA+GGG 0.451827 5:-85839316 MsG0580028749.01.T01:CDS
ACTTTATCCTCTTGATTTGG+AGG 0.451985 5:+85839366 None:intergenic
GGGGAGGAGAAATCAATTGC+TGG 0.452072 5:-85839678 MsG0580028749.01.T01:CDS
ACTTATAATTATTTAATTGG+TGG 0.454534 5:-85838061 MsG0580028749.01.T01:CDS
GGTGGATTCTGGATTTGAAA+TGG 0.455261 5:+85839434 None:intergenic
CGAATATCGTTTGATGAATG+TGG 0.457956 5:+85839524 None:intergenic
ACAAGGTCTAAGACGTGGTT+TGG 0.458972 5:+85839402 None:intergenic
CCCTGCAAGTACAGAACGTC+TGG 0.460643 5:+85837577 None:intergenic
CATTCTAAGCTGGTCATGTA+TGG 0.463012 5:-85837530 MsG0580028749.01.T01:CDS
TTATGATGGAAATGCATCAA+TGG 0.464137 5:+85837334 None:intergenic
CTCAGCAATATAAATTATGA+TGG 0.465846 5:+85837320 None:intergenic
CTTGGGTAATCTGGAGAAGA+TGG 0.466453 5:-85837924 MsG0580028749.01.T01:CDS
TATGATGGAAATGCATCAAT+GGG 0.473788 5:+85837335 None:intergenic
ACAAAACAATGTTGGAGCTT+TGG 0.474704 5:-85839715 MsG0580028749.01.T01:CDS
TCAAACCGTGAAAAGGCAAC+TGG 0.475093 5:+85839975 None:intergenic
CCAAATGGACTTCTTCAACT+GGG 0.477458 5:-85837112 MsG0580028749.01.T01:three_prime_UTR
AAAGATATATTTGCTGGTAA+AGG 0.480718 5:-85837900 MsG0580028749.01.T01:CDS
TCCATCTTCTTAGAGTGTGA+TGG 0.481799 5:-85836804 MsG0580028749.01.T01:three_prime_UTR
GCCATCACACTCTAAGAAGA+TGG 0.486403 5:+85836803 None:intergenic
ACTTAATTTACATACAGTAC+TGG 0.490613 5:-85835217 MsG0580028749.01.T01:three_prime_UTR
CCAAAATTTGCCTTTCAAAG+AGG 0.493003 5:-85835452 MsG0580028749.01.T01:three_prime_UTR
CATTAGTGCATTGTAAGTGC+TGG 0.496635 5:+85838279 None:intergenic
CAAGAACTGCAGCTAGCAAA+TGG 0.497033 5:+85836867 None:intergenic
AGCTTTGCCTCCTCTTTGAA+AGG 0.497065 5:+85835442 None:intergenic
TGCTACACCTGCTCGTATTG+AGG 0.498372 5:-85839949 MsG0580028749.01.T01:CDS
GCTTTGGTGGTCGTGAAACC+AGG 0.501681 5:-85839699 MsG0580028749.01.T01:CDS
CAAATGGACTTCTTCAACTG+GGG 0.503432 5:-85837111 MsG0580028749.01.T01:three_prime_UTR
AAGGCAACTGGCTGCAACAA+GGG 0.505517 5:+85839987 None:intergenic
GCTGGAATTATTGCAGAAAG+AGG 0.505878 5:-85839660 MsG0580028749.01.T01:CDS
GATTCGTGGTTATGCACACT+TGG 0.507360 5:-85837942 MsG0580028749.01.T01:CDS
TGCCGAGGAAAACTGTTTGG+AGG 0.507545 5:-85837723 MsG0580028749.01.T01:CDS
AAACAATGTTGGAGCTTTGG+TGG 0.508153 5:-85839712 MsG0580028749.01.T01:CDS
GAATATCGTTTGATGAATGT+GGG 0.509169 5:+85839525 None:intergenic
GGAGGAGTTCATGCAGGTAA+TGG 0.510135 5:-85836632 MsG0580028749.01.T01:three_prime_UTR
ATGGGTGCTTATATGTTCAA+TGG 0.512023 5:-85838259 MsG0580028749.01.T01:CDS
ACTCTAGCATACTGAGCAGC+AGG 0.512185 5:+85835479 None:intergenic
AGTGGATATATTAGGTGCAA+GGG 0.513961 5:+85838081 None:intergenic
TACCTACATATTATTTGAGA+TGG 0.516488 5:+85837085 None:intergenic
GAGTTGTGGTCAGAGATCCT+TGG 0.518472 5:-85837402 MsG0580028749.01.T01:CDS
CTCCTTATATCATTCTAAGC+TGG 0.521166 5:-85837540 MsG0580028749.01.T01:CDS
ACAGAACATGTTTATAGATA+CGG 0.521432 5:+85837277 None:intergenic
TAATAATACCTCAAGTAAAA+GGG 0.524445 5:+85839203 None:intergenic
TTCAGGTGATTAATTGGAGA+AGG 0.524903 5:-85838450 MsG0580028749.01.T01:intron
ATATATCTCCACTTGGATGT+GGG 0.525177 5:-85838038 MsG0580028749.01.T01:CDS
AGCAGACTCAAACCGTGAAA+AGG 0.527310 5:+85839968 None:intergenic
TCACATGGAAGCAACATTCA+AGG 0.532551 5:-85838119 MsG0580028749.01.T01:CDS
GGAAAAGACAACTGGCTGTA+CGG 0.532686 5:-85836684 MsG0580028749.01.T01:three_prime_UTR
ACTGCAAATTCACCCTTACA+AGG 0.533336 5:+85837030 None:intergenic
TCAAAGGGCATTAAAGCTGC+AGG 0.537663 5:-85838370 MsG0580028749.01.T01:CDS
ATGTCCTTGAGGAAATGGAT+AGG 0.538946 5:-85837478 MsG0580028749.01.T01:CDS
GGATTTGAAATGGATGTTGA+CGG 0.539886 5:+85839444 None:intergenic
CTTGATGCTCACTGATCACA+TGG 0.540039 5:-85838134 MsG0580028749.01.T01:CDS
AAATTTGCCTTTCAAAGAGG+AGG 0.540297 5:-85835449 MsG0580028749.01.T01:three_prime_UTR
TTGGATTGGATTGCATTCAA+AGG 0.540457 5:-85837170 MsG0580028749.01.T01:three_prime_UTR
AAGAATGTGGAAAAGACAAC+TGG 0.541264 5:-85836692 MsG0580028749.01.T01:three_prime_UTR
GATGAATGTGGGATTCGAAA+GGG 0.541844 5:+85839536 None:intergenic
AGCTGCAGTTCTTGAGATGT+CGG 0.544851 5:-85836858 MsG0580028749.01.T01:three_prime_UTR
GTGGTTTGGTATTTGTTCGG+TGG 0.549858 5:+85839416 None:intergenic
ACGGTTTGAGAAATGAAACT+AGG 0.553123 5:+85839463 None:intergenic
CAGATGACACAAAACAATGT+TGG 0.553982 5:-85839723 MsG0580028749.01.T01:CDS
CATCATAATTTATATTGCTG+AGG 0.554019 5:-85837319 MsG0580028749.01.T01:exon
AAGTGGATATATTAGGTGCA+AGG 0.555542 5:+85838080 None:intergenic
TACAAAGCTTACTGGAGTTG+TGG 0.556468 5:-85837416 MsG0580028749.01.T01:CDS
TGTCCTTGAGGAAATGGATA+GGG 0.556871 5:-85837477 MsG0580028749.01.T01:CDS
TTGGGACAAATGTTCAAGCA+TGG 0.557885 5:-85837368 MsG0580028749.01.T01:CDS
GCATGCACATGAGTATTCAA+AGG 0.559247 5:-85838386 MsG0580028749.01.T01:CDS
CATGCACATGAGTATTCAAA+GGG 0.559981 5:-85838385 MsG0580028749.01.T01:CDS
ATCAACAACACATTTAACCA+TGG 0.560049 5:+85837755 None:intergenic
GAAAAGACAACTGGCTGTAC+GGG 0.562405 5:-85836683 MsG0580028749.01.T01:three_prime_UTR
TAACGACCATGGGTATTATG+AGG 0.563678 5:-85837655 MsG0580028749.01.T01:CDS
AATGGATAATGCAATAAATG+AGG 0.564725 5:-85837699 MsG0580028749.01.T01:CDS
TGATGAATGTGGGATTCGAA+AGG 0.564829 5:+85839535 None:intergenic
TGTTTCATTGTTGATGGTGA+AGG 0.566920 5:+85839615 None:intergenic
TGAATACTCATGTGCATGCA+TGG 0.567224 5:+85838390 None:intergenic
ATCTTGCAAGGAAAAGGTAA+AGG 0.570122 5:-85839894 MsG0580028749.01.T01:CDS
TTGCAAGATGTCTGAAATTG+TGG 0.570234 5:+85839908 None:intergenic
GCAACAGAAGGATAGCAAGT+TGG 0.570562 5:+85838190 None:intergenic
GTATTTGCCTATTTGGTGAG+TGG 0.571782 5:+85836976 None:intergenic
CCATGCTCCTCAATACGAGC+AGG 0.573052 5:+85839942 None:intergenic
TACCATCTCAAATAATATGT+AGG 0.578630 5:-85837087 MsG0580028749.01.T01:three_prime_UTR
CCAGACGTTCTGTACTTGCA+GGG 0.579635 5:-85837577 MsG0580028749.01.T01:CDS
GAGATTGGAGGAGTTCATGC+AGG 0.579734 5:-85836638 MsG0580028749.01.T01:three_prime_UTR
AAATAAAATGAATAAAGTAA+AGG 0.580387 5:-85837813 MsG0580028749.01.T01:CDS
TGGGACAAATGTTCAAGCAT+GGG 0.582380 5:-85837367 MsG0580028749.01.T01:CDS
GGAAAAGGTAAAGGTGCTGA+TGG 0.584293 5:-85839885 MsG0580028749.01.T01:CDS
AATAAAAGCATTCCTTGTAA+GGG 0.587576 5:-85837042 MsG0580028749.01.T01:three_prime_UTR
ACAATTTCAGACATCTTGCA+AGG 0.588745 5:-85839906 MsG0580028749.01.T01:CDS
GTTCAAACCTCCAAATCAAG+AGG 0.589014 5:-85839373 MsG0580028749.01.T01:CDS
AAAGGCAACTGGCTGCAACA+AGG 0.589130 5:+85839986 None:intergenic
GAACATGACCTCTGTTGTGA+TGG 0.592961 5:-85836937 MsG0580028749.01.T01:three_prime_UTR
GGTATGCATCAATTTGCTGC+TGG 0.600780 5:-85837066 MsG0580028749.01.T01:three_prime_UTR
TGCTGTTGAGCTATTTAAGG+AGG 0.601828 5:-85838326 MsG0580028749.01.T01:CDS
TGACCCTATCCATTTCCTCA+AGG 0.605293 5:+85837474 None:intergenic
AGAACCGTTGTAACGACCAT+GGG 0.607083 5:-85837665 MsG0580028749.01.T01:CDS
AAATTGGAAAATGAGATTGG+AGG 0.607600 5:-85836650 MsG0580028749.01.T01:three_prime_UTR
AAACGACATGCCAATTATCA+GGG 0.611162 5:-85837870 MsG0580028749.01.T01:CDS
TATTAGACAGCCAAAATGCA+AGG 0.612518 5:-85840083 None:intergenic
GTTGATTAAGCTTTATGCCG+AGG 0.612748 5:-85837738 MsG0580028749.01.T01:CDS
TTGGTGGATATATCTCCACT+TGG 0.613423 5:-85838045 MsG0580028749.01.T01:CDS
CAGAACCGTTGTAACGACCA+TGG 0.617197 5:-85837666 MsG0580028749.01.T01:CDS
TATATCTCCACTTGGATGTG+GGG 0.624895 5:-85838037 MsG0580028749.01.T01:CDS
CCTGCTCGTATTGAGGAGCA+TGG 0.625826 5:-85839942 MsG0580028749.01.T01:CDS
CTTTGGTGGTCGTGAAACCA+GGG 0.626408 5:-85839698 MsG0580028749.01.T01:CDS
ATCATAAACAGTGTCATCTG+TGG 0.626836 5:+85839845 None:intergenic
GAGGTTTGAACAATGAAACA+AGG 0.626928 5:+85839385 None:intergenic
ATTCGTGGTTATGCACACTT+GGG 0.626992 5:-85837941 MsG0580028749.01.T01:CDS
AAGTTTGTCTGAAAAGAATG+TGG 0.627730 5:-85836705 MsG0580028749.01.T01:three_prime_UTR
GTGGATATATTAGGTGCAAG+GGG 0.635069 5:+85838082 None:intergenic
AATACCTCAAGTAAAAGGGA+AGG 0.635615 5:+85839207 None:intergenic
TTGAATGATGTCTCTAGCAG+CGG 0.637321 5:+85836759 None:intergenic
AATACCCATGGTCGTTACAA+CGG 0.638329 5:+85837661 None:intergenic
AGAAATGCAAAATGTCCTTG+AGG 0.641202 5:-85837489 MsG0580028749.01.T01:CDS
TATGCACCTCATAATACCCA+TGG 0.645336 5:+85837649 None:intergenic
ATATTGTACGTAGCAACAGA+AGG 0.649612 5:+85838178 None:intergenic
CATATCACCCCACATCCAAG+TGG 0.651761 5:+85838030 None:intergenic
AATTTGACATCATTAAGCTG+AGG 0.670559 5:+85835190 None:intergenic
GACGTTCTGTACTTGCAGGG+TGG 0.688128 5:-85837574 MsG0580028749.01.T01:CDS
ATCACATTCCATCACAACAG+AGG 0.691952 5:+85836929 None:intergenic
TACGCCGCAAAATCCAAACA+AGG 0.695358 5:-85839493 MsG0580028749.01.T01:CDS
GGTGGTCGTGAAACCAGGGG+AGG 0.700076 5:-85839694 MsG0580028749.01.T01:CDS
TCAAAAGTTGAATATAAACA+GGG 0.701448 5:+85839247 None:intergenic
TTTGGTGGTCGTGAAACCAG+GGG 0.703902 5:-85839697 MsG0580028749.01.T01:CDS
TAGACAGCCAAAATGCAAGG+AGG 0.707266 5:-85840080 None:intergenic
ATGAAACAAGGTCTAAGACG+TGG 0.712810 5:+85839397 None:intergenic
GAATGTGATAGTGAAAATGG+AGG 0.713446 5:-85836915 MsG0580028749.01.T01:three_prime_UTR
GCAACAAGGGATTCACCATG+CGG 0.719382 5:+85840000 None:intergenic
ATCGCACCAAGAAAACACTG+TGG 0.851223 5:-85837445 MsG0580028749.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAAAAAAAAAAAAAA+AGG + Chr5:85839967-85839986 None:intergenic 0.0%
!! AAATAAAATGAATAAAGTAA+AGG - Chr5:85837272-85837291 MsG0580028749.01.T01:three_prime_UTR 10.0%
!! AATTCAAAAAAATTCAATAA+AGG + Chr5:85838540-85838559 None:intergenic 10.0%
!! ACCAATTAAATAATTATAAG+TGG + Chr5:85837025-85837044 None:intergenic 15.0%
!! ACTTATAATTATTTAATTGG+TGG - Chr5:85837024-85837043 MsG0580028749.01.T01:three_prime_UTR 15.0%
!! TAATTATAAGTGGATATATT+AGG + Chr5:85837015-85837034 None:intergenic 15.0%
!! TCCACTTATAATTATTTAAT+TGG - Chr5:85837021-85837040 MsG0580028749.01.T01:three_prime_UTR 15.0%
!!! AATATTGTTATATCTGTTTT+TGG - Chr5:85836925-85836944 MsG0580028749.01.T01:three_prime_UTR 15.0%
!! AATAAGCCATTTATTCAAAT+TGG - Chr5:85836187-85836206 MsG0580028749.01.T01:intron 20.0%
!! ACTTGTTTAACAAACAAATT+TGG + Chr5:85839227-85839246 None:intergenic 20.0%
!! ATAAGCCATTTATTCAAATT+GGG - Chr5:85836188-85836207 MsG0580028749.01.T01:intron 20.0%
!! ATAATAATACCTCAAGTAAA+AGG + Chr5:85835886-85835905 None:intergenic 20.0%
!! CTAAAATAAGTTAATCAAAC+AGG + Chr5:85835994-85836013 None:intergenic 20.0%
!! CTGAATTCAGATTAATATAA+AGG - Chr5:85838785-85838804 MsG0580028749.01.T01:intron 20.0%
!! TAAAACCCAATTTGAATAAA+TGG + Chr5:85836196-85836215 None:intergenic 20.0%
!! TAATAATACCTCAAGTAAAA+GGG + Chr5:85835885-85835904 None:intergenic 20.0%
!! TATATCAGAAACATTATCAA+AGG + Chr5:85838746-85838765 None:intergenic 20.0%
!! TATTATACATTGCAATACAT+AGG - Chr5:85835968-85835987 MsG0580028749.01.T01:intron 20.0%
!! TCAAAAGTTGAATATAAACA+GGG + Chr5:85835841-85835860 None:intergenic 20.0%
!! TCCAAAATATCATTCTTAAT+AGG + Chr5:85839178-85839197 None:intergenic 20.0%
!! TGTATGAAAACATTATATCA+AGG + Chr5:85838681-85838700 None:intergenic 20.0%
!! TGTATTGCAATGTATAATAA+TGG + Chr5:85835967-85835986 None:intergenic 20.0%
!! TGTTAAAAAAATCAACTTTC+AGG - Chr5:85836618-85836637 MsG0580028749.01.T01:three_prime_UTR 20.0%
!! TTATGTAAGTGTATACATAA+GGG - Chr5:85836429-85836448 MsG0580028749.01.T01:intron 20.0%
!! TTCAAAAGTTGAATATAAAC+AGG + Chr5:85835842-85835861 None:intergenic 20.0%
!! TTTATGTAAGTGTATACATA+AGG - Chr5:85836428-85836447 MsG0580028749.01.T01:intron 20.0%
!!! AAATTGGGTTTTAATACTAA+GGG - Chr5:85836203-85836222 MsG0580028749.01.T01:intron 20.0%
!!! AATATATTTGATGATTGGAT+TGG - Chr5:85837896-85837915 MsG0580028749.01.T01:CDS 20.0%
!!! ATTTTGTTATTGAAACCATA+AGG - Chr5:85836128-85836147 MsG0580028749.01.T01:intron 20.0%
!!! CAATTCAACTTTATTTTATC+AGG - Chr5:85836391-85836410 MsG0580028749.01.T01:intron 20.0%
!!! TTAACTTATTTTAGACTGTT+TGG - Chr5:85836000-85836019 MsG0580028749.01.T01:intron 20.0%
!!! TTGCAATTTTTTTATACTGT+CGG - Chr5:85839082-85839101 MsG0580028749.01.T01:intron 20.0%
!!! TTTTGTTATTGAAACCATAA+GGG - Chr5:85836129-85836148 MsG0580028749.01.T01:intron 20.0%
! AATGACAATGATTTATCAAC+AGG - Chr5:85839564-85839583 MsG0580028749.01.T01:CDS 25.0%
! AATGATTTATCAACAGGATT+AGG - Chr5:85839570-85839589 MsG0580028749.01.T01:CDS 25.0%
! AATGGATAATGCAATAAATG+AGG - Chr5:85837386-85837405 MsG0580028749.01.T01:CDS 25.0%
! ACACAAACAAACATTTGTAT+GGG + Chr5:85838845-85838864 None:intergenic 25.0%
! ACAGAACATGTTTATAGATA+CGG + Chr5:85837811-85837830 None:intergenic 25.0%
! ACTTAATTTACATACAGTAC+TGG - Chr5:85839868-85839887 MsG0580028749.01.T01:CDS 25.0%
! CAAAAATGTTTCATTGTTGA+TGG + Chr5:85835479-85835498 None:intergenic 25.0%
! CAAAGATAATACTCTTCTTT+AGG - Chr5:85839745-85839764 MsG0580028749.01.T01:intron 25.0%
! CAGAATTCTGAATATTTGAT+TGG - Chr5:85835809-85835828 MsG0580028749.01.T01:intron 25.0%
! CATCATAATTTATATTGCTG+AGG - Chr5:85837766-85837785 MsG0580028749.01.T01:CDS 25.0%
! CTCAGCAATATAAATTATGA+TGG + Chr5:85837768-85837787 None:intergenic 25.0%
! GAAGAAGAAAAAATGTAGTA+TGG + Chr5:85839715-85839734 None:intergenic 25.0%
! GAATTTAAACAAATCGCTAT+CGG + Chr5:85836525-85836544 None:intergenic 25.0%
! GATGAACAAGAAACTTAATA+TGG + Chr5:85839349-85839368 None:intergenic 25.0%
! GTTGTTAAATAGAAGCTATA+GGG + Chr5:85836559-85836578 None:intergenic 25.0%
! TACCATCTCAAATAATATGT+AGG - Chr5:85837998-85838017 MsG0580028749.01.T01:CDS 25.0%
! TACCTACATATTATTTGAGA+TGG + Chr5:85838003-85838022 None:intergenic 25.0%
! TGAAAATTGGAAAATGAGAT+TGG - Chr5:85838432-85838451 MsG0580028749.01.T01:CDS 25.0%
! TGTTGTTAAATAGAAGCTAT+AGG + Chr5:85836560-85836579 None:intergenic 25.0%
!! AAAGATATATTTGCTGGTAA+AGG - Chr5:85837185-85837204 MsG0580028749.01.T01:three_prime_UTR 25.0%
!! AACAGGTAAGTTTTCATATT+AGG + Chr5:85837120-85837139 None:intergenic 25.0%
!! ATAGCGATTTGTTTAAATTC+TGG - Chr5:85836525-85836544 MsG0580028749.01.T01:intron 25.0%
!! ATTTGTTTGTTAAACAAGTC+AGG - Chr5:85839228-85839247 MsG0580028749.01.T01:CDS 25.0%
!! CATCAACAATGAAACATTTT+TGG - Chr5:85835477-85835496 MsG0580028749.01.T01:three_prime_UTR 25.0%
!! CGTTGAATATATTTGATGAT+TGG - Chr5:85837891-85837910 MsG0580028749.01.T01:CDS 25.0%
!! GCCTATTAAGAATGATATTT+TGG - Chr5:85839174-85839193 MsG0580028749.01.T01:intron 25.0%
!! GTTTAATTTAACGAAAGATG+AGG + Chr5:85838984-85839003 None:intergenic 25.0%
!! TAGATATTTTTCTTGCCAAA+TGG - Chr5:85837958-85837977 MsG0580028749.01.T01:CDS 25.0%
!! TGTTAGGGTTTCATATATTT+TGG - Chr5:85835784-85835803 MsG0580028749.01.T01:intron 25.0%
!!! AAATTGGTAATGCATTTTGT+TGG - Chr5:85835269-85835288 MsG0580028749.01.T01:three_prime_UTR 25.0%
!!! AATAAAAGCATTCCTTGTAA+GGG - Chr5:85838043-85838062 MsG0580028749.01.T01:CDS 25.0%
!!! ACATCATTCAATTTTGATTG+AGG - Chr5:85838338-85838357 MsG0580028749.01.T01:CDS 25.0%
!!! ACTGTTTTAATAAGCTAACT+TGG + Chr5:85836076-85836095 None:intergenic 25.0%
!!! ATCCTTGGTTTTGAAAATAT+TGG - Chr5:85837698-85837717 MsG0580028749.01.T01:CDS 25.0%
!!! CAAATTGGGTTTTAATACTA+AGG - Chr5:85836202-85836221 MsG0580028749.01.T01:intron 25.0%
!!! GCATAATTACAGCTTATTTT+CGG - Chr5:85837454-85837473 MsG0580028749.01.T01:CDS 25.0%
!!! GTTTTTCAAGTGTTAAATTC+AGG - Chr5:85837084-85837103 MsG0580028749.01.T01:three_prime_UTR 25.0%
!!! TAATAAAAGCATTCCTTGTA+AGG - Chr5:85838042-85838061 MsG0580028749.01.T01:CDS 25.0%
!!! TATTTTGCAGCTGATTTTTT+TGG - Chr5:85840071-85840090 MsG0580028749.01.T01:CDS 25.0%
!!! TCCTTGGTTTTGAAAATATT+GGG - Chr5:85837699-85837718 MsG0580028749.01.T01:CDS 25.0%
!!! TGCTGTTTTTATTATTTGTC+TGG + Chr5:85839931-85839950 None:intergenic 25.0%
!!! TGTTTTCAGCTTATTTTCAT+TGG - Chr5:85836046-85836065 MsG0580028749.01.T01:intron 25.0%
!!! TTATTTTAGACTGTTTGGAT+TGG - Chr5:85836005-85836024 MsG0580028749.01.T01:intron 25.0%
!!! TTTTTTCTTCTTCAAGTATC+AGG - Chr5:85839722-85839741 MsG0580028749.01.T01:CDS 25.0%
AAATTGGAAAATGAGATTGG+AGG - Chr5:85838435-85838454 MsG0580028749.01.T01:CDS 30.0%
AAGTTTGTCTGAAAAGAATG+TGG - Chr5:85838380-85838399 MsG0580028749.01.T01:CDS 30.0%
AATTTGACATCATTAAGCTG+AGG + Chr5:85839898-85839917 None:intergenic 30.0%
AGGGGACATTGAAAAATTTA+TGG + Chr5:85839270-85839289 None:intergenic 30.0%
AGTAAAGGAGAGAATAAGAT+AGG + Chr5:85839290-85839309 None:intergenic 30.0%
ATAAGCAGTATACATGTTAC+TGG + Chr5:85840054-85840073 None:intergenic 30.0%
ATCAACAACACATTTAACCA+TGG + Chr5:85837333-85837352 None:intergenic 30.0%
ATGTTCTCATTCAATCTTGA+TGG + Chr5:85838134-85838153 None:intergenic 30.0%
ATTTAAGGAGGCAGAATTTA+AGG - Chr5:85836771-85836790 MsG0580028749.01.T01:three_prime_UTR 30.0%
CAAAAAAATGAATCCTTCTC+CGG - Chr5:85839532-85839551 MsG0580028749.01.T01:CDS 30.0%
CACACAAACAAACATTTGTA+TGG + Chr5:85838846-85838865 None:intergenic 30.0%
CATATCATAACCCTGATAAT+TGG + Chr5:85837228-85837247 None:intergenic 30.0%
CTAAAACTGTAGACAAATTC+AGG + Chr5:85837853-85837872 None:intergenic 30.0%
GAATATCGTTTGATGAATGT+GGG + Chr5:85835563-85835582 None:intergenic 30.0%
GATGGAAAAGATATATTTGC+TGG - Chr5:85837179-85837198 MsG0580028749.01.T01:three_prime_UTR 30.0%
GGGGACATTGAAAAATTTAT+GGG + Chr5:85839269-85839288 None:intergenic 30.0%
GTAAAGGAGAGAATAAGATA+GGG + Chr5:85839289-85839308 None:intergenic 30.0%
TAAACAAGTCAGGATTAATG+TGG - Chr5:85839238-85839257 MsG0580028749.01.T01:CDS 30.0%
TAAAGGAGAGAATAAGATAG+GGG + Chr5:85839288-85839307 None:intergenic 30.0%
TGTAGCTTCTGATTATGTTA+GGG - Chr5:85835769-85835788 MsG0580028749.01.T01:intron 30.0%
TGTTTATGATGCTGTCAAAT+TGG - Chr5:85835253-85835272 MsG0580028749.01.T01:three_prime_UTR 30.0%
TTTAAGGAGGCAGAATTTAA+GGG - Chr5:85836772-85836791 MsG0580028749.01.T01:three_prime_UTR 30.0%
! ATGGAATGTGATAGTGAAAA+TGG - Chr5:85838167-85838186 MsG0580028749.01.T01:CDS 30.0%
! ATTCAATAAAGGCATACCTA+CGG + Chr5:85838529-85838548 None:intergenic 30.0%
! ATTTGATGATTGGATTGGAT+TGG - Chr5:85837901-85837920 MsG0580028749.01.T01:CDS 30.0%
! CTCTTCTTTAGGAATGTTTA+TGG - Chr5:85839756-85839775 MsG0580028749.01.T01:intron 30.0%
! CTGAATTTGTCTACAGTTTT+AGG - Chr5:85837851-85837870 MsG0580028749.01.T01:CDS 30.0%
! CTTTTGTTGACAAATCAGTT+TGG - Chr5:85838708-85838727 MsG0580028749.01.T01:intron 30.0%
! GTTTCTGATATAATTTGTCC+TGG - Chr5:85838754-85838773 MsG0580028749.01.T01:intron 30.0%
! TATGATGGAAATGCATCAAT+GGG + Chr5:85837753-85837772 None:intergenic 30.0%
! TCAACTTTCAGGTGATTAAT+TGG - Chr5:85836629-85836648 MsG0580028749.01.T01:three_prime_UTR 30.0%
! TCCCAATATTTTCAAAACCA+AGG + Chr5:85837703-85837722 None:intergenic 30.0%
! TGCATCAGAACTTTTACAAT+AGG + Chr5:85837253-85837272 None:intergenic 30.0%
! TTATGATGGAAATGCATCAA+TGG + Chr5:85837754-85837773 None:intergenic 30.0%
! TTGTTTGTGTGTGTGTATTT+TGG - Chr5:85838855-85838874 MsG0580028749.01.T01:intron 30.0%
! TTTGTTTCTCGACATGAAAA+AGG - Chr5:85836870-85836889 MsG0580028749.01.T01:three_prime_UTR 30.0%
! TTTTCATATTAGGCTCAACA+GGG + Chr5:85837110-85837129 None:intergenic 30.0%
!! AAGAAGTGCTTCATTGTATA+CGG - Chr5:85840015-85840034 MsG0580028749.01.T01:CDS 30.0%
!! ATAAGTTTTGTGAGACTGTT+TGG - Chr5:85836274-85836293 MsG0580028749.01.T01:intron 30.0%
!! ATGGCTTGTATTCTTTTTCA+GGG + Chr5:85837314-85837333 None:intergenic 30.0%
!! GCTATTTTCACAAGTTATCT+TGG + Chr5:85836353-85836372 None:intergenic 30.0%
!! TACTGTTTCTGTGTTCTTTA+AGG - Chr5:85839989-85840008 MsG0580028749.01.T01:CDS 30.0%
!! TTGCGATCATTTTTGTCAAA+CGG - Chr5:85835029-85835048 MsG0580028749.01.T01:three_prime_UTR 30.0%
!!! ATCTTTTTTGAAGTGTAACC+TGG - Chr5:85839366-85839385 MsG0580028749.01.T01:CDS 30.0%
!!! GTCTACAGTTTTAGGAAAAA+TGG - Chr5:85837859-85837878 MsG0580028749.01.T01:CDS 30.0%
!!! GTCTATGACGTTTTTGTTTT+GGG + Chr5:85838946-85838965 None:intergenic 30.0%
!!! TGAGATTGTTTTTAGTGTCA+AGG - Chr5:85838502-85838521 MsG0580028749.01.T01:intron 30.0%
!!! TTCAATTTTGATTGAGGTGA+TGG - Chr5:85838344-85838363 MsG0580028749.01.T01:CDS 30.0%
AAACGACATGCCAATTATCA+GGG - Chr5:85837215-85837234 MsG0580028749.01.T01:three_prime_UTR 35.0%
AAAGATGAGGATCTCTATCT+GGG + Chr5:85838971-85838990 None:intergenic 35.0%
AAATTTGCCTTTCAAAGAGG+AGG - Chr5:85839636-85839655 MsG0580028749.01.T01:CDS 35.0%
AAGAATGTGGAAAAGACAAC+TGG - Chr5:85838393-85838412 MsG0580028749.01.T01:CDS 35.0%
AAGTGGATATATTAGGTGCA+AGG + Chr5:85837008-85837027 None:intergenic 35.0%
AATACCTCAAGTAAAAGGGA+AGG + Chr5:85835881-85835900 None:intergenic 35.0%
ACAAAACAATGTTGGAGCTT+TGG - Chr5:85835370-85835389 MsG0580028749.01.T01:three_prime_UTR 35.0%
ACAATTTCAGACATCTTGCA+AGG - Chr5:85835179-85835198 MsG0580028749.01.T01:three_prime_UTR 35.0%
ACGGTTTGAGAAATGAAACT+AGG + Chr5:85835625-85835644 None:intergenic 35.0%
ACTTACCTGTTAATGATTCG+TGG - Chr5:85837129-85837148 MsG0580028749.01.T01:three_prime_UTR 35.0%
AGAAATGCAAAATGTCCTTG+AGG - Chr5:85837596-85837615 MsG0580028749.01.T01:CDS 35.0%
AGAACCCATGAAAAACTGAA+GGG + Chr5:85839835-85839854 None:intergenic 35.0%
AGCACTTACAATGCACTAAT+GGG - Chr5:85836808-85836827 MsG0580028749.01.T01:three_prime_UTR 35.0%
AGTGGATATATTAGGTGCAA+GGG + Chr5:85837007-85837026 None:intergenic 35.0%
ATAAGGGCTGAACATGATAA+GGG - Chr5:85836145-85836164 MsG0580028749.01.T01:intron 35.0%
ATATATCTCCACTTGGATGT+GGG - Chr5:85837047-85837066 MsG0580028749.01.T01:three_prime_UTR 35.0%
ATATTGTACGTAGCAACAGA+AGG + Chr5:85836910-85836929 None:intergenic 35.0%
ATCATAAACAGTGTCATCTG+TGG + Chr5:85835243-85835262 None:intergenic 35.0%
ATCCTATCATAAACGATCAC+CGG + Chr5:85839480-85839499 None:intergenic 35.0%
ATCTTGCAAGGAAAAGGTAA+AGG - Chr5:85835191-85835210 MsG0580028749.01.T01:three_prime_UTR 35.0%
ATGGGTGCTTATATGTTCAA+TGG - Chr5:85836826-85836845 MsG0580028749.01.T01:three_prime_UTR 35.0%
ATTTGCAGAGTTGAAGCATA+TGG + Chr5:85839041-85839060 None:intergenic 35.0%
CAGATGACACAAAACAATGT+TGG - Chr5:85835362-85835381 MsG0580028749.01.T01:three_prime_UTR 35.0%
CATAACCACGAATCATTAAC+AGG + Chr5:85837137-85837156 None:intergenic 35.0%
CATGCACATGAGTATTCAAA+GGG - Chr5:85836700-85836719 MsG0580028749.01.T01:three_prime_UTR 35.0%
CCAAAATTTGCCTTTCAAAG+AGG - Chr5:85839633-85839652 MsG0580028749.01.T01:CDS 35.0%
CGAATATCGTTTGATGAATG+TGG + Chr5:85835564-85835583 None:intergenic 35.0%
CTCCTTATATCATTCTAAGC+TGG - Chr5:85837545-85837564 MsG0580028749.01.T01:CDS 35.0%
CTGAAAAAGAATACAAGCCA+TGG - Chr5:85837313-85837332 MsG0580028749.01.T01:three_prime_UTR 35.0%
GACCAGCTTAGAATGATATA+AGG + Chr5:85837550-85837569 None:intergenic 35.0%
GAGATAGATACTTGAAACCA+TGG - Chr5:85839407-85839426 MsG0580028749.01.T01:CDS 35.0%
GAGGTTTGAACAATGAAACA+AGG + Chr5:85835703-85835722 None:intergenic 35.0%
GCTTATTTGACCTTATCTAC+TGG - Chr5:85836247-85836266 MsG0580028749.01.T01:intron 35.0%
GGATAATGTACAAAGCTTAC+TGG - Chr5:85837661-85837680 MsG0580028749.01.T01:CDS 35.0%
GGTATGCAATTCGTTGAATT+TGG + Chr5:85835531-85835550 None:intergenic 35.0%
GTGTAGCTTCTGATTATGTT+AGG - Chr5:85835768-85835787 MsG0580028749.01.T01:intron 35.0%
TAAACGACATGCCAATTATC+AGG - Chr5:85837214-85837233 MsG0580028749.01.T01:three_prime_UTR 35.0%
TACGTAAACACACTAAGCTT+GGG + Chr5:85839315-85839334 None:intergenic 35.0%
TACTAAGGGCTTGTATGTAT+TGG - Chr5:85836217-85836236 MsG0580028749.01.T01:intron 35.0%
TAGAACCCATGAAAAACTGA+AGG + Chr5:85839836-85839855 None:intergenic 35.0%
TGCTCTATCAGAACAATGTT+TGG - Chr5:85838912-85838931 MsG0580028749.01.T01:intron 35.0%
TTACGTAAACACACTAAGCT+TGG + Chr5:85839316-85839335 None:intergenic 35.0%
TTCAAGTATCTATCTCCTGA+TGG + Chr5:85839403-85839422 None:intergenic 35.0%
TTCAGGTGATTAATTGGAGA+AGG - Chr5:85836635-85836654 MsG0580028749.01.T01:three_prime_UTR 35.0%
! AAAACCTTCCCTTTTACTTG+AGG - Chr5:85835874-85835893 MsG0580028749.01.T01:intron 35.0%
! AACGTCTGGTGAATTTTTCA+AGG + Chr5:85837497-85837516 None:intergenic 35.0%
! AGAGGATAAAGTCGCAATTT+TGG - Chr5:85835730-85835749 MsG0580028749.01.T01:intron 35.0%
! CATTATCCACAGTGTTTTCT+TGG + Chr5:85837649-85837668 None:intergenic 35.0%
! CTTGATGGTATTTGCCTATT+TGG + Chr5:85838119-85838138 None:intergenic 35.0%
! GAATGTGATAGTGAAAATGG+AGG - Chr5:85838170-85838189 MsG0580028749.01.T01:CDS 35.0%
! GGACATTTTGCATTTCTCTA+AGG + Chr5:85837593-85837612 None:intergenic 35.0%
! GGATTTGAAATGGATGTTGA+CGG + Chr5:85835644-85835663 None:intergenic 35.0%
! GTTTTCATATTAGGCTCAAC+AGG + Chr5:85837111-85837130 None:intergenic 35.0%
! TATCTTTTTCTGATGCTTGC+AGG - Chr5:85836668-85836687 MsG0580028749.01.T01:three_prime_UTR 35.0%
! TTAGCCCTTCAGTTTTTCAT+GGG - Chr5:85839828-85839847 MsG0580028749.01.T01:intron 35.0%
! TTGCAAGATGTCTGAAATTG+TGG + Chr5:85835180-85835199 None:intergenic 35.0%
! TTGGATTGGATTGCATTCAA+AGG - Chr5:85837915-85837934 MsG0580028749.01.T01:CDS 35.0%
! TTTAGCCCTTCAGTTTTTCA+TGG - Chr5:85839827-85839846 MsG0580028749.01.T01:intron 35.0%
!! AAGACCTTGTTTGGATTTTG+CGG + Chr5:85835599-85835618 None:intergenic 35.0%
!! ACCTTTCCTTTACTGACTTT+GGG + Chr5:85839445-85839464 None:intergenic 35.0%
!! ACTTTATCCTCTTGATTTGG+AGG + Chr5:85835722-85835741 None:intergenic 35.0%
!! CATGGCTTGTATTCTTTTTC+AGG + Chr5:85837315-85837334 None:intergenic 35.0%
!! CCTCTTTGAAAGGCAAATTT+TGG + Chr5:85839636-85839655 None:intergenic 35.0%
!! GCTTGTATGTATTGGCTTAT+TGG - Chr5:85836225-85836244 MsG0580028749.01.T01:intron 35.0%
!! GGTCTATGACGTTTTTGTTT+TGG + Chr5:85838947-85838966 None:intergenic 35.0%
!! TCTTGCTGTTGAGCTATTTA+AGG - Chr5:85836756-85836775 MsG0580028749.01.T01:three_prime_UTR 35.0%
!! TGCGATCATTTTTGTCAAAC+GGG - Chr5:85835030-85835049 MsG0580028749.01.T01:three_prime_UTR 35.0%
!! TGTTTCATTGTTGATGGTGA+AGG + Chr5:85835473-85835492 None:intergenic 35.0%
!!! CATTGTCATTTTTCTAACGC+CGG + Chr5:85839554-85839573 None:intergenic 35.0%
!!! TACGGGTTGCTTTTGAAAAT+TGG - Chr5:85838419-85838438 MsG0580028749.01.T01:CDS 35.0%
AAGTATCTATCTCCTGATGG+TGG + Chr5:85839400-85839419 None:intergenic 40.0%
AATACCCATGGTCGTTACAA+CGG + Chr5:85837427-85837446 None:intergenic 40.0%
ACCCAAAGTCAGTAAAGGAA+AGG - Chr5:85839441-85839460 MsG0580028749.01.T01:CDS 40.0%
ACTGCAAATTCACCCTTACA+AGG + Chr5:85838058-85838077 None:intergenic 40.0%
ACTTATGCTGCCAGTAGATA+AGG + Chr5:85836260-85836279 None:intergenic 40.0%
AGGATAACTGCGTGAACATT+TGG + Chr5:85835453-85835472 None:intergenic 40.0%
ATCACATTCCATCACAACAG+AGG + Chr5:85838159-85838178 None:intergenic 40.0%
ATGTCCTTGAGGAAATGGAT+AGG - Chr5:85837607-85837626 MsG0580028749.01.T01:CDS 40.0%
ATTCGTGGTTATGCACACTT+GGG - Chr5:85837144-85837163 MsG0580028749.01.T01:three_prime_UTR 40.0%
CAGCACTTACAATGCACTAA+TGG - Chr5:85836807-85836826 MsG0580028749.01.T01:three_prime_UTR 40.0%
CATAAGGGCTGAACATGATA+AGG - Chr5:85836144-85836163 MsG0580028749.01.T01:intron 40.0%
CATTAGTGCATTGTAAGTGC+TGG + Chr5:85836809-85836828 None:intergenic 40.0%
CATTCTAAGCTGGTCATGTA+TGG - Chr5:85837555-85837574 MsG0580028749.01.T01:CDS 40.0%
CTGAATTCAGCACAAAAACC+AGG + Chr5:85838775-85838794 None:intergenic 40.0%
CTTATCATGTTCAGCCCTTA+TGG + Chr5:85836146-85836165 None:intergenic 40.0%
GAAAGATGAGGATCTCTATC+TGG + Chr5:85838972-85838991 None:intergenic 40.0%
GATATATCTCCACTTGGATG+TGG - Chr5:85837046-85837065 MsG0580028749.01.T01:three_prime_UTR 40.0%
GATGAATGTGGGATTCGAAA+GGG + Chr5:85835552-85835571 None:intergenic 40.0%
GCAAAATGTCCTTGAGGAAA+TGG - Chr5:85837602-85837621 MsG0580028749.01.T01:CDS 40.0%
GCATGCACATGAGTATTCAA+AGG - Chr5:85836699-85836718 MsG0580028749.01.T01:three_prime_UTR 40.0%
GCGACTTTATCCTCTTGATT+TGG + Chr5:85835725-85835744 None:intergenic 40.0%
GCTGGAATTATTGCAGAAAG+AGG - Chr5:85835425-85835444 MsG0580028749.01.T01:three_prime_UTR 40.0%
GGAAAACTGTTTGGAGGAAA+TGG - Chr5:85837368-85837387 MsG0580028749.01.T01:CDS 40.0%
GTGGATATATTAGGTGCAAG+GGG + Chr5:85837006-85837025 None:intergenic 40.0%
GTTCAAACCTCCAAATCAAG+AGG - Chr5:85835712-85835731 MsG0580028749.01.T01:intron 40.0%
TAACGACCATGGGTATTATG+AGG - Chr5:85837430-85837449 MsG0580028749.01.T01:CDS 40.0%
TACAAAGCTTACTGGAGTTG+TGG - Chr5:85837669-85837688 MsG0580028749.01.T01:CDS 40.0%
TATATCTCCACTTGGATGTG+GGG - Chr5:85837048-85837067 MsG0580028749.01.T01:three_prime_UTR 40.0%
TATCCAAACATGCCCTGAAT+AGG - Chr5:85836497-85836516 MsG0580028749.01.T01:intron 40.0%
TATGCACCTCATAATACCCA+TGG + Chr5:85837439-85837458 None:intergenic 40.0%
TCACATGGAAGCAACATTCA+AGG - Chr5:85836966-85836985 MsG0580028749.01.T01:three_prime_UTR 40.0%
TCAGACATCTTGCAAGGAAA+AGG - Chr5:85835185-85835204 MsG0580028749.01.T01:three_prime_UTR 40.0%
TCCATCTTCTTAGAGTGTGA+TGG - Chr5:85838281-85838300 MsG0580028749.01.T01:CDS 40.0%
TGAATACTCATGTGCATGCA+TGG + Chr5:85836698-85836717 None:intergenic 40.0%
TGATGAATGTGGGATTCGAA+AGG + Chr5:85835553-85835572 None:intergenic 40.0%
TGCTGTTGAGCTATTTAAGG+AGG - Chr5:85836759-85836778 MsG0580028749.01.T01:three_prime_UTR 40.0%
TGGGACAAATGTTCAAGCAT+GGG - Chr5:85837718-85837737 MsG0580028749.01.T01:CDS 40.0%
TGTCCTTGAGGAAATGGATA+GGG - Chr5:85837608-85837627 MsG0580028749.01.T01:CDS 40.0%
TTATGCACACTTGGGTAATC+TGG - Chr5:85837152-85837171 MsG0580028749.01.T01:three_prime_UTR 40.0%
TTATGCCGAGGAAAACTGTT+TGG - Chr5:85837359-85837378 MsG0580028749.01.T01:CDS 40.0%
TTCAACTCTGCAAATTGCAG+AGG - Chr5:85839046-85839065 MsG0580028749.01.T01:intron 40.0%
TTGAATGATGTCTCTAGCAG+CGG + Chr5:85838329-85838348 None:intergenic 40.0%
TTGGGACAAATGTTCAAGCA+TGG - Chr5:85837717-85837736 MsG0580028749.01.T01:CDS 40.0%
! AAACAATGTTGGAGCTTTGG+TGG - Chr5:85835373-85835392 MsG0580028749.01.T01:three_prime_UTR 40.0%
! ACTAGGTCTAAGACCTTGTT+TGG + Chr5:85835608-85835627 None:intergenic 40.0%
! AGGGTGAATTTGCAGTTTTG+AGG - Chr5:85838062-85838081 MsG0580028749.01.T01:CDS 40.0%
! ATGAAACAAGGTCTAAGACG+TGG + Chr5:85835691-85835710 None:intergenic 40.0%
! CAAATGGACTTCTTCAACTG+GGG - Chr5:85837974-85837993 MsG0580028749.01.T01:CDS 40.0%
! CCAAATGGACTTCTTCAACT+GGG - Chr5:85837973-85837992 MsG0580028749.01.T01:CDS 40.0%
! GGTGGATTCTGGATTTGAAA+TGG + Chr5:85835654-85835673 None:intergenic 40.0%
! GTATTTGCCTATTTGGTGAG+TGG + Chr5:85838112-85838131 None:intergenic 40.0%
! GTTGATTAAGCTTTATGCCG+AGG - Chr5:85837347-85837366 MsG0580028749.01.T01:CDS 40.0%
! TTCCTCCAAACAGTTTTCCT+CGG + Chr5:85837367-85837386 None:intergenic 40.0%
! TTGGTGGATATATCTCCACT+TGG - Chr5:85837040-85837059 MsG0580028749.01.T01:three_prime_UTR 40.0%
!! CACCTTTCCTTTACTGACTT+TGG + Chr5:85839446-85839465 None:intergenic 40.0%
!! GACGTGGTTTGGTATTTGTT+CGG + Chr5:85835675-85835694 None:intergenic 40.0%
!! TTGGGTAGTGGAATTATCCA+TGG + Chr5:85839427-85839446 None:intergenic 40.0%
!! TTTTTAGTGTCAAGGTCCGT+AGG - Chr5:85838510-85838529 MsG0580028749.01.T01:intron 40.0%
!!! CTAGCAAATGGTTTTGGATC+AGG + Chr5:85838209-85838228 None:intergenic 40.0%
AGAACCGTTGTAACGACCAT+GGG - Chr5:85837420-85837439 MsG0580028749.01.T01:CDS 45.0%
AGCAGACTCAAACCGTGAAA+AGG + Chr5:85835120-85835139 None:intergenic 45.0%
AGCCGGTGATCGTTTATGAT+AGG - Chr5:85839475-85839494 MsG0580028749.01.T01:CDS 45.0%
AGCTGCAGTTCTTGAGATGT+CGG - Chr5:85838227-85838246 MsG0580028749.01.T01:CDS 45.0%
AGCTTTGCCTCCTCTTTGAA+AGG + Chr5:85839646-85839665 None:intergenic 45.0%
ATCGCACCAAGAAAACACTG+TGG - Chr5:85837640-85837659 MsG0580028749.01.T01:CDS 45.0%
CAAGAACTGCAGCTAGCAAA+TGG + Chr5:85838221-85838240 None:intergenic 45.0%
CACTAAGCTTGGGTCAGTAA+AGG + Chr5:85839305-85839324 None:intergenic 45.0%
CCACTACCCAAAGTCAGTAA+AGG - Chr5:85839436-85839455 MsG0580028749.01.T01:CDS 45.0%
CCCAGTTGAAGAAGTCCATT+TGG + Chr5:85837976-85837995 None:intergenic 45.0%
CTTGATGCTCACTGATCACA+TGG - Chr5:85836951-85836970 MsG0580028749.01.T01:three_prime_UTR 45.0%
CTTGGGTAATCTGGAGAAGA+TGG - Chr5:85837161-85837180 MsG0580028749.01.T01:three_prime_UTR 45.0%
GAAAAGACAACTGGCTGTAC+GGG - Chr5:85838402-85838421 MsG0580028749.01.T01:CDS 45.0%
GAACATGACCTCTGTTGTGA+TGG - Chr5:85838148-85838167 MsG0580028749.01.T01:CDS 45.0%
GATTCGTGGTTATGCACACT+TGG - Chr5:85837143-85837162 MsG0580028749.01.T01:three_prime_UTR 45.0%
GCAACAGAAGGATAGCAAGT+TGG + Chr5:85836898-85836917 None:intergenic 45.0%
GGAAAAGACAACTGGCTGTA+CGG - Chr5:85838401-85838420 MsG0580028749.01.T01:CDS 45.0%
GTTCCTATTCAGGGCATGTT+TGG + Chr5:85836503-85836522 None:intergenic 45.0%
TACGCCGCAAAATCCAAACA+AGG - Chr5:85835592-85835611 MsG0580028749.01.T01:intron 45.0%
TCAAACCGTGAAAAGGCAAC+TGG + Chr5:85835113-85835132 None:intergenic 45.0%
TCAAAGAGGAGGCAAAGCTT+TGG - Chr5:85839647-85839666 MsG0580028749.01.T01:CDS 45.0%
TGACCCTATCCATTTCCTCA+AGG + Chr5:85837614-85837633 None:intergenic 45.0%
! AACGATCACCGGCTAGAATA+TGG + Chr5:85839469-85839488 None:intergenic 45.0%
! ACAAGGTCTAAGACGTGGTT+TGG + Chr5:85835686-85835705 None:intergenic 45.0%
! CATTTTTCTAACGCCGGAGA+AGG + Chr5:85839548-85839567 None:intergenic 45.0%
! CTGCAGCTAGCAAATGGTTT+TGG + Chr5:85838215-85838234 None:intergenic 45.0%
! GCCAAATGGACTTCTTCAAC+TGG - Chr5:85837972-85837991 MsG0580028749.01.T01:CDS 45.0%
! GCCATCACACTCTAAGAAGA+TGG + Chr5:85838285-85838304 None:intergenic 45.0%
! GGTATTTGTTCGGTGGATTC+TGG + Chr5:85835665-85835684 None:intergenic 45.0%
!! AGGCAAAGCTTTGGACTTGA+AGG - Chr5:85839656-85839675 MsG0580028749.01.T01:CDS 45.0%
!! ATCGCTATCGGTTCCTATTC+AGG + Chr5:85836513-85836532 None:intergenic 45.0%
!! CCTTTACTGACTTTGGGTAG+TGG + Chr5:85839439-85839458 None:intergenic 45.0%
!! GAAAGGTGCCATATTCTAGC+CGG - Chr5:85839458-85839477 MsG0580028749.01.T01:CDS 45.0%
!! GGAAAAGGTAAAGGTGCTGA+TGG - Chr5:85835200-85835219 MsG0580028749.01.T01:three_prime_UTR 45.0%
!! GGTATGCATCAATTTGCTGC+TGG - Chr5:85838019-85838038 MsG0580028749.01.T01:CDS 45.0%
!! GTAAAGGTGCTGATGGTTCT+TGG - Chr5:85835207-85835226 MsG0580028749.01.T01:three_prime_UTR 45.0%
!! GTGGTTTGGTATTTGTTCGG+TGG + Chr5:85835672-85835691 None:intergenic 45.0%
!! TCAAAGGGCATTAAAGCTGC+AGG - Chr5:85836715-85836734 MsG0580028749.01.T01:three_prime_UTR 45.0%
!! TCGCTATCGGTTCCTATTCA+GGG + Chr5:85836512-85836531 None:intergenic 45.0%
!!! AATATAAAACTAAATTATTT+TGG + Chr5:85836111-85836130 None:intergenic 5.0%
AAAGGCAACTGGCTGCAACA+AGG + Chr5:85835102-85835121 None:intergenic 50.0%
AAGGCAACTGGCTGCAACAA+GGG + Chr5:85835101-85835120 None:intergenic 50.0%
ACCAGACGTTCTGTACTTGC+AGG - Chr5:85837507-85837526 MsG0580028749.01.T01:CDS 50.0%
ACTCTAGCATACTGAGCAGC+AGG + Chr5:85839609-85839628 None:intergenic 50.0%
CACTTGGATGTGGGGTGATA+TGG - Chr5:85837056-85837075 MsG0580028749.01.T01:three_prime_UTR 50.0%
CAGAACCGTTGTAACGACCA+TGG - Chr5:85837419-85837438 MsG0580028749.01.T01:CDS 50.0%
CATATCACCCCACATCCAAG+TGG + Chr5:85837058-85837077 None:intergenic 50.0%
CCAGACGTTCTGTACTTGCA+GGG - Chr5:85837508-85837527 MsG0580028749.01.T01:CDS 50.0%
CTGGTTTCTTGTCCACCATC+AGG - Chr5:85839385-85839404 MsG0580028749.01.T01:CDS 50.0%
GAACGCACCACTCACCAAAT+AGG - Chr5:85838102-85838121 MsG0580028749.01.T01:CDS 50.0%
GAGATTGGAGGAGTTCATGC+AGG - Chr5:85838447-85838466 MsG0580028749.01.T01:CDS 50.0%
GAGTTGTGGTCAGAGATCCT+TGG - Chr5:85837683-85837702 MsG0580028749.01.T01:CDS 50.0%
GATGAGGATCTCTATCTGGG+AGG + Chr5:85838968-85838987 None:intergenic 50.0%
GCAACAAGGGATTCACCATG+CGG + Chr5:85835088-85835107 None:intergenic 50.0%
GGAGGAGTTCATGCAGGTAA+TGG - Chr5:85838453-85838472 MsG0580028749.01.T01:intron 50.0%
GGGGAGGAGAAATCAATTGC+TGG - Chr5:85835407-85835426 MsG0580028749.01.T01:three_prime_UTR 50.0%
TGCCGAGGAAAACTGTTTGG+AGG - Chr5:85837362-85837381 MsG0580028749.01.T01:CDS 50.0%
TGCTACACCTGCTCGTATTG+AGG - Chr5:85835136-85835155 MsG0580028749.01.T01:three_prime_UTR 50.0%
! CTTTGGTGGTCGTGAAACCA+GGG - Chr5:85835387-85835406 MsG0580028749.01.T01:three_prime_UTR 50.0%
! GCAATTGATTTCTCCTCCCC+TGG + Chr5:85835407-85835426 None:intergenic 50.0%
! GTGCTGATGGTTCTTGGCTT+TGG - Chr5:85835213-85835232 MsG0580028749.01.T01:three_prime_UTR 50.0%
! TGCAGCCAGTTGCCTTTTCA+CGG - Chr5:85835105-85835124 MsG0580028749.01.T01:three_prime_UTR 50.0%
! TGTTTTGCAACGAGTCCGCA+TGG - Chr5:85835070-85835089 MsG0580028749.01.T01:three_prime_UTR 50.0%
! TTTGGTGGTCGTGAAACCAG+GGG - Chr5:85835388-85835407 MsG0580028749.01.T01:three_prime_UTR 50.0%
!! CTGATGGTGGACAAGAAACC+AGG + Chr5:85839387-85839406 None:intergenic 50.0%
CCATGCTCCTCAATACGAGC+AGG + Chr5:85835146-85835165 None:intergenic 55.0%
CCCTGCAAGTACAGAACGTC+TGG + Chr5:85837511-85837530 None:intergenic 55.0%
CCTGCTCGTATTGAGGAGCA+TGG - Chr5:85835143-85835162 MsG0580028749.01.T01:three_prime_UTR 55.0%
GACGTTCTGTACTTGCAGGG+TGG - Chr5:85837511-85837530 MsG0580028749.01.T01:CDS 55.0%
! GCTTTGGTGGTCGTGAAACC+AGG - Chr5:85835386-85835405 MsG0580028749.01.T01:three_prime_UTR 55.0%
GGTGGTCGTGAAACCAGGGG+AGG - Chr5:85835391-85835410 MsG0580028749.01.T01:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 85835017 85840090 85835017 ID=MsG0580028749.01;Name=MsG0580028749.01
Chr5 mRNA 85835017 85840090 85835017 ID=MsG0580028749.01.T01;Parent=MsG0580028749.01;Name=MsG0580028749.01.T01;_AED=0.02;_eAED=0.02;_QI=0|0.66|0.5|1|0.66|0.5|4|1263|640
Chr5 exon 85835017 85835521 85835017 ID=MsG0580028749.01.T01:exon:21622;Parent=MsG0580028749.01.T01
Chr5 exon 85836576 85838467 85836576 ID=MsG0580028749.01.T01:exon:21621;Parent=MsG0580028749.01.T01
Chr5 exon 85839212 85839742 85839212 ID=MsG0580028749.01.T01:exon:21620;Parent=MsG0580028749.01.T01
Chr5 exon 85839833 85840090 85839833 ID=MsG0580028749.01.T01:exon:21619;Parent=MsG0580028749.01.T01
Chr5 CDS 85839833 85840090 85839833 ID=MsG0580028749.01.T01:cds;Parent=MsG0580028749.01.T01
Chr5 CDS 85839212 85839742 85839212 ID=MsG0580028749.01.T01:cds;Parent=MsG0580028749.01.T01
Chr5 CDS 85837334 85838467 85837334 ID=MsG0580028749.01.T01:cds;Parent=MsG0580028749.01.T01
Chr5 three_prime_UTR 85836576 85837333 85836576 ID=MsG0580028749.01.T01:three_prime_utr;Parent=MsG0580028749.01.T01
Chr5 three_prime_UTR 85835017 85835521 85835017 ID=MsG0580028749.01.T01:three_prime_utr;Parent=MsG0580028749.01.T01
Gene Sequence

>MsG0580028749.01.T01

ATGCAAGGAGGATTGCGATCATTTTTGTCAAACGGGAACATCATTAAAAATGCTGTTTTGCAACGAGTCCGCATGGTGAATCCCTTGTTGCAGCCAGTTGCCTTTTCACGGTTTGAGTCTGCTACACCTGCTCGTATTGAGGAGCATGGTTTCGAGAGCACCACAATTTCAGACATCTTGCAAGGAAAAGGTAAAGGTGCTGATGGTTCTTGGCTTTGGTGCACCACAGATGACACTGTTTATGATGCTGTCAAATTGATGACACAAAACAATGTTGGAGCTTTGGTGGTCGTGAAACCAGGGGAGGAGAAATCAATTGCTGGAATTATTGCAGAAAGAGGTACCAAATGTTCACGCAGTTATCCTTCACCATCAACAATGAAACATTTTTGGAGATTCACTTCGAAAGTATCAAAATCTTCCAAATTCAACGAATTGCATACCCTTTCGAATCCCACATTCATCAAACGATATTCGAATTCGAATACGCCGCAAAATCCAAACAAGGTCTTAGACCTAGTTTCATTTCTCAAACCGTCAACATCCATTTCAAATCCAGAATCCACCGAACAAATACCAAACCACGTCTTAGACCTTGTTTCATTGTTCAAACCTCCAAATCAAGAGGATAAAGTCGCAATTTTGGCGAAAGATTTGATTCGTGTAGCTTCTGATTATGTTAGGGTTTCATATATTTTGGATCAGAATTCTGAATATTTGATTGGATCTCACCCTGTTTATATTCAACTTTTGAATCAATTGAATTCAAAACCTTCCCTTTTACTTGAGGTGATTAATTGGAGAAGGAAGCGAAAGCTATCTTTTTCTGATGCTTGCAGGAATTCCATGCATGCACATGAGTATTCAAAGGGCATTAAAGCTGCAGGAAGATGTAAGAATATTGATCTTGCTGTTGAGCTATTTAAGGAGGCAGAATTTAAGGGTGTGAAGATAACCAGCACTTACAATGCACTAATGGGTGCTTATATGTTCAATGGTCTTTCTGATAAATGCTACTCTTTGTTTCTCGACATGAAAAAGGATCCAACTTGCTATCCTTCTGTTGCTACGTACAATATTGTTATATCTGTTTTTGGTCGCTTGATGCTCACTGATCACATGGAAGCAACATTCAAGGAGATGAACGAGTTACCCCTTGCACCTAATATATCCACTTATAATTATTTAATTGGTGGATATATCTCCACTTGGATGTGGGGTGATATGGAGAGAGTTTTTCAAGTGTTAAATTCAGGCCCTGTTGAGCCTAATATGAAAACTTACCTGTTAATGATTCGTGGTTATGCACACTTGGGTAATCTGGAGAAGATGGAAAAGATATATTTGCTGGTAAAGGATAATGTAAACGACATGCCAATTATCAGGGTTATGATATGTGCCTATTGTAAAAGTTCTGATGCAAATAAAATGAATAAAGTAAAGGCGTTGTTAAAGTTGATCCCTGAAAAAGAATACAAGCCATGGTTAAATGTGTTGTTGATTAAGCTTTATGCCGAGGAAAACTGTTTGGAGGAAATGGATAATGCAATAAATGAGGCATTTAAGCGCAGAACCGTTGTAACGACCATGGGTATTATGAGGTGCATAATTACAGCTTATTTTCGGAACAATGCGATAGAAAGCCTTGAAAAATTCACCAGACGTTCTGTACTTGCAGGGTGGAGAATGTGCTACTCCTTATATCATTCTAAGCTGGTCATGTATGGTTCACAAAAGAACCTTAGAGAAATGCAAAATGTCCTTGAGGAAATGGATAGGGTCAACATGCATCGCACCAAGAAAACACTGTGGATAATGTACAAAGCTTACTGGAGTTGTGGTCAGAGATCCTTGGTTTTGAAAATATTGGGACAAATGTTCAAGCATGGGCATGAAGTTCCCATTGATGCATTTCCATCATAA
Protein sequence

>MsG0580028749.01.T01

MQGGLRSFLSNGNIIKNAVLQRVRMVNPLLQPVAFSRFESATPARIEEHGFESTTISDILQGKGKGADGSWLWCTTDDTVYDAVKLMTQNNVGALVVVKPGEEKSIAGIIAERGTKCSRSYPSPSTMKHFWRFTSKVSKSSKFNELHTLSNPTFIKRYSNSNTPQNPNKVLDLVSFLKPSTSISNPESTEQIPNHVLDLVSLFKPPNQEDKVAILAKDLIRVASDYVRVSYILDQNSEYLIGSHPVYIQLLNQLNSKPSLLLEVINWRRKRKLSFSDACRNSMHAHEYSKGIKAAGRCKNIDLAVELFKEAEFKGVKITSTYNALMGAYMFNGLSDKCYSLFLDMKKDPTCYPSVATYNIVISVFGRLMLTDHMEATFKEMNELPLAPNISTYNYLIGGYISTWMWGDMERVFQVLNSGPVEPNMKTYLLMIRGYAHLGNLEKMEKIYLLVKDNVNDMPIIRVMICAYCKSSDANKMNKVKALLKLIPEKEYKPWLNVLLIKLYAEENCLEEMDNAINEAFKRRTVVTTMGIMRCIITAYFRNNAIESLEKFTRRSVLAGWRMCYSLYHSKLVMYGSQKNLREMQNVLEEMDRVNMHRTKKTLWIMYKAYWSCGQRSLVLKILGQMFKHGHEVPIDAFPS*