AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029024.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 80 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTCAGCTATATTTAATT+TGG 0.162893 5:+90552969 MsG0580029024.01.T01:three_prime_UTR
TTAGGATGGACTCAGAATTT+TGG 0.199644 5:-90552847 None:intergenic
CATAATGCCAACAATTATTT+AGG 0.201132 5:-90552865 None:intergenic
AACATCTTATATTCATATTA+TGG 0.224956 5:-90552898 None:intergenic
CATAATTTGTTTGACCTTCA+TGG 0.235938 5:-90551402 None:intergenic
AAGAGTCTAACAAATGTTTA+TGG 0.244028 5:-90553078 None:intergenic
GGCTCCAACAGAAGACTTTC+CGG 0.249401 5:+90551114 MsG0580029024.01.T01:CDS
GTTCTTTATGTGCCCAAGTA+TGG 0.260453 5:+90552991 MsG0580029024.01.T01:three_prime_UTR
AAACATTTGTTAGACTCTTT+AGG 0.304968 5:+90553082 MsG0580029024.01.T01:three_prime_UTR
CGTGGAGCACTTTCACCCTT+TGG 0.323096 5:+90548582 MsG0580029024.01.T01:CDS
CACTATATTCTCTTTGAAGT+TGG 0.351703 5:+90551338 MsG0580029024.01.T01:three_prime_UTR
GCGCTACCATATGCATATTC+TGG 0.367972 5:-90551520 None:intergenic
CACAACTTAATTAAATGCTT+AGG 0.369941 5:+90553019 MsG0580029024.01.T01:three_prime_UTR
CTGAAACGAATCGGGTTAAC+GGG 0.383710 5:-90548712 None:intergenic
TCTGAAACGAATCGGGTTAA+CGG 0.387603 5:-90548713 None:intergenic
AATGTTCCATTTCTGAGAAC+AGG 0.390299 5:+90548625 MsG0580029024.01.T01:CDS
GAAGACTTTCCGGTTGTTGA+TGG 0.399086 5:+90551124 MsG0580029024.01.T01:CDS
GGAGATGCAATTGATTTGTC+TGG 0.409728 5:+90551041 MsG0580029024.01.T01:CDS
ATCCACCACTGGAAGTGTTT+CGG 0.414615 5:+90551896 MsG0580029024.01.T01:three_prime_UTR
ACAACTTAATTAAATGCTTA+GGG 0.423685 5:+90553020 MsG0580029024.01.T01:three_prime_UTR
GATGAACCTGTTCTCAGAAA+TGG 0.433514 5:-90548631 None:intergenic
AATCGGGTTAACGGGTAAAA+CGG 0.443399 5:-90548704 None:intergenic
AAGTTGTGGTGAGCCATACT+TGG 0.448422 5:-90553004 None:intergenic
AAGAAGCTTCTGAAACGAAT+CGG 0.453654 5:-90548721 None:intergenic
ATTCTCTTTGAAGTTGGAAA+AGG 0.453775 5:+90551344 MsG0580029024.01.T01:three_prime_UTR
TGGAAAAGGCAGTGTTATCA+AGG 0.453828 5:+90551358 MsG0580029024.01.T01:three_prime_UTR
AGTCCATCCTAAATAATTGT+TGG 0.454120 5:+90552858 MsG0580029024.01.T01:three_prime_UTR
ACAGGTTCATCGGACGCATA+TGG 0.462902 5:+90548643 MsG0580029024.01.T01:CDS
AAGGTCATGGAAAGGGTAAA+GGG 0.465345 5:+90552761 MsG0580029024.01.T01:three_prime_UTR
AGGCAGTGTTATCAAGGCTT+GGG 0.482839 5:+90551364 MsG0580029024.01.T01:three_prime_UTR
ATAATATGAATATAAGATGT+TGG 0.487393 5:+90552900 MsG0580029024.01.T01:three_prime_UTR
ATCGGGTTAACGGGTAAAAC+GGG 0.490680 5:-90548703 None:intergenic
AAGCGAAACTTGATGCAAAA+AGG 0.492946 5:+90552742 MsG0580029024.01.T01:three_prime_UTR
GGTGAAAGTGCTCCACGCGC+AGG 0.494566 5:-90548576 None:intergenic
TAATATGAATATAAGATGTT+GGG 0.495725 5:+90552901 MsG0580029024.01.T01:three_prime_UTR
AAGGCAGTGTTATCAAGGCT+TGG 0.496931 5:+90551363 MsG0580029024.01.T01:three_prime_UTR
AAAGGTCATGGAAAGGGTAA+AGG 0.502733 5:+90552760 MsG0580029024.01.T01:three_prime_UTR
GGGTAAAGGGAAAGCAAAGT+AGG 0.504881 5:+90552774 MsG0580029024.01.T01:three_prime_UTR
ATGCCAACAATTATTTAGGA+TGG 0.507152 5:-90552861 None:intergenic
CCACGTAAGGGATCCACCAC+TGG 0.507640 5:+90551885 MsG0580029024.01.T01:three_prime_UTR
TGCAAGCCAGAATATGCATA+TGG 0.510797 5:+90551514 MsG0580029024.01.T01:three_prime_UTR
GCCAGCATACCATCAACAAC+CGG 0.512292 5:-90551133 None:intergenic
AGAAGCTTCTGAAACGAATC+GGG 0.525573 5:-90548720 None:intergenic
CTCCGAAACACTTCCAGTGG+TGG 0.529940 5:-90551898 None:intergenic
CTAAGCATTTAATTAAGTTG+TGG 0.535703 5:-90553018 None:intergenic
AGATGTTGGGTAGCTTGCTA+TGG 0.536074 5:+90552914 MsG0580029024.01.T01:three_prime_UTR
TGAAGCACACTTGCTGATAC+CGG 0.537762 5:+90551285 MsG0580029024.01.T01:exon
TGGAAGTGTTTCGGAGGAGA+GGG 0.539417 5:+90551905 MsG0580029024.01.T01:three_prime_UTR
ATTTCTGAGAACAGGTTCAT+CGG 0.542310 5:+90548633 MsG0580029024.01.T01:CDS
CTGGAAGTGTTTCGGAGGAG+AGG 0.558627 5:+90551904 MsG0580029024.01.T01:three_prime_UTR
TAAGAATAGAAGAATCCAAA+GGG 0.563202 5:-90548597 None:intergenic
GAGATGCAATTGATTTGTCT+GGG 0.564430 5:+90551042 MsG0580029024.01.T01:CDS
GAATATGCATATGGTAGCGC+GGG 0.565328 5:+90551523 MsG0580029024.01.T01:three_prime_UTR
GTGAAAGTGCTCCACGCGCA+GGG 0.568284 5:-90548575 None:intergenic
GCAATTGATTTGTCTGGGGA+TGG 0.569056 5:+90551047 MsG0580029024.01.T01:CDS
AGTTGTGGTGAGCCATACTT+GGG 0.569262 5:-90553003 None:intergenic
AGTTGCGTGTAGGCCACGTA+AGG 0.569562 5:+90551872 MsG0580029024.01.T01:three_prime_UTR
GATTGCTGCTGCAGCCAAAG+AGG 0.571392 5:+90552670 MsG0580029024.01.T01:three_prime_UTR
CAAATCAATTGCATCTCCCA+TGG 0.571536 5:-90551036 None:intergenic
CTCCTCCGAAACACTTCCAG+TGG 0.578804 5:-90551901 None:intergenic
AAGTTGAGCTAGTTGCGTGT+AGG 0.580977 5:+90551862 MsG0580029024.01.T01:three_prime_UTR
ACAACCGGAAAGTCTTCTGT+TGG 0.590797 5:-90551118 None:intergenic
TGCTGCTGCAGCCAAAGAGG+AGG 0.601337 5:+90552673 MsG0580029024.01.T01:three_prime_UTR
GGTAAAGGGAAAGCAAAGTA+GGG 0.606494 5:+90552775 MsG0580029024.01.T01:three_prime_UTR
TTAAGAATAGAAGAATCCAA+AGG 0.607570 5:-90548598 None:intergenic
AAATGAGATAAGTACTCTGG+GGG 0.613016 5:-90551562 None:intergenic
CTGACTGCTCTTCCTCACAA+TGG 0.615992 5:-90551084 None:intergenic
GGAAGAGCAGTCAGATGCTG+TGG 0.622353 5:+90551093 MsG0580029024.01.T01:CDS
TGTAGTGTCAAAGACTTCAC+CGG 0.624464 5:-90551304 None:intergenic
ACACGCGTGGACCCTGCGCG+TGG 0.636514 5:+90548564 MsG0580029024.01.T01:CDS
CATTGCAGTCAAAACCATGA+AGG 0.637732 5:+90551388 MsG0580029024.01.T01:three_prime_UTR
AGAATATGCATATGGTAGCG+CGG 0.640782 5:+90551522 MsG0580029024.01.T01:three_prime_UTR
CACCACTGGAAGTGTTTCGG+AGG 0.643350 5:+90551899 MsG0580029024.01.T01:three_prime_UTR
ATTGATTTGTCTGGGGATGG+CGG 0.647042 5:+90551050 MsG0580029024.01.T01:CDS
CCAGTGGTGGATCCCTTACG+TGG 0.650777 5:-90551885 None:intergenic
GTTGCGTGTAGGCCACGTAA+GGG 0.673867 5:+90551873 MsG0580029024.01.T01:three_prime_UTR
AGATGCAATTGATTTGTCTG+GGG 0.680840 5:+90551043 MsG0580029024.01.T01:CDS
GAGTCATCAAGACCATTGTG+AGG 0.709231 5:+90551072 MsG0580029024.01.T01:CDS
TGGAGCGTATAGCACACGCG+TGG 0.730044 5:+90548551 None:intergenic
AATGAGATAAGTACTCTGGG+GGG 0.751884 5:-90551561 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCTAAACAATAAAATAA+AGG - Chr5:90548842-90548861 None:intergenic 10.0%
!! AATCTAAACAATAAAATAAA+GGG - Chr5:90548841-90548860 None:intergenic 10.0%
!!! ATCACTTTTTTATTTTATTA+AGG + Chr5:90551963-90551982 MsG0580029024.01.T01:intron 10.0%
!!! GTTTTTTTAATCAAAATAAT+TGG - Chr5:90551594-90551613 None:intergenic 10.0%
!!! TTAAAGATTTTGATAATTAA+TGG - Chr5:90551639-90551658 None:intergenic 10.0%
!!! TTATCAAAATCTTTAATTTA+AGG + Chr5:90551643-90551662 MsG0580029024.01.T01:intron 10.0%
!! AACATCTTATATTCATATTA+TGG - Chr5:90552901-90552920 None:intergenic 15.0%
!! AACTTGAATCATTTAAATAA+TGG + Chr5:90551434-90551453 MsG0580029024.01.T01:intron 15.0%
!! ACATAGTATTAAATTATGTT+TGG + Chr5:90550813-90550832 MsG0580029024.01.T01:intron 15.0%
!! AGAAGATAAAAACATAAAAA+TGG - Chr5:90549364-90549383 None:intergenic 15.0%
!! ATAATATGAATATAAGATGT+TGG + Chr5:90552900-90552919 MsG0580029024.01.T01:three_prime_UTR 15.0%
!! ATTAGTTAATAATAGCAATT+TGG - Chr5:90552305-90552324 None:intergenic 15.0%
!! TAATATGAATATAAGATGTT+GGG + Chr5:90552901-90552920 MsG0580029024.01.T01:three_prime_UTR 15.0%
!! TGCTATTATTAACTAATATT+AGG + Chr5:90552308-90552327 MsG0580029024.01.T01:intron 15.0%
!! TTACTAAAAAACCTTATATT+AGG - Chr5:90551750-90551769 None:intergenic 15.0%
!! TTTACATTATATCAATCAAA+AGG - Chr5:90550085-90550104 None:intergenic 15.0%
!!! ATGTTTTTTTTTTTAATTGC+AGG + Chr5:90550042-90550061 MsG0580029024.01.T01:intron 15.0%
!!! TAAATTGTTATTCTCTTTTT+GGG + Chr5:90550641-90550660 MsG0580029024.01.T01:intron 15.0%
!!! TATTAAAAAGTTTTTCTGTT+TGG + Chr5:90552575-90552594 MsG0580029024.01.T01:intron 15.0%
!!! TTAAATTGTTATTCTCTTTT+TGG + Chr5:90550640-90550659 MsG0580029024.01.T01:intron 15.0%
!!! TTTTTAAGTTTATGAATGAT+GGG + Chr5:90548926-90548945 MsG0580029024.01.T01:intron 15.0%
!! AAAAAACATAAAAATGGATC+AGG - Chr5:90550031-90550050 None:intergenic 20.0%
!! AAAGTTCAAAATTACTAAAG+AGG - Chr5:90550595-90550614 None:intergenic 20.0%
!! AAGTTCAAAATTACTAAAGA+GGG - Chr5:90550594-90550613 None:intergenic 20.0%
!! ACAACTTAATTAAATGCTTA+GGG + Chr5:90553020-90553039 MsG0580029024.01.T01:three_prime_UTR 20.0%
!! ACATAAAAAAACCATTATTG+TGG + Chr5:90549884-90549903 MsG0580029024.01.T01:intron 20.0%
!! ACTCAAAAACATTAATAAGT+GGG - Chr5:90549517-90549536 None:intergenic 20.0%
!! CATTTCAGCTATATTTAATT+TGG + Chr5:90552969-90552988 MsG0580029024.01.T01:three_prime_UTR 20.0%
!! TAAAAACATAAAAATGGATC+AGG - Chr5:90549358-90549377 None:intergenic 20.0%
!! TACTCAAAAACATTAATAAG+TGG - Chr5:90549518-90549537 None:intergenic 20.0%
!!! CTTTTTAAGTTTATGAATGA+TGG + Chr5:90548925-90548944 MsG0580029024.01.T01:intron 20.0%
!!! TTATTTTTGTTAGTCAATGA+AGG + Chr5:90551994-90552013 MsG0580029024.01.T01:intron 20.0%
!!! TTGTTTAGATTTGATTTTCT+TGG + Chr5:90548850-90548869 MsG0580029024.01.T01:intron 20.0%
!!! TTTATTTTATTAAGGTTGAG+TGG + Chr5:90551971-90551990 MsG0580029024.01.T01:intron 20.0%
! AAAACAGTTATTCTAGCAAA+AGG - Chr5:90548878-90548897 None:intergenic 25.0%
! AAAATAAAGGGAATTAACGA+GGG - Chr5:90548829-90548848 None:intergenic 25.0%
! AAACAGTTATTCTAGCAAAA+GGG - Chr5:90548877-90548896 None:intergenic 25.0%
! AAGAGTCTAACAAATGTTTA+TGG - Chr5:90553081-90553100 None:intergenic 25.0%
! ACAACTCAAATCAAAATCAT+AGG - Chr5:90549655-90549674 None:intergenic 25.0%
! ATCTCTATTAAAAACTCCAT+AGG + Chr5:90551201-90551220 MsG0580029024.01.T01:intron 25.0%
! ATTATGTTTGGATTCTACTA+TGG + Chr5:90550825-90550844 MsG0580029024.01.T01:intron 25.0%
! CACAACTTAATTAAATGCTT+AGG + Chr5:90553019-90553038 MsG0580029024.01.T01:three_prime_UTR 25.0%
! CATAATGCCAACAATTATTT+AGG - Chr5:90552868-90552887 None:intergenic 25.0%
! CTTGATTGTTTCCTAATATA+AGG + Chr5:90551736-90551755 MsG0580029024.01.T01:intron 25.0%
! GTCACATATAAACAACATAT+TGG - Chr5:90552613-90552632 None:intergenic 25.0%
! TAAAATAAAGGGAATTAACG+AGG - Chr5:90548830-90548849 None:intergenic 25.0%
! TAAGAATAGAAGAATCCAAA+GGG - Chr5:90548600-90548619 None:intergenic 25.0%
! TCTCTAATTGTTTACTTGTT+TGG + Chr5:90551810-90551829 MsG0580029024.01.T01:intron 25.0%
! TCTTTAAGTATGAATCTTCA+TGG + Chr5:90552116-90552135 MsG0580029024.01.T01:intron 25.0%
! TGTAATTTATTTGCCATGTT+TGG + Chr5:90549989-90550008 MsG0580029024.01.T01:intron 25.0%
! TTAAGAATAGAAGAATCCAA+AGG - Chr5:90548601-90548620 None:intergenic 25.0%
! TTTAATTGCAGGAACTTTAA+GGG + Chr5:90550053-90550072 MsG0580029024.01.T01:intron 25.0%
!! AAAAAGTTTTTCTGTTTGGT+TGG + Chr5:90552579-90552598 MsG0580029024.01.T01:intron 25.0%
!! AAAAGTTTTTCTGTTTGGTT+GGG + Chr5:90552580-90552599 MsG0580029024.01.T01:intron 25.0%
!! AAACATTTGTTAGACTCTTT+AGG + Chr5:90553082-90553101 MsG0580029024.01.T01:three_prime_UTR 25.0%
!! ACTTTATTTAAAACCTTCTC+AGG + Chr5:90549254-90549273 MsG0580029024.01.T01:intron 25.0%
!! CTAAGCATTTAATTAAGTTG+TGG - Chr5:90553021-90553040 None:intergenic 25.0%
!!! ACTCTAAAGTATTTGCATTA+CGG - Chr5:90551159-90551178 None:intergenic 25.0%
!!! CATTCAAGTTTTTAAAACTC+AGG - Chr5:90550941-90550960 None:intergenic 25.0%
!!! TATGATTTTGATTTGAGTTG+TGG + Chr5:90549654-90549673 MsG0580029024.01.T01:intron 25.0%
!!! TTGATAATTAATGGCCTTTT+TGG - Chr5:90551630-90551649 None:intergenic 25.0%
!!! TTTTAATTGCAGGAACTTTA+AGG + Chr5:90550052-90550071 MsG0580029024.01.T01:intron 25.0%
AAATTGAACCGAACTGTTAA+TGG + Chr5:90552154-90552173 MsG0580029024.01.T01:intron 30.0%
AAGAGAGAAGAACAAAAAAG+CGG + Chr5:90552701-90552720 MsG0580029024.01.T01:three_prime_UTR 30.0%
AAGTATGAATCTTCATGGTT+TGG + Chr5:90552121-90552140 MsG0580029024.01.T01:intron 30.0%
AGTCCATCCTAAATAATTGT+TGG + Chr5:90552858-90552877 MsG0580029024.01.T01:three_prime_UTR 30.0%
AGTTGTATGCTATATTCTAG+TGG + Chr5:90550698-90550717 MsG0580029024.01.T01:intron 30.0%
ATACATGAGTTTGAATTGTG+GGG + Chr5:90549057-90549076 MsG0580029024.01.T01:intron 30.0%
ATGAAATGAGATAAGTACTC+TGG - Chr5:90551568-90551587 None:intergenic 30.0%
ATGCCAACAATTATTTAGGA+TGG - Chr5:90552864-90552883 None:intergenic 30.0%
ATTAAAAACCCGAAATGCAA+TGG + Chr5:90550305-90550324 MsG0580029024.01.T01:intron 30.0%
CAATTACAACATCCTAAACA+TGG - Chr5:90549280-90549299 None:intergenic 30.0%
GATACATGAGTTTGAATTGT+GGG + Chr5:90549056-90549075 MsG0580029024.01.T01:intron 30.0%
GGCATGACAATAATCATTAT+CGG - Chr5:90549785-90549804 None:intergenic 30.0%
GTGTGTGATTCTTTATATTG+CGG + Chr5:90549125-90549144 MsG0580029024.01.T01:intron 30.0%
TAAAAACTTGAATGCAACGT+TGG + Chr5:90550947-90550966 MsG0580029024.01.T01:intron 30.0%
TATGCTATATTCTAGTGGTT+GGG + Chr5:90550703-90550722 MsG0580029024.01.T01:intron 30.0%
TGAAATGAGATAAGTACTCT+GGG - Chr5:90551567-90551586 None:intergenic 30.0%
TGAACAGTTTCTAATCAGTT+CGG - Chr5:90552359-90552378 None:intergenic 30.0%
TGATACATGAGTTTGAATTG+TGG + Chr5:90549055-90549074 MsG0580029024.01.T01:intron 30.0%
TGTTTATGAGTCAAAGTCTA+CGG + Chr5:90550885-90550904 MsG0580029024.01.T01:intron 30.0%
TTAATGAGTCTACAACGTAA+TGG + Chr5:90550236-90550255 MsG0580029024.01.T01:intron 30.0%
TTGAATATTACCTACCATTG+AGG - Chr5:90552091-90552110 None:intergenic 30.0%
! AGTTTGTGTTCTTTTCAGTT+CGG - Chr5:90552400-90552419 None:intergenic 30.0%
! ATAGCAATTTGGTGAAAGTT+TGG - Chr5:90552294-90552313 None:intergenic 30.0%
!! AAGAATCAGTTTTGTGCAAA+AGG - Chr5:90552265-90552284 None:intergenic 30.0%
!! ACTGATTTGATTTGTGTTTG+TGG + Chr5:90549013-90549032 MsG0580029024.01.T01:intron 30.0%
!! ATTCTCTTTGAAGTTGGAAA+AGG + Chr5:90551344-90551363 MsG0580029024.01.T01:three_prime_UTR 30.0%
!! ATTTGATTTGTGTTTGTGGT+GGG + Chr5:90549017-90549036 MsG0580029024.01.T01:intron 30.0%
!! CACTATATTCTCTTTGAAGT+TGG + Chr5:90551338-90551357 MsG0580029024.01.T01:three_prime_UTR 30.0%
!! CAGTTTTCTCTAGTTTGATT+CGG - Chr5:90552235-90552254 None:intergenic 30.0%
!! CATAATTTGTTTGACCTTCA+TGG - Chr5:90551405-90551424 None:intergenic 30.0%
!! CTCTAAAGTATTTGCATTAC+GGG - Chr5:90551158-90551177 None:intergenic 30.0%
!! GTGTTGATGATTTGTGAATT+TGG + Chr5:90550663-90550682 MsG0580029024.01.T01:intron 30.0%
!! TGAAGACAACGAAGTATTTT+TGG - Chr5:90548682-90548701 None:intergenic 30.0%
!!! AAAGTGATGAACCTTGTTTT+TGG - Chr5:90548763-90548782 None:intergenic 30.0%
!!! ATGTTTTGGTTTTTTGGACA+AGG + Chr5:90549322-90549341 MsG0580029024.01.T01:intron 30.0%
!!! ATTTTGATTTGAGTTGTGGT+GGG + Chr5:90549658-90549677 MsG0580029024.01.T01:intron 30.0%
!!! GTAATTTGTTTGCGATGTTT+TGG + Chr5:90549308-90549327 MsG0580029024.01.T01:intron 30.0%
!!! TTTGCGATGTTTTGGTTTTT+TGG + Chr5:90549316-90549335 MsG0580029024.01.T01:intron 30.0%
!!! TTTTTGGTTGAGAGTGTAAT+GGG + Chr5:90548987-90549006 MsG0580029024.01.T01:intron 30.0%
AAACATGTCTAACATGACAG+TGG + Chr5:90550272-90550291 MsG0580029024.01.T01:intron 35.0%
AAATATGATACTACGAGTCC+AGG + Chr5:90551687-90551706 MsG0580029024.01.T01:intron 35.0%
AAATGAGATAAGTACTCTGG+GGG - Chr5:90551565-90551584 None:intergenic 35.0%
AACTTGATGCAAAAAGGTCA+TGG + Chr5:90552748-90552767 MsG0580029024.01.T01:three_prime_UTR 35.0%
AAGATTCACGACAGTAATCT+AGG - Chr5:90549910-90549929 None:intergenic 35.0%
AAGCGAAACTTGATGCAAAA+AGG + Chr5:90552742-90552761 MsG0580029024.01.T01:three_prime_UTR 35.0%
AATATGATACTACGAGTCCA+GGG + Chr5:90551688-90551707 MsG0580029024.01.T01:intron 35.0%
AATCAGTTCGGTTCAACTTT+AGG - Chr5:90552347-90552366 None:intergenic 35.0%
AATGCAATGGTTGACTGATA+AGG + Chr5:90550318-90550337 MsG0580029024.01.T01:intron 35.0%
ACTCAAGAGCTTAACAACTA+CGG - Chr5:90549437-90549456 None:intergenic 35.0%
AGAAGAAAAAGAGTCAACGA+TGG - Chr5:90548788-90548807 None:intergenic 35.0%
AGGAAGAACCATTAACAGTT+CGG - Chr5:90552165-90552184 None:intergenic 35.0%
AGTAATCTAGGCCACAATAA+TGG - Chr5:90549898-90549917 None:intergenic 35.0%
ATCAGTCAACCATTGCATTT+CGG - Chr5:90550317-90550336 None:intergenic 35.0%
ATGCAAAAAGGTCATGGAAA+GGG + Chr5:90552754-90552773 MsG0580029024.01.T01:three_prime_UTR 35.0%
CGAAAGAAAGAATGCCAAAA+AGG + Chr5:90551613-90551632 MsG0580029024.01.T01:intron 35.0%
CTGTCATGTTAGACATGTTT+AGG - Chr5:90550272-90550291 None:intergenic 35.0%
CTTTATATTGCGGATGATTG+TGG + Chr5:90549135-90549154 MsG0580029024.01.T01:intron 35.0%
GAAATGAGATAAGTACTCTG+GGG - Chr5:90551566-90551585 None:intergenic 35.0%
GAAGCTATGCAGTAAATTCT+TGG + Chr5:90551711-90551730 MsG0580029024.01.T01:intron 35.0%
GACAAAAAAACCATTTGTCG+TGG + Chr5:90549206-90549225 MsG0580029024.01.T01:intron 35.0%
GTATGCTATATTCTAGTGGT+TGG + Chr5:90550702-90550721 MsG0580029024.01.T01:intron 35.0%
TACAATAGCCTTCGTCAATA+TGG - Chr5:90549957-90549976 None:intergenic 35.0%
TCAATGAAGGTTGCTATAGT+TGG + Chr5:90552007-90552026 MsG0580029024.01.T01:intron 35.0%
TCTTTGCATGCATTGCTTAA+AGG + Chr5:90549381-90549400 MsG0580029024.01.T01:intron 35.0%
TGAACGAGTCTACAACATAA+TGG + Chr5:90549581-90549600 MsG0580029024.01.T01:intron 35.0%
TTAAAAACTCCATAGGCGAT+AGG + Chr5:90551208-90551227 MsG0580029024.01.T01:intron 35.0%
TTATTTGCCATGTTTGGATC+AGG + Chr5:90549995-90550014 MsG0580029024.01.T01:intron 35.0%
! AATGTTCCATTTCTGAGAAC+AGG + Chr5:90548625-90548644 MsG0580029024.01.T01:CDS 35.0%
! ATTTCTGAGAACAGGTTCAT+CGG + Chr5:90548633-90548652 MsG0580029024.01.T01:CDS 35.0%
! CAATTCGGTTCTTTTCAGTA+CGG + Chr5:90552438-90552457 MsG0580029024.01.T01:intron 35.0%
! TCGTGACTCAAATTTTGTAG+CGG + Chr5:90549231-90549250 MsG0580029024.01.T01:intron 35.0%
! TTTTACAGTGTGCAAACCAT+GGG + Chr5:90551020-90551039 MsG0580029024.01.T01:intron 35.0%
!! AAGAAGCTTCTGAAACGAAT+CGG - Chr5:90548724-90548743 None:intergenic 35.0%
!! AAGTGAAAGTGCATGCTTTT+TGG + Chr5:90548971-90548990 MsG0580029024.01.T01:intron 35.0%
!! AGATGCAATTGATTTGTCTG+GGG + Chr5:90551043-90551062 MsG0580029024.01.T01:CDS 35.0%
!! ATACCAGTTTGGTTTGGTTT+AGG - Chr5:90552185-90552204 None:intergenic 35.0%
!! GAGATGCAATTGATTTGTCT+GGG + Chr5:90551042-90551061 MsG0580029024.01.T01:CDS 35.0%
!! GATTTGATTTGTGTTTGTGG+TGG + Chr5:90549016-90549035 MsG0580029024.01.T01:intron 35.0%
!! TTAGGATGGACTCAGAATTT+TGG - Chr5:90552850-90552869 None:intergenic 35.0%
!! TTTGATTCGGAAAAGCACTA+CGG - Chr5:90552222-90552241 None:intergenic 35.0%
!!! CTTTTTGGTTGAGAGTGTAA+TGG + Chr5:90548986-90549005 MsG0580029024.01.T01:intron 35.0%
!!! GATTTTGATTTGAGTTGTGG+TGG + Chr5:90549657-90549676 MsG0580029024.01.T01:intron 35.0%
!!! GTATTTTTGGAGAACAAGAG+TGG - Chr5:90548669-90548688 None:intergenic 35.0%
AAACTCAGGAGTCTATGAAG+AGG - Chr5:90550927-90550946 None:intergenic 40.0%
AAAGGTCATGGAAAGGGTAA+AGG + Chr5:90552760-90552779 MsG0580029024.01.T01:three_prime_UTR 40.0%
AAGGTCATGGAAAGGGTAAA+GGG + Chr5:90552761-90552780 MsG0580029024.01.T01:three_prime_UTR 40.0%
AATGAGATAAGTACTCTGGG+GGG - Chr5:90551564-90551583 None:intergenic 40.0%
ACCAAACCAAACTGGTATGA+AGG + Chr5:90552187-90552206 MsG0580029024.01.T01:intron 40.0%
ACCTTCATACCAGTTTGGTT+TGG - Chr5:90552191-90552210 None:intergenic 40.0%
ACTGAACCTTCATACCAGTT+TGG - Chr5:90552196-90552215 None:intergenic 40.0%
AGCTGAATCTAGATTCATGG+AGG + Chr5:90550541-90550560 MsG0580029024.01.T01:intron 40.0%
ATATGATACTACGAGTCCAG+GGG + Chr5:90551689-90551708 MsG0580029024.01.T01:intron 40.0%
ATCGAGATGTTAGATGCTCA+TGG - Chr5:90550392-90550411 None:intergenic 40.0%
ATGGATATCATGTGCTGCAT+CGG - Chr5:90550373-90550392 None:intergenic 40.0%
ATTCTAACTCACGTCCTTGT+AGG - Chr5:90552051-90552070 None:intergenic 40.0%
CAAATCAATTGCATCTCCCA+TGG - Chr5:90551039-90551058 None:intergenic 40.0%
CATGATTTCCCGCGATATTA+AGG - Chr5:90549813-90549832 None:intergenic 40.0%
CATTCTTGCTCGTCACAATT+CGG + Chr5:90552423-90552442 MsG0580029024.01.T01:intron 40.0%
CATTGCAGTCAAAACCATGA+AGG + Chr5:90551388-90551407 MsG0580029024.01.T01:three_prime_UTR 40.0%
CCATGAATCTAGATTCAGCT+AGG - Chr5:90550541-90550560 None:intergenic 40.0%
CCTAGCTGAATCTAGATTCA+TGG + Chr5:90550538-90550557 MsG0580029024.01.T01:intron 40.0%
CGTATTGCAAACTTGCAATG+GGG - Chr5:90550469-90550488 None:intergenic 40.0%
CTAAAGAGGGAAGAGATGAA+TGG - Chr5:90550581-90550600 None:intergenic 40.0%
CTGAATCTAGATTCATGGAG+GGG + Chr5:90550543-90550562 MsG0580029024.01.T01:intron 40.0%
CTTAATATCGCGGGAAATCA+TGG + Chr5:90549811-90549830 MsG0580029024.01.T01:intron 40.0%
CTTCCTAAACCAAACCAAAC+TGG + Chr5:90552179-90552198 MsG0580029024.01.T01:intron 40.0%
GATGAACCTGTTCTCAGAAA+TGG - Chr5:90548634-90548653 None:intergenic 40.0%
GATGCAAAAAGGTCATGGAA+AGG + Chr5:90552753-90552772 MsG0580029024.01.T01:three_prime_UTR 40.0%
GATTCAGCTAGGTAGAACTA+AGG - Chr5:90550530-90550549 None:intergenic 40.0%
GATTCAGCTCATATCCTACA+AGG + Chr5:90552034-90552053 MsG0580029024.01.T01:intron 40.0%
GCGTATTGCAAACTTGCAAT+GGG - Chr5:90550470-90550489 None:intergenic 40.0%
GCTGAATCTAGATTCATGGA+GGG + Chr5:90550542-90550561 MsG0580029024.01.T01:intron 40.0%
GGTAAAGGGAAAGCAAAGTA+GGG + Chr5:90552775-90552794 MsG0580029024.01.T01:three_prime_UTR 40.0%
GTATTGCAAACTTGCAATGG+GGG - Chr5:90550468-90550487 None:intergenic 40.0%
GTTCTTTATGTGCCCAAGTA+TGG + Chr5:90552991-90553010 MsG0580029024.01.T01:three_prime_UTR 40.0%
TACACGACTCTGAATTTGCA+TGG + Chr5:90549699-90549718 MsG0580029024.01.T01:intron 40.0%
TACTCTCGATGCAGGAATTA+TGG - Chr5:90550859-90550878 None:intergenic 40.0%
TATTGCAAACTTGCAATGGG+GGG - Chr5:90550467-90550486 None:intergenic 40.0%
TCAGTCAACCATTGCATTTC+GGG - Chr5:90550316-90550335 None:intergenic 40.0%
TCGGACTACTATTTAAACCC+TGG - Chr5:90549766-90549785 None:intergenic 40.0%
TGCAAGCCAGAATATGCATA+TGG + Chr5:90551514-90551533 MsG0580029024.01.T01:three_prime_UTR 40.0%
TGGAAAAGGCAGTGTTATCA+AGG + Chr5:90551358-90551377 MsG0580029024.01.T01:three_prime_UTR 40.0%
TGTAGTGTCAAAGACTTCAC+CGG - Chr5:90551307-90551326 None:intergenic 40.0%
TTCAGCTGAGACCAAAAACA+AGG + Chr5:90548749-90548768 MsG0580029024.01.T01:CDS 40.0%
TTGCTGAAACCACAACACAA+CGG - Chr5:90549865-90549884 None:intergenic 40.0%
! AATCGGGTTAACGGGTAAAA+CGG - Chr5:90548707-90548726 None:intergenic 40.0%
! AGAATATGCATATGGTAGCG+CGG + Chr5:90551522-90551541 MsG0580029024.01.T01:three_prime_UTR 40.0%
! GGTTTGTTCATGCTTTCACA+GGG - Chr5:90550446-90550465 None:intergenic 40.0%
! GTTTTACAGTGTGCAAACCA+TGG + Chr5:90551019-90551038 MsG0580029024.01.T01:intron 40.0%
! TCTCTTCTTTTCCTCCTCTT+TGG - Chr5:90552687-90552706 None:intergenic 40.0%
! TCTGAAACGAATCGGGTTAA+CGG - Chr5:90548716-90548735 None:intergenic 40.0%
! TGTTCTTTTCAGTTCGGTTC+AGG - Chr5:90552394-90552413 None:intergenic 40.0%
!! AGAAGCTTCTGAAACGAATC+GGG - Chr5:90548723-90548742 None:intergenic 40.0%
!! ATTGATTTGTACTCAGTGCC+AGG + Chr5:90549745-90549764 MsG0580029024.01.T01:intron 40.0%
!! ATTTGTGTTTGTGGTGGGTT+TGG + Chr5:90549022-90549041 MsG0580029024.01.T01:intron 40.0%
!! GAATCTTCATGGTTTGGTTC+AGG + Chr5:90552127-90552146 MsG0580029024.01.T01:intron 40.0%
!! GGAGATGCAATTGATTTGTC+TGG + Chr5:90551041-90551060 MsG0580029024.01.T01:CDS 40.0%
!! TTGATTTGTACTCAGTGCCA+GGG + Chr5:90549746-90549765 MsG0580029024.01.T01:intron 40.0%
!!! TGTTTTTGGTCTCAGCTGAA+AGG - Chr5:90548749-90548768 None:intergenic 40.0%
!!! TTCGTCTCATTTTTTTCCGC+TGG + Chr5:90551459-90551478 MsG0580029024.01.T01:intron 40.0%
!!! TTTTTTCCGCTGGTTTCAAC+AGG + Chr5:90551469-90551488 MsG0580029024.01.T01:intron 40.0%
AACCTTCTCAGGCCATGTTT+AGG + Chr5:90549265-90549284 MsG0580029024.01.T01:intron 45.0%
AAGGCAGTGTTATCAAGGCT+TGG + Chr5:90551363-90551382 MsG0580029024.01.T01:three_prime_UTR 45.0%
AAGGTTCAGAACATCAGAGC+TGG - Chr5:90550511-90550530 None:intergenic 45.0%
AAGTTGAGCTAGTTGCGTGT+AGG + Chr5:90551862-90551881 MsG0580029024.01.T01:three_prime_UTR 45.0%
AAGTTGTGGTGAGCCATACT+TGG - Chr5:90553007-90553026 None:intergenic 45.0%
ACAACCGGAAAGTCTTCTGT+TGG - Chr5:90551121-90551140 None:intergenic 45.0%
ACTTGAATGCAACGTTGGTG+AGG + Chr5:90550952-90550971 MsG0580029024.01.T01:intron 45.0%
AGAGGGAAGAGATGAATGGT+AGG - Chr5:90550577-90550596 None:intergenic 45.0%
AGGCAGTGTTATCAAGGCTT+GGG + Chr5:90551364-90551383 MsG0580029024.01.T01:three_prime_UTR 45.0%
AGGTTCAGAACATCAGAGCT+GGG - Chr5:90550510-90550529 None:intergenic 45.0%
AGTGTGAGAACCTCAATGGT+AGG + Chr5:90552078-90552097 MsG0580029024.01.T01:intron 45.0%
AGTTGTGGTGAGCCATACTT+GGG - Chr5:90553006-90553025 None:intergenic 45.0%
ATCCTAAACATGGCCTGAGA+AGG - Chr5:90549270-90549289 None:intergenic 45.0%
ATGGTCAAATGTGGTCGATG+CGG + Chr5:90549830-90549849 MsG0580029024.01.T01:intron 45.0%
ATTTACTGCATAGCTTCCCC+TGG - Chr5:90551708-90551727 None:intergenic 45.0%
CAAGAGTTTACTCTCGATGC+AGG - Chr5:90550867-90550886 None:intergenic 45.0%
CGGATGATTGTGGTCAAATG+TGG + Chr5:90549145-90549164 MsG0580029024.01.T01:intron 45.0%
CGGGAAATCATGGTCAAATG+TGG + Chr5:90549821-90549840 MsG0580029024.01.T01:intron 45.0%
CTCAGTAGTAAAGCAGACCA+CGG - Chr5:90550772-90550791 None:intergenic 45.0%
CTGAAACGAATCGGGTTAAC+GGG - Chr5:90548715-90548734 None:intergenic 45.0%
GAAGACTTTCCGGTTGTTGA+TGG + Chr5:90551124-90551143 MsG0580029024.01.T01:CDS 45.0%
GAGGGAAGAGATGAATGGTA+GGG - Chr5:90550576-90550595 None:intergenic 45.0%
GAGTCATCAAGACCATTGTG+AGG + Chr5:90551072-90551091 MsG0580029024.01.T01:CDS 45.0%
GCGCTACCATATGCATATTC+TGG - Chr5:90551523-90551542 None:intergenic 45.0%
GCTAAGTGTGAGAACCTCAA+TGG + Chr5:90552074-90552093 MsG0580029024.01.T01:intron 45.0%
GGCGTATTGCAAACTTGCAA+TGG - Chr5:90550471-90550490 None:intergenic 45.0%
GGGTAAAGGGAAAGCAAAGT+AGG + Chr5:90552774-90552793 MsG0580029024.01.T01:three_prime_UTR 45.0%
TCCCGCGATATTAAGGATTG+CGG - Chr5:90549806-90549825 None:intergenic 45.0%
TGCCGCAATCCTTAATATCG+CGG + Chr5:90549801-90549820 MsG0580029024.01.T01:intron 45.0%
TTGAGGTTCTCACACTTAGC+AGG - Chr5:90552074-90552093 None:intergenic 45.0%
TTGCTTATGAAGCTTCACCG+TGG + Chr5:90550752-90550771 MsG0580029024.01.T01:intron 45.0%
! AAAACAAGTGTTGCGCTGCA+AGG - Chr5:90551840-90551859 None:intergenic 45.0%
! AAACAAGTGTTGCGCTGCAA+GGG - Chr5:90551839-90551858 None:intergenic 45.0%
! ATCGGGTTAACGGGTAAAAC+GGG - Chr5:90548706-90548725 None:intergenic 45.0%
! CTTGAATGCAACGTTGGTGA+GGG + Chr5:90550953-90550972 MsG0580029024.01.T01:intron 45.0%
! GAAGGTTGCTATAGTTGGTG+TGG + Chr5:90552012-90552031 MsG0580029024.01.T01:intron 45.0%
! GAATATGCATATGGTAGCGC+GGG + Chr5:90551523-90551542 MsG0580029024.01.T01:three_prime_UTR 45.0%
! GGGTCTTGTGTTTGTAACAC+TGG + Chr5:90548946-90548965 MsG0580029024.01.T01:intron 45.0%
! GGGTTTGTTCATGCTTTCAC+AGG - Chr5:90550447-90550466 None:intergenic 45.0%
! TGAAGCACACTTGCTGATAC+CGG + Chr5:90551285-90551304 MsG0580029024.01.T01:exon 45.0%
!! AGATGTTGGGTAGCTTGCTA+TGG + Chr5:90552914-90552933 MsG0580029024.01.T01:three_prime_UTR 45.0%
!! ATCCACCACTGGAAGTGTTT+CGG + Chr5:90551896-90551915 MsG0580029024.01.T01:three_prime_UTR 45.0%
!! ATTGATTTGTCTGGGGATGG+CGG + Chr5:90551050-90551069 MsG0580029024.01.T01:CDS 45.0%
!! GATTTGAGTTGTGGTGGGTT+TGG + Chr5:90549663-90549682 MsG0580029024.01.T01:intron 45.0%
!! GCAATTGATTTGTCTGGGGA+TGG + Chr5:90551047-90551066 MsG0580029024.01.T01:CDS 45.0%
!! TGTAAGTGCTGTTTGAGCCT+TGG + Chr5:90552497-90552516 MsG0580029024.01.T01:intron 45.0%
!! TAAAAAAAAAAACATAAAAA+TGG - Chr5:90550037-90550056 None:intergenic 5.0%
AAGTTTGCAATACGCCAGCG+AGG + Chr5:90550475-90550494 MsG0580029024.01.T01:intron 50.0%
ACACCAGCCTGATCCAAACA+TGG - Chr5:90550005-90550024 None:intergenic 50.0%
ACAGGTTCATCGGACGCATA+TGG + Chr5:90548643-90548662 MsG0580029024.01.T01:CDS 50.0%
AGTCACGAGTCCACGACAAA+TGG - Chr5:90549219-90549238 None:intergenic 50.0%
AGTGCGTGCCATATTGACGA+AGG + Chr5:90549946-90549965 MsG0580029024.01.T01:intron 50.0%
CAATATGGCACGCACTGAGT+AGG - Chr5:90549942-90549961 None:intergenic 50.0%
CATAGGCGATAGGACTTGCA+TGG + Chr5:90551218-90551237 MsG0580029024.01.T01:intron 50.0%
CATGCAAGTCCTATCGCCTA+TGG - Chr5:90551220-90551239 None:intergenic 50.0%
CCTCAAAAGCCGTTGTGTTG+TGG + Chr5:90549853-90549872 MsG0580029024.01.T01:intron 50.0%
CTCCAACCTGTTGAAACCAG+CGG - Chr5:90551478-90551497 None:intergenic 50.0%
CTGACTGCTCTTCCTCACAA+TGG - Chr5:90551087-90551106 None:intergenic 50.0%
GAAGAGATGAATGGTAGGGC+TGG - Chr5:90550572-90550591 None:intergenic 50.0%
GAGGGCTAGACTTGAGTAAG+TGG + Chr5:90551923-90551942 MsG0580029024.01.T01:intron 50.0%
GCCAGCATACCATCAACAAC+CGG - Chr5:90551136-90551155 None:intergenic 50.0%
GCCGCAATCCTTAATATCGC+GGG + Chr5:90549802-90549821 MsG0580029024.01.T01:intron 50.0%
GGCTCCAACAGAAGACTTTC+CGG + Chr5:90551114-90551133 MsG0580029024.01.T01:CDS 50.0%
TTGCCATGTTTGGATCAGGC+TGG + Chr5:90549999-90550018 MsG0580029024.01.T01:intron 50.0%
! AAGTACTCTGGGGGGATATC+TGG - Chr5:90551556-90551575 None:intergenic 50.0%
! CCACAACACAACGGCTTTTG+AGG - Chr5:90549856-90549875 None:intergenic 50.0%
! TATCATGTGCTGCATCGGCA+AGG - Chr5:90550368-90550387 None:intergenic 50.0%
!! TCCGGTTGTTGATGGTATGC+TGG + Chr5:90551132-90551151 MsG0580029024.01.T01:intron 50.0%
!! TGGAAGTGTTTCGGAGGAGA+GGG + Chr5:90551905-90551924 MsG0580029024.01.T01:three_prime_UTR 50.0%
!! TTCCGCTGGTTTCAACAGGT+TGG + Chr5:90551473-90551492 MsG0580029024.01.T01:intron 50.0%
AGTTGCGTGTAGGCCACGTA+AGG + Chr5:90551872-90551891 MsG0580029024.01.T01:three_prime_UTR 55.0%
CTCCGAAACACTTCCAGTGG+TGG - Chr5:90551901-90551920 None:intergenic 55.0%
CTCCTCCGAAACACTTCCAG+TGG - Chr5:90551904-90551923 None:intergenic 55.0%
GATTGCTGCTGCAGCCAAAG+AGG + Chr5:90552670-90552689 MsG0580029024.01.T01:three_prime_UTR 55.0%
GGAAGAGCAGTCAGATGCTG+TGG + Chr5:90551093-90551112 MsG0580029024.01.T01:CDS 55.0%
GTTGCGTGTAGGCCACGTAA+GGG + Chr5:90551873-90551892 MsG0580029024.01.T01:three_prime_UTR 55.0%
TCGCTGAAACCACAACGCAG+CGG - Chr5:90549188-90549207 None:intergenic 55.0%
TGAACCGCAGGAGCTCACTA+GGG - Chr5:90552535-90552554 None:intergenic 55.0%
TTGAACCGCAGGAGCTCACT+AGG - Chr5:90552536-90552555 None:intergenic 55.0%
! CGTGGAGCACTTTCACCCTT+TGG + Chr5:90548582-90548601 MsG0580029024.01.T01:CDS 55.0%
! TACTCTGGGGGGATATCTGG+CGG - Chr5:90551553-90551572 None:intergenic 55.0%
! TAGGGCTAGGCAAAGCACCA+AGG - Chr5:90552517-90552536 None:intergenic 55.0%
! TGTGCTGCATCGGCAAGGTT+AGG - Chr5:90550363-90550382 None:intergenic 55.0%
!! CACCACTGGAAGTGTTTCGG+AGG + Chr5:90551899-90551918 MsG0580029024.01.T01:three_prime_UTR 55.0%
!! CTGGAAGTGTTTCGGAGGAG+AGG + Chr5:90551904-90551923 MsG0580029024.01.T01:three_prime_UTR 55.0%
CCACGTAAGGGATCCACCAC+TGG + Chr5:90551885-90551904 MsG0580029024.01.T01:three_prime_UTR 60.0%
CCTCAAAAGCCGCTGCGTTG+TGG + Chr5:90549176-90549195 MsG0580029024.01.T01:intron 60.0%
CTAGCCCTAGTGAGCTCCTG+CGG + Chr5:90552528-90552547 MsG0580029024.01.T01:intron 60.0%
CTGGGTTCACATCACCTCGC+TGG - Chr5:90550492-90550511 None:intergenic 60.0%
TGCTGCTGCAGCCAAAGAGG+AGG + Chr5:90552673-90552692 MsG0580029024.01.T01:three_prime_UTR 60.0%
! CCACAACGCAGCGGCTTTTG+AGG - Chr5:90549179-90549198 None:intergenic 60.0%
!! CCAGTGGTGGATCCCTTACG+TGG - Chr5:90551888-90551907 None:intergenic 60.0%
!! GTGAAAGTGCTCCACGCGCA+GGG - Chr5:90548578-90548597 None:intergenic 60.0%
!!! GCAGCGGCTTTTGAGGTCGA+TGG - Chr5:90549172-90549191 None:intergenic 60.0%
CGCAGGAGCTCACTAGGGCT+AGG - Chr5:90552530-90552549 None:intergenic 65.0%
!! GGTGAAAGTGCTCCACGCGC+AGG - Chr5:90548579-90548598 None:intergenic 65.0%
ACACGCGTGGACCCTGCGCG+TGG + Chr5:90548564-90548583 MsG0580029024.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 90548559 90553130 90548559 ID=MsG0580029024.01;Name=MsG0580029024.01
Chr5 mRNA 90548559 90553130 90548559 ID=MsG0580029024.01.T01;Parent=MsG0580029024.01;Name=MsG0580029024.01.T01;_AED=0.26;_eAED=0.26;_QI=0|1|1|1|0|0|6|762|117
Chr5 exon 90548559 90548770 90548559 ID=MsG0580029024.01.T01:exon:17649;Parent=MsG0580029024.01.T01
Chr5 exon 90551028 90551145 90551028 ID=MsG0580029024.01.T01:exon:17650;Parent=MsG0580029024.01.T01
Chr5 exon 90551278 90551409 90551278 ID=MsG0580029024.01.T01:exon:17651;Parent=MsG0580029024.01.T01
Chr5 exon 90551491 90551569 90551491 ID=MsG0580029024.01.T01:exon:17652;Parent=MsG0580029024.01.T01
Chr5 exon 90551845 90551937 90551845 ID=MsG0580029024.01.T01:exon:17653;Parent=MsG0580029024.01.T01
Chr5 exon 90552649 90553130 90552649 ID=MsG0580029024.01.T01:exon:17654;Parent=MsG0580029024.01.T01
Chr5 CDS 90548559 90548770 90548559 ID=MsG0580029024.01.T01:cds;Parent=MsG0580029024.01.T01
Chr5 CDS 90551028 90551145 90551028 ID=MsG0580029024.01.T01:cds;Parent=MsG0580029024.01.T01
Chr5 CDS 90551278 90551301 90551278 ID=MsG0580029024.01.T01:cds;Parent=MsG0580029024.01.T01
Chr5 three_prime_UTR 90551302 90551409 90551302 ID=MsG0580029024.01.T01:three_prime_utr;Parent=MsG0580029024.01.T01
Chr5 three_prime_UTR 90551491 90551569 90551491 ID=MsG0580029024.01.T01:three_prime_utr;Parent=MsG0580029024.01.T01
Chr5 three_prime_UTR 90551845 90551937 90551845 ID=MsG0580029024.01.T01:three_prime_utr;Parent=MsG0580029024.01.T01
Chr5 three_prime_UTR 90552649 90553130 90552649 ID=MsG0580029024.01.T01:three_prime_utr;Parent=MsG0580029024.01.T01
Gene Sequence

>MsG0580029024.01.T01

ATAGCACACGCGTGGACCCTGCGCGTGGAGCACTTTCACCCTTTGGATTCTTCTATTCTTAACGCTAATGTTCCATTTCTGAGAACAGGTTCATCGGACGCATATGGCCACTCTTGTTCTCCAAAAATACTTCGTTGTCTTCAACCCGTTTTACCCGTTAACCCGATTCGTTTCAGAAGCTTCTTCACCTTTCAGCTGAGACCAAAAACAAGTGTGCAAACCATGGGAGATGCAATTGATTTGTCTGGGGATGGCGGAGTCATCAAGACCATTGTGAGGAAGAGCAGTCAGATGCTGTGGCTCCAACAGAAGACTTTCCGGTTGTTGATGTACACTATGAAGCACACTTGCTGA
Protein sequence

>MsG0580029024.01.T01

IAHAWTLRVEHFHPLDSSILNANVPFLRTGSSDAYGHSCSPKILRCLQPVLPVNPIRFRSFFTFQLRPKTSVQTMGDAIDLSGDGGVIKTIVRKSSQMLWLQQKTFRLLMYTMKHTC*