AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029230.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029230.01.T01 MTR_5g083040 92.398 342 26 0 1 342 20 361 0.0 651
MsG0580029230.01.T01 MTR_5g074270 42.405 316 173 4 9 321 29 338 2.62e-97 293
MsG0580029230.01.T01 MTR_4g087985 42.462 325 171 5 9 324 32 349 1.67e-94 286
MsG0580029230.01.T01 MTR_2g015080 41.538 325 176 6 9 324 34 353 2.09e-94 285
MsG0580029230.01.T01 MTR_1g025780 39.319 323 189 2 11 333 39 354 8.28e-93 281
MsG0580029230.01.T01 MTR_3g114120 40.752 319 179 4 12 328 46 356 8.51e-88 268
MsG0580029230.01.T01 MTR_5g022640 40.841 333 185 6 12 340 42 366 1.46e-87 268
MsG0580029230.01.T01 MTR_1g025760 39.222 334 189 4 2 333 74 395 2.08e-87 269
MsG0580029230.01.T01 MTR_5g022630 42.154 325 169 8 11 327 41 354 4.12e-86 264
MsG0580029230.01.T01 MTR_1g025700 39.039 333 190 4 2 333 44 364 7.02e-86 264
MsG0580029230.01.T01 MTR_3g114090 39.144 327 190 4 12 336 35 354 3.51e-85 261
MsG0580029230.01.T01 MTR_1g025720 37.160 331 198 4 12 340 36 358 1.76e-83 257
MsG0580029230.01.T01 MTR_8g075230 37.349 332 199 4 11 340 34 358 2.69e-83 256
MsG0580029230.01.T01 MTR_5g084770 38.080 323 192 4 9 329 24 340 3.78e-83 256
MsG0580029230.01.T01 MTR_3g464730 37.725 334 198 4 10 340 25 351 3.67e-82 253
MsG0580029230.01.T01 MTR_5g084750 37.963 324 190 5 9 329 26 341 3.79e-81 251
MsG0580029230.01.T01 MTR_1g025680 36.145 332 203 4 11 340 32 356 1.18e-80 253
MsG0580029230.01.T01 MTR_1g025910 40.938 320 176 5 18 334 41 350 1.04e-79 248
MsG0580029230.01.T01 MTR_8g075200 37.309 327 196 4 12 336 40 359 9.44e-79 246
MsG0580029230.01.T01 MTR_8g014910 36.449 321 194 5 12 329 31 344 4.04e-77 241
MsG0580029230.01.T01 MTR_8g075220 36.446 332 197 5 12 336 39 363 1.53e-76 239
MsG0580029230.01.T01 MTR_3g082830 36.499 337 197 5 10 340 35 360 8.32e-76 238
MsG0580029230.01.T01 MTR_5g084790 36.499 337 197 5 10 340 29 354 7.58e-75 235
MsG0580029230.01.T01 MTR_2g100620 35.890 326 191 6 12 330 30 344 3.32e-73 231
MsG0580029230.01.T01 MTR_2g084585 35.258 329 188 5 11 329 28 341 1.59e-69 221
MsG0580029230.01.T01 MTR_4g056280 34.769 325 195 6 11 329 28 341 1.17e-68 219
MsG0580029230.01.T01 MTR_4g056160 35.759 316 191 6 11 321 25 333 1.20e-64 208
MsG0580029230.01.T01 MTR_7g116570 33.636 330 202 6 5 328 26 344 6.34e-60 197
MsG0580029230.01.T01 MTR_7g116510 30.631 333 219 5 7 335 19 343 6.44e-55 184
MsG0580029230.01.T01 MTR_1g069175 32.099 324 201 5 13 328 33 345 1.04e-54 183
MsG0580029230.01.T01 MTR_1g079540 31.250 320 207 5 13 328 31 341 2.16e-54 182
MsG0580029230.01.T01 MTR_2g033930 34.494 316 193 7 9 320 28 333 1.85e-53 180
MsG0580029230.01.T01 MTR_7g116520 30.275 327 215 5 13 335 34 351 6.17e-53 179
MsG0580029230.01.T01 MTR_8g087890 32.407 324 203 8 10 328 28 340 1.12e-52 178
MsG0580029230.01.T01 MTR_3g052480 33.233 331 197 9 10 329 30 347 1.43e-52 177
MsG0580029230.01.T01 MTR_3g052490 32.551 341 185 10 10 329 29 345 2.55e-52 177
MsG0580029230.01.T01 MTR_5g009100 30.744 309 203 5 15 320 48 348 7.50e-51 174
MsG0580029230.01.T01 MTR_3g024510 31.098 328 200 9 10 327 35 346 1.07e-50 173
MsG0580029230.01.T01 MTR_5g093090 31.420 331 200 8 11 329 26 341 1.85e-50 172
MsG0580029230.01.T01 MTR_0565s0010 31.193 327 202 9 10 327 29 341 2.56e-50 172
MsG0580029230.01.T01 MTR_7g116500 28.485 330 223 5 3 328 23 343 2.85e-50 172
MsG0580029230.01.T01 MTR_6g021530 30.312 320 209 6 15 329 31 341 3.24e-50 171
MsG0580029230.01.T01 MTR_7g008060 30.341 323 199 6 10 328 30 330 1.15e-49 170
MsG0580029230.01.T01 MTR_1g079530 30.723 332 211 6 1 328 17 333 1.68e-49 169
MsG0580029230.01.T01 MTR_8g022810 31.214 346 211 11 8 339 36 368 2.94e-49 169
MsG0580029230.01.T01 MTR_3g098270 31.902 326 208 6 13 332 34 351 2.44e-48 167
MsG0580029230.01.T01 MTR_3g005660 32.198 323 195 8 10 321 33 342 1.16e-47 165
MsG0580029230.01.T01 MTR_3g435540 32.288 319 191 9 15 323 25 328 1.22e-47 165
MsG0580029230.01.T01 MTR_3g052580 31.548 336 194 11 10 329 25 340 1.27e-47 165
MsG0580029230.01.T01 MTR_3g052580 31.548 336 194 11 10 329 24 339 1.33e-47 166
MsG0580029230.01.T01 MTR_4g019880 28.659 328 221 5 13 335 32 351 1.34e-47 165
MsG0580029230.01.T01 MTR_1g024890 29.814 322 213 5 11 328 30 342 1.85e-47 164
MsG0580029230.01.T01 MTR_2g044100 33.229 319 192 10 13 322 43 349 3.54e-46 162
MsG0580029230.01.T01 MTR_4g035353 30.650 323 211 6 10 328 28 341 4.58e-46 160
MsG0580029230.01.T01 MTR_8g079050 30.435 322 208 7 9 321 33 347 4.67e-46 161
MsG0580029230.01.T01 MTR_4g122200 32.817 323 199 10 12 327 34 345 1.23e-45 159
MsG0580029230.01.T01 MTR_4g108690 29.688 320 210 7 15 329 29 338 1.95e-45 159
MsG0580029230.01.T01 MTR_3g005650 31.056 322 202 9 5 321 22 328 5.01e-45 157
MsG0580029230.01.T01 MTR_8g074570 30.435 322 203 8 11 323 36 345 8.83e-45 157
MsG0580029230.01.T01 MTR_2g033920 30.189 318 204 9 10 320 32 338 6.82e-44 155
MsG0580029230.01.T01 MTR_8g031430 29.412 323 203 10 13 327 37 342 9.52e-44 154
MsG0580029230.01.T01 MTR_5g078210 31.307 329 207 10 6 328 18 333 3.48e-42 150
MsG0580029230.01.T01 MTR_2g017925 30.189 318 196 9 9 321 29 325 5.29e-42 150
MsG0580029230.01.T01 MTR_8g031400 28.261 322 208 9 13 327 37 342 5.34e-42 150
MsG0580029230.01.T01 MTR_2g017875 31.034 319 196 10 8 320 29 329 8.18e-42 149
MsG0580029230.01.T01 MTR_8g031420 28.483 323 206 10 13 327 35 340 2.08e-41 148
MsG0580029230.01.T01 MTR_8g022790 29.375 320 199 10 10 322 34 333 1.65e-40 145
MsG0580029230.01.T01 MTR_3g023220 29.338 317 196 10 10 321 30 323 3.60e-40 145
MsG0580029230.01.T01 MTR_8g074560 30.960 323 201 10 10 321 28 339 3.05e-39 142
MsG0580029230.01.T01 MTR_2g017965 29.787 329 205 12 9 330 29 338 4.64e-39 142
MsG0580029230.01.T01 MTR_8g031390 27.864 323 207 10 13 327 37 341 9.10e-39 142
MsG0580029230.01.T01 MTR_2g017955 29.022 317 203 8 10 321 30 329 1.04e-38 141
MsG0580029230.01.T01 MTR_8g087870 28.481 316 202 9 10 321 26 321 3.33e-38 139
MsG0580029230.01.T01 MTR_0009s0250 30.915 317 193 10 10 321 30 325 8.69e-38 138
MsG0580029230.01.T01 MTR_2g017915 29.595 321 183 10 9 324 29 311 2.12e-37 137
MsG0580029230.01.T01 MTR_5g093090 31.673 281 165 8 11 279 26 291 1.51e-36 134
MsG0580029230.01.T01 MTR_3g021460 27.545 334 215 10 1 329 19 330 3.66e-36 134
MsG0580029230.01.T01 MTR_2g461580 25.826 333 222 7 1 329 19 330 4.09e-35 131
MsG0580029230.01.T01 MTR_8g074580 29.167 288 188 4 11 292 42 319 6.00e-35 132
MsG0580029230.01.T01 MTR_5g074210 37.956 137 79 2 185 321 64 194 5.17e-34 125
MsG0580029230.01.T01 MTR_8g022810 35.545 211 126 7 8 214 36 240 1.52e-33 126
MsG0580029230.01.T01 MTR_8g031390 28.214 280 182 8 13 290 37 299 4.50e-33 125
MsG0580029230.01.T01 MTR_3g463960 27.381 336 212 11 13 328 44 367 2.13e-32 125
MsG0580029230.01.T01 MTR_3g463950 27.381 336 212 11 13 328 44 367 2.13e-32 125
MsG0580029230.01.T01 MTR_3g463970 27.381 336 212 11 13 328 44 367 2.13e-32 125
MsG0580029230.01.T01 MTR_3g463940 27.381 336 212 11 13 328 44 367 2.13e-32 125
MsG0580029230.01.T01 MTR_3g463930 27.326 344 207 11 13 327 44 373 1.34e-31 122
MsG0580029230.01.T01 MTR_2g033920 29.348 276 176 9 10 278 32 295 1.61e-31 120
MsG0580029230.01.T01 MTR_1108s0010 29.358 218 130 5 116 329 3 200 1.73e-31 118
MsG0580029230.01.T01 MTR_4g036375 36.471 170 105 1 11 180 28 194 1.30e-30 115
MsG0580029230.01.T01 MTR_1g079590 35.754 179 110 3 11 185 29 206 1.72e-30 115
MsG0580029230.01.T01 MTR_7g111780 28.280 343 209 13 9 338 32 350 3.21e-30 118
MsG0580029230.01.T01 MTR_5g078210 31.900 279 172 9 6 278 18 284 3.39e-30 117
MsG0580029230.01.T01 MTR_2g015580 27.108 332 219 12 13 329 47 370 6.06e-30 118
MsG0580029230.01.T01 MTR_1g030275 27.434 339 208 12 12 327 38 361 6.21e-30 118
MsG0580029230.01.T01 MTR_7g087190 27.893 337 203 13 12 321 42 365 8.40e-30 117
MsG0580029230.01.T01 MTR_7g104220 28.440 327 196 17 14 329 43 342 2.21e-28 113
MsG0580029230.01.T01 MTR_8g089805 27.164 335 207 13 12 321 39 361 7.16e-28 112
MsG0580029230.01.T01 MTR_4g104240 26.567 335 218 10 14 333 40 361 7.19e-28 112
MsG0580029230.01.T01 MTR_2g015630 27.439 328 215 12 18 329 36 356 9.87e-28 112
MsG0580029230.01.T01 MTR_1g030268 27.273 341 210 12 12 329 39 364 5.06e-27 110
MsG0580029230.01.T01 MTR_3g069780 27.027 333 208 13 13 325 30 347 1.06e-26 108
MsG0580029230.01.T01 MTR_1g030230 27.042 355 215 12 2 329 21 358 1.83e-26 108
MsG0580029230.01.T01 MTR_1g060490 25.455 330 207 12 11 329 35 336 1.86e-26 107
MsG0580029230.01.T01 MTR_8g028160 26.549 339 215 14 13 328 36 363 2.78e-26 108
MsG0580029230.01.T01 MTR_7g116870 27.108 332 204 12 13 321 33 349 3.83e-26 107
MsG0580029230.01.T01 MTR_2g043980 27.077 325 202 14 13 324 34 336 1.94e-25 105
MsG0580029230.01.T01 MTR_2g079090 25.994 327 213 12 13 328 30 338 2.30e-25 105
MsG0580029230.01.T01 MTR_7g033155 26.257 358 208 12 13 329 38 380 2.63e-25 105
MsG0580029230.01.T01 MTR_7g033150 26.724 348 208 13 13 329 35 366 2.90e-25 105
MsG0580029230.01.T01 MTR_1g060500 25.373 335 209 11 11 329 38 347 3.20e-25 104
MsG0580029230.01.T01 MTR_1g092750 27.515 338 198 13 14 336 41 346 3.69e-25 104
MsG0580029230.01.T01 MTR_2g079080 25.836 329 209 13 13 327 30 337 3.83e-25 104
MsG0580029230.01.T01 MTR_3g438030 26.225 347 220 14 13 339 30 360 8.55e-25 103
MsG0580029230.01.T01 MTR_7g113860 26.567 335 207 12 12 321 28 348 1.70e-24 103
MsG0580029230.01.T01 MTR_0029s0050 26.061 330 209 13 13 328 30 338 2.34e-24 102
MsG0580029230.01.T01 MTR_1g030340 27.907 344 191 14 12 321 41 361 2.56e-24 102
MsG0580029230.01.T01 MTR_0029s0100 26.061 330 209 13 13 328 30 338 4.29e-24 101
MsG0580029230.01.T01 MTR_1g082390 27.405 343 193 14 12 321 30 349 4.69e-24 101
MsG0580029230.01.T01 MTR_1g092760 27.083 336 201 12 14 336 40 344 8.70e-24 100
MsG0580029230.01.T01 MTR_2g018015 30.846 201 132 5 9 204 32 230 9.49e-24 99.8
MsG0580029230.01.T01 MTR_2g015590 26.100 341 220 13 13 333 31 359 9.75e-24 100
MsG0580029230.01.T01 MTR_7g113860 26.453 344 211 14 4 321 27 354 7.47e-23 98.6
MsG0580029230.01.T01 MTR_1g092690 24.398 332 207 13 7 324 43 344 1.16e-22 97.8
MsG0580029230.01.T01 MTR_1g030220 26.453 344 209 14 13 329 40 366 2.03e-22 97.4
MsG0580029230.01.T01 MTR_3g448360 26.807 332 209 12 13 324 29 346 2.99e-22 96.7
MsG0580029230.01.T01 MTR_5g087690 24.224 322 227 9 13 331 50 357 3.14e-22 96.7
MsG0580029230.01.T01 MTR_7g033165 26.444 329 209 11 12 318 32 349 4.41e-22 96.3
MsG0580029230.01.T01 MTR_2g015650 25.501 349 220 15 1 324 16 349 8.46e-22 95.5
MsG0580029230.01.T01 MTR_6g007100 26.462 325 207 11 12 323 32 337 1.38e-21 94.7
MsG0580029230.01.T01 MTR_7g111780 26.894 264 167 9 88 338 1 251 1.40e-21 92.8
MsG0580029230.01.T01 MTR_6g007090 26.866 335 200 10 12 321 38 352 1.71e-21 94.7
MsG0580029230.01.T01 MTR_8g038680 25.788 349 220 11 12 338 27 358 3.41e-21 93.6
MsG0580029230.01.T01 MTR_5g093090 32.240 183 107 6 11 181 26 203 6.66e-21 89.7
MsG0580029230.01.T01 MTR_3g069520 26.048 334 206 14 13 324 30 344 1.71e-20 91.7
MsG0580029230.01.T01 MTR_1g030268 27.758 281 179 9 12 281 39 306 5.41e-20 89.7
MsG0580029230.01.T01 MTR_4g056220 41.489 94 53 2 237 329 86 178 6.76e-20 86.7
MsG0580029230.01.T01 MTR_6g049220 42.697 89 51 0 11 99 28 116 1.10e-19 85.5
MsG0580029230.01.T01 MTR_0127s0040 27.311 238 149 8 108 335 1 224 1.19e-19 87.0
MsG0580029230.01.T01 MTR_6g007095 25.076 331 215 11 12 323 40 356 2.36e-19 89.7
MsG0580029230.01.T01 MTR_6g034400 36.364 121 76 1 66 185 4 124 4.22e-19 82.8
MsG0580029230.01.T01 MTR_6g049230 32.812 128 78 3 187 313 74 194 2.56e-18 82.4
MsG0580029230.01.T01 MTR_4g036385 36.082 97 60 2 226 321 22 117 3.91e-18 80.1
MsG0580029230.01.T01 MTR_1g092740 24.159 327 205 12 14 327 39 335 5.75e-18 84.0
MsG0580029230.01.T01 MTR_8g089805 24.176 273 175 10 74 321 28 293 2.52e-17 82.0
MsG0580029230.01.T01 MTR_1g030265 27.805 205 130 6 137 329 133 331 2.88e-16 79.3
MsG0580029230.01.T01 MTR_7g113860 25.818 275 167 10 73 321 17 280 5.13e-16 78.2
MsG0580029230.01.T01 MTR_2g087292 35.115 131 84 1 12 142 32 161 1.70e-15 76.3
MsG0580029230.01.T01 MTR_2g017925 26.389 216 137 6 110 321 25 222 1.34e-14 73.2
MsG0580029230.01.T01 MTR_2g015590 24.549 277 190 9 13 278 31 299 4.98e-14 72.4
MsG0580029230.01.T01 MTR_5g084880 29.167 120 78 2 160 279 1 113 1.94e-12 64.7
MsG0580029230.01.T01 MTR_5g093550 52.174 46 22 0 276 321 77 122 3.39e-12 63.9
MsG0580029230.01.T01 MTR_8g062580 32.456 114 73 4 211 322 60 171 3.58e-12 65.9
MsG0580029230.01.T01 MTR_5g062890 54.717 53 23 1 12 63 27 79 1.07e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029230.01.T01 AT2G40250 49.221 321 162 1 13 333 36 355 6.11e-116 340
MsG0580029230.01.T01 AT1G06990 45.741 317 166 3 12 327 36 347 1.31e-96 291
MsG0580029230.01.T01 AT2G24560 43.582 335 175 7 12 341 33 358 1.24e-94 286
MsG0580029230.01.T01 AT2G31540 42.056 321 177 4 12 329 34 348 2.34e-94 285
MsG0580029230.01.T01 AT1G58430 42.814 334 181 6 12 342 34 360 4.95e-94 284
MsG0580029230.01.T01 AT2G30310 41.745 321 178 5 12 329 33 347 3.63e-91 277
MsG0580029230.01.T01 AT1G75900 40.439 319 182 3 12 329 42 353 4.67e-91 277
MsG0580029230.01.T01 AT2G30220 40.810 321 181 4 12 329 32 346 4.75e-90 274
MsG0580029230.01.T01 AT1G20120 38.623 334 190 5 2 327 61 387 1.15e-87 269
MsG0580029230.01.T01 AT5G45960 39.432 317 181 5 13 324 47 357 1.11e-85 263
MsG0580029230.01.T01 AT1G75880 39.375 320 185 5 11 328 50 362 4.69e-85 262
MsG0580029230.01.T01 AT5G42170 37.304 319 190 5 12 329 49 358 9.81e-85 261
MsG0580029230.01.T01 AT1G20132 37.838 333 188 5 11 336 59 379 4.95e-84 259
MsG0580029230.01.T01 AT1G75880 39.252 321 185 6 11 328 50 363 2.91e-83 257
MsG0580029230.01.T01 AT1G75890 40.625 320 180 6 11 327 45 357 3.59e-82 254
MsG0580029230.01.T01 AT1G75890 40.625 320 180 6 11 327 74 386 8.06e-82 254
MsG0580029230.01.T01 AT4G26790 37.117 326 196 4 10 333 26 344 2.22e-80 249
MsG0580029230.01.T01 AT4G26790 37.117 326 196 4 10 333 26 344 2.22e-80 249
MsG0580029230.01.T01 AT1G75890 39.339 333 179 7 11 327 45 370 4.04e-79 247
MsG0580029230.01.T01 AT1G59406 36.050 319 194 5 12 329 29 338 1.61e-77 241
MsG0580029230.01.T01 AT1G59030 36.050 319 194 5 12 329 29 338 1.61e-77 241
MsG0580029230.01.T01 AT1G58725 36.050 319 194 5 12 329 29 338 1.61e-77 241
MsG0580029230.01.T01 AT2G04570 35.484 341 210 5 3 340 17 350 5.87e-77 240
MsG0580029230.01.T01 AT2G24560 43.056 288 151 6 12 294 33 312 1.13e-76 238
MsG0580029230.01.T01 AT3G16370 37.500 328 179 6 12 328 29 341 1.46e-76 239
MsG0580029230.01.T01 AT1G20130 37.349 332 185 6 9 327 179 500 1.51e-76 244
MsG0580029230.01.T01 AT1G20130 37.838 333 182 7 9 327 199 520 2.36e-76 244
MsG0580029230.01.T01 AT5G03810 38.272 324 184 5 12 329 29 342 1.08e-73 232
MsG0580029230.01.T01 AT2G42990 37.500 320 191 4 5 322 20 332 1.76e-73 231
MsG0580029230.01.T01 AT5G63170 37.539 317 173 7 12 324 27 322 3.69e-71 225
MsG0580029230.01.T01 AT1G58520 34.483 319 192 6 12 329 29 331 3.76e-71 225
MsG0580029230.01.T01 AT1G58525 34.483 319 192 6 12 329 29 331 3.76e-71 225
MsG0580029230.01.T01 AT5G45950 36.556 331 195 7 13 341 40 357 4.34e-71 225
MsG0580029230.01.T01 AT3G43570 33.229 319 174 5 12 329 29 309 2.49e-70 222
MsG0580029230.01.T01 AT3G14820 35.110 319 196 5 12 329 31 339 1.02e-69 221
MsG0580029230.01.T01 AT5G03820 36.111 324 192 5 12 329 32 346 2.13e-67 216
MsG0580029230.01.T01 AT5G22810 34.441 331 205 6 11 336 32 355 3.39e-67 215
MsG0580029230.01.T01 AT5G03820 36.111 324 192 5 12 329 60 374 8.56e-67 215
MsG0580029230.01.T01 AT1G20135 35.220 318 185 5 13 328 29 327 1.29e-65 210
MsG0580029230.01.T01 AT3G53100 33.754 317 193 5 11 321 27 332 2.46e-64 207
MsG0580029230.01.T01 AT1G23500 37.460 315 174 7 13 324 35 329 3.94e-63 204
MsG0580029230.01.T01 AT1G73610 36.478 318 180 6 13 328 35 332 6.62e-63 204
MsG0580029230.01.T01 AT1G75920 34.675 323 184 8 12 327 28 330 6.20e-62 201
MsG0580029230.01.T01 AT5G08460 32.911 316 199 5 12 321 48 356 2.97e-59 196
MsG0580029230.01.T01 AT3G43550 34.831 267 165 4 12 278 29 286 1.12e-58 191
MsG0580029230.01.T01 AT1G75920 33.136 338 184 9 12 327 23 340 6.80e-58 191
MsG0580029230.01.T01 AT1G75910 33.129 326 198 5 12 333 27 336 5.84e-57 188
MsG0580029230.01.T01 AT1G75930 36.991 319 180 8 13 327 29 330 1.25e-56 187
MsG0580029230.01.T01 AT2G31550 39.437 213 121 3 119 329 1 207 5.93e-56 182
MsG0580029230.01.T01 AT4G28780 30.960 323 212 5 9 328 27 341 1.60e-55 185
MsG0580029230.01.T01 AT4G10950 31.003 329 202 8 11 329 69 382 1.44e-53 181
MsG0580029230.01.T01 AT3G50400 33.333 324 193 8 13 323 34 347 1.79e-53 180
MsG0580029230.01.T01 AT3G04290 29.630 324 215 5 10 329 26 340 4.62e-53 179
MsG0580029230.01.T01 AT5G15720 32.738 336 210 9 11 339 28 354 6.74e-52 176
MsG0580029230.01.T01 AT1G29670 31.776 321 194 9 10 321 29 333 6.11e-51 173
MsG0580029230.01.T01 AT5G41890 33.540 322 191 8 15 321 33 346 1.05e-50 173
MsG0580029230.01.T01 AT1G75920 32.667 300 175 8 37 329 25 304 1.81e-50 171
MsG0580029230.01.T01 AT4G10950 30.395 329 200 8 11 329 69 378 2.10e-50 173
MsG0580029230.01.T01 AT1G33811 31.563 339 214 10 10 339 31 360 2.86e-50 172
MsG0580029230.01.T01 AT1G29670 31.776 321 194 9 10 321 97 401 3.61e-50 173
MsG0580029230.01.T01 AT2G23540 32.919 322 192 9 13 321 48 358 7.87e-50 171
MsG0580029230.01.T01 AT5G33370 29.688 320 212 5 13 328 30 340 1.21e-49 170
MsG0580029230.01.T01 AT1G53920 31.402 328 206 9 9 329 44 359 1.88e-49 170
MsG0580029230.01.T01 AT1G29660 29.747 316 206 7 10 320 29 333 2.32e-49 169
MsG0580029230.01.T01 AT1G71691 33.230 322 198 8 11 328 53 361 5.89e-47 163
MsG0580029230.01.T01 AT4G18970 31.003 329 210 8 11 333 26 343 7.23e-47 162
MsG0580029230.01.T01 AT1G74460 29.063 320 212 7 15 329 25 334 1.53e-46 162
MsG0580029230.01.T01 AT5G18430 27.812 320 220 4 13 328 28 340 2.10e-46 161
MsG0580029230.01.T01 AT4G18970 31.003 329 210 8 11 333 26 343 2.92e-46 162
MsG0580029230.01.T01 AT1G75920 30.341 323 167 9 12 327 28 299 1.19e-45 158
MsG0580029230.01.T01 AT5G55050 29.448 326 214 6 12 329 38 355 2.63e-45 159
MsG0580029230.01.T01 AT5G45670 30.124 322 210 7 11 327 27 338 4.71e-45 158
MsG0580029230.01.T01 AT1G71250 31.481 324 207 8 10 328 38 351 4.12e-44 155
MsG0580029230.01.T01 AT1G71120 32.110 327 192 10 11 327 29 335 3.26e-43 153
MsG0580029230.01.T01 AT2G19060 28.783 337 207 12 11 338 28 340 2.18e-41 148
MsG0580029230.01.T01 AT5G37690 29.063 320 210 8 15 329 29 336 4.52e-41 147
MsG0580029230.01.T01 AT2G03980 29.154 319 201 11 12 321 42 344 4.63e-38 139
MsG0580029230.01.T01 AT2G03980 29.154 319 201 11 12 321 42 344 4.63e-38 139
MsG0580029230.01.T01 AT2G03980 29.154 319 201 11 12 321 42 344 4.63e-38 139
MsG0580029230.01.T01 AT2G03980 29.154 319 201 11 12 321 42 344 4.63e-38 139
MsG0580029230.01.T01 AT5G40990 29.412 323 203 10 13 323 37 346 6.54e-38 139
MsG0580029230.01.T01 AT3G14225 27.103 321 215 8 13 324 37 347 1.10e-37 139
MsG0580029230.01.T01 AT1G53940 29.283 321 208 8 13 324 39 349 2.36e-37 138
MsG0580029230.01.T01 AT3G14225 27.301 326 212 9 13 324 37 351 3.25e-37 137
MsG0580029230.01.T01 AT5G15720 31.752 274 172 8 11 278 28 292 1.00e-36 134
MsG0580029230.01.T01 AT5G37690 28.125 320 205 9 15 329 29 328 1.21e-36 135
MsG0580029230.01.T01 AT5G33370 30.000 270 176 5 13 278 30 290 1.96e-36 134
MsG0580029230.01.T01 AT1G53990 28.783 337 182 13 13 324 35 338 6.43e-35 131
MsG0580029230.01.T01 AT2G19010 27.410 332 217 10 10 338 27 337 7.07e-34 128
MsG0580029230.01.T01 AT2G19010 27.410 332 217 10 10 338 57 367 1.28e-33 128
MsG0580029230.01.T01 AT2G19050 25.298 336 220 11 10 338 28 339 1.77e-33 127
MsG0580029230.01.T01 AT4G16230 33.333 207 131 3 6 207 23 227 4.78e-33 123
MsG0580029230.01.T01 AT1G71691 32.721 272 166 8 11 278 53 311 1.79e-32 123
MsG0580029230.01.T01 AT3G48460 27.635 351 225 13 1 336 29 365 2.70e-32 124
MsG0580029230.01.T01 AT4G30140 26.426 333 218 9 10 338 30 339 9.36e-32 122
MsG0580029230.01.T01 AT5G15720 28.832 274 182 7 73 339 56 323 2.68e-30 118
MsG0580029230.01.T01 AT1G28580 28.657 335 209 16 13 328 37 360 3.30e-30 119
MsG0580029230.01.T01 AT5G03610 26.935 323 199 12 14 324 44 341 4.71e-30 118
MsG0580029230.01.T01 AT1G31550 27.844 334 214 13 13 329 36 359 1.76e-29 117
MsG0580029230.01.T01 AT1G54020 29.154 319 189 13 13 323 33 322 2.40e-29 116
MsG0580029230.01.T01 AT1G28610 26.901 342 215 15 13 333 31 358 2.98e-29 116
MsG0580029230.01.T01 AT1G28570 27.515 338 219 14 13 333 34 362 5.54e-29 115
MsG0580029230.01.T01 AT1G53940 29.779 272 172 8 13 278 39 297 1.30e-28 113
MsG0580029230.01.T01 AT5G03600 26.706 337 210 10 3 329 4 313 1.54e-28 113
MsG0580029230.01.T01 AT1G71691 29.368 269 174 7 64 328 4 260 1.56e-28 112
MsG0580029230.01.T01 AT5G03600 26.970 330 204 10 10 329 46 348 2.84e-28 113
MsG0580029230.01.T01 AT2G04020 31.416 226 134 8 12 224 42 259 2.04e-27 108
MsG0580029230.01.T01 AT1G54010 27.879 330 200 11 6 323 27 330 3.16e-27 110
MsG0580029230.01.T01 AT2G27360 27.628 333 208 13 13 324 33 353 8.95e-27 109
MsG0580029230.01.T01 AT2G04020 32.500 200 125 6 12 207 42 235 9.58e-27 108
MsG0580029230.01.T01 AT1G09390 28.221 326 213 11 12 328 36 349 1.05e-26 108
MsG0580029230.01.T01 AT5G14450 28.829 333 202 14 12 321 40 360 1.47e-26 108
MsG0580029230.01.T01 AT1G56670 26.100 341 221 11 2 328 29 352 3.08e-26 107
MsG0580029230.01.T01 AT2G19050 25.769 260 172 8 10 265 28 270 7.01e-26 105
MsG0580029230.01.T01 AT3G09930 25.617 324 203 13 14 324 40 338 1.14e-25 105
MsG0580029230.01.T01 AT3G09930 25.617 324 203 13 14 324 40 338 1.14e-25 105
MsG0580029230.01.T01 AT1G31550 26.727 333 216 13 13 329 36 356 1.62e-25 106
MsG0580029230.01.T01 AT3G05180 25.882 340 209 11 9 321 32 355 8.86e-25 103
MsG0580029230.01.T01 AT1G54790 26.453 344 218 14 1 321 20 351 1.14e-24 103
MsG0580029230.01.T01 AT3G26430 26.946 334 209 12 12 321 30 352 1.58e-24 103
MsG0580029230.01.T01 AT1G28600 26.331 338 214 14 13 329 31 354 2.14e-24 102
MsG0580029230.01.T01 AT1G28590 26.989 352 220 17 3 332 26 362 2.23e-24 103
MsG0580029230.01.T01 AT1G54000 26.791 321 199 12 13 323 36 330 6.01e-24 101
MsG0580029230.01.T01 AT1G54030 25.697 323 202 12 6 323 47 336 1.59e-23 100
MsG0580029230.01.T01 AT1G67830 26.269 335 210 13 12 321 29 351 1.78e-23 100
MsG0580029230.01.T01 AT1G28640 23.410 346 239 13 10 338 32 368 1.89e-23 100
MsG0580029230.01.T01 AT1G28650 24.269 342 221 12 10 328 34 360 3.68e-23 99.4
MsG0580029230.01.T01 AT3G14210 27.381 336 192 16 13 329 36 338 5.20e-23 99.0
MsG0580029230.01.T01 AT3G14220 26.183 317 206 12 12 322 31 325 5.28e-23 98.6
MsG0580029230.01.T01 AT4G01130 25.301 332 214 10 13 321 34 354 5.99e-23 99.0
MsG0580029230.01.T01 AT1G28660 25.513 341 214 12 13 329 35 359 1.14e-22 97.8
MsG0580029230.01.T01 AT5G45910 26.513 347 219 15 10 332 27 361 3.43e-22 96.7
MsG0580029230.01.T01 AT3G62280 28.274 336 212 13 9 332 32 350 5.66e-22 95.9
MsG0580029230.01.T01 AT1G28660 25.513 341 213 13 13 329 35 358 1.72e-21 94.7
MsG0580029230.01.T01 AT1G28670 24.398 332 226 12 13 327 35 358 4.66e-20 90.5
MsG0580029230.01.T01 AT2G36325 25.076 331 201 12 10 324 44 343 6.35e-20 89.7
MsG0580029230.01.T01 AT1G56670 27.273 286 182 9 2 278 29 297 1.15e-18 85.5
MsG0580029230.01.T01 AT1G28580 26.241 282 182 14 63 328 8 279 4.30e-18 84.0
MsG0580029230.01.T01 AT1G54020 29.278 263 152 12 68 323 1 236 8.66e-18 82.8
MsG0580029230.01.T01 AT1G54020 29.278 263 152 12 68 323 1 236 8.66e-18 82.8
MsG0580029230.01.T01 AT1G54020 29.278 263 152 12 68 323 1 236 8.66e-18 82.8
MsG0580029230.01.T01 AT4G16220 30.233 172 76 3 6 142 23 185 4.53e-16 77.0
MsG0580029230.01.T01 AT4G01130 26.316 190 117 5 155 323 83 270 1.80e-15 76.3
MsG0580029230.01.T01 AT1G28570 25.822 213 148 7 128 333 81 290 2.57e-15 76.3
MsG0580029230.01.T01 AT1G54020 29.000 200 123 8 130 323 1 187 2.65e-15 74.7
MsG0580029230.01.T01 AT1G54790 25.000 368 214 19 3 321 22 376 1.06e-14 75.1
MsG0580029230.01.T01 AT4G01130 25.362 276 185 8 13 278 34 298 1.65e-14 73.9
MsG0580029230.01.T01 AT1G28570 25.743 202 140 7 139 333 1 199 5.32e-14 70.9
MsG0580029230.01.T01 AT5G03980 26.396 197 136 5 136 327 114 306 3.19e-13 70.1
MsG0580029230.01.T01 AT4G16233 32.990 97 63 2 226 321 6 101 4.38e-12 63.2
MsG0580029230.01.T01 AT1G54030 23.985 271 170 10 6 271 47 286 8.18e-12 65.9

Find 101 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACAAAATTCTGAAGATTT+TGG 0.137422 5:-94014468 None:intergenic
TTAATAATAATTACCGTATT+TGG 0.153561 5:-94015378 None:intergenic
CTTAGCTAAGGTCTTGGATT+TGG 0.218569 5:+94014255 MsG0580029230.01.T01:CDS
TAGCCAAAAGCTAGGAATTA+AGG 0.243178 5:+94014129 MsG0580029230.01.T01:CDS
AATCCTTAATTCCTAGCTTT+TGG 0.252890 5:-94014132 None:intergenic
TAATCGCAAAGAACGCATTT+TGG 0.271306 5:-94014357 None:intergenic
TTTGCAATAAATTATGAATA+AGG 0.281078 5:-94015283 None:intergenic
ATGAATAAGGGATTGAAGTT+TGG 0.289969 5:-94015270 None:intergenic
TTAGCTAAGGTCTTGGATTT+GGG 0.291860 5:+94014256 MsG0580029230.01.T01:CDS
ATCCATCCAAGTATCTGTTT+TGG 0.305265 5:+94015764 MsG0580029230.01.T01:CDS
TGAATCTACCGGTTGGGATT+TGG 0.311553 5:-94014078 None:intergenic
GTCTATGTGGTTGTTGTTGC+CGG 0.316265 5:-94014008 None:intergenic
TTGCAATAAATTATGAATAA+GGG 0.316347 5:-94015282 None:intergenic
ACCGATAATGATTTGTTAAC+CGG 0.318424 5:+94014184 MsG0580029230.01.T01:CDS
ATTAATTTCCAGAGAATGTA+TGG 0.323852 5:+94015098 MsG0580029230.01.T01:intron
TTGTTAACCGGGGTTAGTTT+TGG 0.337441 5:+94014196 MsG0580029230.01.T01:CDS
TACCGTATTTGGTTGGGTAT+TGG 0.342544 5:-94015367 None:intergenic
CTACCGGTTGGGATTTGGTT+TGG 0.343428 5:-94014073 None:intergenic
TTGAAGGCAATGGCTGAGTT+TGG 0.349295 5:-94013941 None:intergenic
CGTGAAGGATGCTGTGGAAC+AGG 0.354474 5:+94015691 MsG0580029230.01.T01:CDS
AAACACGTTGGAGCCAGTTT+TGG 0.367374 5:-94015208 None:intergenic
CTATACACCCATTCTTGATA+TGG 0.385458 5:+94015343 MsG0580029230.01.T01:CDS
AATAATTACCGTATTTGGTT+GGG 0.385671 5:-94015373 None:intergenic
CCCGGTTAACAAATCATTAT+CGG 0.388677 5:-94014185 None:intergenic
GTTGTTGTTGCCGGCATCAA+TGG 0.402175 5:-94013999 None:intergenic
GCATCTCACCTAGCCAAAAC+TGG 0.406343 5:+94015195 MsG0580029230.01.T01:CDS
AACAGATACTTGGATGGATC+AGG 0.419326 5:-94015760 None:intergenic
CGTTCTTTGCGATTAGCATT+GGG 0.423854 5:+94014365 MsG0580029230.01.T01:CDS
TCGCCGAAGGCAAAGATGGC+AGG 0.432688 5:-94013971 None:intergenic
AGTGGCCTTAGCTAAGGTCT+TGG 0.434034 5:+94014249 MsG0580029230.01.T01:CDS
CTCTCAATCGTCATTAGTAT+TGG 0.434339 5:-94015173 None:intergenic
CGTTTGTGAATCTACCGGTT+GGG 0.439505 5:-94014084 None:intergenic
GGAGGTAATTCTAACTAGTA+AGG 0.455531 5:-94015861 None:intergenic
TAATAATTACCGTATTTGGT+TGG 0.463965 5:-94015374 None:intergenic
ACCCCTGCCATCTTTGCCTT+CGG 0.464714 5:+94013968 MsG0580029230.01.T01:CDS
GCGTTCTTTGCGATTAGCAT+TGG 0.475649 5:+94014364 MsG0580029230.01.T01:CDS
GTCCAATACCCAACCAAATA+CGG 0.478205 5:+94015365 MsG0580029230.01.T01:CDS
CCGTTTGTGAATCTACCGGT+TGG 0.478281 5:-94014085 None:intergenic
GGAGTCGCCGAAGGCAAAGA+TGG 0.493618 5:-94013975 None:intergenic
AGCATCCCAAAACAGATACT+TGG 0.494461 5:-94015770 None:intergenic
ATGTCAAGTTCATTGCAAAC+AGG 0.504675 5:-94015730 None:intergenic
CCTTAGCTAAGGCCACTGTT+TGG 0.505645 5:-94014243 None:intergenic
CCGATAATGATTTGTTAACC+GGG 0.505924 5:+94014185 MsG0580029230.01.T01:CDS
ACAAGAAGGGTACTCAGTTA+TGG 0.506665 5:+94015804 MsG0580029230.01.T01:CDS
GCTCGAAGGTTTATGTTGGC+AGG 0.509716 5:+94015128 MsG0580029230.01.T01:CDS
AATCATTATCGGTAACTTGA+GGG 0.510339 5:-94014174 None:intergenic
TGGAACAGGGACATTGGAGT+TGG 0.511378 5:+94015705 MsG0580029230.01.T01:CDS
TTCCAGAGAATGTATGGAGC+AGG 0.514762 5:+94015104 MsG0580029230.01.T01:intron
TTTCCAAACCAAATCCCAAC+CGG 0.516644 5:+94014070 MsG0580029230.01.T01:CDS
GTATTGGACCATATCAAGAA+TGG 0.519077 5:-94015351 None:intergenic
GGCGACTCCACCATTGATGC+CGG 0.524779 5:+94013989 MsG0580029230.01.T01:CDS
TCTAACTAGTAAGGTATGAA+AGG 0.528213 5:-94015852 None:intergenic
AATATGCAATCTTAGCATCA+TGG 0.529100 5:-94015313 None:intergenic
CTTTCCGTTTGTGAATCTAC+CGG 0.530447 5:-94014089 None:intergenic
TTGGCAGGTCTCCCTCCAGT+TGG 0.534096 5:+94015143 MsG0580029230.01.T01:CDS
AAATCATTATCGGTAACTTG+AGG 0.538713 5:-94014175 None:intergenic
ATGCTGTGGAACAGGGACAT+TGG 0.539454 5:+94015699 MsG0580029230.01.T01:CDS
CGCCGAAGGCAAAGATGGCA+GGG 0.539960 5:-94013970 None:intergenic
GGAACAGGGACATTGGAGTT+GGG 0.540432 5:+94015706 MsG0580029230.01.T01:CDS
TATTGGACCATATCAAGAAT+GGG 0.542270 5:-94015350 None:intergenic
AGTATTGGAAGACAACCAAC+TGG 0.543135 5:-94015158 None:intergenic
CGTTGTGACCACTTGCCCTA+CGG 0.547938 5:+94014040 MsG0580029230.01.T01:CDS
TTTGAGAATCAATGTTGTGT+TGG 0.548194 5:-94015238 None:intergenic
CTGAGTACCCTTCTTGTGTA+GGG 0.549047 5:-94015798 None:intergenic
GTTTGGAAAATCACGACCGT+AGG 0.552596 5:-94014056 None:intergenic
CCAAACAGTGGCCTTAGCTA+AGG 0.553598 5:+94014243 MsG0580029230.01.T01:CDS
GCTGTGCACCCTACACAAGA+AGG 0.554097 5:+94015790 MsG0580029230.01.T01:CDS
ACTGAGTACCCTTCTTGTGT+AGG 0.563553 5:-94015799 None:intergenic
ATCCTTCACGTGAATTCTCA+AGG 0.565837 5:-94015678 None:intergenic
ATCAATGGTGGAGTCGCCGA+AGG 0.573448 5:-94013984 None:intergenic
TGTTTGAACAAGCTTTGTTG+AGG 0.574397 5:+94014293 MsG0580029230.01.T01:CDS
AGGAGCTCGAAGGTTTATGT+TGG 0.574803 5:+94015124 MsG0580029230.01.T01:CDS
GATTACCTTAGCCAAAAGCT+AGG 0.577099 5:+94014121 MsG0580029230.01.T01:CDS
ACTTGAGGGTCAAGAAAAGC+GGG 0.581751 5:-94014160 None:intergenic
TTTGGAAAATCACGACCGTA+GGG 0.588915 5:-94014055 None:intergenic
GTGAAGGATGCTGTGGAACA+GGG 0.602235 5:+94015692 MsG0580029230.01.T01:CDS
CCCCGAGCCAAAACTAACCC+CGG 0.606961 5:-94014203 None:intergenic
GTTGTTGCCGGCATCAATGG+TGG 0.608298 5:-94013996 None:intergenic
AACTTGAGGGTCAAGAAAAG+CGG 0.612386 5:-94014161 None:intergenic
AATCACGACCGTAGGGCAAG+TGG 0.612416 5:-94014048 None:intergenic
ACAGATACTTGGATGGATCA+GGG 0.614768 5:-94015759 None:intergenic
GCCGAAGGCAAAGATGGCAG+GGG 0.615010 5:-94013969 None:intergenic
CAAATCCAAGACCTTAGCTA+AGG 0.617591 5:-94014254 None:intergenic
CCAACCGGTAGATTCACAAA+CGG 0.620096 5:+94014085 MsG0580029230.01.T01:CDS
TCCCAAAACAGATACTTGGA+TGG 0.625307 5:-94015766 None:intergenic
AAGGATAGTAGTCTGTAGAC+CGG 0.630067 5:-94015833 None:intergenic
GGCCTTGAGAATTCACGTGA+AGG 0.633689 5:+94015676 MsG0580029230.01.T01:intron
AACGCATTGCGGTGTCTATG+TGG 0.635609 5:-94014021 None:intergenic
CTGTGCACCCTACACAAGAA+GGG 0.648737 5:+94015791 MsG0580029230.01.T01:CDS
TTGGAAGACAACCAACTGGA+GGG 0.649150 5:-94015154 None:intergenic
AATCTTAGCATCATGGAGTG+TGG 0.656184 5:-94015306 None:intergenic
TACTCAGTTATGGTTAACAC+CGG 0.658297 5:+94015814 MsG0580029230.01.T01:CDS
CGATAATGATTTGTTAACCG+GGG 0.659598 5:+94014186 MsG0580029230.01.T01:CDS
AATTCACGTGAAGGATGCTG+TGG 0.660408 5:+94015685 MsG0580029230.01.T01:CDS
ATGACACAAAATACTCCACA+TGG 0.677728 5:+94014415 MsG0580029230.01.T01:CDS
AGGTTTGGATAGCCAAACAG+TGG 0.677829 5:+94014231 MsG0580029230.01.T01:CDS
ATTGGAAGACAACCAACTGG+AGG 0.686502 5:-94015155 None:intergenic
GTTGGTCGTTGCAAACACGT+TGG 0.688097 5:-94015220 None:intergenic
TGTATGGAGCAGGAGCTCGA+AGG 0.691804 5:+94015114 MsG0580029230.01.T01:CDS
CAAGTGGTCACAACGCATTG+CGG 0.722575 5:-94014032 None:intergenic
TAAGATGAAACAGAACCATG+TGG 0.723069 5:-94014430 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAATAATTACCGTATT+TGG - Chr5:94015381-94015400 None:intergenic 15.0%
!! TTGCAATAAATTATGAATAA+GGG - Chr5:94015285-94015304 None:intergenic 15.0%
!! TTTGCAATAAATTATGAATA+AGG - Chr5:94015286-94015305 None:intergenic 15.0%
!!! AAATTTTCCTAACAAATTTT+AGG - Chr5:94014783-94014802 None:intergenic 15.0%
!!! AATTTTCCTAACAAATTTTA+GGG - Chr5:94014782-94014801 None:intergenic 15.0%
!!! AGAAAAACAATAACAAATTT+TGG + Chr5:94015476-94015495 MsG0580029230.01.T01:intron 15.0%
!! AAACATAATAATATATGCAG+AGG + Chr5:94015548-94015567 MsG0580029230.01.T01:intron 20.0%
!! AACATAATAATATATGCAGA+GGG + Chr5:94015549-94015568 MsG0580029230.01.T01:intron 20.0%
!! CATATTCTATAATGAAGTTA+AGG - Chr5:94014627-94014646 None:intergenic 20.0%
!! TTGTACTATGCATAAAAAAA+GGG - Chr5:94014858-94014877 None:intergenic 20.0%
!!! AAAAATTGTTGGTAATGAAA+AGG + Chr5:94014321-94014340 MsG0580029230.01.T01:CDS 20.0%
!!! ATTTAACCCTAAAATTTGTT+AGG + Chr5:94014773-94014792 MsG0580029230.01.T01:intron 20.0%
!!! TGTTAATACTAACTTGATTT+TGG - Chr5:94014674-94014693 None:intergenic 20.0%
! AATAATTACCGTATTTGGTT+GGG - Chr5:94015376-94015395 None:intergenic 25.0%
! ACATAATAATATATGCAGAG+GGG + Chr5:94015550-94015569 MsG0580029230.01.T01:intron 25.0%
! AGATCACTTTATAGAAAAAC+TGG - Chr5:94015606-94015625 None:intergenic 25.0%
! ATAGAATATGATCAATCGTT+TGG + Chr5:94014637-94014656 MsG0580029230.01.T01:intron 25.0%
! ATCACTTTATAGAAAAACTG+GGG - Chr5:94015604-94015623 None:intergenic 25.0%
! ATTAATTTCCAGAGAATGTA+TGG + Chr5:94015098-94015117 MsG0580029230.01.T01:intron 25.0%
! ATTCTACTTTCATCTAAACA+TGG + Chr5:94014984-94015003 MsG0580029230.01.T01:intron 25.0%
! ATTCTATAATGAAGTTAAGG+AGG - Chr5:94014624-94014643 None:intergenic 25.0%
! CTTGTACTATGCATAAAAAA+AGG - Chr5:94014859-94014878 None:intergenic 25.0%
! GATCACTTTATAGAAAAACT+GGG - Chr5:94015605-94015624 None:intergenic 25.0%
! TAATAATTACCGTATTTGGT+TGG - Chr5:94015377-94015396 None:intergenic 25.0%
! TAGAATATGATCAATCGTTT+GGG + Chr5:94014638-94014657 MsG0580029230.01.T01:intron 25.0%
! TTCTATAATGAAGTTAAGGA+GGG - Chr5:94014623-94014642 None:intergenic 25.0%
! TTGAGGATAAGAAAAATTGT+TGG + Chr5:94014310-94014329 MsG0580029230.01.T01:CDS 25.0%
! TTGGACACTGAAAAAAAAAT+TGG + Chr5:94015495-94015514 MsG0580029230.01.T01:intron 25.0%
!! AAACTCCTAGATTATGTTTT+AGG - Chr5:94014710-94014729 None:intergenic 25.0%
!! AAATCTTCAGAATTTTGTTC+AGG + Chr5:94014471-94014490 MsG0580029230.01.T01:CDS 25.0%
!! AACTCCTAGATTATGTTTTA+GGG - Chr5:94014709-94014728 None:intergenic 25.0%
!!! ATAAAAAAAGGGTACTACTT+TGG - Chr5:94014847-94014866 None:intergenic 25.0%
!!! GAACAAAATTCTGAAGATTT+TGG - Chr5:94014471-94014490 None:intergenic 25.0%
AAATCATTATCGGTAACTTG+AGG - Chr5:94014178-94014197 None:intergenic 30.0%
AATATGCAATCTTAGCATCA+TGG - Chr5:94015316-94015335 None:intergenic 30.0%
AATCATTATCGGTAACTTGA+GGG - Chr5:94014177-94014196 None:intergenic 30.0%
ATGAATAAGGGATTGAAGTT+TGG - Chr5:94015273-94015292 None:intergenic 30.0%
TATTGGACCATATCAAGAAT+GGG - Chr5:94015353-94015372 None:intergenic 30.0%
TGGCAAAATTTATTTAGCAC+TGG - Chr5:94015642-94015661 None:intergenic 30.0%
TTTGAGAATCAATGTTGTGT+TGG - Chr5:94015241-94015260 None:intergenic 30.0%
! TTTGCCAAATAAATTTTGCC+AGG + Chr5:94015655-94015674 MsG0580029230.01.T01:intron 30.0%
! TTTTACTATGAGTGGTATGT+GGG + Chr5:94014937-94014956 MsG0580029230.01.T01:intron 30.0%
! TTTTTACTATGAGTGGTATG+TGG + Chr5:94014936-94014955 MsG0580029230.01.T01:intron 30.0%
!! AATCCTTAATTCCTAGCTTT+TGG - Chr5:94014135-94014154 None:intergenic 30.0%
!! ACCGATAATGATTTGTTAAC+CGG + Chr5:94014184-94014203 MsG0580029230.01.T01:CDS 30.0%
!!! TCTTCACTTTTTACTATGAG+TGG + Chr5:94014929-94014948 MsG0580029230.01.T01:intron 30.0%
AAGGCCTGGCAAAATTTATT+TGG - Chr5:94015662-94015681 None:intergenic 35.0%
ATAATGAAGTTAAGGAGGGA+GGG - Chr5:94014619-94014638 None:intergenic 35.0%
ATGACACAAAATACTCCACA+TGG + Chr5:94014415-94014434 MsG0580029230.01.T01:CDS 35.0%
ATGTCAAGTTCATTGCAAAC+AGG - Chr5:94015733-94015752 None:intergenic 35.0%
CCCGGTTAACAAATCATTAT+CGG - Chr5:94014188-94014207 None:intergenic 35.0%
CGAACCCTAAAACATAATCT+AGG + Chr5:94014702-94014721 MsG0580029230.01.T01:intron 35.0%
CTATACACCCATTCTTGATA+TGG + Chr5:94015343-94015362 MsG0580029230.01.T01:CDS 35.0%
CTCTCAATCGTCATTAGTAT+TGG - Chr5:94015176-94015195 None:intergenic 35.0%
GTATTGGACCATATCAAGAA+TGG - Chr5:94015354-94015373 None:intergenic 35.0%
TAAGATGAAACAGAACCATG+TGG - Chr5:94014433-94014452 None:intergenic 35.0%
TACTCAGTTATGGTTAACAC+CGG + Chr5:94015814-94015833 MsG0580029230.01.T01:CDS 35.0%
TAGCCAAAAGCTAGGAATTA+AGG + Chr5:94014129-94014148 MsG0580029230.01.T01:CDS 35.0%
TATAATGAAGTTAAGGAGGG+AGG - Chr5:94014620-94014639 None:intergenic 35.0%
TTAGCTAAGGTCTTGGATTT+GGG + Chr5:94014256-94014275 MsG0580029230.01.T01:CDS 35.0%
! ATCCATCCAAGTATCTGTTT+TGG + Chr5:94015764-94015783 MsG0580029230.01.T01:CDS 35.0%
! TAATCGCAAAGAACGCATTT+TGG - Chr5:94014360-94014379 None:intergenic 35.0%
! TCCATCCAAGTATCTGTTTT+GGG + Chr5:94015765-94015784 MsG0580029230.01.T01:CDS 35.0%
!! CCGATAATGATTTGTTAACC+GGG + Chr5:94014185-94014204 MsG0580029230.01.T01:CDS 35.0%
!! CGATAATGATTTGTTAACCG+GGG + Chr5:94014186-94014205 MsG0580029230.01.T01:CDS 35.0%
!! GGCATTTGATTTGTATCTCT+AGG + Chr5:94014958-94014977 MsG0580029230.01.T01:intron 35.0%
!! TAATTCCTAGCTTTTGGCTA+AGG - Chr5:94014129-94014148 None:intergenic 35.0%
!! TAGCTTTTGGCTAAGGTAAT+CGG - Chr5:94014122-94014141 None:intergenic 35.0%
!! TGTTTGAACAAGCTTTGTTG+AGG + Chr5:94014293-94014312 MsG0580029230.01.T01:CDS 35.0%
!! TTTAGCACTGGCAAATTCTA+AGG - Chr5:94015630-94015649 None:intergenic 35.0%
AACAGATACTTGGATGGATC+AGG - Chr5:94015763-94015782 None:intergenic 40.0%
AACTTGAGGGTCAAGAAAAG+CGG - Chr5:94014164-94014183 None:intergenic 40.0%
AAGGATAGTAGTCTGTAGAC+CGG - Chr5:94015836-94015855 None:intergenic 40.0%
AATCTTAGCATCATGGAGTG+TGG - Chr5:94015309-94015328 None:intergenic 40.0%
ACAGATACTTGGATGGATCA+GGG - Chr5:94015762-94015781 None:intergenic 40.0%
AGCATCCCAAAACAGATACT+TGG - Chr5:94015773-94015792 None:intergenic 40.0%
ATCCTTCACGTGAATTCTCA+AGG - Chr5:94015681-94015700 None:intergenic 40.0%
CAAATCCAAGACCTTAGCTA+AGG - Chr5:94014257-94014276 None:intergenic 40.0%
CGTTCTTTGCGATTAGCATT+GGG + Chr5:94014365-94014384 MsG0580029230.01.T01:CDS 40.0%
CTTAGCTAAGGTCTTGGATT+TGG + Chr5:94014255-94014274 MsG0580029230.01.T01:CDS 40.0%
CTTTCCGTTTGTGAATCTAC+CGG - Chr5:94014092-94014111 None:intergenic 40.0%
GATTACCTTAGCCAAAAGCT+AGG + Chr5:94014121-94014140 MsG0580029230.01.T01:CDS 40.0%
GTCCAATACCCAACCAAATA+CGG + Chr5:94015365-94015384 MsG0580029230.01.T01:CDS 40.0%
TACCGTATTTGGTTGGGTAT+TGG - Chr5:94015370-94015389 None:intergenic 40.0%
TCCCAAAACAGATACTTGGA+TGG - Chr5:94015769-94015788 None:intergenic 40.0%
TTTCCAAACCAAATCCCAAC+CGG + Chr5:94014070-94014089 MsG0580029230.01.T01:CDS 40.0%
TTTGGAAAATCACGACCGTA+GGG - Chr5:94014058-94014077 None:intergenic 40.0%
! AGAGAGAGAGAGAGTACATA+TGG - Chr5:94014568-94014587 None:intergenic 40.0%
! AGTATTGGAAGACAACCAAC+TGG - Chr5:94015161-94015180 None:intergenic 40.0%
!! ACAAGAAGGGTACTCAGTTA+TGG + Chr5:94015804-94015823 MsG0580029230.01.T01:CDS 40.0%
!! TTTTGGCTAAGGTAATCGGT+TGG - Chr5:94014118-94014137 None:intergenic 40.0%
!!! AGGGGTTTTATTGAAGGCAA+TGG - Chr5:94013954-94013973 None:intergenic 40.0%
!!! TTGTTAACCGGGGTTAGTTT+TGG + Chr5:94014196-94014215 MsG0580029230.01.T01:CDS 40.0%
AATTCACGTGAAGGATGCTG+TGG + Chr5:94015685-94015704 MsG0580029230.01.T01:CDS 45.0%
ACTGAGTACCCTTCTTGTGT+AGG - Chr5:94015802-94015821 None:intergenic 45.0%
ACTTGAGGGTCAAGAAAAGC+GGG - Chr5:94014163-94014182 None:intergenic 45.0%
AGGAGCTCGAAGGTTTATGT+TGG + Chr5:94015124-94015143 MsG0580029230.01.T01:CDS 45.0%
AGGTTTGGATAGCCAAACAG+TGG + Chr5:94014231-94014250 MsG0580029230.01.T01:CDS 45.0%
ATAATATATGCAGAGGGGCC+AGG + Chr5:94015555-94015574 MsG0580029230.01.T01:intron 45.0%
ATTGGAAGACAACCAACTGG+AGG - Chr5:94015158-94015177 None:intergenic 45.0%
CCAACCGGTAGATTCACAAA+CGG + Chr5:94014085-94014104 MsG0580029230.01.T01:CDS 45.0%
CTGAGTACCCTTCTTGTGTA+GGG - Chr5:94015801-94015820 None:intergenic 45.0%
GCGTTCTTTGCGATTAGCAT+TGG + Chr5:94014364-94014383 MsG0580029230.01.T01:CDS 45.0%
GTTTGGAAAATCACGACCGT+AGG - Chr5:94014059-94014078 None:intergenic 45.0%
TAATATATGCAGAGGGGCCA+GGG + Chr5:94015556-94015575 MsG0580029230.01.T01:intron 45.0%
TTCCAGAGAATGTATGGAGC+AGG + Chr5:94015104-94015123 MsG0580029230.01.T01:intron 45.0%
TTGAAGGCAATGGCTGAGTT+TGG - Chr5:94013944-94013963 None:intergenic 45.0%
TTGGAAGACAACCAACTGGA+GGG - Chr5:94015157-94015176 None:intergenic 45.0%
! AAACACGTTGGAGCCAGTTT+TGG - Chr5:94015211-94015230 None:intergenic 45.0%
! CGTTTGTGAATCTACCGGTT+GGG - Chr5:94014087-94014106 None:intergenic 45.0%
! GTCTATGTGGTTGTTGTTGC+CGG - Chr5:94014011-94014030 None:intergenic 45.0%
! TGAATCTACCGGTTGGGATT+TGG - Chr5:94014081-94014100 None:intergenic 45.0%
!!! GATGGCAGGGGTTTTATTGA+AGG - Chr5:94013960-94013979 None:intergenic 45.0%
AACGCATTGCGGTGTCTATG+TGG - Chr5:94014024-94014043 None:intergenic 50.0%
AAGTTAAGGAGGGAGGGAGA+GGG - Chr5:94014613-94014632 None:intergenic 50.0%
ATGCTGTGGAACAGGGACAT+TGG + Chr5:94015699-94015718 MsG0580029230.01.T01:CDS 50.0%
CAAGTGGTCACAACGCATTG+CGG - Chr5:94014035-94014054 None:intergenic 50.0%
CCGTTTGTGAATCTACCGGT+TGG - Chr5:94014088-94014107 None:intergenic 50.0%
CCTTAGCTAAGGCCACTGTT+TGG - Chr5:94014246-94014265 None:intergenic 50.0%
CTCCTGCTCCATACATTCTC+TGG - Chr5:94015109-94015128 None:intergenic 50.0%
CTGTGCACCCTACACAAGAA+GGG + Chr5:94015791-94015810 MsG0580029230.01.T01:CDS 50.0%
GCATCTCACCTAGCCAAAAC+TGG + Chr5:94015195-94015214 MsG0580029230.01.T01:CDS 50.0%
GCTCGAAGGTTTATGTTGGC+AGG + Chr5:94015128-94015147 MsG0580029230.01.T01:CDS 50.0%
GGAACAGGGACATTGGAGTT+GGG + Chr5:94015706-94015725 MsG0580029230.01.T01:CDS 50.0%
GGCCTTGAGAATTCACGTGA+AGG + Chr5:94015676-94015695 MsG0580029230.01.T01:intron 50.0%
GTGAAGGATGCTGTGGAACA+GGG + Chr5:94015692-94015711 MsG0580029230.01.T01:CDS 50.0%
GTTGGTCGTTGCAAACACGT+TGG - Chr5:94015223-94015242 None:intergenic 50.0%
TCACGTGAATTCTCAAGGCC+TGG - Chr5:94015676-94015695 None:intergenic 50.0%
TGGAACAGGGACATTGGAGT+TGG + Chr5:94015705-94015724 MsG0580029230.01.T01:CDS 50.0%
! AGTGGCCTTAGCTAAGGTCT+TGG + Chr5:94014249-94014268 MsG0580029230.01.T01:CDS 50.0%
! CCAAACAGTGGCCTTAGCTA+AGG + Chr5:94014243-94014262 MsG0580029230.01.T01:CDS 50.0%
! CTACCGGTTGGGATTTGGTT+TGG - Chr5:94014076-94014095 None:intergenic 50.0%
! GTTGTTGTTGCCGGCATCAA+TGG - Chr5:94014002-94014021 None:intergenic 50.0%
!!! AACCGGGGTTAGTTTTGGCT+CGG + Chr5:94014201-94014220 MsG0580029230.01.T01:CDS 50.0%
AATCACGACCGTAGGGCAAG+TGG - Chr5:94014051-94014070 None:intergenic 55.0%
ACCCCTGCCATCTTTGCCTT+CGG + Chr5:94013968-94013987 MsG0580029230.01.T01:CDS 55.0%
AGGGGCCAGGGTTTGAATCT+CGG + Chr5:94015568-94015587 MsG0580029230.01.T01:intron 55.0%
CGTGAAGGATGCTGTGGAAC+AGG + Chr5:94015691-94015710 MsG0580029230.01.T01:CDS 55.0%
CGTTGTGACCACTTGCCCTA+CGG + Chr5:94014040-94014059 MsG0580029230.01.T01:CDS 55.0%
GAAGTTAAGGAGGGAGGGAG+AGG - Chr5:94014614-94014633 None:intergenic 55.0%
GCTGTGCACCCTACACAAGA+AGG + Chr5:94015790-94015809 MsG0580029230.01.T01:CDS 55.0%
GTGCTCCGAGATTCAAACCC+TGG - Chr5:94015576-94015595 None:intergenic 55.0%
GTTGTTGCCGGCATCAATGG+TGG - Chr5:94013999-94014018 None:intergenic 55.0%
TGTATGGAGCAGGAGCTCGA+AGG + Chr5:94015114-94015133 MsG0580029230.01.T01:CDS 55.0%
! ATCAATGGTGGAGTCGCCGA+AGG - Chr5:94013987-94014006 None:intergenic 55.0%
!!! ACCGGGGTTAGTTTTGGCTC+GGG + Chr5:94014202-94014221 MsG0580029230.01.T01:CDS 55.0%
!!! CGTTGGAGCCAGTTTTGGCT+AGG - Chr5:94015206-94015225 None:intergenic 55.0%
CCCCGAGCCAAAACTAACCC+CGG - Chr5:94014206-94014225 None:intergenic 60.0%
CGCCGAAGGCAAAGATGGCA+GGG - Chr5:94013973-94013992 None:intergenic 60.0%
GCCGAAGGCAAAGATGGCAG+GGG - Chr5:94013972-94013991 None:intergenic 60.0%
GGAGTCGCCGAAGGCAAAGA+TGG - Chr5:94013978-94013997 None:intergenic 60.0%
GGCGACTCCACCATTGATGC+CGG + Chr5:94013989-94014008 MsG0580029230.01.T01:CDS 60.0%
TCGCCGAAGGCAAAGATGGC+AGG - Chr5:94013974-94013993 None:intergenic 60.0%
TTGGCAGGTCTCCCTCCAGT+TGG + Chr5:94015143-94015162 MsG0580029230.01.T01:CDS 60.0%
!!! AGTTTTGGCTCGGGGGGTTC+AGG + Chr5:94014211-94014230 MsG0580029230.01.T01:CDS 60.0%
!!! CCGGGGTTAGTTTTGGCTCG+GGG + Chr5:94014203-94014222 MsG0580029230.01.T01:CDS 60.0%
!!! CGGGGTTAGTTTTGGCTCGG+GGG + Chr5:94014204-94014223 MsG0580029230.01.T01:CDS 60.0%
!!! GGGGTTAGTTTTGGCTCGGG+GGG + Chr5:94014205-94014224 MsG0580029230.01.T01:CDS 60.0%
AAGGAGGGAGGGAGAGGGAG+AGG - Chr5:94014608-94014627 None:intergenic 65.0%
AGGAGGGAGGGAGAGGGAGA+GGG - Chr5:94014607-94014626 None:intergenic 65.0%
! TGGCTCGGGGGGTTCAGGTT+TGG + Chr5:94014216-94014235 MsG0580029230.01.T01:CDS 65.0%
AGGGAGAGGGAGAGGGGGAG+GGG - Chr5:94014600-94014619 None:intergenic 70.0%
GAGGGAGAGGGAGAGGGGGA+GGG - Chr5:94014601-94014620 None:intergenic 70.0%
GAGGGAGGGAGAGGGAGAGG+GGG - Chr5:94014605-94014624 None:intergenic 70.0%
GGAGGGAGGGAGAGGGAGAG+GGG - Chr5:94014606-94014625 None:intergenic 70.0%
AGAGGGAGAGGGGGAGGGGG+AGG - Chr5:94014596-94014615 None:intergenic 75.0%
GAGGGAGAGGGGGAGGGGGA+GGG - Chr5:94014595-94014614 None:intergenic 75.0%
GGAGGGAGAGGGAGAGGGGG+AGG - Chr5:94014602-94014621 None:intergenic 75.0%
GGGAGAGGGAGAGGGGGAGG+GGG - Chr5:94014599-94014618 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 94013938 94015873 94013938 ID=MsG0580029230.01;Name=MsG0580029230.01
Chr5 mRNA 94013938 94015873 94013938 ID=MsG0580029230.01.T01;Parent=MsG0580029230.01;Name=MsG0580029230.01.T01;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|1|1|3|0|342
Chr5 exon 94013938 94014492 94013938 ID=MsG0580029230.01.T01:exon:49733;Parent=MsG0580029230.01.T01
Chr5 exon 94015110 94015386 94015110 ID=MsG0580029230.01.T01:exon:49734;Parent=MsG0580029230.01.T01
Chr5 exon 94015677 94015873 94015677 ID=MsG0580029230.01.T01:exon:49735;Parent=MsG0580029230.01.T01
Chr5 CDS 94013938 94014492 94013938 ID=MsG0580029230.01.T01:cds;Parent=MsG0580029230.01.T01
Chr5 CDS 94015110 94015386 94015110 ID=MsG0580029230.01.T01:cds;Parent=MsG0580029230.01.T01
Chr5 CDS 94015677 94015873 94015677 ID=MsG0580029230.01.T01:cds;Parent=MsG0580029230.01.T01
Gene Sequence

>MsG0580029230.01.T01

ATGCCAAACTCAGCCATTGCCTTCAATAAAACCCCTGCCATCTTTGCCTTCGGCGACTCCACCATTGATGCCGGCAACAACAACCACATAGACACCGCAATGCGTTGTGACCACTTGCCCTACGGTCGTGATTTTCCAAACCAAATCCCAACCGGTAGATTCACAAACGGAAAGTTACCAACCGATTACCTTAGCCAAAAGCTAGGAATTAAGGATTTATTGCCCGCTTTTCTTGACCCTCAAGTTACCGATAATGATTTGTTAACCGGGGTTAGTTTTGGCTCGGGGGGTTCAGGTTTGGATAGCCAAACAGTGGCCTTAGCTAAGGTCTTGGATTTGGGTACACAATTTCAGTTGTTTGAACAAGCTTTGTTGAGGATAAGAAAAATTGTTGGTAATGAAAAGGCTAAAGATATAATCCAAAATGCGTTCTTTGCGATTAGCATTGGGACTAATGATATGTTGTACAGTGTTTATATGACACAAAATACTCCACATGGTTCTGTTTCATCTTATCAAGATTTTATGCTCCAAAATCTTCAGAATTTTGTTCAGAGAATGTATGGAGCAGGAGCTCGAAGGTTTATGTTGGCAGGTCTCCCTCCAGTTGGTTGTCTTCCAATACTAATGACGATTGAGAGCATCTCACCTAGCCAAAACTGGCTCCAACGTGTTTGCAACGACCAACACAACATTGATTCTCAAATTTACAACACCAAACTTCAATCCCTTATTCATAATTTATTGCAAACCACACTCCATGATGCTAAGATTGCATATTTTGATATCTATACACCCATTCTTGATATGGTCCAATACCCAACCAAATACGGCCTTGAGAATTCACGTGAAGGATGCTGTGGAACAGGGACATTGGAGTTGGGTCCTGTTTGCAATGAACTTGACATGATTTGCCCTGATCCATCCAAGTATCTGTTTTGGGATGCTGTGCACCCTACACAAGAAGGGTACTCAGTTATGGTTAACACCGGTCTACAGACTACTATCCTTTCATACCTTACTAGTTAG

Protein sequence

>MsG0580029230.01.T01

MPNSAIAFNKTPAIFAFGDSTIDAGNNNHIDTAMRCDHLPYGRDFPNQIPTGRFTNGKLPTDYLSQKLGIKDLLPAFLDPQVTDNDLLTGVSFGSGGSGLDSQTVALAKVLDLGTQFQLFEQALLRIRKIVGNEKAKDIIQNAFFAISIGTNDMLYSVYMTQNTPHGSVSSYQDFMLQNLQNFVQRMYGAGARRFMLAGLPPVGCLPILMTIESISPSQNWLQRVCNDQHNIDSQIYNTKLQSLIHNLLQTTLHDAKIAYFDIYTPILDMVQYPTKYGLENSREGCCGTGTLELGPVCNELDMICPDPSKYLFWDAVHPTQEGYSVMVNTGLQTTILSYLTS*