Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041521.01.T01 | XP_003626230.2 | 98.423 | 317 | 5 | 0 | 1 | 317 | 1 | 317 | 0 | 640 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041521.01.T01 | P48490 | 90.096 | 313 | 30 | 1 | 5 | 317 | 1 | 312 | 0 | 590 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041521.01.T01 | G7KXK9 | 98.423 | 317 | 5 | 0 | 1 | 317 | 1 | 317 | 0.0 | 640 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780041122.01 | MsG0780041521.01 | PPI |
| MsG0580029068.01 | MsG0780041521.01 | PPI |
| MsG0580029877.01 | MsG0780041521.01 | PPI |
| MsG0780041521.01 | MsG0580029068.01 | PPI |
| MsG0580025989.01 | MsG0780041521.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041521.01.T01 | MTR_7g112870 | 98.423 | 317 | 5 | 0 | 1 | 317 | 1 | 317 | 0.0 | 640 |
| MsG0780041521.01.T01 | MTR_1g079950 | 75.235 | 319 | 73 | 2 | 1 | 313 | 26 | 344 | 0.0 | 506 |
| MsG0780041521.01.T01 | MTR_1g079950 | 75.556 | 315 | 71 | 2 | 5 | 313 | 1 | 315 | 3.12e-180 | 501 |
| MsG0780041521.01.T01 | MTR_1g079950 | 75.556 | 315 | 71 | 2 | 5 | 313 | 1 | 315 | 4.39e-180 | 500 |
| MsG0780041521.01.T01 | MTR_1g079950 | 75.556 | 315 | 71 | 2 | 5 | 313 | 1 | 315 | 9.73e-180 | 499 |
| MsG0780041521.01.T01 | MTR_7g116380 | 74.921 | 315 | 73 | 2 | 5 | 313 | 1 | 315 | 1.35e-177 | 494 |
| MsG0780041521.01.T01 | MTR_7g116380 | 74.921 | 315 | 73 | 2 | 5 | 313 | 1 | 315 | 1.98e-177 | 494 |
| MsG0780041521.01.T01 | MTR_8g098980 | 72.500 | 320 | 79 | 3 | 5 | 317 | 1 | 318 | 4.10e-177 | 493 |
| MsG0780041521.01.T01 | MTR_5g081230 | 76.923 | 299 | 66 | 1 | 5 | 300 | 17 | 315 | 5.94e-172 | 479 |
| MsG0780041521.01.T01 | MTR_1g074880 | 72.727 | 308 | 78 | 2 | 5 | 306 | 1 | 308 | 4.53e-171 | 478 |
| MsG0780041521.01.T01 | MTR_1g074880 | 72.727 | 308 | 78 | 2 | 5 | 306 | 1 | 308 | 8.77e-171 | 476 |
| MsG0780041521.01.T01 | MTR_1g043240 | 71.565 | 313 | 83 | 3 | 5 | 312 | 1 | 312 | 7.62e-169 | 472 |
| MsG0780041521.01.T01 | MTR_8g005010 | 74.048 | 289 | 73 | 1 | 10 | 296 | 4 | 292 | 7.36e-165 | 461 |
| MsG0780041521.01.T01 | MTR_1g079950 | 79.116 | 249 | 48 | 1 | 62 | 306 | 34 | 282 | 9.52e-151 | 426 |
| MsG0780041521.01.T01 | MTR_1g074880 | 76.000 | 250 | 56 | 1 | 61 | 306 | 4 | 253 | 1.98e-145 | 410 |
| MsG0780041521.01.T01 | MTR_1g074880 | 76.000 | 250 | 56 | 1 | 61 | 306 | 4 | 253 | 3.52e-145 | 409 |
| MsG0780041521.01.T01 | MTR_8g062430 | 46.154 | 299 | 154 | 3 | 10 | 307 | 7 | 299 | 1.28e-95 | 285 |
| MsG0780041521.01.T01 | MTR_7g107310 | 46.392 | 291 | 149 | 3 | 10 | 299 | 14 | 298 | 1.70e-94 | 283 |
| MsG0780041521.01.T01 | MTR_5g037200 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 2.10e-94 | 282 |
| MsG0780041521.01.T01 | MTR_5g093990 | 47.331 | 281 | 147 | 1 | 28 | 307 | 17 | 297 | 3.83e-93 | 279 |
| MsG0780041521.01.T01 | MTR_8g085610 | 46.392 | 291 | 149 | 3 | 10 | 299 | 9 | 293 | 4.04e-93 | 279 |
| MsG0780041521.01.T01 | MTR_8g085610 | 46.840 | 269 | 141 | 2 | 32 | 299 | 2 | 269 | 7.89e-90 | 270 |
| MsG0780041521.01.T01 | MTR_1g039380 | 44.643 | 280 | 147 | 4 | 10 | 287 | 3 | 276 | 7.47e-88 | 265 |
| MsG0780041521.01.T01 | MTR_1g039380 | 46.400 | 250 | 131 | 3 | 40 | 287 | 4 | 252 | 7.20e-85 | 257 |
| MsG0780041521.01.T01 | MTR_2g087530 | 47.078 | 308 | 144 | 6 | 8 | 296 | 639 | 946 | 5.27e-80 | 262 |
| MsG0780041521.01.T01 | MTR_1g089370 | 43.068 | 339 | 164 | 8 | 5 | 315 | 524 | 861 | 1.26e-79 | 259 |
| MsG0780041521.01.T01 | MTR_4g050540 | 46.926 | 309 | 145 | 6 | 7 | 296 | 643 | 951 | 3.59e-79 | 259 |
| MsG0780041521.01.T01 | MTR_2g087530 | 45.625 | 320 | 155 | 6 | 7 | 307 | 525 | 844 | 1.97e-78 | 256 |
| MsG0780041521.01.T01 | MTR_3g452710 | 41.786 | 280 | 155 | 5 | 8 | 281 | 169 | 446 | 2.46e-71 | 229 |
| MsG0780041521.01.T01 | MTR_3g452710 | 41.786 | 280 | 155 | 5 | 8 | 281 | 236 | 513 | 1.35e-70 | 228 |
| MsG0780041521.01.T01 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 87 | 365 | 2.49e-68 | 219 |
| MsG0780041521.01.T01 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 186 | 464 | 2.35e-67 | 219 |
| MsG0780041521.01.T01 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 196 | 474 | 3.21e-67 | 219 |
| MsG0780041521.01.T01 | MTR_2g100130 | 40.569 | 281 | 158 | 6 | 8 | 281 | 157 | 435 | 3.63e-67 | 218 |
| MsG0780041521.01.T01 | MTR_2g100130 | 38.889 | 306 | 167 | 7 | 8 | 295 | 196 | 499 | 3.68e-67 | 219 |
| MsG0780041521.01.T01 | MTR_2g100130 | 38.889 | 306 | 166 | 8 | 8 | 295 | 157 | 459 | 7.67e-66 | 214 |
| MsG0780041521.01.T01 | MTR_2g100130 | 38.889 | 306 | 166 | 8 | 8 | 295 | 196 | 498 | 8.97e-66 | 215 |
| MsG0780041521.01.T01 | MTR_2g100130 | 41.111 | 270 | 150 | 6 | 8 | 270 | 196 | 463 | 9.66e-66 | 214 |
| MsG0780041521.01.T01 | MTR_2g100160 | 37.829 | 304 | 176 | 7 | 6 | 298 | 104 | 405 | 6.31e-61 | 200 |
| MsG0780041521.01.T01 | MTR_5g037200 | 49.730 | 185 | 87 | 2 | 10 | 193 | 7 | 186 | 8.98e-60 | 191 |
| MsG0780041521.01.T01 | MTR_8g072600 | 30.938 | 320 | 155 | 11 | 42 | 299 | 119 | 434 | 2.01e-34 | 130 |
| MsG0780041521.01.T01 | MTR_8g072600 | 32.900 | 231 | 115 | 7 | 42 | 236 | 119 | 345 | 2.69e-28 | 112 |
| MsG0780041521.01.T01 | MTR_2g099710 | 30.417 | 240 | 126 | 9 | 61 | 270 | 244 | 472 | 1.49e-18 | 86.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780041521.01.T01 | AT5G27840 | 87.066 | 317 | 36 | 1 | 1 | 317 | 5 | 316 | 0.0 | 570 |
| MsG0780041521.01.T01 | AT3G05580 | 87.066 | 317 | 36 | 1 | 1 | 317 | 5 | 316 | 0.0 | 570 |
| MsG0780041521.01.T01 | AT5G27840 | 87.742 | 310 | 38 | 0 | 1 | 310 | 5 | 314 | 0.0 | 567 |
| MsG0780041521.01.T01 | AT5G27840 | 90.909 | 297 | 27 | 0 | 1 | 297 | 5 | 301 | 0.0 | 566 |
| MsG0780041521.01.T01 | AT5G27840 | 90.909 | 297 | 27 | 0 | 1 | 297 | 5 | 301 | 0.0 | 566 |
| MsG0780041521.01.T01 | AT3G46820 | 75.166 | 302 | 71 | 1 | 2 | 299 | 6 | 307 | 7.41e-174 | 484 |
| MsG0780041521.01.T01 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 7.91e-174 | 484 |
| MsG0780041521.01.T01 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 7.91e-174 | 484 |
| MsG0780041521.01.T01 | AT5G59160 | 75.578 | 303 | 70 | 1 | 2 | 300 | 6 | 308 | 7.91e-174 | 484 |
| MsG0780041521.01.T01 | AT2G39840 | 76.254 | 299 | 68 | 1 | 5 | 300 | 14 | 312 | 1.33e-173 | 484 |
| MsG0780041521.01.T01 | AT2G29400 | 75.083 | 301 | 69 | 2 | 5 | 300 | 15 | 314 | 1.07e-172 | 481 |
| MsG0780041521.01.T01 | AT1G64040 | 72.013 | 318 | 84 | 2 | 5 | 317 | 1 | 318 | 1.43e-172 | 481 |
| MsG0780041521.01.T01 | AT4G11240 | 69.811 | 318 | 91 | 2 | 5 | 317 | 1 | 318 | 1.90e-169 | 473 |
| MsG0780041521.01.T01 | AT3G05580 | 89.516 | 248 | 26 | 0 | 1 | 248 | 5 | 252 | 1.83e-168 | 468 |
| MsG0780041521.01.T01 | AT5G43380 | 70.846 | 319 | 86 | 3 | 5 | 316 | 1 | 319 | 1.57e-166 | 466 |
| MsG0780041521.01.T01 | AT5G43380 | 70.846 | 319 | 86 | 3 | 5 | 316 | 1 | 319 | 3.34e-166 | 465 |
| MsG0780041521.01.T01 | AT5G43380 | 70.846 | 319 | 86 | 3 | 5 | 316 | 1 | 319 | 7.26e-166 | 464 |
| MsG0780041521.01.T01 | AT2G42500 | 47.635 | 296 | 147 | 4 | 6 | 299 | 9 | 298 | 9.29e-97 | 288 |
| MsG0780041521.01.T01 | AT5G55260 | 47.405 | 289 | 146 | 2 | 28 | 315 | 17 | 300 | 5.02e-96 | 286 |
| MsG0780041521.01.T01 | AT3G58500 | 47.079 | 291 | 147 | 3 | 10 | 299 | 14 | 298 | 2.02e-95 | 285 |
| MsG0780041521.01.T01 | AT1G10430 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 1.36e-94 | 283 |
| MsG0780041521.01.T01 | AT1G10430 | 46.488 | 299 | 153 | 3 | 10 | 307 | 7 | 299 | 1.36e-94 | 283 |
| MsG0780041521.01.T01 | AT1G69960 | 45.485 | 299 | 156 | 3 | 10 | 307 | 8 | 300 | 1.88e-94 | 282 |
| MsG0780041521.01.T01 | AT1G59830 | 45.485 | 299 | 156 | 3 | 10 | 307 | 7 | 299 | 8.40e-93 | 278 |
| MsG0780041521.01.T01 | AT4G26720 | 45.985 | 274 | 147 | 1 | 28 | 300 | 17 | 290 | 1.01e-92 | 278 |
| MsG0780041521.01.T01 | AT5G55260 | 41.515 | 330 | 146 | 3 | 28 | 315 | 17 | 341 | 1.33e-87 | 266 |
| MsG0780041521.01.T01 | AT3G19980 | 44.643 | 280 | 147 | 4 | 10 | 287 | 3 | 276 | 2.53e-87 | 264 |
| MsG0780041521.01.T01 | AT1G50370 | 44.286 | 280 | 148 | 4 | 10 | 287 | 3 | 276 | 2.59e-87 | 264 |
| MsG0780041521.01.T01 | AT1G59830 | 48.988 | 247 | 119 | 3 | 10 | 255 | 7 | 247 | 1.26e-81 | 248 |
| MsG0780041521.01.T01 | AT4G03080 | 45.779 | 308 | 150 | 7 | 5 | 296 | 526 | 832 | 1.78e-79 | 259 |
| MsG0780041521.01.T01 | AT2G27210 | 43.363 | 339 | 161 | 7 | 7 | 314 | 644 | 982 | 1.47e-77 | 255 |
| MsG0780041521.01.T01 | AT2G27210 | 43.363 | 339 | 161 | 7 | 7 | 314 | 649 | 987 | 1.54e-77 | 255 |
| MsG0780041521.01.T01 | AT1G08420 | 45.000 | 320 | 157 | 6 | 7 | 307 | 655 | 974 | 1.18e-76 | 253 |
| MsG0780041521.01.T01 | AT1G08420 | 45.000 | 320 | 157 | 6 | 7 | 307 | 660 | 979 | 1.22e-76 | 253 |
| MsG0780041521.01.T01 | AT1G03445 | 40.356 | 337 | 174 | 9 | 4 | 315 | 451 | 785 | 1.70e-76 | 249 |
| MsG0780041521.01.T01 | AT2G42500 | 50.455 | 220 | 107 | 2 | 81 | 299 | 33 | 251 | 2.66e-76 | 234 |
| MsG0780041521.01.T01 | AT1G03445 | 41.956 | 317 | 166 | 8 | 4 | 304 | 451 | 765 | 4.05e-76 | 248 |
| MsG0780041521.01.T01 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.28e-69 | 224 |
| MsG0780041521.01.T01 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.28e-69 | 224 |
| MsG0780041521.01.T01 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 167 | 448 | 2.28e-69 | 224 |
| MsG0780041521.01.T01 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 220 | 501 | 6.95e-69 | 224 |
| MsG0780041521.01.T01 | AT2G42810 | 42.160 | 287 | 155 | 6 | 1 | 281 | 221 | 502 | 7.66e-69 | 224 |
| MsG0780041521.01.T01 | AT2G42500 | 45.882 | 170 | 82 | 4 | 6 | 170 | 9 | 173 | 3.72e-46 | 154 |
| MsG0780041521.01.T01 | AT2G42500 | 45.763 | 177 | 84 | 5 | 6 | 177 | 9 | 178 | 4.78e-46 | 154 |
| MsG0780041521.01.T01 | AT2G42500 | 47.531 | 162 | 75 | 4 | 6 | 162 | 9 | 165 | 3.24e-45 | 152 |
| MsG0780041521.01.T01 | AT5G63870 | 32.581 | 310 | 148 | 9 | 51 | 299 | 73 | 382 | 2.50e-37 | 138 |
| MsG0780041521.01.T01 | AT5G63870 | 32.581 | 310 | 148 | 9 | 51 | 299 | 73 | 382 | 2.50e-37 | 138 |
| MsG0780041521.01.T01 | AT5G63870 | 34.513 | 226 | 113 | 5 | 51 | 241 | 73 | 298 | 3.04e-31 | 119 |
| MsG0780041521.01.T01 | AT1G48120 | 30.537 | 298 | 143 | 8 | 35 | 270 | 630 | 925 | 1.37e-26 | 110 |
| MsG0780041521.01.T01 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 6.44e-21 | 93.6 |
| MsG0780041521.01.T01 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 7.22e-21 | 93.6 |
| MsG0780041521.01.T01 | AT5G10900 | 30.153 | 262 | 141 | 11 | 57 | 279 | 225 | 483 | 8.26e-21 | 93.2 |
Find 85 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTCCCCGCCATAATT+TGG | 0.189229 | 7:-91960791 | None:intergenic |
| AAACCTGCTGATAAAGAATT+TGG | 0.231736 | 7:+91960872 | MsG0780041521.01.T01:CDS |
| CGAGGTGTTTCGTGTACTTT+TGG | 0.244051 | 7:+91959956 | MsG0780041521.01.T01:CDS |
| GCTGCAAATTACTTGTTTCT+TGG | 0.257569 | 7:+91959545 | MsG0780041521.01.T01:CDS |
| ATATTCTCTGCCCCAAATTA+TGG | 0.268724 | 7:+91960779 | MsG0780041521.01.T01:CDS |
| CAAATTCCCCGCCATAATTT+GGG | 0.269829 | 7:-91960790 | None:intergenic |
| GAACTACCCATGCATCCTTT+TGG | 0.292799 | 7:+91961198 | MsG0780041521.01.T01:three_prime_UTR |
| GGTTTATCTTTGCATCTTCA+TGG | 0.299589 | 7:-91959667 | None:intergenic |
| ACAAGTATTTCGGTTCAAAT+AGG | 0.308597 | 7:+91961053 | MsG0780041521.01.T01:three_prime_UTR |
| AATTTCAACTTTGAGTTAGT+TGG | 0.322678 | 7:-91961079 | None:intergenic |
| GGAGACTATATGCTTGCTTT+TGG | 0.332948 | 7:+91959598 | MsG0780041521.01.T01:CDS |
| ATGATCTTGATCTTATTTGC+AGG | 0.336140 | 7:+91960011 | MsG0780041521.01.T01:CDS |
| TAGTCATTCTACAAGTATTT+CGG | 0.336513 | 7:+91961043 | MsG0780041521.01.T01:three_prime_UTR |
| TTCTATGACATTTATGTGAA+TGG | 0.337049 | 7:+91961329 | MsG0780041521.01.T01:three_prime_UTR |
| GTCTCTTGTGCGATCTGCTT+TGG | 0.337128 | 7:+91959891 | MsG0780041521.01.T01:CDS |
| GAGACCGCTGTCTGGAATTT+CGG | 0.338263 | 7:-91959873 | None:intergenic |
| GCAAAGATAAACCGAATATA+TGG | 0.352537 | 7:+91959677 | MsG0780041521.01.T01:CDS |
| GATAGAGTTTATCTCTTAAG+AGG | 0.369598 | 7:+91959641 | MsG0780041521.01.T01:CDS |
| AGACAGAGGGAAGCAAAGTT+TGG | 0.370499 | 7:+91959577 | MsG0780041521.01.T01:CDS |
| ACCAGTTCATTGCTTGTGTT+TGG | 0.395308 | 7:+91961248 | MsG0780041521.01.T01:three_prime_UTR |
| CGATTGCTTTAACTGTTTGC+CGG | 0.396470 | 7:+91959754 | MsG0780041521.01.T01:CDS |
| AAGAAGATTGTTAGAAGGAA+AGG | 0.405161 | 7:+91958496 | MsG0780041521.01.T01:CDS |
| CAAATTGCAAAATTGTATAA+TGG | 0.406925 | 7:+91961151 | MsG0780041521.01.T01:three_prime_UTR |
| TGATCCTAACGCTGAGGGTT+GGG | 0.411650 | 7:+91959922 | MsG0780041521.01.T01:CDS |
| TCTTATTTGCAGGGGTCATC+AGG | 0.413370 | 7:+91960021 | MsG0780041521.01.T01:CDS |
| GTAAAAGGAGGTTCAATGTT+AGG | 0.413611 | 7:+91959714 | MsG0780041521.01.T01:CDS |
| TTCTTATAGGTTGTGGAGGA+TGG | 0.418589 | 7:+91960722 | MsG0780041521.01.T01:intron |
| GGCCTACAAAATAAGATATC+CGG | 0.419399 | 7:+91959619 | MsG0780041521.01.T01:CDS |
| AACGACAATGGAAGGAGAAA+TGG | 0.424864 | 7:+91958448 | None:intergenic |
| GTGATAAGAAGATTGTTAGA+AGG | 0.438726 | 7:+91958491 | MsG0780041521.01.T01:CDS |
| CTTCCAAATTCTTTATCAGC+AGG | 0.440807 | 7:-91960875 | None:intergenic |
| CGTGCTCCCATCCGCATTTG+CGG | 0.444802 | 7:+91958614 | MsG0780041521.01.T01:CDS |
| CTTAAGAGATAAACTCTATC+CGG | 0.451063 | 7:-91959638 | None:intergenic |
| GACTAGATCTATCCCTGTGC+AGG | 0.453447 | 7:-91961025 | None:intergenic |
| CAACCCTCAGCGTTAGGATC+AGG | 0.455754 | 7:-91959920 | None:intergenic |
| AATCATTGCTCCTGCCCAAA+AGG | 0.455907 | 7:-91961213 | None:intergenic |
| CTGCATGCAGGTGATATTCA+TGG | 0.458163 | 7:+91959473 | MsG0780041521.01.T01:intron |
| TCGCACAAGAGACCGCTGTC+TGG | 0.467988 | 7:-91959881 | None:intergenic |
| TCTGCCCAACCCTCAGCGTT+AGG | 0.475726 | 7:-91959926 | None:intergenic |
| GCACGAAGATCGAGAAGAAT+AGG | 0.484459 | 7:-91958596 | None:intergenic |
| CGAGAAGAATAGGTTGAGAG+AGG | 0.490202 | 7:-91958586 | None:intergenic |
| AGAAGATTGTTAGAAGGAAA+GGG | 0.491790 | 7:+91958497 | MsG0780041521.01.T01:CDS |
| TTTGCAATTTGCAACTTGAA+AGG | 0.492115 | 7:-91961139 | None:intergenic |
| GGAGGTTCAATGTTAGGCTA+TGG | 0.496598 | 7:+91959720 | MsG0780041521.01.T01:CDS |
| CTCCTGCCCAAAAGGATGCA+TGG | 0.509482 | 7:-91961205 | None:intergenic |
| CGGCAAACAGTTAAAGCAAT+CGG | 0.514394 | 7:-91959753 | None:intergenic |
| TGATCTTGATCTTATTTGCA+GGG | 0.521526 | 7:+91960012 | MsG0780041521.01.T01:CDS |
| GGAAGGAGAAATGGACAAAA+CGG | 0.528497 | 7:+91958457 | MsG0780041521.01.T01:CDS |
| TCCTGCCCAAAAGGATGCAT+GGG | 0.529585 | 7:-91961204 | None:intergenic |
| CTGATCCTAACGCTGAGGGT+TGG | 0.537776 | 7:+91959921 | MsG0780041521.01.T01:CDS |
| GCCAAACACAAGCAATGAAC+TGG | 0.541466 | 7:-91961249 | None:intergenic |
| CAAAGTTGAAATTGTCGAGT+AGG | 0.542264 | 7:+91961089 | MsG0780041521.01.T01:three_prime_UTR |
| TACTAACCGCAAATGCGGAT+GGG | 0.543656 | 7:-91958620 | None:intergenic |
| AGAAACAAGTAATTTGCAGC+TGG | 0.546090 | 7:-91959542 | None:intergenic |
| GGCATAGGAACGACAATGGA+AGG | 0.548710 | 7:+91958440 | None:intergenic |
| TAGATCTATCCCTGTGCAGG+GGG | 0.550107 | 7:-91961022 | None:intergenic |
| TCTCTGCCCCAAATTATGGC+GGG | 0.558401 | 7:+91960783 | MsG0780041521.01.T01:CDS |
| AACAAGTAATTTGCAGCTGG+AGG | 0.567978 | 7:-91959539 | None:intergenic |
| CCGCTGTCTGGAATTTCGGT+AGG | 0.569213 | 7:-91959869 | None:intergenic |
| TCATCAATGAGTGCAGCTAC+CGG | 0.570663 | 7:-91959773 | None:intergenic |
| GAGAAAATACTTTGTATGCA+TGG | 0.574695 | 7:+91959794 | MsG0780041521.01.T01:CDS |
| TTGGTGATTATGTAGACAGA+GGG | 0.580074 | 7:+91959564 | MsG0780041521.01.T01:CDS |
| ACTAGATCTATCCCTGTGCA+GGG | 0.580786 | 7:-91961024 | None:intergenic |
| CTCTGCCCCAAATTATGGCG+GGG | 0.582113 | 7:+91960784 | MsG0780041521.01.T01:CDS |
| GATCCTGATCCTAACGCTGA+GGG | 0.583668 | 7:+91959917 | MsG0780041521.01.T01:CDS |
| GTACTAACCGCAAATGCGGA+TGG | 0.584337 | 7:-91958621 | None:intergenic |
| GGCGGGGAATTTGACAACGC+TGG | 0.591736 | 7:+91960800 | MsG0780041521.01.T01:CDS |
| AGATTGTTAGAAGGAAAGGG+AGG | 0.602378 | 7:+91958500 | MsG0780041521.01.T01:CDS |
| TTCTCTGCCCCAAATTATGG+CGG | 0.611120 | 7:+91960782 | MsG0780041521.01.T01:CDS |
| TAGAAATTATGTTAGAAACA+TGG | 0.611184 | 7:+91961356 | MsG0780041521.01.T01:three_prime_UTR |
| TTTACGATGAATGTAAAAGG+AGG | 0.613144 | 7:+91959702 | MsG0780041521.01.T01:CDS |
| ACAAGTAATTTGCAGCTGGA+GGG | 0.614880 | 7:-91959538 | None:intergenic |
| CTTGGTGATTATGTAGACAG+AGG | 0.622438 | 7:+91959563 | MsG0780041521.01.T01:CDS |
| ATCAGATAAGAGAGGTTACG+AGG | 0.624724 | 7:+91959846 | MsG0780041521.01.T01:CDS |
| AAAAGTACTAACCGCAAATG+CGG | 0.624956 | 7:-91958625 | None:intergenic |
| TGATCCTGATCCTAACGCTG+AGG | 0.628710 | 7:+91959916 | MsG0780041521.01.T01:CDS |
| AAATTCCCCGCCATAATTTG+GGG | 0.631186 | 7:-91960789 | None:intergenic |
| GATCTTGATCTTATTTGCAG+GGG | 0.650810 | 7:+91960013 | MsG0780041521.01.T01:CDS |
| CTAGATCTATCCCTGTGCAG+GGG | 0.653548 | 7:-91961023 | None:intergenic |
| CAAAAGTACACGAAACACCT+CGG | 0.655383 | 7:-91959955 | None:intergenic |
| TGTCGAGTAGGAGTTTGACA+TGG | 0.663778 | 7:+91961101 | MsG0780041521.01.T01:three_prime_UTR |
| AAATTTAGATCAGATAAGAG+AGG | 0.664730 | 7:+91959838 | MsG0780041521.01.T01:CDS |
| GGTTGGGCAGATAGTGACCG+AGG | 0.706364 | 7:+91959938 | MsG0780041521.01.T01:CDS |
| AAAATACTTTGTATGCATGG+AGG | 0.710478 | 7:+91959797 | MsG0780041521.01.T01:CDS |
| CCTACCGAAATTCCAGACAG+CGG | 0.761713 | 7:+91959869 | MsG0780041521.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATATATTTACTAAAAGT+TGG | + | Chr7:91959195-91959214 | MsG0780041521.01.T01:intron | 10.0% |
| !! | TCAAAAAAAAAAAAAAAAGT+TGG | + | Chr7:91959230-91959249 | MsG0780041521.01.T01:intron | 10.0% |
| !!! | CTATTTTTCAAAAATATATA+CGG | + | Chr7:91958750-91958769 | MsG0780041521.01.T01:intron | 10.0% |
| !! | ATATCAACTAATTTCAAAAT+GGG | - | Chr7:91960188-91960207 | None:intergenic | 15.0% |
| !! | ATTATTCAGTTTCTATTAAA+TGG | - | Chr7:91959377-91959396 | None:intergenic | 15.0% |
| !! | TATATCAACTAATTTCAAAA+TGG | - | Chr7:91960189-91960208 | None:intergenic | 15.0% |
| !!! | ATCAAAAATGAATTTTAAGA+AGG | + | Chr7:91960904-91960923 | MsG0780041521.01.T01:CDS | 15.0% |
| !!! | GTTTTTACAATTAAGAATAT+TGG | + | Chr7:91958864-91958883 | MsG0780041521.01.T01:intron | 15.0% |
| !!! | TGCAATTTTTTTTTTCTTAT+AGG | + | Chr7:91960709-91960728 | MsG0780041521.01.T01:intron | 15.0% |
| !! | AAAATATTTAGGAATGAAAC+TGG | + | Chr7:91960262-91960281 | MsG0780041521.01.T01:intron | 20.0% |
| !! | AGATAAGAAAGTCAATATAT+TGG | - | Chr7:91960568-91960587 | None:intergenic | 20.0% |
| !! | CAAATTGCAAAATTGTATAA+TGG | + | Chr7:91961151-91961170 | MsG0780041521.01.T01:three_prime_UTR | 20.0% |
| !! | TAAAACCTATATCAAACATA+TGG | + | Chr7:91959161-91959180 | MsG0780041521.01.T01:intron | 20.0% |
| !! | TAGAAATTATGTTAGAAACA+TGG | + | Chr7:91961356-91961375 | MsG0780041521.01.T01:three_prime_UTR | 20.0% |
| !! | TTAAGAATATTGGTCATTTA+AGG | + | Chr7:91958874-91958893 | MsG0780041521.01.T01:intron | 20.0% |
| !! | TTTAATTCATGATAGATGAA+GGG | - | Chr7:91959283-91959302 | None:intergenic | 20.0% |
| !!! | AAAAGTAACTAGATGAATTT+TGG | - | Chr7:91960108-91960127 | None:intergenic | 20.0% |
| !!! | ATGAATTTTGGAAATTATGA+AGG | - | Chr7:91960096-91960115 | None:intergenic | 20.0% |
| !!! | CATAGTCTTGTATATATATT+TGG | + | Chr7:91960958-91960977 | MsG0780041521.01.T01:intron | 20.0% |
| !!! | TGATCTAAATTTTGTAATTC+AGG | - | Chr7:91959830-91959849 | None:intergenic | 20.0% |
| !!! | TTATTGAGACTTTTTGAATA+TGG | + | Chr7:91959509-91959528 | MsG0780041521.01.T01:CDS | 20.0% |
| !!! | TTTTAAAATATTGCAGATAG+AGG | - | Chr7:91959329-91959348 | None:intergenic | 20.0% |
| !!! | TTTTAATTCATGATAGATGA+AGG | - | Chr7:91959284-91959303 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCTTATAGGTTG+TGG | + | Chr7:91960715-91960734 | MsG0780041521.01.T01:intron | 20.0% |
| !!! | TTTTTTTTTTTGAGCAATAC+AGG | - | Chr7:91959223-91959242 | None:intergenic | 20.0% |
| ! | AAAATATATCACGAAAACCA+AGG | + | Chr7:91958954-91958973 | MsG0780041521.01.T01:intron | 25.0% |
| ! | AAATTTAGATCAGATAAGAG+AGG | + | Chr7:91959838-91959857 | MsG0780041521.01.T01:CDS | 25.0% |
| ! | CATCGTAAAAACCATATATT+CGG | - | Chr7:91959691-91959710 | None:intergenic | 25.0% |
| ! | TAATTTAATGACCGTGATAA+AGG | - | Chr7:91960239-91960258 | None:intergenic | 25.0% |
| ! | TAGTCATTCTACAAGTATTT+CGG | + | Chr7:91961043-91961062 | MsG0780041521.01.T01:three_prime_UTR | 25.0% |
| ! | TCAAAAATATATACGGAGTT+TGG | + | Chr7:91958757-91958776 | MsG0780041521.01.T01:intron | 25.0% |
| ! | TTCTATGACATTTATGTGAA+TGG | + | Chr7:91961329-91961348 | MsG0780041521.01.T01:three_prime_UTR | 25.0% |
| ! | TTGAGAATTGTGGTTAAATA+TGG | + | Chr7:91959070-91959089 | MsG0780041521.01.T01:intron | 25.0% |
| !! | AATTTCAACTTTGAGTTAGT+TGG | - | Chr7:91961082-91961101 | None:intergenic | 25.0% |
| !! | ATTAGTTGATATACAGTTTG+TGG | + | Chr7:91960196-91960215 | MsG0780041521.01.T01:intron | 25.0% |
| !! | GTAAATTTTGTTGAGAATTG+TGG | + | Chr7:91959060-91959079 | MsG0780041521.01.T01:intron | 25.0% |
| !! | GTTTTTACGATGAATGTAAA+AGG | + | Chr7:91959699-91959718 | MsG0780041521.01.T01:CDS | 25.0% |
| !!! | TTTCTCTCTCTTTGAAATTT+TGG | + | Chr7:91958660-91958679 | MsG0780041521.01.T01:intron | 25.0% |
| AAAATACTTTGTATGCATGG+AGG | + | Chr7:91959797-91959816 | MsG0780041521.01.T01:CDS | 30.0% | |
| AAACCTGCTGATAAAGAATT+TGG | + | Chr7:91960872-91960891 | MsG0780041521.01.T01:CDS | 30.0% | |
| AAGAAGATTGTTAGAAGGAA+AGG | + | Chr7:91958496-91958515 | MsG0780041521.01.T01:CDS | 30.0% | |
| ACAAGTATTTCGGTTCAAAT+AGG | + | Chr7:91961053-91961072 | MsG0780041521.01.T01:three_prime_UTR | 30.0% | |
| AGAAGATTGTTAGAAGGAAA+GGG | + | Chr7:91958497-91958516 | MsG0780041521.01.T01:CDS | 30.0% | |
| ATGAAACTGGAACAATTAAG+TGG | + | Chr7:91960275-91960294 | MsG0780041521.01.T01:intron | 30.0% | |
| CAAAAAGTCTCAATAAGTCT+TGG | - | Chr7:91959505-91959524 | None:intergenic | 30.0% | |
| CATCAGGAACAACAAAAAAT+AGG | - | Chr7:91959439-91959458 | None:intergenic | 30.0% | |
| CTTAAGAGATAAACTCTATC+CGG | - | Chr7:91959641-91959660 | None:intergenic | 30.0% | |
| GAGAAAATACTTTGTATGCA+TGG | + | Chr7:91959794-91959813 | MsG0780041521.01.T01:CDS | 30.0% | |
| GATAGAGTTTATCTCTTAAG+AGG | + | Chr7:91959641-91959660 | MsG0780041521.01.T01:CDS | 30.0% | |
| GCAAAGATAAACCGAATATA+TGG | + | Chr7:91959677-91959696 | MsG0780041521.01.T01:CDS | 30.0% | |
| GTGATAAGAAGATTGTTAGA+AGG | + | Chr7:91958491-91958510 | MsG0780041521.01.T01:CDS | 30.0% | |
| TCAAAGAGAGAGAAAACAAA+AGG | - | Chr7:91958655-91958674 | None:intergenic | 30.0% | |
| TCTTGCCATATGTTTGATAT+AGG | - | Chr7:91959169-91959188 | None:intergenic | 30.0% | |
| TGAAACTGGAACAATTAAGT+GGG | + | Chr7:91960276-91960295 | MsG0780041521.01.T01:intron | 30.0% | |
| TTATCATTATGCTCGTATGA+AGG | - | Chr7:91960057-91960076 | None:intergenic | 30.0% | |
| TTTACGATGAATGTAAAAGG+AGG | + | Chr7:91959702-91959721 | MsG0780041521.01.T01:CDS | 30.0% | |
| TTTGCAATTTGCAACTTGAA+AGG | - | Chr7:91961142-91961161 | None:intergenic | 30.0% | |
| ! | ATGATCTTGATCTTATTTGC+AGG | + | Chr7:91960011-91960030 | MsG0780041521.01.T01:CDS | 30.0% |
| ! | TGATCTTGATCTTATTTGCA+GGG | + | Chr7:91960012-91960031 | MsG0780041521.01.T01:CDS | 30.0% |
| ! | TTGAGACTTTTTGAATATGG+TGG | + | Chr7:91959512-91959531 | MsG0780041521.01.T01:CDS | 30.0% |
| !!! | ATCCGGATATCTTATTTTGT+AGG | - | Chr7:91959624-91959643 | None:intergenic | 30.0% |
| !!! | TTTTTTCTTATAGGTTGTGG+AGG | + | Chr7:91960718-91960737 | MsG0780041521.01.T01:intron | 30.0% |
| AAAGATTGCATGGTAACTTG+GGG | + | Chr7:91960367-91960386 | MsG0780041521.01.T01:intron | 35.0% | |
| ACATCAAATTACATGGGAAC+TGG | + | Chr7:91958993-91959012 | MsG0780041521.01.T01:intron | 35.0% | |
| ATATTCTCTGCCCCAAATTA+TGG | + | Chr7:91960779-91960798 | MsG0780041521.01.T01:CDS | 35.0% | |
| CAAAGTTGAAATTGTCGAGT+AGG | + | Chr7:91961089-91961108 | MsG0780041521.01.T01:three_prime_UTR | 35.0% | |
| CGTCGAACATCAAATTACAT+GGG | + | Chr7:91958987-91959006 | MsG0780041521.01.T01:intron | 35.0% | |
| CTTCCAAATTCTTTATCAGC+AGG | - | Chr7:91960878-91960897 | None:intergenic | 35.0% | |
| GAAAGATTGCATGGTAACTT+GGG | + | Chr7:91960366-91960385 | MsG0780041521.01.T01:intron | 35.0% | |
| GGAACAACAAAAAATAGGTG+TGG | - | Chr7:91959434-91959453 | None:intergenic | 35.0% | |
| GGCCTACAAAATAAGATATC+CGG | + | Chr7:91959619-91959638 | MsG0780041521.01.T01:CDS | 35.0% | |
| GGTTTATCTTTGCATCTTCA+TGG | - | Chr7:91959670-91959689 | None:intergenic | 35.0% | |
| GTAAAAGGAGGTTCAATGTT+AGG | + | Chr7:91959714-91959733 | MsG0780041521.01.T01:CDS | 35.0% | |
| TACCATGCAATCTTTCCTAA+CGG | - | Chr7:91960362-91960381 | None:intergenic | 35.0% | |
| TCGTCGAACATCAAATTACA+TGG | + | Chr7:91958986-91959005 | MsG0780041521.01.T01:intron | 35.0% | |
| TGACATTGCTACCATAATCA+AGG | + | Chr7:91959123-91959142 | MsG0780041521.01.T01:intron | 35.0% | |
| TGAGACCTTAATCAGAAGTT+GGG | - | Chr7:91960679-91960698 | None:intergenic | 35.0% | |
| ! | AGAAACAAGTAATTTGCAGC+TGG | - | Chr7:91959545-91959564 | None:intergenic | 35.0% |
| ! | GATCTTGATCTTATTTGCAG+GGG | + | Chr7:91960013-91960032 | MsG0780041521.01.T01:CDS | 35.0% |
| ! | GCTGCAAATTACTTGTTTCT+TGG | + | Chr7:91959545-91959564 | MsG0780041521.01.T01:CDS | 35.0% |
| ! | TTGGTGATTATGTAGACAGA+GGG | + | Chr7:91959564-91959583 | MsG0780041521.01.T01:CDS | 35.0% |
| !! | AAAAGTACTAACCGCAAATG+CGG | - | Chr7:91958628-91958647 | None:intergenic | 35.0% |
| !!! | AAGCAAGTTTTTTTCCCGTT+AGG | + | Chr7:91960344-91960363 | MsG0780041521.01.T01:intron | 35.0% |
| !!! | TGATGTTGTCGCAGATTTTT+TGG | + | Chr7:91959982-91960001 | MsG0780041521.01.T01:CDS | 35.0% |
| AAATTCCCCGCCATAATTTG+GGG | - | Chr7:91960792-91960811 | None:intergenic | 40.0% | |
| ACAATGTGAGTGATGCTAAG+AGG | - | Chr7:91960434-91960453 | None:intergenic | 40.0% | |
| ACCAGTTCATTGCTTGTGTT+TGG | + | Chr7:91961248-91961267 | MsG0780041521.01.T01:three_prime_UTR | 40.0% | |
| ACCATAATCAAGGTTGTGGA+CGG | + | Chr7:91959133-91959152 | MsG0780041521.01.T01:intron | 40.0% | |
| ACCATGCAATCTTTCCTAAC+GGG | - | Chr7:91960361-91960380 | None:intergenic | 40.0% | |
| AGATTGTTAGAAGGAAAGGG+AGG | + | Chr7:91958500-91958519 | MsG0780041521.01.T01:CDS | 40.0% | |
| AGTTTGTGGACTTCTGATAG+AGG | + | Chr7:91960210-91960229 | MsG0780041521.01.T01:intron | 40.0% | |
| ATCAGATAAGAGAGGTTACG+AGG | + | Chr7:91959846-91959865 | MsG0780041521.01.T01:CDS | 40.0% | |
| CAAATTACATGGGAACTGGA+GGG | + | Chr7:91958997-91959016 | MsG0780041521.01.T01:intron | 40.0% | |
| CAAATTCCCCGCCATAATTT+GGG | - | Chr7:91960793-91960812 | None:intergenic | 40.0% | |
| CGATTGCTTTAACTGTTTGC+CGG | + | Chr7:91959754-91959773 | MsG0780041521.01.T01:CDS | 40.0% | |
| CGGCAAACAGTTAAAGCAAT+CGG | - | Chr7:91959756-91959775 | None:intergenic | 40.0% | |
| GAATTGCATAGTGCAACTAC+AGG | - | Chr7:91959258-91959277 | None:intergenic | 40.0% | |
| GAGACCTTAATCAGAAGTTG+GGG | - | Chr7:91960678-91960697 | None:intergenic | 40.0% | |
| GATAGAGGCAACCTTTATCA+CGG | + | Chr7:91960225-91960244 | MsG0780041521.01.T01:intron | 40.0% | |
| GGAAAGATTGCATGGTAACT+TGG | + | Chr7:91960365-91960384 | MsG0780041521.01.T01:intron | 40.0% | |
| GGAAGGAGAAATGGACAAAA+CGG | + | Chr7:91958457-91958476 | MsG0780041521.01.T01:CDS | 40.0% | |
| GTGAGACCTTAATCAGAAGT+TGG | - | Chr7:91960680-91960699 | None:intergenic | 40.0% | |
| TAAGACCAAAGGAGATGTGT+CGG | + | Chr7:91959021-91959040 | MsG0780041521.01.T01:intron | 40.0% | |
| TCAAATTACATGGGAACTGG+AGG | + | Chr7:91958996-91959015 | MsG0780041521.01.T01:intron | 40.0% | |
| TCAAATTCCCCGCCATAATT+TGG | - | Chr7:91960794-91960813 | None:intergenic | 40.0% | |
| TGCTACCATAATCAAGGTTG+TGG | + | Chr7:91959129-91959148 | MsG0780041521.01.T01:intron | 40.0% | |
| TTATGCTCGTATGAAGGAAG+AGG | - | Chr7:91960051-91960070 | None:intergenic | 40.0% | |
| TTCGACGAAGAGATAAACCT+TGG | - | Chr7:91958974-91958993 | None:intergenic | 40.0% | |
| TTCTTATAGGTTGTGGAGGA+TGG | + | Chr7:91960722-91960741 | MsG0780041521.01.T01:intron | 40.0% | |
| TTTGCCCCAACTTCTGATTA+AGG | + | Chr7:91960671-91960690 | MsG0780041521.01.T01:intron | 40.0% | |
| ! | AACAAGTAATTTGCAGCTGG+AGG | - | Chr7:91959542-91959561 | None:intergenic | 40.0% |
| ! | AACTACCCATGCATCCTTTT+GGG | + | Chr7:91961199-91961218 | MsG0780041521.01.T01:three_prime_UTR | 40.0% |
| ! | ACAAGTAATTTGCAGCTGGA+GGG | - | Chr7:91959541-91959560 | None:intergenic | 40.0% |
| ! | CAAAAGTACACGAAACACCT+CGG | - | Chr7:91959958-91959977 | None:intergenic | 40.0% |
| ! | CTTGGTGATTATGTAGACAG+AGG | + | Chr7:91959563-91959582 | MsG0780041521.01.T01:CDS | 40.0% |
| ! | GGAGACTATATGCTTGCTTT+TGG | + | Chr7:91959598-91959617 | MsG0780041521.01.T01:CDS | 40.0% |
| ! | TCTCGAGTTGCAAGCAATAT+GGG | - | Chr7:91960516-91960535 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTCCTGATGTCG+TGG | + | Chr7:91959442-91959461 | MsG0780041521.01.T01:intron | 40.0% |
| AACTGGAGGGATAAGACCAA+AGG | + | Chr7:91959010-91959029 | MsG0780041521.01.T01:intron | 45.0% | |
| AATCATTGCTCCTGCCCAAA+AGG | - | Chr7:91961216-91961235 | None:intergenic | 45.0% | |
| ACCGTCCACAACCTTGATTA+TGG | - | Chr7:91959137-91959156 | None:intergenic | 45.0% | |
| ACTAGATCTATCCCTGTGCA+GGG | - | Chr7:91961027-91961046 | None:intergenic | 45.0% | |
| AGACAGAGGGAAGCAAAGTT+TGG | + | Chr7:91959577-91959596 | MsG0780041521.01.T01:CDS | 45.0% | |
| AGCAAAAGAACCACGACATC+AGG | - | Chr7:91959455-91959474 | None:intergenic | 45.0% | |
| CTGCATGCAGGTGATATTCA+TGG | + | Chr7:91959473-91959492 | MsG0780041521.01.T01:intron | 45.0% | |
| GCACGAAGATCGAGAAGAAT+AGG | - | Chr7:91958599-91958618 | None:intergenic | 45.0% | |
| GCCAAACACAAGCAATGAAC+TGG | - | Chr7:91961252-91961271 | None:intergenic | 45.0% | |
| GCTCGTGTATAATTCGACTC+TGG | - | Chr7:91960616-91960635 | None:intergenic | 45.0% | |
| GGAGGTTCAATGTTAGGCTA+TGG | + | Chr7:91959720-91959739 | MsG0780041521.01.T01:CDS | 45.0% | |
| GTGTATAATTCGACTCTGGC+TGG | - | Chr7:91960612-91960631 | None:intergenic | 45.0% | |
| TACTAACCGCAAATGCGGAT+GGG | - | Chr7:91958623-91958642 | None:intergenic | 45.0% | |
| TCATCAATGAGTGCAGCTAC+CGG | - | Chr7:91959776-91959795 | None:intergenic | 45.0% | |
| TCCCGTTAGGAAAGATTGCA+TGG | + | Chr7:91960357-91960376 | MsG0780041521.01.T01:intron | 45.0% | |
| TGTCGAGTAGGAGTTTGACA+TGG | + | Chr7:91961101-91961120 | MsG0780041521.01.T01:three_prime_UTR | 45.0% | |
| TTCTCTGCCCCAAATTATGG+CGG | + | Chr7:91960782-91960801 | MsG0780041521.01.T01:CDS | 45.0% | |
| ! | CGAGAAGAATAGGTTGAGAG+AGG | - | Chr7:91958589-91958608 | None:intergenic | 45.0% |
| ! | GAACTACCCATGCATCCTTT+TGG | + | Chr7:91961198-91961217 | MsG0780041521.01.T01:three_prime_UTR | 45.0% |
| ! | GTCTCGAGTTGCAAGCAATA+TGG | - | Chr7:91960517-91960536 | None:intergenic | 45.0% |
| ! | TAACTTGGGGCTTCGATTTG+CGG | + | Chr7:91960380-91960399 | MsG0780041521.01.T01:intron | 45.0% |
| ! | TCTTATTTGCAGGGGTCATC+AGG | + | Chr7:91960021-91960040 | MsG0780041521.01.T01:CDS | 45.0% |
| !! | CGAGGTGTTTCGTGTACTTT+TGG | + | Chr7:91959956-91959975 | MsG0780041521.01.T01:CDS | 45.0% |
| !! | TTAAATTAATGAAAATATTT+AGG | + | Chr7:91960251-91960270 | MsG0780041521.01.T01:intron | 5.0% |
| CCTACCGAAATTCCAGACAG+CGG | + | Chr7:91959869-91959888 | MsG0780041521.01.T01:CDS | 50.0% | |
| CTAGATCTATCCCTGTGCAG+GGG | - | Chr7:91961026-91961045 | None:intergenic | 50.0% | |
| GACTAGATCTATCCCTGTGC+AGG | - | Chr7:91961028-91961047 | None:intergenic | 50.0% | |
| GATCCTGATCCTAACGCTGA+GGG | + | Chr7:91959917-91959936 | MsG0780041521.01.T01:CDS | 50.0% | |
| GTACTAACCGCAAATGCGGA+TGG | - | Chr7:91958624-91958643 | None:intergenic | 50.0% | |
| GTCTCTTGTGCGATCTGCTT+TGG | + | Chr7:91959891-91959910 | MsG0780041521.01.T01:CDS | 50.0% | |
| TAGATCTATCCCTGTGCAGG+GGG | - | Chr7:91961025-91961044 | None:intergenic | 50.0% | |
| TCCTGCCCAAAAGGATGCAT+GGG | - | Chr7:91961207-91961226 | None:intergenic | 50.0% | |
| TCTCTGCCCCAAATTATGGC+GGG | + | Chr7:91960783-91960802 | MsG0780041521.01.T01:CDS | 50.0% | |
| TGATCCTAACGCTGAGGGTT+GGG | + | Chr7:91959922-91959941 | MsG0780041521.01.T01:CDS | 50.0% | |
| TGATCCTGATCCTAACGCTG+AGG | + | Chr7:91959916-91959935 | MsG0780041521.01.T01:CDS | 50.0% | |
| ! | GAGACCGCTGTCTGGAATTT+CGG | - | Chr7:91959876-91959895 | None:intergenic | 50.0% |
| ! | GTGGTTCTTTTGCTGCATGC+AGG | + | Chr7:91959461-91959480 | MsG0780041521.01.T01:intron | 50.0% |
| CAACCCTCAGCGTTAGGATC+AGG | - | Chr7:91959923-91959942 | None:intergenic | 55.0% | |
| CTCCTGCCCAAAAGGATGCA+TGG | - | Chr7:91961208-91961227 | None:intergenic | 55.0% | |
| CTCTGCCCCAAATTATGGCG+GGG | + | Chr7:91960784-91960803 | MsG0780041521.01.T01:CDS | 55.0% | |
| CTGATCCTAACGCTGAGGGT+TGG | + | Chr7:91959921-91959940 | MsG0780041521.01.T01:CDS | 55.0% | |
| GAGAGCCGACACATCTCCTT+TGG | - | Chr7:91959029-91959048 | None:intergenic | 55.0% | |
| ! | ACCCATGCATCCTTTTGGGC+AGG | + | Chr7:91961203-91961222 | MsG0780041521.01.T01:three_prime_UTR | 55.0% |
| ! | CCGCTGTCTGGAATTTCGGT+AGG | - | Chr7:91959872-91959891 | None:intergenic | 55.0% |
| CGTGCTCCCATCCGCATTTG+CGG | + | Chr7:91958614-91958633 | MsG0780041521.01.T01:CDS | 60.0% | |
| GGCGGGGAATTTGACAACGC+TGG | + | Chr7:91960800-91960819 | MsG0780041521.01.T01:CDS | 60.0% | |
| GGTTGGGCAGATAGTGACCG+AGG | + | Chr7:91959938-91959957 | MsG0780041521.01.T01:CDS | 60.0% | |
| TCGCACAAGAGACCGCTGTC+TGG | - | Chr7:91959884-91959903 | None:intergenic | 60.0% | |
| TCTGCCCAACCCTCAGCGTT+AGG | - | Chr7:91959929-91959948 | None:intergenic | 60.0% | |
| TTTCTGCAGCCCCCTGCACA+GGG | + | Chr7:91961013-91961032 | MsG0780041521.01.T01:intron | 60.0% | |
| ! | CTTGGGGCTTCGATTTGCGG+AGG | + | Chr7:91960383-91960402 | MsG0780041521.01.T01:intron | 60.0% |
| ! | TTTTCTGCAGCCCCCTGCAC+AGG | + | Chr7:91961012-91961031 | MsG0780041521.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 91958455 | 91961380 | 91958455 | ID=MsG0780041521.01;Name=MsG0780041521.01 |
| Chr7 | mRNA | 91958455 | 91961380 | 91958455 | ID=MsG0780041521.01.T01;Parent=MsG0780041521.01;Name=MsG0780041521.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.66|0.5|1|1|1|4|341|317 |
| Chr7 | exon | 91958455 | 91958635 | 91958455 | ID=MsG0780041521.01.T01:exon:4217;Parent=MsG0780041521.01.T01 |
| Chr7 | exon | 91959483 | 91960042 | 91959483 | ID=MsG0780041521.01.T01:exon:4218;Parent=MsG0780041521.01.T01 |
| Chr7 | exon | 91960731 | 91960925 | 91960731 | ID=MsG0780041521.01.T01:exon:4219;Parent=MsG0780041521.01.T01 |
| Chr7 | exon | 91961022 | 91961380 | 91961022 | ID=MsG0780041521.01.T01:exon:4220;Parent=MsG0780041521.01.T01 |
| Chr7 | CDS | 91958455 | 91958635 | 91958455 | ID=MsG0780041521.01.T01:cds;Parent=MsG0780041521.01.T01 |
| Chr7 | CDS | 91959483 | 91960042 | 91959483 | ID=MsG0780041521.01.T01:cds;Parent=MsG0780041521.01.T01 |
| Chr7 | CDS | 91960731 | 91960925 | 91960731 | ID=MsG0780041521.01.T01:cds;Parent=MsG0780041521.01.T01 |
| Chr7 | CDS | 91961022 | 91961039 | 91961022 | ID=MsG0780041521.01.T01:cds;Parent=MsG0780041521.01.T01 |
| Chr7 | three_prime_UTR | 91961040 | 91961380 | 91961040 | ID=MsG0780041521.01.T01:three_prime_utr;Parent=MsG0780041521.01.T01 |
| Gene Sequence |
| Protein sequence |
