AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028986.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028986.01.T01 MTR_5g079550 97.067 375 11 0 1 375 1 375 0.0 736
MsG0580028986.01.T01 MTR_3g067685 74.451 364 92 1 12 375 33 395 4.06e-171 483
MsG0580028986.01.T01 MTR_5g069340 47.297 296 152 2 31 324 45 338 2.72e-75 237
MsG0580028986.01.T01 MTR_6g004790 36.996 273 164 4 31 298 13 282 3.72e-45 158
MsG0580028986.01.T01 MTR_1g069845 32.759 290 187 5 11 298 314 597 9.32e-37 140
MsG0580028986.01.T01 MTR_1g069845 33.333 291 184 6 11 298 435 718 1.91e-36 140
MsG0580028986.01.T01 MTR_1g069845 33.333 291 184 6 11 298 431 714 2.42e-36 140
MsG0580028986.01.T01 MTR_1g018180 33.916 286 182 5 14 297 55 335 5.94e-34 129
MsG0580028986.01.T01 MTR_7g097020 33.099 284 182 5 16 297 478 755 1.03e-32 130
MsG0580028986.01.T01 MTR_3g103050 33.451 284 178 6 20 297 51 329 1.33e-32 125
MsG0580028986.01.T01 MTR_3g106140 32.857 280 170 7 30 297 121 394 4.11e-31 124
MsG0580028986.01.T01 MTR_4g063800 31.650 297 189 7 38 326 371 661 6.96e-29 118
MsG0580028986.01.T01 MTR_2g018010 34.276 283 167 9 31 306 407 677 1.06e-28 118
MsG0580028986.01.T01 MTR_3g466220 30.928 291 193 5 9 297 521 805 7.27e-28 115
MsG0580028986.01.T01 MTR_3g466220 30.928 291 193 5 9 297 542 826 7.72e-28 115
MsG0580028986.01.T01 MTR_1g014420 28.533 368 221 10 22 355 130 489 3.11e-27 113
MsG0580028986.01.T01 MTR_7g059405 31.034 261 171 5 38 296 379 632 7.06e-26 109
MsG0580028986.01.T01 MTR_8g080280 32.018 228 145 5 74 297 488 709 2.12e-21 96.7
MsG0580028986.01.T01 MTR_2g026130 29.730 259 137 5 85 302 200 454 2.80e-20 92.4
MsG0580028986.01.T01 MTR_3g085610 32.599 227 142 6 76 298 489 708 1.63e-18 87.8
MsG0580028986.01.T01 MTR_7g078330 28.346 254 143 7 85 300 392 644 3.51e-18 86.7
MsG0580028986.01.T01 MTR_4g485520 28.214 280 156 5 59 297 372 647 1.45e-17 84.7
MsG0580028986.01.T01 MTR_4g485520 28.169 284 151 6 59 297 204 479 2.39e-17 83.6
MsG0580028986.01.T01 MTR_1g094215 27.852 298 165 8 57 314 342 629 1.76e-16 81.3
MsG0580028986.01.T01 MTR_1g094215 27.852 298 165 8 57 314 159 446 2.03e-16 80.9
MsG0580028986.01.T01 MTR_8g077205 27.869 183 127 2 120 302 536 713 9.26e-15 76.3
MsG0580028986.01.T01 MTR_8g077205 27.869 183 127 2 120 302 424 601 9.29e-15 76.3
MsG0580028986.01.T01 MTR_5g034440 27.575 301 193 11 17 298 372 666 3.54e-12 68.2
MsG0580028986.01.T01 MTR_5g020570 24.775 222 121 3 79 299 536 712 1.36e-11 66.6
MsG0580028986.01.T01 MTR_5g020570 24.775 222 121 3 79 299 551 727 1.47e-11 66.2
MsG0580028986.01.T01 MTR_7g053260 25.926 270 182 8 37 296 188 449 1.50e-11 65.9
MsG0580028986.01.T01 MTR_3g078160 24.746 295 205 11 14 300 375 660 4.85e-11 64.7
MsG0580028986.01.T01 MTR_3g078160 24.746 295 205 11 14 300 375 660 4.89e-11 64.7
MsG0580028986.01.T01 MTR_2g015870 23.977 342 244 10 20 355 86 417 5.49e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028986.01.T01 AT3G03440 67.456 338 107 3 20 355 66 402 1.35e-138 401
MsG0580028986.01.T01 AT4G12710 46.111 360 172 7 25 375 53 399 8.19e-81 253
MsG0580028986.01.T01 AT5G14510 35.913 323 181 8 31 340 13 322 6.18e-46 160
MsG0580028986.01.T01 AT3G54790 34.437 302 187 7 2 298 454 749 6.77e-34 133
MsG0580028986.01.T01 AT3G54790 34.437 302 187 7 2 298 454 749 6.77e-34 133
MsG0580028986.01.T01 AT3G54790 34.437 302 187 7 2 298 418 713 7.04e-34 133
MsG0580028986.01.T01 AT3G01400 34.545 275 170 6 28 297 70 339 2.39e-33 127
MsG0580028986.01.T01 AT2G23140 32.028 281 183 5 20 298 354 628 1.64e-32 129
MsG0580028986.01.T01 AT2G23140 32.028 281 183 5 20 298 354 628 1.64e-32 129
MsG0580028986.01.T01 AT2G23140 32.028 281 183 5 20 298 546 820 1.74e-32 129
MsG0580028986.01.T01 AT2G23140 32.028 281 183 5 20 298 543 817 1.84e-32 129
MsG0580028986.01.T01 AT2G23140 32.028 281 183 5 20 298 543 817 1.84e-32 129
MsG0580028986.01.T01 AT5G58680 35.472 265 161 7 37 297 80 338 7.35e-31 120
MsG0580028986.01.T01 AT5G67340 31.650 297 190 7 8 297 407 697 9.49e-31 124
MsG0580028986.01.T01 AT5G67340 31.650 297 190 7 8 297 407 697 9.49e-31 124
MsG0580028986.01.T01 AT2G25130 31.024 332 198 10 41 355 132 449 1.26e-28 116
MsG0580028986.01.T01 AT4G31890 31.054 351 209 13 30 355 150 492 1.40e-27 114
MsG0580028986.01.T01 AT4G31890 31.054 351 209 13 30 355 150 492 1.40e-27 114
MsG0580028986.01.T01 AT4G31890 31.054 351 209 13 30 355 150 492 1.40e-27 114
MsG0580028986.01.T01 AT1G29340 32.390 318 198 10 2 309 389 699 1.26e-25 108
MsG0580028986.01.T01 AT3G46510 31.111 270 179 5 27 294 361 625 3.95e-24 104
MsG0580028986.01.T01 AT1G71020 30.565 301 199 8 4 299 178 473 1.44e-22 99.4
MsG0580028986.01.T01 AT1G71020 30.565 301 199 8 4 299 326 621 1.77e-22 99.8
MsG0580028986.01.T01 AT1G24330 33.188 229 141 7 74 298 486 706 3.63e-22 99.0
MsG0580028986.01.T01 AT1G24330 33.188 229 141 7 74 298 486 706 3.63e-22 99.0
MsG0580028986.01.T01 AT1G67530 31.858 226 149 4 74 298 486 707 3.46e-21 95.9
MsG0580028986.01.T01 AT1G67530 31.858 226 149 4 74 298 486 707 3.46e-21 95.9
MsG0580028986.01.T01 AT1G67530 31.858 226 149 4 74 298 486 707 3.46e-21 95.9
MsG0580028986.01.T01 AT2G28830 29.658 263 170 8 38 293 303 557 2.57e-20 93.2
MsG0580028986.01.T01 AT4G16490 32.283 254 131 8 85 298 210 462 3.23e-20 92.4
MsG0580028986.01.T01 AT1G27910 30.565 301 185 9 12 298 414 704 1.28e-19 91.3
MsG0580028986.01.T01 AT1G60190 27.431 288 194 11 23 298 380 664 3.43e-17 83.6
MsG0580028986.01.T01 AT1G23030 26.523 279 161 3 60 297 333 608 1.73e-16 81.6
MsG0580028986.01.T01 AT5G42340 29.317 249 157 5 59 300 422 658 2.96e-15 77.8
MsG0580028986.01.T01 AT3G07360 26.087 276 190 8 32 299 49 318 1.27e-13 71.6
MsG0580028986.01.T01 AT3G07360 26.087 276 190 8 32 299 49 318 1.27e-13 71.6
MsG0580028986.01.T01 AT3G07360 26.087 276 190 8 32 299 49 318 1.27e-13 71.6
MsG0580028986.01.T01 AT3G07360 26.087 276 190 8 32 299 49 318 1.27e-13 71.6
MsG0580028986.01.T01 AT3G07360 26.087 276 190 8 32 299 49 318 1.27e-13 71.6
MsG0580028986.01.T01 AT3G07360 26.087 276 190 8 32 299 49 318 1.27e-13 71.6
MsG0580028986.01.T01 AT3G07360 26.087 276 190 8 32 299 49 318 1.27e-13 71.6
MsG0580028986.01.T01 AT3G07360 26.087 276 190 8 32 299 49 318 1.27e-13 71.6
MsG0580028986.01.T01 AT3G07360 26.087 276 190 8 32 299 49 318 1.27e-13 71.6
MsG0580028986.01.T01 AT3G07360 26.087 276 190 8 32 299 184 453 2.29e-13 71.6
MsG0580028986.01.T01 AT3G54850 27.208 283 165 8 57 300 344 624 3.91e-13 71.2
MsG0580028986.01.T01 AT1G10560 25.000 280 193 10 31 298 401 675 1.18e-12 69.7

Find 88 sgRNAs with CRISPR-Local

Find 231 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCTGATGTTTCCATTTA+TGG -0.012922 5:-89947628 None:intergenic
AAAGGGTCTATATGTTATTT+TGG 0.186086 5:+89951510 MsG0580028986.01.T01:three_prime_UTR
TTGAGAATGTTAATTATAAA+AGG 0.203810 5:-89950592 None:intergenic
TCTCTCTACAATTCCATAAA+TGG 0.213857 5:+89947615 MsG0580028986.01.T01:exon
ATTACACCTTCTCTTAAAAT+TGG 0.221645 5:-89950829 None:intergenic
GTAGTTGAAGTTCTTGAAAA+TGG 0.241445 5:+89950730 MsG0580028986.01.T01:CDS
GCGGCAACGGTGGGAGGTTT+TGG 0.256441 5:-89947770 None:intergenic
GACTGGTAACTGTTAATAAA+TGG 0.299631 5:+89951442 MsG0580028986.01.T01:three_prime_UTR
CTGCATCAAATTTAGCTTGT+TGG 0.308098 5:-89950501 None:intergenic
ATTGATTGTGATGAACAATT+TGG 0.314648 5:+89951006 MsG0580028986.01.T01:CDS
TCATGTCCTGGTTGTCTAGA+TGG 0.329998 5:-89947714 None:intergenic
ACAGCATGTTCTTTACTTTG+TGG 0.348571 5:-89950757 None:intergenic
AAAGAAGATGTTAGATGAAA+TGG 0.352239 5:+89951035 MsG0580028986.01.T01:CDS
ATCGTGGTGTGTTGATAAAT+TGG 0.358402 5:-89950536 None:intergenic
CTTGTTAACATTCTTAGAAA+TGG 0.359112 5:+89950475 MsG0580028986.01.T01:CDS
AGTTTCTTCTAAATTATAGA+TGG 0.364592 5:+89951152 MsG0580028986.01.T01:exon
GATGTTAGATGAAATGGTTC+AGG 0.367587 5:+89951041 MsG0580028986.01.T01:CDS
ATGTTAATTATAAAAGGAAT+TGG 0.370688 5:-89950586 None:intergenic
GACTTGAGAAAATTAACTAT+TGG 0.372685 5:-89950349 None:intergenic
TGAAATGGTTCAGGTTAGTA+TGG 0.372961 5:+89951050 MsG0580028986.01.T01:CDS
TTAAGAGAAGGTGTAATTCC+AGG 0.376596 5:+89950835 MsG0580028986.01.T01:CDS
AAGTGATAGGTGTAAATATA+AGG 0.393646 5:+89950804 MsG0580028986.01.T01:CDS
GTTTCATAAGAAGTGATGAT+AGG 0.395661 5:-89950442 None:intergenic
TTTGAGACATTTACAACAAA+GGG 0.397976 5:+89951080 MsG0580028986.01.T01:CDS
AGAGAGAGATTGTTTGGGAG+AGG 0.408181 5:-89947595 None:intergenic
CTTCTTGAACTAACTGTTCA+AGG 0.427294 5:+89950859 MsG0580028986.01.T01:CDS
GAGCTGACGGCGGCAACGGT+GGG 0.427818 5:-89947779 None:intergenic
AATCATCTATATTGCATTTG+CGG 0.428901 5:+89951347 MsG0580028986.01.T01:three_prime_UTR
AAGCGAGAAGAGCAGGTTCA+TGG 0.438444 5:-89947855 None:intergenic
TTAAGCAAAGCGAGAAGAGC+AGG 0.456226 5:-89947862 None:intergenic
AGAAGTGATGATAGGTTTGT+TGG 0.456578 5:-89950434 None:intergenic
GTCGGAGCTGACGGCGGCAA+CGG 0.465996 5:-89947783 None:intergenic
TGCTAGTCCAGGCCATGTAT+AGG 0.466023 5:+89951411 MsG0580028986.01.T01:three_prime_UTR
GAGCGGTTGTTGGTTGAGAA+AGG 0.468482 5:-89947525 None:intergenic
TCGTTGGTTGATTATGAAGA+AGG 0.471079 5:+89950667 MsG0580028986.01.T01:CDS
GGTGAGACGGCGGATGTCCT+TGG 0.472052 5:-89947749 None:intergenic
GATATGCAAGTGAGTAGTAA+AGG 0.476290 5:+89951492 MsG0580028986.01.T01:three_prime_UTR
CTAAGAATGTTAACAAGAAG+AGG 0.478084 5:-89950469 None:intergenic
CTCATATGTTTATGCAATTG+TGG 0.480966 5:-89951543 None:intergenic
GGAGCTGACGGCGGCAACGG+TGG 0.480999 5:-89947780 None:intergenic
ACATATAGAGGAGCGGTTGT+TGG 0.483724 5:-89947535 None:intergenic
ACAGTTAGTTCAAGAAGTCC+TGG 0.496327 5:-89950853 None:intergenic
AAAATCAACATTGTGGAAGC+TGG 0.496822 5:+89950316 MsG0580028986.01.T01:CDS
CGGCGAGTCGACTCGGAGCA+TGG 0.499529 5:-89947827 None:intergenic
CTTGATACCTATACATGGCC+TGG 0.500611 5:-89951418 None:intergenic
TGAGAATGTGTCAAAGTGAT+AGG 0.502922 5:+89950791 MsG0580028986.01.T01:CDS
ATATGCAAGTGAGTAGTAAA+GGG 0.507605 5:+89951493 MsG0580028986.01.T01:three_prime_UTR
AGCTAAATTTGATGCAGTAA+TGG 0.513034 5:+89950507 MsG0580028986.01.T01:CDS
TTTATGCAATTGTGGAAATG+AGG 0.521708 5:-89951535 None:intergenic
AAAATACATCGGTGTCCGTA+CGG 0.522554 5:+89947674 MsG0580028986.01.T01:CDS
GTTTCGTTAACATCTGAAGA+AGG 0.526842 5:+89950694 MsG0580028986.01.T01:CDS
CAGTTATAATTATAAGAGAA+AGG 0.527183 5:-89947562 None:intergenic
TGATAGCTTGTCGGAGCTGA+CGG 0.529449 5:-89947792 None:intergenic
GAATTCTCCTCCAACGTTGG+AGG 0.533444 5:+89947648 MsG0580028986.01.T01:CDS
ATCTTTCTCTAGTGTGAAGG+TGG 0.540758 5:+89951188 MsG0580028986.01.T01:three_prime_UTR
GAAACAAGATGTGAAATTGA+AGG 0.542971 5:+89950943 MsG0580028986.01.T01:CDS
CAAGTGGAGTGATAGCTTGT+CGG 0.546028 5:-89947801 None:intergenic
CTGACGGCGGCAACGGTGGG+AGG 0.546037 5:-89947776 None:intergenic
CTGCGGTTTGATAGAGTCGT+TGG 0.546780 5:+89950651 MsG0580028986.01.T01:CDS
GGGACTCCGGCGAGTCGACT+CGG 0.547737 5:-89947834 None:intergenic
GAGAAAGGAGACACATATAG+AGG 0.549679 5:-89947547 None:intergenic
AGCGAGAAGAGCAGGTTCAT+GGG 0.550587 5:-89947854 None:intergenic
ATGTATAGGTATCAAGTGAC+TGG 0.553336 5:+89951425 MsG0580028986.01.T01:three_prime_UTR
GTTTGAGACATTTACAACAA+AGG 0.558448 5:+89951079 MsG0580028986.01.T01:CDS
CATGAAAATTCAAGCTGCCA+AGG 0.559951 5:+89947732 MsG0580028986.01.T01:CDS
TTGATTCTAGTATAGTGTTG+AGG 0.561677 5:-89950561 None:intergenic
GGTGTCCGTACGGAGAGCCT+TGG 0.564506 5:+89947684 MsG0580028986.01.T01:CDS
CAAAGTAAAGAACATGCTGT+TGG 0.565163 5:+89950760 MsG0580028986.01.T01:CDS
AGAGAATTCTCCTCCAACGT+TGG 0.567821 5:+89947645 MsG0580028986.01.T01:CDS
TAGCTCCAAGGCTCTCCGTA+CGG 0.581754 5:-89947689 None:intergenic
CATGCTCCGAGTCGACTCGC+CGG 0.588162 5:+89947828 MsG0580028986.01.T01:CDS
GTCTAGATGGAGTAGCTCCA+AGG 0.590622 5:-89947701 None:intergenic
TAGGAACAAAATCAACATTG+TGG 0.594415 5:+89950309 MsG0580028986.01.T01:intron
TAAATCTTTCTCTAGTGTGA+AGG 0.598890 5:+89951185 MsG0580028986.01.T01:three_prime_UTR
AGAGCAGGTTCATGGGACTC+CGG 0.613573 5:-89947847 None:intergenic
TCTTTCTCTAGTGTGAAGGT+GGG 0.620285 5:+89951189 MsG0580028986.01.T01:three_prime_UTR
AGTCACTTGATACCTATACA+TGG 0.627885 5:-89951423 None:intergenic
GCTACTCCATCTAGACAACC+AGG 0.631363 5:+89947708 MsG0580028986.01.T01:CDS
TTATGCAATTGTGGAAATGA+GGG 0.631617 5:-89951534 None:intergenic
ACTCGGAGCATGGAAACAAG+TGG 0.637558 5:-89947817 None:intergenic
AGTAATAGACACATCACTTG+TGG 0.644947 5:-89951115 None:intergenic
TAGCTTGTCGGAGCTGACGG+CGG 0.656502 5:-89947789 None:intergenic
TCTTCTATAATATTAACTCG+CGG 0.660749 5:-89951371 None:intergenic
GTATAGTGTTGAGGTTATCG+TGG 0.661903 5:-89950552 None:intergenic
TCGTTAACATCTGAAGAAGG+CGG 0.676522 5:+89950697 MsG0580028986.01.T01:CDS
AGGAGACACATATAGAGGAG+CGG 0.681186 5:-89947542 None:intergenic
TATGCAATTGTGGAAATGAG+GGG 0.707507 5:-89951533 None:intergenic
GTTGGAGGATCAAAATACAT+CGG 0.708112 5:+89947663 MsG0580028986.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAATGTATAAATAAA+GGG - Chr5:89948896-89948915 None:intergenic 10.0%
!! CAATATATTAATATTGTTTA+AGG - Chr5:89948397-89948416 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - Chr5:89948897-89948916 None:intergenic 10.0%
!!! TAATTGTATTTTAATAAAGT+TGG + Chr5:89948436-89948455 MsG0580028986.01.T01:intron 10.0%
!! AAAATTGTGTCAATTAAATT+GGG + Chr5:89948932-89948951 MsG0580028986.01.T01:intron 15.0%
!! AAACATAATAACATACAATA+TGG + Chr5:89948643-89948662 MsG0580028986.01.T01:intron 15.0%
!! AATAAAAAAGGAAGATAAAA+AGG + Chr5:89951222-89951241 MsG0580028986.01.T01:three_prime_UTR 15.0%
!! AATTTGAAAAAAAAGTCATT+TGG - Chr5:89949505-89949524 None:intergenic 15.0%
!! ACAGTTTATCAATTAATAAT+TGG + Chr5:89948988-89949007 MsG0580028986.01.T01:intron 15.0%
!! ACTAATATAAGGAATATATA+AGG - Chr5:89948567-89948586 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - Chr5:89948895-89948914 None:intergenic 15.0%
!! ATAAGCATATCTATTTATAT+AGG + Chr5:89948484-89948503 MsG0580028986.01.T01:intron 15.0%
!! ATGTTAATTATAAAAGGAAT+TGG - Chr5:89950589-89950608 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - Chr5:89948831-89948850 None:intergenic 15.0%
!! GGAAAATAAAAGAATAAAAA+AGG + Chr5:89951210-89951229 MsG0580028986.01.T01:three_prime_UTR 15.0%
!! TAAATAATCACAATTAAGAA+AGG - Chr5:89948462-89948481 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - Chr5:89948832-89948851 None:intergenic 15.0%
!! TTGAGAATGTTAATTATAAA+AGG - Chr5:89950595-89950614 None:intergenic 15.0%
!!! ATAACATTCATTTTTTTTGA+AGG - Chr5:89948622-89948641 None:intergenic 15.0%
!!! GACAAATTTTTCTTTTAAAA+AGG + Chr5:89949285-89949304 MsG0580028986.01.T01:intron 15.0%
!!! TAATTTGAACCTTTTTTTAT+AGG + Chr5:89950290-89950309 MsG0580028986.01.T01:intron 15.0%
!!! TAGTAGGTTTAAAATAAATA+TGG + Chr5:89949568-89949587 MsG0580028986.01.T01:intron 15.0%
!!! TTTTTGCTATTCAATTTTAA+AGG + Chr5:89947950-89947969 MsG0580028986.01.T01:intron 15.0%
!! AAAGTGGAATATATTGTATT+GGG - Chr5:89948872-89948891 None:intergenic 20.0%
!! AAATGAGTTATAATCAATCA+TGG + Chr5:89949981-89950000 MsG0580028986.01.T01:intron 20.0%
!! AAATTGAAGACACTAATATA+AGG - Chr5:89948578-89948597 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - Chr5:89948799-89948818 None:intergenic 20.0%
!! AGTTTCTTCTAAATTATAGA+TGG + Chr5:89951152-89951171 MsG0580028986.01.T01:exon 20.0%
!! ATGATATATTCTCTTATCAT+TGG + Chr5:89950042-89950061 MsG0580028986.01.T01:intron 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG + Chr5:89948931-89948950 MsG0580028986.01.T01:intron 20.0%
!! CAGTTATAATTATAAGAGAA+AGG - Chr5:89947565-89947584 None:intergenic 20.0%
!! CTAAAATTAAGCCTATAAAA+TGG - Chr5:89949424-89949443 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - Chr5:89948798-89948817 None:intergenic 20.0%
!! TGGAATTAAAATAATCTCAT+TGG - Chr5:89949099-89949118 None:intergenic 20.0%
!!! AAAGGTTCTTATTTTCTATA+TGG - Chr5:89947510-89947529 None:intergenic 20.0%
!!! AAATAAACCATCCATTTTAT+AGG + Chr5:89949410-89949429 MsG0580028986.01.T01:intron 20.0%
!!! AAATGAAGAGTAAATTGTTT+TGG + Chr5:89949602-89949621 MsG0580028986.01.T01:intron 20.0%
!!! AGACACTTTTTTTTAGAAAA+TGG - Chr5:89948763-89948782 None:intergenic 20.0%
!!! ATAATGTATTAACTTGAAAG+TGG - Chr5:89949680-89949699 None:intergenic 20.0%
!!! ATTTTTCTAAGATGTTACAA+AGG + Chr5:89949329-89949348 MsG0580028986.01.T01:intron 20.0%
!!! ATTTTTTATCTTTAACTCTC+CGG - Chr5:89948293-89948312 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - Chr5:89948762-89948781 None:intergenic 20.0%
!!! GATTTTGTTCCTATAAAAAA+AGG - Chr5:89950302-89950321 None:intergenic 20.0%
!!! TAATGTATTAACTTGAAAGT+GGG - Chr5:89949679-89949698 None:intergenic 20.0%
!!! TTTCTTTTATCAAAAGCAAT+TGG - Chr5:89949811-89949830 None:intergenic 20.0%
!!! TTTTTGAAGTAATCTAGTAA+TGG + Chr5:89949940-89949959 MsG0580028986.01.T01:intron 20.0%
! AAAGAAGATGTTAGATGAAA+TGG + Chr5:89951035-89951054 MsG0580028986.01.T01:CDS 25.0%
! AAGTGATAGGTGTAAATATA+AGG + Chr5:89950804-89950823 MsG0580028986.01.T01:CDS 25.0%
! AATAAGCCTAACTTATAACT+AGG + Chr5:89949757-89949776 MsG0580028986.01.T01:intron 25.0%
! AATCATCTATATTGCATTTG+CGG + Chr5:89951347-89951366 MsG0580028986.01.T01:three_prime_UTR 25.0%
! AATTAAGCCTATAAAATGGA+TGG - Chr5:89949420-89949439 None:intergenic 25.0%
! ATTAAATCCCTTGAAATGAT+CGG - Chr5:89948136-89948155 None:intergenic 25.0%
! ATTACACCTTCTCTTAAAAT+TGG - Chr5:89950832-89950851 None:intergenic 25.0%
! ATTGATTGTGATGAACAATT+TGG + Chr5:89951006-89951025 MsG0580028986.01.T01:CDS 25.0%
! CTTGTTAACATTCTTAGAAA+TGG + Chr5:89950475-89950494 MsG0580028986.01.T01:CDS 25.0%
! GAAAGTGGAATATATTGTAT+TGG - Chr5:89948873-89948892 None:intergenic 25.0%
! GACTTGAGAAAATTAACTAT+TGG - Chr5:89950352-89950371 None:intergenic 25.0%
! GAGTATAGAAAATTTGAGTA+TGG - Chr5:89949839-89949858 None:intergenic 25.0%
! GGTTAATAGTTATCTAGTAA+TGG + Chr5:89949909-89949928 MsG0580028986.01.T01:intron 25.0%
! TAGTAATACGAAATTCAACT+AGG - Chr5:89948251-89948270 None:intergenic 25.0%
! TCAAAAGCAATTGGTATAAA+AGG - Chr5:89949802-89949821 None:intergenic 25.0%
! TCTTCTATAATATTAACTCG+CGG - Chr5:89951374-89951393 None:intergenic 25.0%
!! AATGTATTAACTTGAAAGTG+GGG - Chr5:89949678-89949697 None:intergenic 25.0%
!! AGCATTTTCATGCAATATAA+AGG - Chr5:89951279-89951298 None:intergenic 25.0%
!! ATGCAATATAGATGATTTTG+AGG - Chr5:89951344-89951363 None:intergenic 25.0%
!! TTTCCTTTCTCTTTTTCTTT+TGG + Chr5:89949862-89949881 MsG0580028986.01.T01:intron 25.0%
!! TTTGAGACATTTACAACAAA+GGG + Chr5:89951080-89951099 MsG0580028986.01.T01:CDS 25.0%
!!! AAAGGGTCTATATGTTATTT+TGG + Chr5:89951510-89951529 MsG0580028986.01.T01:three_prime_UTR 25.0%
!!! ATAGGCTTAATTTTAGAAGA+TGG + Chr5:89949428-89949447 MsG0580028986.01.T01:intron 25.0%
!!! ATAGTTATCTAGTAATGGAT+AGG + Chr5:89949914-89949933 MsG0580028986.01.T01:intron 25.0%
!!! ATCATTGATTTGAGATTAGA+CGG + Chr5:89950159-89950178 MsG0580028986.01.T01:intron 25.0%
!!! ATTGCTATTGATTTGTTGAA+GGG + Chr5:89948413-89948432 MsG0580028986.01.T01:intron 25.0%
!!! ATTGGATGGTTGTTTTTATT+AGG + Chr5:89949036-89949055 MsG0580028986.01.T01:intron 25.0%
!!! TATTGCTATTGATTTGTTGA+AGG + Chr5:89948412-89948431 MsG0580028986.01.T01:intron 25.0%
!!! TCTCCGGTTTTTTTTTATAA+GGG - Chr5:89948277-89948296 None:intergenic 25.0%
!!! TTGCTATTCAATTTTAAAGG+AGG + Chr5:89947953-89947972 MsG0580028986.01.T01:intron 25.0%
AATCAGAAATGTGTGTAGAT+CGG + Chr5:89950220-89950239 MsG0580028986.01.T01:intron 30.0%
AATCTTATGTCCATAACACA+GGG + Chr5:89948050-89948069 MsG0580028986.01.T01:intron 30.0%
ACAAAGCCTAGTTATAAGTT+AGG - Chr5:89949766-89949785 None:intergenic 30.0%
ACACATTAAATGTGTAATGC+AGG - Chr5:89950197-89950216 None:intergenic 30.0%
AGCTAAATTTGATGCAGTAA+TGG + Chr5:89950507-89950526 MsG0580028986.01.T01:CDS 30.0%
ATAGTTAAAAATGCTAGTCC+AGG + Chr5:89951400-89951419 MsG0580028986.01.T01:three_prime_UTR 30.0%
ATATGCAAGTGAGTAGTAAA+GGG + Chr5:89951493-89951512 MsG0580028986.01.T01:three_prime_UTR 30.0%
CACAATGCATTAGTTAATCT+CGG + Chr5:89950074-89950093 MsG0580028986.01.T01:intron 30.0%
CGACCCTTATAAAAAAAAAC+CGG + Chr5:89948271-89948290 MsG0580028986.01.T01:intron 30.0%
CTAAGAATGTTAACAAGAAG+AGG - Chr5:89950472-89950491 None:intergenic 30.0%
CTCATATGTTTATGCAATTG+TGG - Chr5:89951546-89951565 None:intergenic 30.0%
CTTGTGAATTGTGATATAGT+AGG + Chr5:89949552-89949571 MsG0580028986.01.T01:intron 30.0%
GAAACAAGATGTGAAATTGA+AGG + Chr5:89950943-89950962 MsG0580028986.01.T01:CDS 30.0%
GACTGGTAACTGTTAATAAA+TGG + Chr5:89951442-89951461 MsG0580028986.01.T01:three_prime_UTR 30.0%
GAGACTAAGCTCTTATTATT+GGG + Chr5:89948174-89948193 MsG0580028986.01.T01:intron 30.0%
GCTTTCAAATTGAGAATCAT+TGG - Chr5:89949710-89949729 None:intergenic 30.0%
GTAGTTGAAGTTCTTGAAAA+TGG + Chr5:89950730-89950749 MsG0580028986.01.T01:CDS 30.0%
GTTTCATAAGAAGTGATGAT+AGG - Chr5:89950445-89950464 None:intergenic 30.0%
TAAATCTTTCTCTAGTGTGA+AGG + Chr5:89951185-89951204 MsG0580028986.01.T01:three_prime_UTR 30.0%
TAACATTCAATCAGTGTGTA+AGG + Chr5:89949469-89949488 MsG0580028986.01.T01:intron 30.0%
TACACAAAATTCTTAACCGT+TGG - Chr5:89948011-89948030 None:intergenic 30.0%
TAGGAACAAAATCAACATTG+TGG + Chr5:89950309-89950328 MsG0580028986.01.T01:intron 30.0%
TCTCTCTACAATTCCATAAA+TGG + Chr5:89947615-89947634 MsG0580028986.01.T01:exon 30.0%
TGTATAAATAAAGGGGAAAG+TGG - Chr5:89948888-89948907 None:intergenic 30.0%
TTATGCAATTGTGGAAATGA+GGG - Chr5:89951537-89951556 None:intergenic 30.0%
TTCTCTGATGTTTCCATTTA+TGG - Chr5:89947631-89947650 None:intergenic 30.0%
TTGATTCTAGTATAGTGTTG+AGG - Chr5:89950564-89950583 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG + Chr5:89948936-89948955 MsG0580028986.01.T01:intron 30.0%
TTTATGCAATTGTGGAAATG+AGG - Chr5:89951538-89951557 None:intergenic 30.0%
! GTTTGAGACATTTACAACAA+AGG + Chr5:89951079-89951098 MsG0580028986.01.T01:CDS 30.0%
! TACACACTGATTGAATGTTA+GGG - Chr5:89949469-89949488 None:intergenic 30.0%
! TTACACACTGATTGAATGTT+AGG - Chr5:89949470-89949489 None:intergenic 30.0%
!! AAGGAACCAATTTTAAGAGA+AGG + Chr5:89950823-89950842 MsG0580028986.01.T01:CDS 30.0%
!! ACTTATAACTAGGCTTTGTT+TGG + Chr5:89949767-89949786 MsG0580028986.01.T01:intron 30.0%
!! GAAGTAATCTAGTAATGGAT+AGG + Chr5:89949945-89949964 MsG0580028986.01.T01:intron 30.0%
!! GATAAAAAGGTATTGAATCG+TGG + Chr5:89951235-89951254 MsG0580028986.01.T01:three_prime_UTR 30.0%
!! TTGGTTTGCTAATTGTTACT+TGG + Chr5:89949621-89949640 MsG0580028986.01.T01:intron 30.0%
!!! CTCTCCGGTTTTTTTTTATA+AGG - Chr5:89948278-89948297 None:intergenic 30.0%
!!! GGAACAATTTTTGTTGTTGA+TGG + Chr5:89948352-89948371 MsG0580028986.01.T01:intron 30.0%
!!! TATCGATTTTCTCCTCAATT+GGG + Chr5:89948324-89948343 MsG0580028986.01.T01:intron 30.0%
!!! TTATCGATTTTCTCCTCAAT+TGG + Chr5:89948323-89948342 MsG0580028986.01.T01:intron 30.0%
AAAACAGCTGAAAAATGCTG+CGG + Chr5:89950634-89950653 MsG0580028986.01.T01:CDS 35.0%
AAAATCAACATTGTGGAAGC+TGG + Chr5:89950316-89950335 MsG0580028986.01.T01:CDS 35.0%
ACAGCATGTTCTTTACTTTG+TGG - Chr5:89950760-89950779 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - Chr5:89948749-89948768 None:intergenic 35.0%
AGAAGTGATGATAGGTTTGT+TGG - Chr5:89950437-89950456 None:intergenic 35.0%
AGTAATAGACACATCACTTG+TGG - Chr5:89951118-89951137 None:intergenic 35.0%
AGTCACTTGATACCTATACA+TGG - Chr5:89951426-89951445 None:intergenic 35.0%
ATCATTCTCCGATCATTTCA+AGG + Chr5:89948125-89948144 MsG0580028986.01.T01:intron 35.0%
ATGGAATCCAACCTAGATAA+GGG + Chr5:89949203-89949222 MsG0580028986.01.T01:intron 35.0%
ATGTATAGGTATCAAGTGAC+TGG + Chr5:89951425-89951444 MsG0580028986.01.T01:three_prime_UTR 35.0%
CAAAGTAAAGAACATGCTGT+TGG + Chr5:89950760-89950779 MsG0580028986.01.T01:CDS 35.0%
CGAGACTAAGCTCTTATTAT+TGG + Chr5:89948173-89948192 MsG0580028986.01.T01:intron 35.0%
CTAGGAGAAAAAGTTTCAGA+GGG + Chr5:89949888-89949907 MsG0580028986.01.T01:intron 35.0%
CTTCTTGAACTAACTGTTCA+AGG + Chr5:89950859-89950878 MsG0580028986.01.T01:CDS 35.0%
GAATCTTATGTCCATAACAC+AGG + Chr5:89948049-89948068 MsG0580028986.01.T01:intron 35.0%
GATATGCAAGTGAGTAGTAA+AGG + Chr5:89951492-89951511 MsG0580028986.01.T01:three_prime_UTR 35.0%
GATGTTAGATGAAATGGTTC+AGG + Chr5:89951041-89951060 MsG0580028986.01.T01:CDS 35.0%
GGACCAAAAGAAAAAGAGAA+AGG - Chr5:89949868-89949887 None:intergenic 35.0%
GTTAGGCTTATTTGACTGAA+TGG - Chr5:89949749-89949768 None:intergenic 35.0%
GTTGGAGGATCAAAATACAT+CGG + Chr5:89947663-89947682 MsG0580028986.01.T01:CDS 35.0%
GTTTCGTTAACATCTGAAGA+AGG + Chr5:89950694-89950713 MsG0580028986.01.T01:CDS 35.0%
TAGAGAGAGAGAGATTGTTT+GGG - Chr5:89947603-89947622 None:intergenic 35.0%
TATGCAATTGTGGAAATGAG+GGG - Chr5:89951536-89951555 None:intergenic 35.0%
TATGGAATCCAACCTAGATA+AGG + Chr5:89949202-89949221 MsG0580028986.01.T01:intron 35.0%
TCATTCTCCGATCATTTCAA+GGG + Chr5:89948126-89948145 MsG0580028986.01.T01:intron 35.0%
TCTCGGCTACTAATTTAGAT+CGG + Chr5:89950091-89950110 MsG0580028986.01.T01:intron 35.0%
TGAGAATGTGTCAAAGTGAT+AGG + Chr5:89950791-89950810 MsG0580028986.01.T01:CDS 35.0%
TTGGATTCCATAATTGTGCA+GGG - Chr5:89949194-89949213 None:intergenic 35.0%
TTTGTCAGTTTCCCTTATCT+AGG - Chr5:89949217-89949236 None:intergenic 35.0%
! ATCGTGGTGTGTTGATAAAT+TGG - Chr5:89950539-89950558 None:intergenic 35.0%
! TCGTTGGTTGATTATGAAGA+AGG + Chr5:89950667-89950686 MsG0580028986.01.T01:CDS 35.0%
! TGAAATGGTTCAGGTTAGTA+TGG + Chr5:89951050-89951069 MsG0580028986.01.T01:CDS 35.0%
! TTAAGAGAAGGTGTAATTCC+AGG + Chr5:89950835-89950854 MsG0580028986.01.T01:CDS 35.0%
!! AACTGCAATTTTGATCGCAT+TGG - Chr5:89951303-89951322 None:intergenic 35.0%
!! CTGCATCAAATTTAGCTTGT+TGG - Chr5:89950504-89950523 None:intergenic 35.0%
!! TCTAGTAATGGATAGGTTGT+TGG + Chr5:89949952-89949971 MsG0580028986.01.T01:intron 35.0%
!!! CTCTGAAACTTTTTCTCCTA+GGG - Chr5:89949889-89949908 None:intergenic 35.0%
!!! GCATTTTTCAGCTGTTTTTG+AGG - Chr5:89950632-89950651 None:intergenic 35.0%
ACAGTTAGTTCAAGAAGTCC+TGG - Chr5:89950856-89950875 None:intergenic 40.0%
AGAAATGTGTGTAGATCGGT+CGG + Chr5:89950224-89950243 MsG0580028986.01.T01:intron 40.0%
AGAAGATGGTTCATGACTTG+AGG + Chr5:89949442-89949461 MsG0580028986.01.T01:intron 40.0%
ATCTTTCTCTAGTGTGAAGG+TGG + Chr5:89951188-89951207 MsG0580028986.01.T01:three_prime_UTR 40.0%
CATGAAAATTCAAGCTGCCA+AGG + Chr5:89947732-89947751 MsG0580028986.01.T01:CDS 40.0%
CCTAGGAGAAAAAGTTTCAG+AGG + Chr5:89949887-89949906 MsG0580028986.01.T01:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG - Chr5:89948748-89948767 None:intergenic 40.0%
GAATCATCTTCCCTGTGTTA+TGG - Chr5:89948063-89948082 None:intergenic 40.0%
GACAGTTGAAGCTCATCAAT+TGG + Chr5:89949018-89949037 MsG0580028986.01.T01:intron 40.0%
GAGAAAGGAGACACATATAG+AGG - Chr5:89947550-89947569 None:intergenic 40.0%
GGCTACTAATTTAGATCGGT+CGG + Chr5:89950095-89950114 MsG0580028986.01.T01:intron 40.0%
GTAGAGAGAGAGAGATTGTT+TGG - Chr5:89947604-89947623 None:intergenic 40.0%
GTATAGTTGCAGCAAAGTCA+TGG - Chr5:89949119-89949138 None:intergenic 40.0%
GTTGAAGCTCATCAATTGGA+TGG + Chr5:89949022-89949041 MsG0580028986.01.T01:intron 40.0%
GTTGGATTCCATAATTGTGC+AGG - Chr5:89949195-89949214 None:intergenic 40.0%
TCAGTTTCCCTTATCTAGGT+TGG - Chr5:89949213-89949232 None:intergenic 40.0%
TCGTTAACATCTGAAGAAGG+CGG + Chr5:89950697-89950716 MsG0580028986.01.T01:CDS 40.0%
TCTTTCTCTAGTGTGAAGGT+GGG + Chr5:89951189-89951208 MsG0580028986.01.T01:three_prime_UTR 40.0%
TGTCAATTAAATTGGGACGG+AGG + Chr5:89948939-89948958 MsG0580028986.01.T01:intron 40.0%
! AAAATACATCGGTGTCCGTA+CGG + Chr5:89947674-89947693 MsG0580028986.01.T01:CDS 40.0%
! AAATCCTGTTGACTAGAACC+TGG + Chr5:89949167-89949186 MsG0580028986.01.T01:intron 40.0%
! ACTTTTCATCTTGAACAGCG+AGG - Chr5:89947888-89947907 None:intergenic 40.0%
! CAGCTTGAATTTTCATGTCC+TGG - Chr5:89947729-89947748 None:intergenic 40.0%
! CTCTTTTTCTTTTGGTCCCT+AGG + Chr5:89949870-89949889 MsG0580028986.01.T01:intron 40.0%
! GTATAGTGTTGAGGTTATCG+TGG - Chr5:89950555-89950574 None:intergenic 40.0%
!! GGTTCTAGTCAACAGGATTT+TGG - Chr5:89949167-89949186 None:intergenic 40.0%
!!! CCTCTGAAACTTTTTCTCCT+AGG - Chr5:89949890-89949909 None:intergenic 40.0%
!!! GTATTTTGATCCTCCAACGT+TGG - Chr5:89947661-89947680 None:intergenic 40.0%
ACATATAGAGGAGCGGTTGT+TGG - Chr5:89947538-89947557 None:intergenic 45.0%
AGAGAATTCTCCTCCAACGT+TGG + Chr5:89947645-89947664 MsG0580028986.01.T01:CDS 45.0%
AGAGAGAGATTGTTTGGGAG+AGG - Chr5:89947598-89947617 None:intergenic 45.0%
AGGAGACACATATAGAGGAG+CGG - Chr5:89947545-89947564 None:intergenic 45.0%
CTTGATACCTATACATGGCC+TGG - Chr5:89951421-89951440 None:intergenic 45.0%
GATGAGACGAGTTACACCAA+CGG + Chr5:89947992-89948011 MsG0580028986.01.T01:intron 45.0%
TCATGTCCTGGTTGTCTAGA+TGG - Chr5:89947717-89947736 None:intergenic 45.0%
TTAAGCAAAGCGAGAAGAGC+AGG - Chr5:89947865-89947884 None:intergenic 45.0%
TTGTTCCAGCATCCCAATTG+AGG - Chr5:89948339-89948358 None:intergenic 45.0%
TTTCTCCTCAATTGGGATGC+TGG + Chr5:89948331-89948350 MsG0580028986.01.T01:intron 45.0%
! ACGGAGGTATAGTACTAGCT+TGG + Chr5:89948955-89948974 MsG0580028986.01.T01:intron 45.0%
! CAAGTGGAGTGATAGCTTGT+CGG - Chr5:89947804-89947823 None:intergenic 45.0%
! TTTTGATCCTCCAACGTTGG+AGG - Chr5:89947658-89947677 None:intergenic 45.0%
!!! TAAGATATATTTTAATAAAA+TGG + Chr5:89951574-89951593 MsG0580028986.01.T01:three_prime_UTR 5.0%
AAGCGAGAAGAGCAGGTTCA+TGG - Chr5:89947858-89947877 None:intergenic 50.0%
ACCTGGACCCTGCACAATTA+TGG + Chr5:89949184-89949203 MsG0580028986.01.T01:intron 50.0%
ACTCGGAGCATGGAAACAAG+TGG - Chr5:89947820-89947839 None:intergenic 50.0%
AGCGAGAAGAGCAGGTTCAT+GGG - Chr5:89947857-89947876 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - Chr5:89948744-89948763 None:intergenic 50.0%
ATGTGTGTAGATCGGTCGGT+CGG + Chr5:89950228-89950247 MsG0580028986.01.T01:intron 50.0%
CTGCGGTTTGATAGAGTCGT+TGG + Chr5:89950651-89950670 MsG0580028986.01.T01:CDS 50.0%
GAATTCTCCTCCAACGTTGG+AGG + Chr5:89947648-89947667 MsG0580028986.01.T01:CDS 50.0%
GCTACTCCATCTAGACAACC+AGG + Chr5:89947708-89947727 MsG0580028986.01.T01:CDS 50.0%
GTCTAGATGGAGTAGCTCCA+AGG - Chr5:89947704-89947723 None:intergenic 50.0%
TCCATAATTGTGCAGGGTCC+AGG - Chr5:89949188-89949207 None:intergenic 50.0%
TGCTAGTCCAGGCCATGTAT+AGG + Chr5:89951411-89951430 MsG0580028986.01.T01:three_prime_UTR 50.0%
TGGTGTAACTCGTCTCATCG+TGG - Chr5:89947991-89948010 None:intergenic 50.0%
TTCATATACTCCCTCCGTCC+CGG + Chr5:89948727-89948746 MsG0580028986.01.T01:intron 50.0%
! GAGCGGTTGTTGGTTGAGAA+AGG - Chr5:89947528-89947547 None:intergenic 50.0%
! TGATAGCTTGTCGGAGCTGA+CGG - Chr5:89947795-89947814 None:intergenic 50.0%
AGAGCAGGTTCATGGGACTC+CGG - Chr5:89947850-89947869 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG - Chr5:89948740-89948759 None:intergenic 55.0%
TAGCTCCAAGGCTCTCCGTA+CGG - Chr5:89947692-89947711 None:intergenic 55.0%
! GGGTCCAGGTTCTAGTCAAC+AGG - Chr5:89949174-89949193 None:intergenic 55.0%
!! GGTGGGAGGTTTTGGTGAGA+CGG - Chr5:89947765-89947784 None:intergenic 55.0%
GGTCAGTTATTCCGGGACGG+AGG - Chr5:89948741-89948760 None:intergenic 60.0%
! TAGCTTGTCGGAGCTGACGG+CGG - Chr5:89947792-89947811 None:intergenic 60.0%
!! GGGAGGTTTTGGTGAGACGG+CGG - Chr5:89947762-89947781 None:intergenic 60.0%
GGTGAGACGGCGGATGTCCT+TGG - Chr5:89947752-89947771 None:intergenic 65.0%
GGTGTCCGTACGGAGAGCCT+TGG + Chr5:89947684-89947703 MsG0580028986.01.T01:CDS 65.0%
! GCGGCAACGGTGGGAGGTTT+TGG - Chr5:89947773-89947792 None:intergenic 65.0%
!! CATGCTCCGAGTCGACTCGC+CGG + Chr5:89947828-89947847 MsG0580028986.01.T01:CDS 65.0%
GAGCTGACGGCGGCAACGGT+GGG - Chr5:89947782-89947801 None:intergenic 70.0%
GGGACTCCGGCGAGTCGACT+CGG - Chr5:89947837-89947856 None:intergenic 70.0%
GTCGGAGCTGACGGCGGCAA+CGG - Chr5:89947786-89947805 None:intergenic 70.0%
!! CGGCGAGTCGACTCGGAGCA+TGG - Chr5:89947830-89947849 None:intergenic 70.0%
CTGACGGCGGCAACGGTGGG+AGG - Chr5:89947779-89947798 None:intergenic 75.0%
GGAGCTGACGGCGGCAACGG+TGG - Chr5:89947783-89947802 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 89947479 89951600 89947479 ID=MsG0580028986.01;Name=MsG0580028986.01
Chr5 mRNA 89947479 89951600 89947479 ID=MsG0580028986.01.T01;Parent=MsG0580028986.01;Name=MsG0580028986.01.T01;_AED=0.38;_eAED=0.38;_QI=155|1|1|1|1|1|2|430|376
Chr5 exon 89947479 89947905 89947479 ID=MsG0580028986.01.T01:exon:17547;Parent=MsG0580028986.01.T01
Chr5 exon 89950312 89951600 89950312 ID=MsG0580028986.01.T01:exon:17548;Parent=MsG0580028986.01.T01
Chr5 five_prime_UTR 89947479 89947633 89947479 ID=MsG0580028986.01.T01:five_prime_utr;Parent=MsG0580028986.01.T01
Chr5 CDS 89947634 89947905 89947634 ID=MsG0580028986.01.T01:cds;Parent=MsG0580028986.01.T01
Chr5 CDS 89950312 89951170 89950312 ID=MsG0580028986.01.T01:cds;Parent=MsG0580028986.01.T01
Chr5 three_prime_UTR 89951171 89951600 89951171 ID=MsG0580028986.01.T01:three_prime_utr;Parent=MsG0580028986.01.T01
Gene Sequence

>MsG0580028986.01.T01

ATGGAAACATCAGAGAATTCTCCTCCAACGTTGGAGGATCAAAATACATCGGTGTCCGTACGGAGAGCCTTGGAGCTACTCCATCTAGACAACCAGGACATGAAAATTCAAGCTGCCAAGGACATCCGCCGTCTCACCAAAACCTCCCACCGTTGCCGCCGTCAGCTCCGACAAGCTATCACTCCACTTGTTTCCATGCTCCGAGTCGACTCGCCGGAGTCCCATGAACCTGCTCTTCTCGCTTTGCTTAACCTCGCTGTTCAAGATGAAAAGAACAAAATCAACATTGTGGAAGCTGGTGCATTAGAACCAATAGTTAATTTTCTCAAGTCACAAAATCAAAATCTACAAGAGTATGCAACTGCATCATTGCTCACTCTATCAGCATCAACAACCAACAAACCTATCATCACTTCTTATGAAACAATTCCTCTTCTTGTTAACATTCTTAGAAATGGAAGCCAACAAGCTAAATTTGATGCAGTAATGGCTCTATCCAATTTATCAACACACCACGATAACCTCAACACTATACTAGAATCAAATCCAATTCCTTTTATAATTAACATTCTCAAAACATGTAAAAAGTCCTCAAAAACAGCTGAAAAATGCTGCGGTTTGATAGAGTCGTTGGTTGATTATGAAGAAGGAATAGTTTCGTTAACATCTGAAGAAGGCGGTGTTCTTGCAGTAGTTGAAGTTCTTGAAAATGGAAAACCACAAAGTAAAGAACATGCTGTTGGAACATTGTTGAGAATGTGTCAAAGTGATAGGTGTAAATATAAGGAACCAATTTTAAGAGAAGGTGTAATTCCAGGACTTCTTGAACTAACTGTTCAAGGAACAACAAAGTCTAGAGCAAAAGCATGTACTCTTTTGCAGCTACTAAGAGATTCTGATGTTGAAACAAGATGTGAAATTGAAGGTGAGACTCTTGAGAACATAGTGTATGATATTATATCTCAGATTGATTGTGATGAACAATTTGGTAAAGCAAAGAAGATGTTAGATGAAATGGTTCAGGTTAGTATGGAACAAAGTTTGAGACATTTACAACAAAGGGCTCTTGTTTCTACCACAAGTGATGTGTCTATTACTAGTTGTGCTTCTGAAGTTTCTTCTAAATTATAG
Protein sequence

>MsG0580028986.01.T01

METSENSPPTLEDQNTSVSVRRALELLHLDNQDMKIQAAKDIRRLTKTSHRCRRQLRQAITPLVSMLRVDSPESHEPALLALLNLAVQDEKNKINIVEAGALEPIVNFLKSQNQNLQEYATASLLTLSASTTNKPIITSYETIPLLVNILRNGSQQAKFDAVMALSNLSTHHDNLNTILESNPIPFIINILKTCKKSSKTAEKCCGLIESLVDYEEGIVSLTSEEGGVLAVVEVLENGKPQSKEHAVGTLLRMCQSDRCKYKEPILREGVIPGLLELTVQGTTKSRAKACTLLQLLRDSDVETRCEIEGETLENIVYDIISQIDCDEQFGKAKKMLDEMVQVSMEQSLRHLQQRALVSTTSDVSITSCASEVSSKL*