AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029068.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029068.01.T02 MTR_5g081230 98.765 324 3 1 1 323 1 324 0.0 658
MsG0580029068.01.T02 MTR_1g079950 89.404 302 31 1 16 317 30 330 0.0 571
MsG0580029068.01.T02 MTR_1g079950 89.404 302 31 1 16 317 1 301 0.0 571
MsG0580029068.01.T02 MTR_1g079950 89.404 302 31 1 16 317 1 301 0.0 570
MsG0580029068.01.T02 MTR_1g079950 89.404 302 31 1 16 317 1 301 0.0 569
MsG0580029068.01.T02 MTR_7g116380 87.748 302 36 1 16 317 1 301 0.0 560
MsG0580029068.01.T02 MTR_7g116380 87.748 302 36 1 16 317 1 301 0.0 560
MsG0580029068.01.T02 MTR_1g043240 83.946 299 47 1 16 314 1 298 0.0 531
MsG0580029068.01.T02 MTR_1g074880 81.126 302 56 1 16 317 1 301 0.0 524
MsG0580029068.01.T02 MTR_1g074880 81.126 302 56 1 16 317 1 301 0.0 523
MsG0580029068.01.T02 MTR_8g098980 78.105 306 67 0 16 321 1 306 0.0 521
MsG0580029068.01.T02 MTR_8g005010 78.276 290 62 1 21 310 4 292 5.32e-175 486
MsG0580029068.01.T02 MTR_7g112870 76.589 299 67 1 16 314 5 300 3.26e-171 478
MsG0580029068.01.T02 MTR_1g079950 91.322 242 21 0 76 317 34 275 4.37e-171 477
MsG0580029068.01.T02 MTR_1g074880 83.128 243 41 0 75 317 4 246 1.64e-157 441
MsG0580029068.01.T02 MTR_1g074880 83.128 243 41 0 75 317 4 246 2.16e-157 441
MsG0580029068.01.T02 MTR_8g062430 45.763 295 153 3 23 316 6 294 4.44e-95 284
MsG0580029068.01.T02 MTR_5g093990 44.108 297 160 2 21 316 1 292 2.15e-94 282
MsG0580029068.01.T02 MTR_7g107310 44.595 296 157 3 20 314 10 299 4.22e-94 282
MsG0580029068.01.T02 MTR_5g037200 46.102 295 152 3 23 316 6 294 4.76e-94 281
MsG0580029068.01.T02 MTR_8g085610 46.350 274 145 2 42 314 22 294 6.22e-92 276
MsG0580029068.01.T02 MTR_1g039380 42.657 286 161 3 33 316 7 291 9.26e-90 270
MsG0580029068.01.T02 MTR_8g085610 45.556 270 145 2 46 314 2 270 1.25e-89 270
MsG0580029068.01.T02 MTR_1g039380 43.939 264 145 3 55 316 5 267 5.34e-87 263
MsG0580029068.01.T02 MTR_2g087530 46.006 313 153 6 14 310 521 833 7.04e-83 268
MsG0580029068.01.T02 MTR_2g087530 46.006 313 153 6 14 310 634 946 2.16e-82 269
MsG0580029068.01.T02 MTR_1g089370 48.239 284 131 6 42 310 548 830 2.29e-81 264
MsG0580029068.01.T02 MTR_4g050540 45.687 313 154 6 14 310 639 951 4.81e-81 265
MsG0580029068.01.T02 MTR_3g452710 40.476 294 164 5 8 295 158 446 7.60e-71 228
MsG0580029068.01.T02 MTR_3g452710 40.476 294 164 5 8 295 225 513 4.18e-70 228
MsG0580029068.01.T02 MTR_2g100130 37.662 308 173 7 2 295 63 365 2.17e-67 216
MsG0580029068.01.T02 MTR_2g100130 37.662 308 173 7 2 295 133 435 1.62e-66 216
MsG0580029068.01.T02 MTR_2g100130 37.662 308 173 7 2 295 172 474 3.32e-66 216
MsG0580029068.01.T02 MTR_2g100130 37.662 308 173 7 2 295 162 464 3.36e-66 216
MsG0580029068.01.T02 MTR_2g100130 37.662 308 173 7 2 295 172 474 3.75e-66 216
MsG0580029068.01.T02 MTR_2g100130 37.662 308 172 8 2 295 133 434 2.67e-65 213
MsG0580029068.01.T02 MTR_2g100130 37.662 308 172 8 2 295 172 473 5.63e-65 213
MsG0580029068.01.T02 MTR_2g100130 37.919 298 166 7 2 285 172 464 1.48e-64 212
MsG0580029068.01.T02 MTR_2g100160 43.548 248 132 5 55 295 138 384 1.95e-60 199
MsG0580029068.01.T02 MTR_5g037200 51.534 163 78 1 42 203 20 182 1.03e-57 186
MsG0580029068.01.T02 MTR_8g072600 31.613 310 151 9 69 317 129 438 2.70e-36 136
MsG0580029068.01.T02 MTR_8g072600 33.184 223 114 5 68 255 128 350 4.94e-29 114
MsG0580029068.01.T02 MTR_2g099710 28.896 308 167 13 47 313 211 507 2.88e-21 94.7
MsG0580029068.01.T01 MTR_5g081230 98.765 324 3 1 1 323 1 324 0.0 658
MsG0580029068.01.T01 MTR_1g079950 89.404 302 31 1 16 317 30 330 0.0 571
MsG0580029068.01.T01 MTR_1g079950 89.404 302 31 1 16 317 1 301 0.0 571
MsG0580029068.01.T01 MTR_1g079950 89.404 302 31 1 16 317 1 301 0.0 570
MsG0580029068.01.T01 MTR_1g079950 89.404 302 31 1 16 317 1 301 0.0 569
MsG0580029068.01.T01 MTR_7g116380 87.748 302 36 1 16 317 1 301 0.0 560
MsG0580029068.01.T01 MTR_7g116380 87.748 302 36 1 16 317 1 301 0.0 560
MsG0580029068.01.T01 MTR_1g043240 83.946 299 47 1 16 314 1 298 0.0 531
MsG0580029068.01.T01 MTR_1g074880 81.126 302 56 1 16 317 1 301 0.0 524
MsG0580029068.01.T01 MTR_1g074880 81.126 302 56 1 16 317 1 301 0.0 523
MsG0580029068.01.T01 MTR_8g098980 78.105 306 67 0 16 321 1 306 0.0 521
MsG0580029068.01.T01 MTR_8g005010 78.276 290 62 1 21 310 4 292 5.32e-175 486
MsG0580029068.01.T01 MTR_7g112870 76.589 299 67 1 16 314 5 300 3.26e-171 478
MsG0580029068.01.T01 MTR_1g079950 91.322 242 21 0 76 317 34 275 4.37e-171 477
MsG0580029068.01.T01 MTR_1g074880 83.128 243 41 0 75 317 4 246 1.64e-157 441
MsG0580029068.01.T01 MTR_1g074880 83.128 243 41 0 75 317 4 246 2.16e-157 441
MsG0580029068.01.T01 MTR_8g062430 45.763 295 153 3 23 316 6 294 4.44e-95 284
MsG0580029068.01.T01 MTR_5g093990 44.108 297 160 2 21 316 1 292 2.15e-94 282
MsG0580029068.01.T01 MTR_7g107310 44.595 296 157 3 20 314 10 299 4.22e-94 282
MsG0580029068.01.T01 MTR_5g037200 46.102 295 152 3 23 316 6 294 4.76e-94 281
MsG0580029068.01.T01 MTR_8g085610 46.350 274 145 2 42 314 22 294 6.22e-92 276
MsG0580029068.01.T01 MTR_1g039380 42.657 286 161 3 33 316 7 291 9.26e-90 270
MsG0580029068.01.T01 MTR_8g085610 45.556 270 145 2 46 314 2 270 1.25e-89 270
MsG0580029068.01.T01 MTR_1g039380 43.939 264 145 3 55 316 5 267 5.34e-87 263
MsG0580029068.01.T01 MTR_2g087530 46.006 313 153 6 14 310 521 833 7.04e-83 268
MsG0580029068.01.T01 MTR_2g087530 46.006 313 153 6 14 310 634 946 2.16e-82 269
MsG0580029068.01.T01 MTR_1g089370 48.239 284 131 6 42 310 548 830 2.29e-81 264
MsG0580029068.01.T01 MTR_4g050540 45.687 313 154 6 14 310 639 951 4.81e-81 265
MsG0580029068.01.T01 MTR_3g452710 40.476 294 164 5 8 295 158 446 7.60e-71 228
MsG0580029068.01.T01 MTR_3g452710 40.476 294 164 5 8 295 225 513 4.18e-70 228
MsG0580029068.01.T01 MTR_2g100130 37.662 308 173 7 2 295 63 365 2.17e-67 216
MsG0580029068.01.T01 MTR_2g100130 37.662 308 173 7 2 295 133 435 1.62e-66 216
MsG0580029068.01.T01 MTR_2g100130 37.662 308 173 7 2 295 172 474 3.32e-66 216
MsG0580029068.01.T01 MTR_2g100130 37.662 308 173 7 2 295 162 464 3.36e-66 216
MsG0580029068.01.T01 MTR_2g100130 37.662 308 173 7 2 295 172 474 3.75e-66 216
MsG0580029068.01.T01 MTR_2g100130 37.662 308 172 8 2 295 133 434 2.67e-65 213
MsG0580029068.01.T01 MTR_2g100130 37.662 308 172 8 2 295 172 473 5.63e-65 213
MsG0580029068.01.T01 MTR_2g100130 37.919 298 166 7 2 285 172 464 1.48e-64 212
MsG0580029068.01.T01 MTR_2g100160 43.548 248 132 5 55 295 138 384 1.95e-60 199
MsG0580029068.01.T01 MTR_5g037200 51.534 163 78 1 42 203 20 182 1.03e-57 186
MsG0580029068.01.T01 MTR_8g072600 31.613 310 151 9 69 317 129 438 2.70e-36 136
MsG0580029068.01.T01 MTR_8g072600 33.184 223 114 5 68 255 128 350 4.94e-29 114
MsG0580029068.01.T01 MTR_2g099710 28.896 308 167 13 47 313 211 507 2.88e-21 94.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029068.01.T02 AT2G39840 91.262 309 27 0 15 323 13 321 0.0 599
MsG0580029068.01.T02 AT5G59160 82.132 319 49 2 1 318 1 312 0.0 550
MsG0580029068.01.T02 AT5G59160 82.132 319 49 2 1 318 1 312 0.0 550
MsG0580029068.01.T02 AT5G59160 82.132 319 49 2 1 318 1 312 0.0 550
MsG0580029068.01.T02 AT2G29400 81.329 316 55 3 6 318 4 318 0.0 541
MsG0580029068.01.T02 AT3G46820 78.616 318 60 2 1 317 1 311 0.0 531
MsG0580029068.01.T02 AT1G64040 79.801 302 61 0 16 317 1 302 0.0 519
MsG0580029068.01.T02 AT4G11240 76.623 308 72 0 16 323 1 308 0.0 513
MsG0580029068.01.T02 AT5G43380 77.850 307 67 1 16 322 1 306 1.89e-180 502
MsG0580029068.01.T02 AT5G43380 77.850 307 67 1 16 322 1 306 5.35e-180 500
MsG0580029068.01.T02 AT5G43380 77.850 307 67 1 16 322 1 306 1.32e-179 499
MsG0580029068.01.T02 AT5G27840 77.104 297 65 1 15 311 8 301 2.93e-174 486
MsG0580029068.01.T02 AT5G27840 77.104 297 65 1 15 311 8 301 3.76e-174 486
MsG0580029068.01.T02 AT5G27840 77.104 297 65 1 15 311 8 301 3.76e-174 486
MsG0580029068.01.T02 AT5G27840 77.104 297 65 1 15 311 8 301 5.68e-174 485
MsG0580029068.01.T02 AT3G05580 76.768 297 66 1 15 311 8 301 6.17e-170 474
MsG0580029068.01.T02 AT3G05580 75.806 248 57 1 15 262 8 252 4.01e-137 389
MsG0580029068.01.T02 AT5G55260 46.099 282 151 1 42 322 17 298 1.08e-96 288
MsG0580029068.01.T02 AT1G10430 45.763 295 153 3 23 316 6 294 1.38e-95 285
MsG0580029068.01.T02 AT1G10430 45.763 295 153 3 23 316 6 294 1.38e-95 285
MsG0580029068.01.T02 AT4G26720 42.761 297 164 2 21 316 1 292 2.42e-95 285
MsG0580029068.01.T02 AT2G42500 47.445 274 142 2 42 314 27 299 6.17e-95 284
MsG0580029068.01.T02 AT1G69960 47.101 276 144 2 42 316 21 295 3.92e-94 282
MsG0580029068.01.T02 AT3G58500 46.715 274 144 2 42 314 27 299 2.49e-93 280
MsG0580029068.01.T02 AT1G59830 44.746 295 156 3 23 316 6 294 6.71e-93 279
MsG0580029068.01.T02 AT3G19980 42.657 286 161 3 33 316 7 291 3.62e-89 269
MsG0580029068.01.T02 AT1G50370 42.308 286 162 3 33 316 7 291 3.99e-89 269
MsG0580029068.01.T02 AT5G55260 40.248 323 151 2 42 322 17 339 4.25e-88 268
MsG0580029068.01.T02 AT4G03080 45.031 322 159 7 6 310 512 832 3.30e-83 269
MsG0580029068.01.T02 AT1G59830 47.177 248 124 3 23 269 6 247 7.96e-81 246
MsG0580029068.01.T02 AT2G27210 48.029 279 131 5 46 310 674 952 7.32e-80 262
MsG0580029068.01.T02 AT2G27210 48.029 279 131 5 46 310 679 957 7.71e-80 262
MsG0580029068.01.T02 AT1G03445 47.887 284 131 8 42 310 476 757 1.45e-79 258
MsG0580029068.01.T02 AT1G03445 47.887 284 131 8 42 310 476 757 1.60e-79 258
MsG0580029068.01.T02 AT1G08420 45.048 313 156 6 14 310 656 968 3.78e-79 260
MsG0580029068.01.T02 AT1G08420 45.048 313 156 6 14 310 651 963 4.18e-79 260
MsG0580029068.01.T02 AT2G42500 48.869 221 111 2 95 314 33 252 8.88e-75 231
MsG0580029068.01.T02 AT2G42810 41.156 294 162 5 8 295 160 448 3.39e-69 223
MsG0580029068.01.T02 AT2G42810 41.156 294 162 5 8 295 160 448 3.39e-69 223
MsG0580029068.01.T02 AT2G42810 41.156 294 162 5 8 295 160 448 3.39e-69 223
MsG0580029068.01.T02 AT2G42810 41.156 294 162 5 8 295 214 502 8.56e-69 224
MsG0580029068.01.T02 AT2G42810 41.156 294 162 5 8 295 213 501 8.92e-69 224
MsG0580029068.01.T02 AT2G42500 45.578 147 76 3 42 184 27 173 8.50e-43 146
MsG0580029068.01.T02 AT2G42500 45.752 153 77 4 42 190 27 177 1.41e-42 145
MsG0580029068.01.T02 AT2G42500 47.482 139 69 3 42 176 27 165 5.02e-42 144
MsG0580029068.01.T02 AT5G63870 30.744 309 151 11 71 317 79 386 2.39e-32 124
MsG0580029068.01.T02 AT5G63870 30.744 309 151 11 71 317 79 386 2.39e-32 124
MsG0580029068.01.T02 AT5G63870 33.032 221 111 7 71 255 79 298 1.79e-26 106
MsG0580029068.01.T02 AT1G48120 29.195 298 151 8 47 284 628 925 2.22e-26 110
MsG0580029068.01.T02 AT5G10900 29.851 268 140 9 68 293 222 483 2.16e-20 92.4
MsG0580029068.01.T02 AT5G10900 29.851 268 140 9 68 293 222 483 2.78e-20 92.0
MsG0580029068.01.T02 AT5G10900 29.851 268 140 9 68 293 222 483 3.04e-20 91.7
MsG0580029068.01.T01 AT2G39840 91.262 309 27 0 15 323 13 321 0.0 599
MsG0580029068.01.T01 AT5G59160 82.132 319 49 2 1 318 1 312 0.0 550
MsG0580029068.01.T01 AT5G59160 82.132 319 49 2 1 318 1 312 0.0 550
MsG0580029068.01.T01 AT5G59160 82.132 319 49 2 1 318 1 312 0.0 550
MsG0580029068.01.T01 AT2G29400 81.329 316 55 3 6 318 4 318 0.0 541
MsG0580029068.01.T01 AT3G46820 78.616 318 60 2 1 317 1 311 0.0 531
MsG0580029068.01.T01 AT1G64040 79.801 302 61 0 16 317 1 302 0.0 519
MsG0580029068.01.T01 AT4G11240 76.623 308 72 0 16 323 1 308 0.0 513
MsG0580029068.01.T01 AT5G43380 77.850 307 67 1 16 322 1 306 1.89e-180 502
MsG0580029068.01.T01 AT5G43380 77.850 307 67 1 16 322 1 306 5.35e-180 500
MsG0580029068.01.T01 AT5G43380 77.850 307 67 1 16 322 1 306 1.32e-179 499
MsG0580029068.01.T01 AT5G27840 77.104 297 65 1 15 311 8 301 2.93e-174 486
MsG0580029068.01.T01 AT5G27840 77.104 297 65 1 15 311 8 301 3.76e-174 486
MsG0580029068.01.T01 AT5G27840 77.104 297 65 1 15 311 8 301 3.76e-174 486
MsG0580029068.01.T01 AT5G27840 77.104 297 65 1 15 311 8 301 5.68e-174 485
MsG0580029068.01.T01 AT3G05580 76.768 297 66 1 15 311 8 301 6.17e-170 474
MsG0580029068.01.T01 AT3G05580 75.806 248 57 1 15 262 8 252 4.01e-137 389
MsG0580029068.01.T01 AT5G55260 46.099 282 151 1 42 322 17 298 1.08e-96 288
MsG0580029068.01.T01 AT1G10430 45.763 295 153 3 23 316 6 294 1.38e-95 285
MsG0580029068.01.T01 AT1G10430 45.763 295 153 3 23 316 6 294 1.38e-95 285
MsG0580029068.01.T01 AT4G26720 42.761 297 164 2 21 316 1 292 2.42e-95 285
MsG0580029068.01.T01 AT2G42500 47.445 274 142 2 42 314 27 299 6.17e-95 284
MsG0580029068.01.T01 AT1G69960 47.101 276 144 2 42 316 21 295 3.92e-94 282
MsG0580029068.01.T01 AT3G58500 46.715 274 144 2 42 314 27 299 2.49e-93 280
MsG0580029068.01.T01 AT1G59830 44.746 295 156 3 23 316 6 294 6.71e-93 279
MsG0580029068.01.T01 AT3G19980 42.657 286 161 3 33 316 7 291 3.62e-89 269
MsG0580029068.01.T01 AT1G50370 42.308 286 162 3 33 316 7 291 3.99e-89 269
MsG0580029068.01.T01 AT5G55260 40.248 323 151 2 42 322 17 339 4.25e-88 268
MsG0580029068.01.T01 AT4G03080 45.031 322 159 7 6 310 512 832 3.30e-83 269
MsG0580029068.01.T01 AT1G59830 47.177 248 124 3 23 269 6 247 7.96e-81 246
MsG0580029068.01.T01 AT2G27210 48.029 279 131 5 46 310 674 952 7.32e-80 262
MsG0580029068.01.T01 AT2G27210 48.029 279 131 5 46 310 679 957 7.71e-80 262
MsG0580029068.01.T01 AT1G03445 47.887 284 131 8 42 310 476 757 1.45e-79 258
MsG0580029068.01.T01 AT1G03445 47.887 284 131 8 42 310 476 757 1.60e-79 258
MsG0580029068.01.T01 AT1G08420 45.048 313 156 6 14 310 656 968 3.78e-79 260
MsG0580029068.01.T01 AT1G08420 45.048 313 156 6 14 310 651 963 4.18e-79 260
MsG0580029068.01.T01 AT2G42500 48.869 221 111 2 95 314 33 252 8.88e-75 231
MsG0580029068.01.T01 AT2G42810 41.156 294 162 5 8 295 160 448 3.39e-69 223
MsG0580029068.01.T01 AT2G42810 41.156 294 162 5 8 295 160 448 3.39e-69 223
MsG0580029068.01.T01 AT2G42810 41.156 294 162 5 8 295 160 448 3.39e-69 223
MsG0580029068.01.T01 AT2G42810 41.156 294 162 5 8 295 214 502 8.56e-69 224
MsG0580029068.01.T01 AT2G42810 41.156 294 162 5 8 295 213 501 8.92e-69 224
MsG0580029068.01.T01 AT2G42500 45.578 147 76 3 42 184 27 173 8.50e-43 146
MsG0580029068.01.T01 AT2G42500 45.752 153 77 4 42 190 27 177 1.41e-42 145
MsG0580029068.01.T01 AT2G42500 47.482 139 69 3 42 176 27 165 5.02e-42 144
MsG0580029068.01.T01 AT5G63870 30.744 309 151 11 71 317 79 386 2.39e-32 124
MsG0580029068.01.T01 AT5G63870 30.744 309 151 11 71 317 79 386 2.39e-32 124
MsG0580029068.01.T01 AT5G63870 33.032 221 111 7 71 255 79 298 1.79e-26 106
MsG0580029068.01.T01 AT1G48120 29.195 298 151 8 47 284 628 925 2.22e-26 110
MsG0580029068.01.T01 AT5G10900 29.851 268 140 9 68 293 222 483 2.16e-20 92.4
MsG0580029068.01.T01 AT5G10900 29.851 268 140 9 68 293 222 483 2.78e-20 92.0
MsG0580029068.01.T01 AT5G10900 29.851 268 140 9 68 293 222 483 3.04e-20 91.7

Find 22 sgRNAs with CRISPR-Local

Find 425 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGCCTCACTGGATGGATTT+AGG 0.121114 5:-91304712 None:intergenic
CATCTTTATCTGAATAAAAT+TGG 0.218359 5:-91304966 None:intergenic
GATGCCGTTGGTGGATTATA+TGG 0.252565 5:+91304985 MsG0580029068.01.T01:three_prime_UTR
ATCATTGATAGTCTGATAAT+TGG 0.272268 5:-91304915 None:intergenic
TGCCTCACTGGATGGATTTA+GGG 0.272826 5:-91304711 None:intergenic
GAGCATAATATAATGATTAT+AGG 0.308085 5:+91304736 MsG0580029068.01.T01:three_prime_UTR
AACATACATGTTTCCTGATA+AGG 0.420017 5:-91305037 None:intergenic
TCAGATAAAGATGCCGTTGG+TGG 0.502462 5:+91304976 MsG0580029068.01.T01:three_prime_UTR
CTGGCACAGATATGTTCGTC+AGG 0.526658 5:+91304617 MsG0580029068.01.T01:intron
TATTATGCTCAATGCCTCAC+TGG 0.526877 5:-91304723 None:intergenic
GGTGACAAATAAAATTGATA+CGG 0.541877 5:-91305016 None:intergenic
ATCTGCAGATGTAGATCGCA+TGG 0.551753 5:+91304650 MsG0580029068.01.T01:three_prime_UTR
ATGCTCAATGCCTCACTGGA+TGG 0.551963 5:-91304719 None:intergenic
TATTCAGATAAAGATGCCGT+TGG 0.552210 5:+91304973 MsG0580029068.01.T01:three_prime_UTR
ACTATCTTTGAGAACAAGGT+AGG 0.582286 5:-91304892 None:intergenic
TTGGACTATCTTTGAGAACA+AGG 0.591230 5:-91304896 None:intergenic
AAGGTTGACCATAAAAGCGA+AGG 0.602229 5:+91304773 MsG0580029068.01.T01:three_prime_UTR
ATAGGATGTTAAAACACCAA+AGG 0.607365 5:+91304754 MsG0580029068.01.T01:three_prime_UTR
GGTCAGTTATATCGATTCTG+AGG 0.643684 5:+91304671 MsG0580029068.01.T01:three_prime_UTR
CAGTTATATCGATTCTGAGG+TGG 0.666210 5:+91304674 MsG0580029068.01.T01:three_prime_UTR
AGAACCATATAATCCACCAA+CGG 0.702511 5:-91304989 None:intergenic
AACCCTAAATCCATCCAGTG+AGG 0.719598 5:+91304709 MsG0580029068.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAGATAAGAAAAA+AGG - Chr5:91300434-91300453 None:intergenic 10.0%
!! GTAAAAAATAAAAAACTAAA+CGG - Chr5:91304818-91304837 None:intergenic 10.0%
!! TAAAAATGAAAAATATCAAA+TGG - Chr5:91300710-91300729 None:intergenic 10.0%
!!! AAATATAAAAAGTATCAAAT+TGG - Chr5:91300466-91300485 None:intergenic 10.0%
!!! AATATAAAAAGTATCAAATT+GGG - Chr5:91300465-91300484 None:intergenic 10.0%
!!! ATTTGATACTTTTTATATTT+AGG + Chr5:91300466-91300485 MsG0580029068.01.T01:intron 10.0%
!!! TGGTTTAAAATATATTTTTA+CGG + Chr5:91300612-91300631 MsG0580029068.01.T01:intron 10.0%
!!! TTTGATACTTTTTATATTTA+GGG + Chr5:91300467-91300486 MsG0580029068.01.T01:intron 10.0%
!!! TTTTAAATATTCATGTTTTT+GGG + Chr5:91300391-91300410 MsG0580029068.01.T01:intron 10.0%
!!! TTTTTAAATATTCATGTTTT+TGG + Chr5:91300390-91300409 MsG0580029068.01.T01:intron 10.0%
!! AAAAACAAAAAACATCAAAA+TGG - Chr5:91300068-91300087 None:intergenic 15.0%
!! AAAACAAAAAACATCAAAAT+GGG - Chr5:91300067-91300086 None:intergenic 15.0%
!! AACATGAAAAATAAGAATAA+AGG - Chr5:91304535-91304554 None:intergenic 15.0%
!! AATCAAATTCATAAAATGAA+AGG - Chr5:91302689-91302708 None:intergenic 15.0%
!! ACTTGTTTAATCTAAAAATT+AGG - Chr5:91302807-91302826 None:intergenic 15.0%
!! TGAAAAATACAAGATAAAAA+AGG - Chr5:91300681-91300700 None:intergenic 15.0%
!!! AATTGAATGTACTATTTTAT+TGG + Chr5:91301309-91301328 MsG0580029068.01.T01:intron 15.0%
!!! ATATAAAAAGTATCAAATTG+GGG - Chr5:91300464-91300483 None:intergenic 15.0%
!!! ATCTAAATATTCATAACTTT+TGG + Chr5:91300892-91300911 MsG0580029068.01.T01:intron 15.0%
!!! ATTGATATTTTAGAAATCAA+AGG + Chr5:91302471-91302490 MsG0580029068.01.T01:intron 15.0%
!!! GATTTTATCAAATAATAATC+AGG + Chr5:91302705-91302724 MsG0580029068.01.T01:intron 15.0%
!!! TTCATTATTTGATATTTTTG+TGG + Chr5:91302349-91302368 MsG0580029068.01.T01:intron 15.0%
!!! TTTAAAACATTCATGTTTTT+GGG + Chr5:91300651-91300670 MsG0580029068.01.T01:intron 15.0%
!!! TTTAATTTGATTGATTAACA+AGG + Chr5:91300199-91300218 MsG0580029068.01.T01:intron 15.0%
!!! TTTGATGTTTTTTGTTTTTA+GGG + Chr5:91300069-91300088 MsG0580029068.01.T01:intron 15.0%
!!! TTTTAAAACATTCATGTTTT+TGG + Chr5:91300650-91300669 MsG0580029068.01.T01:intron 15.0%
!!! TTTTGATGTTTTTTGTTTTT+AGG + Chr5:91300068-91300087 MsG0580029068.01.T01:intron 15.0%
!!! TTTTTAATGTTGATGTTTTT+GGG + Chr5:91300504-91300523 MsG0580029068.01.T01:intron 15.0%
!!! TTTTTTAATGTTGATGTTTT+TGG + Chr5:91300503-91300522 MsG0580029068.01.T01:intron 15.0%
!! AAACAAAAAACATCAAAATG+GGG - Chr5:91300066-91300085 None:intergenic 20.0%
!! AATATACCACAAATCTTAAT+AGG - Chr5:91300019-91300038 None:intergenic 20.0%
!! AATATACCCTAAAATTCAAA+AGG - Chr5:91301105-91301124 None:intergenic 20.0%
!! AATGAATATATTGCAGTTAA+AGG - Chr5:91302335-91302354 None:intergenic 20.0%
!! AATGTAATGTCTTATATTGA+AGG - Chr5:91304213-91304232 None:intergenic 20.0%
!! ATAGAAAGAAAAAAAACACT+TGG - Chr5:91301064-91301083 None:intergenic 20.0%
!! ATGTAATGTCTTATATTGAA+GGG - Chr5:91304212-91304231 None:intergenic 20.0%
!! CATCTTTATCTGAATAAAAT+TGG - Chr5:91304969-91304988 None:intergenic 20.0%
!! GAGCATAATATAATGATTAT+AGG + Chr5:91304736-91304755 MsG0580029068.01.T01:three_prime_UTR 20.0%
!! GATTTCAACTAATTTGATAA+TGG - Chr5:91302641-91302660 None:intergenic 20.0%
!! TAAAAAACTAAACGGAAAAA+AGG - Chr5:91304810-91304829 None:intergenic 20.0%
!! TTCAATATAAGACATTACAT+TGG + Chr5:91304212-91304231 MsG0580029068.01.T01:intron 20.0%
!! TTCCAAATGAAGTAATTTAT+GGG + Chr5:91303746-91303765 MsG0580029068.01.T01:intron 20.0%
!!! AAAAATTGGTTTATCCTTTT+AGG + Chr5:91300988-91301007 MsG0580029068.01.T01:intron 20.0%
!!! AAAATTGGTTTATCCTTTTA+GGG + Chr5:91300989-91301008 MsG0580029068.01.T01:intron 20.0%
!!! AATTTGGAGCTTTTAATTTT+AGG + Chr5:91300294-91300313 MsG0580029068.01.T01:intron 20.0%
!!! ACTTTGTTTAGTTTTAGTTT+CGG + Chr5:91304477-91304496 MsG0580029068.01.T01:intron 20.0%
!!! AGTCTAATTATCTCTTTTTA+GGG + Chr5:91301436-91301455 MsG0580029068.01.T01:CDS 20.0%
!!! ATATTGCTTTGTTTAGTTTT+AGG + Chr5:91304441-91304460 MsG0580029068.01.T01:intron 20.0%
!!! ATGGTTTAATTTGTTACAAA+TGG - Chr5:91302951-91302970 None:intergenic 20.0%
!!! ATTTGGAGCTTTTAATTTTA+GGG + Chr5:91300295-91300314 MsG0580029068.01.T01:intron 20.0%
!!! ATTTTTGTGGTTTTTGAATT+GGG + Chr5:91302362-91302381 MsG0580029068.01.T01:intron 20.0%
!!! CTCTACTTAATTGTATTTTA+TGG + Chr5:91302660-91302679 MsG0580029068.01.T01:intron 20.0%
!!! GGGTTTAAAATACATTTTTA+GGG + Chr5:91300357-91300376 MsG0580029068.01.T01:intron 20.0%
!!! GTATATTTGATTGATTTGTA+GGG + Chr5:91300956-91300975 MsG0580029068.01.T01:intron 20.0%
!!! TATTACTAGTTTTGTATTGA+AGG - Chr5:91304288-91304307 None:intergenic 20.0%
!!! TATTTTTGTGGTTTTTGAAT+TGG + Chr5:91302361-91302380 MsG0580029068.01.T01:intron 20.0%
!!! TGAAAACTTTTTCCTTTTAA+GGG + Chr5:91301530-91301549 MsG0580029068.01.T01:CDS 20.0%
!!! TGGTTGAACATATATTTTTA+GGG + Chr5:91300856-91300875 MsG0580029068.01.T01:intron 20.0%
!!! TTAGAACCTTTTGAATTTTA+GGG + Chr5:91301096-91301115 MsG0580029068.01.T01:intron 20.0%
!!! TTTGAATTTTAGGGTATATT+TGG + Chr5:91301105-91301124 MsG0580029068.01.T01:intron 20.0%
!!! TTTTATTCTCTAATCTCTAT+AGG + Chr5:91303511-91303530 MsG0580029068.01.T01:intron 20.0%
!!! TTTTGGGTATCTTAATTTTT+GGG + Chr5:91300407-91300426 MsG0580029068.01.T01:intron 20.0%
!!! TTTTTAATGTTCATGCTTTT+GGG + Chr5:91300254-91300273 MsG0580029068.01.T01:intron 20.0%
!!! TTTTTGGGTATCTTAATTTT+TGG + Chr5:91300406-91300425 MsG0580029068.01.T01:intron 20.0%
!!! TTTTTTAATGTTCATGCTTT+TGG + Chr5:91300253-91300272 MsG0580029068.01.T01:intron 20.0%
!!! TTTTTTTTACGAAGGTTTTA+AGG + Chr5:91300172-91300191 MsG0580029068.01.T01:intron 20.0%
! AAAAAGAGATAATTAGACTG+AGG - Chr5:91301435-91301454 None:intergenic 25.0%
! AAAGCCATATATCCTATTAA+TGG - Chr5:91301574-91301593 None:intergenic 25.0%
! AAATATACGCTAAAACTGAA+AGG - Chr5:91300944-91300963 None:intergenic 25.0%
! AAATATATGCAAGAATCAAC+CGG - Chr5:91302899-91302918 None:intergenic 25.0%
! AAGAAATTTGATTCACACAA+AGG + Chr5:91303022-91303041 MsG0580029068.01.T01:intron 25.0%
! AAGGATTGAAAAAGAAAATG+TGG + Chr5:91300218-91300237 MsG0580029068.01.T01:intron 25.0%
! AGGGATTGAATAATAAAATG+TGG + Chr5:91301137-91301156 MsG0580029068.01.T01:intron 25.0%
! ATATGCCTTAAAAGCTAAAA+GGG - Chr5:91301167-91301186 None:intergenic 25.0%
! CTGTAGTTTAGATAATAACT+AGG + Chr5:91304405-91304424 MsG0580029068.01.T01:intron 25.0%
! GGGATTGAATAATAAAATGT+GGG + Chr5:91301138-91301157 MsG0580029068.01.T01:intron 25.0%
! GGTGACAAATAAAATTGATA+CGG - Chr5:91305019-91305038 None:intergenic 25.0%
! GTTCCAAATGAAGTAATTTA+TGG + Chr5:91303745-91303764 MsG0580029068.01.T01:intron 25.0%
! TACAATTGTAGATAGATTCA+TGG + Chr5:91302558-91302577 MsG0580029068.01.T01:intron 25.0%
! TACCCATAAATTACTTCATT+TGG - Chr5:91303751-91303770 None:intergenic 25.0%
! TAGGGATTGAAGAAAAAAAT+TGG + Chr5:91300974-91300993 MsG0580029068.01.T01:intron 25.0%
! TATATGCCTTAAAAGCTAAA+AGG - Chr5:91301168-91301187 None:intergenic 25.0%
! TTCCATTCCTTAATTAACTA+AGG + Chr5:91302245-91302264 MsG0580029068.01.T01:three_prime_UTR 25.0%
! TTTGTTTCAGAAAATCACAA+GGG - Chr5:91304127-91304146 None:intergenic 25.0%
!! AAAAAACATAGGTTGACTAT+TGG - Chr5:91302853-91302872 None:intergenic 25.0%
!! AAAAACATAGGTTGACTATT+GGG - Chr5:91302852-91302871 None:intergenic 25.0%
!! AATGTACTATTTTATTGGTC+TGG + Chr5:91301314-91301333 MsG0580029068.01.T01:intron 25.0%
!! ATCATTGATAGTCTGATAAT+TGG - Chr5:91304918-91304937 None:intergenic 25.0%
!! CAGTCTAATTATCTCTTTTT+AGG + Chr5:91301435-91301454 MsG0580029068.01.T01:CDS 25.0%
!! CTTAAAAGGAAAAAGTTTTC+AGG - Chr5:91301531-91301550 None:intergenic 25.0%
!! GTCTAATTATCTCTTTTTAG+GGG + Chr5:91301437-91301456 MsG0580029068.01.T01:CDS 25.0%
!! GTGGTTGAACATATATTTTT+AGG + Chr5:91300855-91300874 MsG0580029068.01.T01:intron 25.0%
!! GTTAGAACCTTTTGAATTTT+AGG + Chr5:91301095-91301114 MsG0580029068.01.T01:intron 25.0%
!! TGATTTTATAAGCAAGCAAA+AGG - Chr5:91301503-91301522 None:intergenic 25.0%
!! TGTTTAATGTTGATGCTTTT+AGG + Chr5:91300748-91300767 MsG0580029068.01.T01:intron 25.0%
!! TTTTACCTTCTTTGTGAAAA+AGG + Chr5:91301974-91301993 MsG0580029068.01.T01:intron 25.0%
!!! AAAGACTTGCTTTGTTTTTT+CGG + Chr5:91304311-91304330 MsG0580029068.01.T01:intron 25.0%
!!! AGTTTCAAGCTTTTAGTTTT+AGG + Chr5:91300789-91300808 MsG0580029068.01.T01:intron 25.0%
!!! ATAAAAAACCTTCGCTTTTA+TGG - Chr5:91304784-91304803 None:intergenic 25.0%
!!! ATGCTTAATTTGTTGCAATT+TGG + Chr5:91300278-91300297 MsG0580029068.01.T01:intron 25.0%
!!! ATTTTATTTGTCACCTTATC+AGG + Chr5:91305024-91305043 MsG0580029068.01.T01:three_prime_UTR 25.0%
!!! CGTATATTTGATTGATTTGT+AGG + Chr5:91300955-91300974 MsG0580029068.01.T01:intron 25.0%
!!! CTGAAAACTTTTTCCTTTTA+AGG + Chr5:91301529-91301548 MsG0580029068.01.T01:CDS 25.0%
!!! CTTTTAAGGCATATAAAGTT+TGG + Chr5:91301173-91301192 MsG0580029068.01.T01:intron 25.0%
!!! GAAAACTTTTTCCTTTTAAG+GGG + Chr5:91301531-91301550 MsG0580029068.01.T01:CDS 25.0%
!!! GGGGTTTAAAATACATTTTT+AGG + Chr5:91300356-91300375 MsG0580029068.01.T01:intron 25.0%
!!! GTATGTTTGATTTGATTGAT+TGG + Chr5:91300568-91300587 MsG0580029068.01.T01:intron 25.0%
!!! GTGTATTTGATTTGATTGTT+GGG + Chr5:91300317-91300336 MsG0580029068.01.T01:intron 25.0%
!!! GTTTCAAGCTTTTAGTTTTA+GGG + Chr5:91300790-91300809 MsG0580029068.01.T01:intron 25.0%
!!! GTTTGAATCTTTTGGTTTTA+TGG + Chr5:91300546-91300565 MsG0580029068.01.T01:intron 25.0%
!!! TCAACTAATTTGATAATGGT+TGG - Chr5:91302637-91302656 None:intergenic 25.0%
!!! TGATTTTTGTGGTCTTATAA+AGG + Chr5:91302292-91302311 MsG0580029068.01.T01:intron 25.0%
!!! TGTATTTGATTTGATTGTTG+GGG + Chr5:91300318-91300337 MsG0580029068.01.T01:intron 25.0%
!!! TTTAGTTGTTTCGTGATTTT+GGG + Chr5:91300106-91300125 MsG0580029068.01.T01:intron 25.0%
!!! TTTGATTTGATTGATTGGTA+GGG + Chr5:91300573-91300592 MsG0580029068.01.T01:intron 25.0%
!!! TTTGATTTGGTTGATTTGTA+GGG + Chr5:91300817-91300836 MsG0580029068.01.T01:intron 25.0%
!!! TTTGTTTTTAGGGTTTAGAA+TGG + Chr5:91300079-91300098 MsG0580029068.01.T01:intron 25.0%
!!! TTTTAGTTGTTTCGTGATTT+TGG + Chr5:91300105-91300124 MsG0580029068.01.T01:intron 25.0%
!!! TTTTGTTTCAGAAAATCACA+AGG - Chr5:91304128-91304147 None:intergenic 25.0%
AAAATGACACAATCCAAATG+AGG - Chr5:91302750-91302769 None:intergenic 30.0%
AAATTTGATTCACACAAAGG+AGG + Chr5:91303025-91303044 MsG0580029068.01.T01:intron 30.0%
AACATACATGTTTCCTGATA+AGG - Chr5:91305040-91305059 None:intergenic 30.0%
AACCAGACCTTAGTTAATTA+AGG - Chr5:91302255-91302274 None:intergenic 30.0%
AATATATGCAAGAATCAACC+GGG - Chr5:91302898-91302917 None:intergenic 30.0%
AGTTTATGATAGCAGTGATT+GGG + Chr5:91303540-91303559 MsG0580029068.01.T01:intron 30.0%
ATAGGATGTTAAAACACCAA+AGG + Chr5:91304754-91304773 MsG0580029068.01.T01:three_prime_UTR 30.0%
ATCATGGTTCAAATGAAGTT+TGG - Chr5:91304064-91304083 None:intergenic 30.0%
ATTCATGTAGTTGTTGAAGA+AGG - Chr5:91302526-91302545 None:intergenic 30.0%
CATTTCATTTCTGTTTACTC+TGG + Chr5:91304598-91304617 MsG0580029068.01.T01:intron 30.0%
CTAACTATATATGCCCTAAA+AGG - Chr5:91301005-91301024 None:intergenic 30.0%
GACCTTAGTTAATTAAGGAA+TGG - Chr5:91302250-91302269 None:intergenic 30.0%
GATGGTAACAAGTTTAGAAA+GGG + Chr5:91303778-91303797 MsG0580029068.01.T01:intron 30.0%
GCAGTTAAAAGATTCTGTAA+AGG - Chr5:91301640-91301659 None:intergenic 30.0%
GCTTCCATTAATAGGATATA+TGG + Chr5:91301567-91301586 MsG0580029068.01.T01:CDS 30.0%
GTAATCTGTAATCTTTCTAC+AGG + Chr5:91302031-91302050 MsG0580029068.01.T01:intron 30.0%
GTATATTTGGTTGTTTGGTA+GGG + Chr5:91301118-91301137 MsG0580029068.01.T01:intron 30.0%
TAACAGTAAAACTGAACACA+TGG - Chr5:91304563-91304582 None:intergenic 30.0%
TCATGGTTCAAATGAAGTTT+GGG - Chr5:91304063-91304082 None:intergenic 30.0%
TGACTTGAAAGACAAAACTA+GGG - Chr5:91302777-91302796 None:intergenic 30.0%
TGATGGTAACAAGTTTAGAA+AGG + Chr5:91303777-91303796 MsG0580029068.01.T01:intron 30.0%
TTAAGGCATATAAAGTTTGG+AGG + Chr5:91301176-91301195 MsG0580029068.01.T01:intron 30.0%
TTAGGGTATATTTGGTTGTT+TGG + Chr5:91301113-91301132 MsG0580029068.01.T01:intron 30.0%
TTAGTGTGAGAAGAAAAAAG+TGG + Chr5:91304027-91304046 MsG0580029068.01.T01:intron 30.0%
TTCCTTAATTAACTAAGGTC+TGG + Chr5:91302250-91302269 MsG0580029068.01.T01:intron 30.0%
TTTATGATGAATGTAAGCGA+AGG + Chr5:91301592-91301611 MsG0580029068.01.T01:CDS 30.0%
! AAATCCCTGTTTGAATTTTC+AGG + Chr5:91301351-91301370 MsG0580029068.01.T01:intron 30.0%
! ATTTATGGGTATAGTGTTGA+TGG + Chr5:91303760-91303779 MsG0580029068.01.T01:intron 30.0%
! TGTTGCAAGTTTGAATCTTT+TGG + Chr5:91300538-91300557 MsG0580029068.01.T01:intron 30.0%
! TTGACTTGAAAGACAAAACT+AGG - Chr5:91302778-91302797 None:intergenic 30.0%
! TTGATTTGATTGATTGGTAG+GGG + Chr5:91300574-91300593 MsG0580029068.01.T01:intron 30.0%
! TTTTGCAAGTTTGTAGCTTT+TGG + Chr5:91300140-91300159 MsG0580029068.01.T01:intron 30.0%
!! ACTATTTTATTGGTCTGGTA+TGG + Chr5:91301319-91301338 MsG0580029068.01.T01:intron 30.0%
!! AGTTTTGTATTGAAGGACTT+TGG - Chr5:91304281-91304300 None:intergenic 30.0%
!! CATGGTGTTAGATTTTTAAG+AGG + Chr5:91302576-91302595 MsG0580029068.01.T01:intron 30.0%
!! CTAAACTTGTGTTGCTTTAA+TGG + Chr5:91301997-91302016 MsG0580029068.01.T01:intron 30.0%
!! GCGTTTGAATTTGATTTTTG+TGG + Chr5:91302281-91302300 MsG0580029068.01.T01:intron 30.0%
!! GGTGTATTTGATTTGATTGT+TGG + Chr5:91300316-91300335 MsG0580029068.01.T01:intron 30.0%
!! GTTTGATTTGATTGATTGGT+AGG + Chr5:91300572-91300591 MsG0580029068.01.T01:intron 30.0%
!! GTTTGATTTGGTTGATTTGT+AGG + Chr5:91300816-91300835 MsG0580029068.01.T01:intron 30.0%
!! TAAAAAGTATCAAATTGGGG+TGG - Chr5:91300461-91300480 None:intergenic 30.0%
!! TTTAGCCTTTTTCACAAAGA+AGG - Chr5:91301982-91302001 None:intergenic 30.0%
!! TTTTTAAGAGGTTCATGTAG+TGG + Chr5:91302588-91302607 MsG0580029068.01.T01:intron 30.0%
!!! AATTTTCAGGTGACATTCAT+GGG + Chr5:91301364-91301383 MsG0580029068.01.T01:intron 30.0%
!!! AGTTTGTAGCTTTTGGTTTT+AGG + Chr5:91300147-91300166 MsG0580029068.01.T01:intron 30.0%
!!! ATGAAGATTGTTTTGGTTTG+AGG + Chr5:91303917-91303936 MsG0580029068.01.T01:intron 30.0%
!!! CTTTTAGGGCATATATAGTT+AGG + Chr5:91301003-91301022 MsG0580029068.01.T01:intron 30.0%
!!! GTTTGTAGCTTTTGGTTTTA+GGG + Chr5:91300148-91300167 MsG0580029068.01.T01:intron 30.0%
!!! GTTTTAGGGTATGTTTGATT+TGG + Chr5:91300804-91300823 MsG0580029068.01.T01:intron 30.0%
!!! TGAAGATTGTTTTGGTTTGA+GGG + Chr5:91303918-91303937 MsG0580029068.01.T01:intron 30.0%
!!! TGAAGTGGAAGTTCTTTTTT+TGG + Chr5:91303087-91303106 MsG0580029068.01.T01:intron 30.0%
!!! TTTAGGGGTTTTTTTTACGA+AGG + Chr5:91300164-91300183 MsG0580029068.01.T01:intron 30.0%
!!! TTTGTAGCTTTTGGTTTTAG+GGG + Chr5:91300149-91300168 MsG0580029068.01.T01:intron 30.0%
AAAAAGAATGACACGAAGGA+GGG - Chr5:91301958-91301977 None:intergenic 35.0%
AAAAATTCAGCCACCTTATC+AGG - Chr5:91301873-91301892 None:intergenic 35.0%
AAAATATTGTGCATGCATGG+TGG + Chr5:91301687-91301706 MsG0580029068.01.T01:CDS 35.0%
AAAATTCAGCCACCTTATCA+GGG - Chr5:91301872-91301891 None:intergenic 35.0%
AACAACAAAACACAGTAACG+CGG + Chr5:91299674-91299693 MsG0580029068.01.T01:five_prime_UTR 35.0%
AAGAACAACAACGAAGCAAA+GGG - Chr5:91299758-91299777 None:intergenic 35.0%
AAGAGATAATTAGACTGAGG+AGG - Chr5:91301432-91301451 None:intergenic 35.0%
AATCTTTCTACAGGTTGTAG+AGG + Chr5:91302040-91302059 MsG0580029068.01.T01:intron 35.0%
ACTCATGATTTCCCCTTAAA+AGG - Chr5:91301545-91301564 None:intergenic 35.0%
ACTTGATGAGAAAAAAGTGG+TGG + Chr5:91303703-91303722 MsG0580029068.01.T01:intron 35.0%
AGAACCATATAATCCACCAA+CGG - Chr5:91304992-91305011 None:intergenic 35.0%
AGGGATTGAAGAAGAAAATG+TGG + Chr5:91300836-91300855 MsG0580029068.01.T01:intron 35.0%
AGGTAAAAAGAATGACACGA+AGG - Chr5:91301962-91301981 None:intergenic 35.0%
AGGTAAGAGATTGATGAGTT+TGG + Chr5:91303661-91303680 MsG0580029068.01.T01:intron 35.0%
AGTAAAACTGAACACATGGA+TGG - Chr5:91304559-91304578 None:intergenic 35.0%
ATGAGTGTGCTTCCATTAAT+AGG + Chr5:91301559-91301578 MsG0580029068.01.T01:CDS 35.0%
GAAGCTCCTATTAAGATTTG+TGG + Chr5:91300010-91300029 MsG0580029068.01.T01:CDS 35.0%
GACTTGAAAGACAAAACTAG+GGG - Chr5:91302776-91302795 None:intergenic 35.0%
GAGAAAATATTGTGCATGCA+TGG + Chr5:91301684-91301703 MsG0580029068.01.T01:CDS 35.0%
GAGTTTATGATAGCAGTGAT+TGG + Chr5:91303539-91303558 MsG0580029068.01.T01:intron 35.0%
GGATCATGTTAACAGTATCA+TGG - Chr5:91304080-91304099 None:intergenic 35.0%
GGTAAGAGATTGATGAGTTT+GGG + Chr5:91303662-91303681 MsG0580029068.01.T01:intron 35.0%
GGTATATTTGGTTGTTTGGT+AGG + Chr5:91301117-91301136 MsG0580029068.01.T01:intron 35.0%
GTAAGAGATTGATGAGTTTG+GGG + Chr5:91303663-91303682 MsG0580029068.01.T01:intron 35.0%
GTCACCTGAAAATTCAAACA+GGG - Chr5:91301358-91301377 None:intergenic 35.0%
TAAAAAGAATGACACGAAGG+AGG - Chr5:91301959-91301978 None:intergenic 35.0%
TAGCTTACTCAACTTAGTAG+CGG - Chr5:91303257-91303276 None:intergenic 35.0%
TATTCAGATAAAGATGCCGT+TGG + Chr5:91304973-91304992 MsG0580029068.01.T01:three_prime_UTR 35.0%
TCAAATTCACCACAGTAGTT+TGG - Chr5:91302116-91302135 None:intergenic 35.0%
TCACAAATTTGGACCAAATC+CGG + Chr5:91301724-91301743 MsG0580029068.01.T01:CDS 35.0%
TGATAGCTATGGACTTATGA+TGG + Chr5:91303478-91303497 MsG0580029068.01.T01:intron 35.0%
TGATGTCAAACAAGATGTGA+TGG + Chr5:91302222-91302241 MsG0580029068.01.T01:CDS 35.0%
TGCAAAGAAGATAGTACAGT+GGG + Chr5:91303607-91303626 MsG0580029068.01.T01:intron 35.0%
TGGGGATTGAAGAAGAAAAT+GGG + Chr5:91300336-91300355 MsG0580029068.01.T01:intron 35.0%
TGGTGATTCTATGATAGCTA+TGG + Chr5:91303467-91303486 MsG0580029068.01.T01:intron 35.0%
TGTCACCTGAAAATTCAAAC+AGG - Chr5:91301359-91301378 None:intergenic 35.0%
TGTTAAGGCTCTTTGAGTAT+GGG + Chr5:91301400-91301419 MsG0580029068.01.T01:CDS 35.0%
TTGCAAAGAAGATAGTACAG+TGG + Chr5:91303606-91303625 MsG0580029068.01.T01:intron 35.0%
TTGGGGATTGAAGAAGAAAA+TGG + Chr5:91300335-91300354 MsG0580029068.01.T01:intron 35.0%
TTGTTAAGGCTCTTTGAGTA+TGG + Chr5:91301399-91301418 MsG0580029068.01.T01:CDS 35.0%
! AATCCCTTTTCAAAGGAAGA+TGG - Chr5:91304009-91304028 None:intergenic 35.0%
! ACTATCTTTGAGAACAAGGT+AGG - Chr5:91304895-91304914 None:intergenic 35.0%
! ATAAGCAAGCAAAAGGCATA+TGG - Chr5:91301496-91301515 None:intergenic 35.0%
! ATCACCATCTTCCTTTGAAA+AGG + Chr5:91304002-91304021 MsG0580029068.01.T01:intron 35.0%
! ATTTTTGACAAGGCATGACT+TGG + Chr5:91301887-91301906 MsG0580029068.01.T01:CDS 35.0%
! CAAAATGGGGTGTCAAAAAA+GGG - Chr5:91300053-91300072 None:intergenic 35.0%
! GCAGTAATGATTCTGAGAAA+GGG - Chr5:91304190-91304209 None:intergenic 35.0%
! GCTTCAAGTTCAAGCAAATT+AGG - Chr5:91299995-91300014 None:intergenic 35.0%
! TCAAAATGGGGTGTCAAAAA+AGG - Chr5:91300054-91300073 None:intergenic 35.0%
! TCACACTAATCCCTTTTCAA+AGG - Chr5:91304016-91304035 None:intergenic 35.0%
! TCACCATCTTCCTTTGAAAA+GGG + Chr5:91304003-91304022 MsG0580029068.01.T01:intron 35.0%
! TCGACTTGATGAGAAAAAAG+TGG + Chr5:91303700-91303719 MsG0580029068.01.T01:intron 35.0%
! TTGGACTATCTTTGAGAACA+AGG - Chr5:91304899-91304918 None:intergenic 35.0%
! TTGTTGAAGAAGGTATAAGC+TGG - Chr5:91302516-91302535 None:intergenic 35.0%
!! TCAGGCTTAATTTGCATTTC+TGG + Chr5:91302723-91302742 MsG0580029068.01.T01:intron 35.0%
!! TGAGCTAGAAGAGTATCTAA+AGG - Chr5:91303284-91303303 None:intergenic 35.0%
!!! AACTTTGTTTTCTTCTCTGC+AGG - Chr5:91302200-91302219 None:intergenic 35.0%
!!! AGAGGTGTTTTATGAGATGA+TGG + Chr5:91303836-91303855 MsG0580029068.01.T01:intron 35.0%
!!! CAACCTATGTTTTTTCGACA+TGG + Chr5:91302858-91302877 MsG0580029068.01.T01:intron 35.0%
!!! GAATTTTCAGGTGACATTCA+TGG + Chr5:91301363-91301382 MsG0580029068.01.T01:intron 35.0%
!!! GGTTACCCTTTTAGCTTTTA+AGG + Chr5:91301159-91301178 MsG0580029068.01.T01:intron 35.0%
AAAGAACTTCCACTTCAGCT+TGG - Chr5:91303084-91303103 None:intergenic 40.0%
AAATCCGAAGTTGAAGAGGT+GGG - Chr5:91303182-91303201 None:intergenic 40.0%
AAGACGATTGAGGAAGATGA+AGG + Chr5:91303369-91303388 MsG0580029068.01.T01:intron 40.0%
AAGGTTGACCATAAAAGCGA+AGG + Chr5:91304773-91304792 MsG0580029068.01.T01:three_prime_UTR 40.0%
ACTAGCCACTAAGCTAAGAA+AGG + Chr5:91304149-91304168 MsG0580029068.01.T01:intron 40.0%
AGACGATTGAGGAAGATGAA+GGG + Chr5:91303370-91303389 MsG0580029068.01.T01:intron 40.0%
AGACTGAATCAGTTGCACTT+GGG + Chr5:91303120-91303139 MsG0580029068.01.T01:intron 40.0%
CAAGAACAACAACGAAGCAA+AGG - Chr5:91299759-91299778 None:intergenic 40.0%
CTAGCCACTAAGCTAAGAAA+GGG + Chr5:91304150-91304169 MsG0580029068.01.T01:intron 40.0%
CTTAGTAGCGGTTTCTTCTT+CGG - Chr5:91303245-91303264 None:intergenic 40.0%
CTTCTCAGAAATGGAACATG+TGG + Chr5:91303213-91303232 MsG0580029068.01.T01:intron 40.0%
CTTGTGAATGCTTTGTCGTT+TGG + Chr5:91304340-91304359 MsG0580029068.01.T01:intron 40.0%
GATCCTGGTAAAGATGTGAA+GGG + Chr5:91301807-91301826 MsG0580029068.01.T01:CDS 40.0%
GCAAAGAAGATAGTACAGTG+GGG + Chr5:91303608-91303627 MsG0580029068.01.T01:intron 40.0%
GGGGATTGAAGAAGAAAATG+GGG + Chr5:91300337-91300356 MsG0580029068.01.T01:intron 40.0%
GGTATGAATTCTTTGCAGAC+AGG + Chr5:91302066-91302085 MsG0580029068.01.T01:CDS 40.0%
GTTAAGGCTCTTTGAGTATG+GGG + Chr5:91301401-91301420 MsG0580029068.01.T01:CDS 40.0%
TATGGGTGGTGACATAGTAA+TGG + Chr5:91303403-91303422 MsG0580029068.01.T01:intron 40.0%
TATTATGCTCAATGCCTCAC+TGG - Chr5:91304726-91304745 None:intergenic 40.0%
TCAGAATCAATGAGTGCACA+AGG + Chr5:91299800-91299819 MsG0580029068.01.T01:intron 40.0%
TGATCCTGGTAAAGATGTGA+AGG + Chr5:91301806-91301825 MsG0580029068.01.T01:CDS 40.0%
TGGTAAAGATGTGAAGGGTT+GGG + Chr5:91301812-91301831 MsG0580029068.01.T01:CDS 40.0%
TGTGGTGAATTTGACAATGC+TGG + Chr5:91302122-91302141 MsG0580029068.01.T01:CDS 40.0%
TTAAGGCTCTTTGAGTATGG+GGG + Chr5:91301402-91301421 MsG0580029068.01.T01:CDS 40.0%
TTACCAACTGTCAATGCCAA+TGG - Chr5:91304252-91304271 None:intergenic 40.0%
TTAGTAGCGGTTTCTTCTTC+GGG - Chr5:91303244-91303263 None:intergenic 40.0%
TTCTACAGGTTGTAGAGGAT+GGG + Chr5:91302045-91302064 MsG0580029068.01.T01:intron 40.0%
TTTCTACAGGTTGTAGAGGA+TGG + Chr5:91302044-91302063 MsG0580029068.01.T01:intron 40.0%
TTTGTCGGATAAGACGATTG+AGG + Chr5:91303359-91303378 MsG0580029068.01.T01:intron 40.0%
TTTGTGGAAGCTCAATGAGA+TGG - Chr5:91302970-91302989 None:intergenic 40.0%
! AACATAGGTTGACTATTGGG+TGG - Chr5:91302849-91302868 None:intergenic 40.0%
! AGGTGGCTGAATTTTTGACA+AGG + Chr5:91301877-91301896 MsG0580029068.01.T01:CDS 40.0%
! CCATTTCTGAGAAGACAGTT+GGG - Chr5:91303207-91303226 None:intergenic 40.0%
! GATAACTGAACTTGCTTTCC+AGG - Chr5:91299917-91299936 None:intergenic 40.0%
! GATGGGCATGAAGATTGTTT+TGG + Chr5:91303910-91303929 MsG0580029068.01.T01:intron 40.0%
! GGATTTGGTCCAAATTTGTG+AGG - Chr5:91301725-91301744 None:intergenic 40.0%
! GGCAGTAATGATTCTGAGAA+AGG - Chr5:91304191-91304210 None:intergenic 40.0%
! GTAATGGAGGAAGAAGATGA+TGG + Chr5:91303419-91303438 MsG0580029068.01.T01:intron 40.0%
! TCCATTTCTGAGAAGACAGT+TGG - Chr5:91303208-91303227 None:intergenic 40.0%
! TGGGATGATCGCAAATGTTT+TGG + Chr5:91303447-91303466 MsG0580029068.01.T01:intron 40.0%
! TTTTCAGCTCCAAACTACTG+TGG + Chr5:91302104-91302123 MsG0580029068.01.T01:CDS 40.0%
!! AGACGTGTAGCTTGTTGTTA+AGG + Chr5:91301262-91301281 MsG0580029068.01.T01:intron 40.0%
!! AGTGTTGTGTTGGTTTGCTT+TGG - Chr5:91299718-91299737 None:intergenic 40.0%
!! ATCTTTTAACTGCCTTCCTG+TGG + Chr5:91301647-91301666 MsG0580029068.01.T01:CDS 40.0%
!! ATTGGCATTGACAGTTGGTA+AGG + Chr5:91304251-91304270 MsG0580029068.01.T01:intron 40.0%
!! CAGTTATATCGATTCTGAGG+TGG + Chr5:91304674-91304693 MsG0580029068.01.T01:three_prime_UTR 40.0%
!! GAAGAGGTTGATGATTGGAT+GGG + Chr5:91303871-91303890 MsG0580029068.01.T01:intron 40.0%
!! GGCAGTACAGTGATTTGTTA+AGG + Chr5:91301385-91301404 MsG0580029068.01.T01:CDS 40.0%
!! GGTCAGTTATATCGATTCTG+AGG + Chr5:91304671-91304690 MsG0580029068.01.T01:three_prime_UTR 40.0%
!! TCGCTTTTATGGTCAACCTT+TGG - Chr5:91304773-91304792 None:intergenic 40.0%
!! TGAAGAGGTTGATGATTGGA+TGG + Chr5:91303870-91303889 MsG0580029068.01.T01:intron 40.0%
!! TTGCATTTCTGGTCCTCATT+TGG + Chr5:91302734-91302753 MsG0580029068.01.T01:intron 40.0%
!! TTGTGTTGGTTTGCTTTGGT+TGG - Chr5:91299714-91299733 None:intergenic 40.0%
!!! CCTATGTTTTTTCGACATGG+CGG + Chr5:91302861-91302880 MsG0580029068.01.T01:intron 40.0%
!!! TGTTTTGGTTTGAGGGAGAT+GGG + Chr5:91303925-91303944 MsG0580029068.01.T01:intron 40.0%
!!! TTGTTTTGGTTTGAGGGAGA+TGG + Chr5:91303924-91303943 MsG0580029068.01.T01:intron 40.0%
AACCCTAAATCCATCCAGTG+AGG + Chr5:91304709-91304728 MsG0580029068.01.T01:three_prime_UTR 45.0%
ACACAACACTCTCTCTTGGT+TGG + Chr5:91299728-91299747 MsG0580029068.01.T01:five_prime_UTR 45.0%
ACCAACACAACACTCTCTCT+TGG + Chr5:91299724-91299743 MsG0580029068.01.T01:five_prime_UTR 45.0%
AGGGGTTGAAGAAGCAAAAG+TGG + Chr5:91300592-91300611 MsG0580029068.01.T01:intron 45.0%
ATCACAGAGCAAACCAGTGT+CGG - Chr5:91301775-91301794 None:intergenic 45.0%
ATCCCTATCCATACACCCTT+GGG + Chr5:91304096-91304115 MsG0580029068.01.T01:intron 45.0%
ATCTGCAGATGTAGATCGCA+TGG + Chr5:91304650-91304669 MsG0580029068.01.T01:three_prime_UTR 45.0%
ATGAAGGGCAGTGACTAGTA+TGG + Chr5:91303385-91303404 MsG0580029068.01.T01:intron 45.0%
ATGATTGGATGGGCATGGAA+GGG + Chr5:91303881-91303900 MsG0580029068.01.T01:intron 45.0%
CAAATCCGAAGTTGAAGAGG+TGG - Chr5:91303183-91303202 None:intergenic 45.0%
CAACCCTTCACATCTTTACC+AGG - Chr5:91301813-91301832 None:intergenic 45.0%
CAGACTGAATCAGTTGCACT+TGG + Chr5:91303119-91303138 MsG0580029068.01.T01:intron 45.0%
CCACTAAGCTAAGAAAGGGA+GGG + Chr5:91304154-91304173 MsG0580029068.01.T01:intron 45.0%
CCCAACTGTCTTCTCAGAAA+TGG + Chr5:91303204-91303223 MsG0580029068.01.T01:intron 45.0%
CCGCCATGTCGAAAAAACAT+AGG - Chr5:91302864-91302883 None:intergenic 45.0%
CCTGATGAGCACGACAAATA+AGG - Chr5:91301914-91301933 None:intergenic 45.0%
CGTCTTATCCGACAAAACGT+TGG - Chr5:91303355-91303374 None:intergenic 45.0%
CTCATTGAGCTTCCACAAAG+CGG + Chr5:91302971-91302990 MsG0580029068.01.T01:intron 45.0%
CTGGTAAAGATGTGAAGGGT+TGG + Chr5:91301811-91301830 MsG0580029068.01.T01:CDS 45.0%
GAAGGTTTAACGTGAGGCTT+TGG + Chr5:91301610-91301629 MsG0580029068.01.T01:CDS 45.0%
GATAGTACAGTGGGGTGTAT+CGG + Chr5:91303616-91303635 MsG0580029068.01.T01:intron 45.0%
GCTTTCCAGGTCGAGATAAT+CGG - Chr5:91299904-91299923 None:intergenic 45.0%
GGAGATATCACACTGTCCAT+TGG + Chr5:91304233-91304252 MsG0580029068.01.T01:intron 45.0%
GGTAAAGATGTGAAGGGTTG+GGG + Chr5:91301813-91301832 MsG0580029068.01.T01:CDS 45.0%
GGTCAAATCCGAAGTTGAAG+AGG - Chr5:91303186-91303205 None:intergenic 45.0%
GGTCCAAATTTGTGAGGTCA+GGG - Chr5:91301719-91301738 None:intergenic 45.0%
GTAAGCGAAGGTTTAACGTG+AGG + Chr5:91301604-91301623 MsG0580029068.01.T01:CDS 45.0%
GTCCAAATTTGTGAGGTCAG+GGG - Chr5:91301718-91301737 None:intergenic 45.0%
GTTTGCTCTGTGATCTGCTT+TGG + Chr5:91301781-91301800 MsG0580029068.01.T01:CDS 45.0%
TCAGATAAAGATGCCGTTGG+TGG + Chr5:91304976-91304995 MsG0580029068.01.T01:three_prime_UTR 45.0%
TCATCTATAAGAGCTGCCAC+AGG - Chr5:91301666-91301685 None:intergenic 45.0%
TCATTGAGCTTCCACAAAGC+GGG + Chr5:91302972-91302991 MsG0580029068.01.T01:intron 45.0%
TCTCTGCAGGCTTAAGAATC+TGG - Chr5:91302187-91302206 None:intergenic 45.0%
TGAAGGGCAGTGACTAGTAT+GGG + Chr5:91303386-91303405 MsG0580029068.01.T01:intron 45.0%
TGATCCCACCTCTTCAACTT+CGG + Chr5:91303175-91303194 MsG0580029068.01.T01:intron 45.0%
TGCAGGCTTAAGAATCTGGA+AGG - Chr5:91302183-91302202 None:intergenic 45.0%
TGGTCCAAATTTGTGAGGTC+AGG - Chr5:91301720-91301739 None:intergenic 45.0%
TTCCCCTGACCTCACAAATT+TGG + Chr5:91301713-91301732 MsG0580029068.01.T01:CDS 45.0%
! AATCACAAGGGTGTATCCCA+AGG - Chr5:91304115-91304134 None:intergenic 45.0%
! ATCACAAGGGTGTATCCCAA+GGG - Chr5:91304114-91304133 None:intergenic 45.0%
! ATCCCAAGGGTGTATGGATA+GGG - Chr5:91304101-91304120 None:intergenic 45.0%
! ATGCCTCACTGGATGGATTT+AGG - Chr5:91304715-91304734 None:intergenic 45.0%
! ATGGAGGAAGAAGATGATGG+AGG + Chr5:91303422-91303441 MsG0580029068.01.T01:intron 45.0%
! ATGGCGGAAAAGAAAATGCC+CGG + Chr5:91302877-91302896 MsG0580029068.01.T01:intron 45.0%
! CCTTATTTGTCGTGCTCATC+AGG + Chr5:91301911-91301930 MsG0580029068.01.T01:CDS 45.0%
! CGGTGTTGGATGACATTATC+CGG + Chr5:91299864-91299883 MsG0580029068.01.T01:CDS 45.0%
! CTACACTTTTGGCCCTGATA+AGG + Chr5:91301857-91301876 MsG0580029068.01.T01:CDS 45.0%
! CTTATCAGGGCCAAAAGTGT+AGG - Chr5:91301859-91301878 None:intergenic 45.0%
! GAGATTGATGAGTTTGGGGT+TGG + Chr5:91303667-91303686 MsG0580029068.01.T01:intron 45.0%
! GCAACTGATTCAGTCTGTGA+GGG - Chr5:91303116-91303135 None:intergenic 45.0%
! TATCCCAAGGGTGTATGGAT+AGG - Chr5:91304102-91304121 None:intergenic 45.0%
! TGCAACTGATTCAGTCTGTG+AGG - Chr5:91303117-91303136 None:intergenic 45.0%
! TGCCTCACTGGATGGATTTA+GGG - Chr5:91304714-91304733 None:intergenic 45.0%
! TGGTGTGTTGTTAGTGTGTG+TGG + Chr5:91303723-91303742 MsG0580029068.01.T01:intron 45.0%
! TTTTGTGAAGCTTTCGCGAG+AGG + Chr5:91303818-91303837 MsG0580029068.01.T01:intron 45.0%
!! ACCAAGAGAGAGTGTTGTGT+TGG - Chr5:91299728-91299747 None:intergenic 45.0%
!! GAAGAAGATGATGGAGGTGT+GGG + Chr5:91303428-91303447 MsG0580029068.01.T01:intron 45.0%
!! GAGGTGAAGAGGTTGATGAT+TGG + Chr5:91303866-91303885 MsG0580029068.01.T01:intron 45.0%
!! GAGTTTGGGGTTGGCAATTT+TGG + Chr5:91303676-91303695 MsG0580029068.01.T01:intron 45.0%
!! GATGCCGTTGGTGGATTATA+TGG + Chr5:91304985-91305004 MsG0580029068.01.T01:three_prime_UTR 45.0%
!! GGTGTGTTGGTTGTATCTTG+CGG + Chr5:91303575-91303594 MsG0580029068.01.T01:intron 45.0%
!! TGTCCATTGGCATTGACAGT+TGG + Chr5:91304246-91304265 MsG0580029068.01.T01:intron 45.0%
!!! AGAGGAGTGTCCTACACTTT+TGG + Chr5:91301846-91301865 MsG0580029068.01.T01:CDS 45.0%
AACCAACCTCCAAGCTGAAG+TGG + Chr5:91303072-91303091 MsG0580029068.01.T01:intron 50.0%
AAGAATGACACGAAGGAGGG+AGG - Chr5:91301955-91301974 None:intergenic 50.0%
ACCAGCTCAGGTGATTGATG+AGG + Chr5:91299841-91299860 MsG0580029068.01.T01:CDS 50.0%
AGCTCAGGTGATTGATGAGG+CGG + Chr5:91299844-91299863 MsG0580029068.01.T01:CDS 50.0%
ATGCTCAATGCCTCACTGGA+TGG - Chr5:91304722-91304741 None:intergenic 50.0%
CATTGAGCTTCCACAAAGCG+GGG + Chr5:91302973-91302992 MsG0580029068.01.T01:intron 50.0%
CCCTCCCTTTCTTAGCTTAG+TGG - Chr5:91304157-91304176 None:intergenic 50.0%
CTATAAGAGCTGCCACAGGA+AGG - Chr5:91301662-91301681 None:intergenic 50.0%
CTGGCACAGATATGTTCGTC+AGG + Chr5:91304617-91304636 MsG0580029068.01.T01:intron 50.0%
GAACTTCCACTTCAGCTTGG+AGG - Chr5:91303081-91303100 None:intergenic 50.0%
GATCCCTATCCATACACCCT+TGG + Chr5:91304095-91304114 MsG0580029068.01.T01:intron 50.0%
GATCTGCTTTGGTCTGATCC+TGG + Chr5:91301792-91301811 MsG0580029068.01.T01:CDS 50.0%
GATGATTGGATGGGCATGGA+AGG + Chr5:91303880-91303899 MsG0580029068.01.T01:intron 50.0%
GCAGTGATTGGGTATAGTCG+TGG + Chr5:91303551-91303570 MsG0580029068.01.T01:intron 50.0%
GCCACTAAGCTAAGAAAGGG+AGG + Chr5:91304153-91304172 MsG0580029068.01.T01:intron 50.0%
GGGTGGTGACATAGTAATGG+AGG + Chr5:91303406-91303425 MsG0580029068.01.T01:intron 50.0%
GGTTGGGGCATGAATGATAG+AGG + Chr5:91301828-91301847 MsG0580029068.01.T01:CDS 50.0%
GTGATTGGGTATAGTCGTGG+TGG + Chr5:91303554-91303573 MsG0580029068.01.T01:intron 50.0%
TAGGGGACTATGTCGATCGT+GGG + Chr5:91301454-91301473 MsG0580029068.01.T01:CDS 50.0%
TCAATCACCTGAGCTGGTTG+CGG - Chr5:91299839-91299858 None:intergenic 50.0%
TCACAGAGCAAACCAGTGTC+GGG - Chr5:91301774-91301793 None:intergenic 50.0%
TGAAGAGGTGGGATCAAAGC+TGG - Chr5:91303171-91303190 None:intergenic 50.0%
TGACATTATCCGGCGACTCA+CGG + Chr5:91299874-91299893 MsG0580029068.01.T01:CDS 50.0%
TGATTGGATGGGCATGGAAG+GGG + Chr5:91303882-91303901 MsG0580029068.01.T01:intron 50.0%
TGCTGGTGCAATGATGAGTG+TGG + Chr5:91302139-91302158 MsG0580029068.01.T01:CDS 50.0%
TTAGGGGACTATGTCGATCG+TGG + Chr5:91301453-91301472 MsG0580029068.01.T01:CDS 50.0%
TTCCACTTCAGCTTGGAGGT+TGG - Chr5:91303077-91303096 None:intergenic 50.0%
! ACGCATGACTTGTGAGAGGT+GGG + Chr5:91303955-91303974 MsG0580029068.01.T01:intron 50.0%
! ACTTCAGCTTGGAGGTTGGT+TGG - Chr5:91303073-91303092 None:intergenic 50.0%
! AGCAAACCAGTGTCGGGAAT+AGG - Chr5:91301768-91301787 None:intergenic 50.0%
! CACTTTTGGCCCTGATAAGG+TGG + Chr5:91301860-91301879 MsG0580029068.01.T01:CDS 50.0%
! CTCTGTGGCCAACGTTTTGT+CGG + Chr5:91303344-91303363 MsG0580029068.01.T01:intron 50.0%
! GTATAGTCGTGGTGGTGTGT+TGG + Chr5:91303562-91303581 MsG0580029068.01.T01:intron 50.0%
! TTGGTTTGAGGGAGATGGGT+GGG + Chr5:91303929-91303948 MsG0580029068.01.T01:intron 50.0%
!! ATGAGATGATGGTGTCGCAG+AGG + Chr5:91303847-91303866 MsG0580029068.01.T01:intron 50.0%
!! GGAAGAAGATGATGGAGGTG+TGG + Chr5:91303427-91303446 MsG0580029068.01.T01:intron 50.0%
!! GGTTGATGATTGGATGGGCA+TGG + Chr5:91303876-91303895 MsG0580029068.01.T01:intron 50.0%
!! TTTGGTTTGAGGGAGATGGG+TGG + Chr5:91303928-91303947 MsG0580029068.01.T01:intron 50.0%
!!! GCTTGGAGGTTGGTTGGTTT+TGG - Chr5:91303067-91303086 None:intergenic 50.0%
AAACGTTGGCCACAGAGGCA+AGG - Chr5:91303341-91303360 None:intergenic 55.0%
AACGTTGGCCACAGAGGCAA+GGG - Chr5:91303340-91303359 None:intergenic 55.0%
AGGGCAGTGACTAGTATGGG+TGG + Chr5:91303389-91303408 MsG0580029068.01.T01:intron 55.0%
ATTGGATGGGCATGGAAGGG+GGG + Chr5:91303884-91303903 MsG0580029068.01.T01:intron 55.0%
CCAGTTCCTATTCCCGACAC+TGG + Chr5:91301759-91301778 MsG0580029068.01.T01:CDS 55.0%
CGACAAAACGTTGGCCACAG+AGG - Chr5:91303346-91303365 None:intergenic 55.0%
GAACTGGACGAGGCAGATTC+CGG - Chr5:91301746-91301765 None:intergenic 55.0%
GACGAGGCAGATTCCGGATT+TGG - Chr5:91301740-91301759 None:intergenic 55.0%
GAGGTCCGATTATCTCGACC+TGG + Chr5:91299896-91299915 MsG0580029068.01.T01:CDS 55.0%
GATTGGATGGGCATGGAAGG+GGG + Chr5:91303883-91303902 MsG0580029068.01.T01:intron 55.0%
GCCTCATCAATCACCTGAGC+TGG - Chr5:91299845-91299864 None:intergenic 55.0%
GGTGATTGATGAGGCGGTGT+TGG + Chr5:91299850-91299869 MsG0580029068.01.T01:CDS 55.0%
TCGGGAATAGGAACTGGACG+AGG - Chr5:91301756-91301775 None:intergenic 55.0%
TGGGATCAAAGCTGGTGTGC+TGG - Chr5:91303163-91303182 None:intergenic 55.0%
! CCAGTGTCGGGAATAGGAAC+TGG - Chr5:91301762-91301781 None:intergenic 55.0%
! GACGCATGACTTGTGAGAGG+TGG + Chr5:91303954-91303973 MsG0580029068.01.T01:intron 55.0%
! GGGTGTATCCCAAGGGTGTA+TGG - Chr5:91304107-91304126 None:intergenic 55.0%
! GTGGACGCATGACTTGTGAG+AGG + Chr5:91303951-91303970 MsG0580029068.01.T01:intron 55.0%
!! ATGGTGTCGCAGAGGTGAAG+AGG + Chr5:91303855-91303874 MsG0580029068.01.T01:intron 55.0%
!! CAAAGCTGGTGTGCTGGCTA+GGG - Chr5:91303157-91303176 None:intergenic 55.0%
!! TCAAAGCTGGTGTGCTGGCT+AGG - Chr5:91303158-91303177 None:intergenic 55.0%
ACCACAACCGCAACCAGCTC+AGG + Chr5:91299829-91299848 MsG0580029068.01.T01:CDS 60.0%
ACCTGAGCTGGTTGCGGTTG+TGG - Chr5:91299833-91299852 None:intergenic 60.0%
ACTGTGAGCTCCCCGCTTTG+TGG - Chr5:91302986-91303005 None:intergenic 60.0%
CATTATCCGGCGACTCACGG+AGG + Chr5:91299877-91299896 MsG0580029068.01.T01:CDS 60.0%
GCATGGAAGGGGGGTTGGAT+GGG + Chr5:91303893-91303912 MsG0580029068.01.T01:intron 60.0%
GTTTGAGGGAGATGGGTGGG+TGG + Chr5:91303932-91303951 MsG0580029068.01.T01:intron 60.0%
TGAGCTGGTTGCGGTTGTGG+TGG - Chr5:91299830-91299849 None:intergenic 60.0%
AGTGAGCGCCCTTGCCTCTG+TGG + Chr5:91303329-91303348 MsG0580029068.01.T01:intron 65.0%
ATCGGACCTCCGTGAGTCGC+CGG - Chr5:91299886-91299905 None:intergenic 65.0%
GATGGGCATGGAAGGGGGGT+TGG + Chr5:91303888-91303907 MsG0580029068.01.T01:intron 65.0%
GGCATGGAAGGGGGGTTGGA+TGG + Chr5:91303892-91303911 MsG0580029068.01.T01:intron 65.0%
!! CAGAGGCAAGGGCGCTCACT+TGG - Chr5:91303329-91303348 None:intergenic 65.0%
!! GGCAAGGGCGCTCACTTGGA+AGG - Chr5:91303325-91303344 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 91299654 91305092 91299654 ID=MsG0580029068.01;Name=MsG0580029068.01
Chr5 mRNA 91299654 91305092 91299654 ID=MsG0580029068.01.T01;Parent=MsG0580029068.01;Name=MsG0580029068.01.T01;_AED=0.38;_eAED=0.38;_QI=155|1|1|1|0.66|0.75|4|492|323
Chr5 exon 91304626 91305092 91304626 ID=MsG0580029068.01.T01:exon:26253;Parent=MsG0580029068.01.T01
Chr5 five_prime_UTR 91299654 91299808 91299654 ID=MsG0580029068.01.T01:five_prime_utr;Parent=MsG0580029068.01.T01
Chr5 CDS 91299809 91300031 91299809 ID=MsG0580029068.01.T01:cds;Parent=MsG0580029068.01.T01
Chr5 CDS 91301373 91301932 91301373 ID=MsG0580029068.01.T01:cds;Parent=MsG0580029068.01.T01
Chr5 CDS 91302053 91302241 91302053 ID=MsG0580029068.01.T01:cds;Parent=MsG0580029068.01.T01
Chr5 three_prime_UTR 91302242 91302266 91302242 ID=MsG0580029068.01.T01:three_prime_utr;Parent=MsG0580029068.01.T01
Chr5 three_prime_UTR 91304626 91305092 91304626 ID=MsG0580029068.01.T01:three_prime_utr;Parent=MsG0580029068.01.T01
Chr5 mRNA 91299654 91305046 91299654 ID=MsG0580029068.01.T02;Parent=MsG0580029068.01;Name=MsG0580029068.01.T02;_AED=0.38;_eAED=0.38;_QI=155|1|1|1|0.66|0.5|4|433|323
Chr5 exon 91304639 91305046 91304639 ID=MsG0580029068.01.T02:exon:26254;Parent=MsG0580029068.01.T02
Chr5 five_prime_UTR 91299654 91299808 91299654 ID=MsG0580029068.01.T02:five_prime_utr;Parent=MsG0580029068.01.T02
Chr5 CDS 91299809 91300031 91299809 ID=MsG0580029068.01.T02:cds;Parent=MsG0580029068.01.T02
Chr5 CDS 91301373 91301932 91301373 ID=MsG0580029068.01.T02:cds;Parent=MsG0580029068.01.T02
Chr5 CDS 91302053 91302241 91302053 ID=MsG0580029068.01.T02:cds;Parent=MsG0580029068.01.T02
Chr5 three_prime_UTR 91302242 91302266 91302242 ID=MsG0580029068.01.T02:three_prime_utr;Parent=MsG0580029068.01.T02
Chr5 three_prime_UTR 91304639 91305046 91304639 ID=MsG0580029068.01.T02:three_prime_utr;Parent=MsG0580029068.01.T02
Gene Sequence

>MsG0580029068.01.T02

ATGAGTGCACAAGGACAACCACCACAACCGCAACCAGCTCAGGTGATTGATGAGGCGGTGTTGGATGACATTATCCGGCGACTCACGGAGGTCCGATTATCTCGACCTGGAAAGCAAGTTCAGTTATCTGAAGCTGAGATCAAGCAGCTTTGTTCTGCTTCTAGAGATATCTTTCTTCAACAACCTAATTTGCTTGAACTTGAAGCTCCTATTAAGATTTGTGGTGACATTCATGGGCAGTACAGTGATTTGTTAAGGCTCTTTGAGTATGGGGGTTTGCCTCCTCAGTCTAATTATCTCTTTTTAGGGGACTATGTCGATCGTGGGAAGCAGAGCTTAGAAACCATATGCCTTTTGCTTGCTTATAAAATCAAATATCCTGAAAACTTTTTCCTTTTAAGGGGAAATCATGAGTGTGCTTCCATTAATAGGATATATGGCTTTTATGATGAATGTAAGCGAAGGTTTAACGTGAGGCTTTGGAAAGCCTTTACAGAATCTTTTAACTGCCTTCCTGTGGCAGCTCTTATAGATGAGAAAATATTGTGCATGCATGGTGGTCTTTCCCCTGACCTCACAAATTTGGACCAAATCCGGAATCTGCCTCGTCCAGTTCCTATTCCCGACACTGGTTTGCTCTGTGATCTGCTTTGGTCTGATCCTGGTAAAGATGTGAAGGGTTGGGGCATGAATGATAGAGGAGTGTCCTACACTTTTGGCCCTGATAAGGTGGCTGAATTTTTGACAAGGCATGACTTGGACCTTATTTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAATTCTTTGCAGACAGGCAACTTGTTACGATATTTTCAGCTCCAAACTACTGTGGTGAATTTGACAATGCTGGTGCAATGATGAGTGTGGACGAGAACTTGATGTGCTCCTTCCAGATTCTTAAGCCTGCAGAGAAGAAAACAAAGTTCGTGATGTCAAACAAGATGTGA

>MsG0580029068.01.T01

ATGAGTGCACAAGGACAACCACCACAACCGCAACCAGCTCAGGTGATTGATGAGGCGGTGTTGGATGACATTATCCGGCGACTCACGGAGGTCCGATTATCTCGACCTGGAAAGCAAGTTCAGTTATCTGAAGCTGAGATCAAGCAGCTTTGTTCTGCTTCTAGAGATATCTTTCTTCAACAACCTAATTTGCTTGAACTTGAAGCTCCTATTAAGATTTGTGGTGACATTCATGGGCAGTACAGTGATTTGTTAAGGCTCTTTGAGTATGGGGGTTTGCCTCCTCAGTCTAATTATCTCTTTTTAGGGGACTATGTCGATCGTGGGAAGCAGAGCTTAGAAACCATATGCCTTTTGCTTGCTTATAAAATCAAATATCCTGAAAACTTTTTCCTTTTAAGGGGAAATCATGAGTGTGCTTCCATTAATAGGATATATGGCTTTTATGATGAATGTAAGCGAAGGTTTAACGTGAGGCTTTGGAAAGCCTTTACAGAATCTTTTAACTGCCTTCCTGTGGCAGCTCTTATAGATGAGAAAATATTGTGCATGCATGGTGGTCTTTCCCCTGACCTCACAAATTTGGACCAAATCCGGAATCTGCCTCGTCCAGTTCCTATTCCCGACACTGGTTTGCTCTGTGATCTGCTTTGGTCTGATCCTGGTAAAGATGTGAAGGGTTGGGGCATGAATGATAGAGGAGTGTCCTACACTTTTGGCCCTGATAAGGTGGCTGAATTTTTGACAAGGCATGACTTGGACCTTATTTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAATTCTTTGCAGACAGGCAACTTGTTACGATATTTTCAGCTCCAAACTACTGTGGTGAATTTGACAATGCTGGTGCAATGATGAGTGTGGACGAGAACTTGATGTGCTCCTTCCAGATTCTTAAGCCTGCAGAGAAGAAAACAAAGTTCGTGATGTCAAACAAGATGTGA
Protein sequence

>MsG0580029068.01.T02

MSAQGQPPQPQPAQVIDEAVLDDIIRRLTEVRLSRPGKQVQLSEAEIKQLCSASRDIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPQSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTESFNCLPVAALIDEKILCMHGGLSPDLTNLDQIRNLPRPVPIPDTGLLCDLLWSDPGKDVKGWGMNDRGVSYTFGPDKVAEFLTRHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKTKFVMSNKM*

>MsG0580029068.01.T01

MSAQGQPPQPQPAQVIDEAVLDDIIRRLTEVRLSRPGKQVQLSEAEIKQLCSASRDIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPQSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTESFNCLPVAALIDEKILCMHGGLSPDLTNLDQIRNLPRPVPIPDTGLLCDLLWSDPGKDVKGWGMNDRGVSYTFGPDKVAEFLTRHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKTKFVMSNKM*