AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028554.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028554.01.T01 MTR_5g074270 94.823 367 16 2 1 365 1 366 0.0 712
MsG0580028554.01.T01 MTR_5g074210 90.854 164 15 0 201 364 58 221 7.50e-111 323
MsG0580028554.01.T01 MTR_4g087985 44.476 353 181 5 9 352 17 363 5.03e-105 313
MsG0580028554.01.T01 MTR_3g082830 43.598 328 182 3 29 355 34 359 2.32e-97 293
MsG0580028554.01.T01 MTR_2g015080 42.816 348 179 7 2 337 11 350 4.36e-97 293
MsG0580028554.01.T01 MTR_1g025780 43.750 336 184 4 2 337 12 342 4.18e-94 285
MsG0580028554.01.T01 MTR_3g114090 41.026 351 199 3 5 348 6 355 1.32e-92 281
MsG0580028554.01.T01 MTR_5g084750 41.566 332 191 3 26 356 23 352 1.84e-92 281
MsG0580028554.01.T01 MTR_1g025760 40.698 344 201 3 1 343 48 389 2.30e-92 282
MsG0580028554.01.T01 MTR_5g084770 41.049 324 189 2 33 355 28 350 1.56e-91 278
MsG0580028554.01.T01 MTR_5g084790 40.785 331 193 3 26 355 25 353 1.82e-91 278
MsG0580028554.01.T01 MTR_3g464730 39.216 357 207 5 1 355 2 350 2.40e-91 278
MsG0580028554.01.T01 MTR_1g025680 41.292 356 195 4 5 350 8 359 2.28e-90 279
MsG0580028554.01.T01 MTR_1g025720 39.710 345 202 3 1 341 1 343 4.96e-89 272
MsG0580028554.01.T01 MTR_1g025700 39.773 352 208 3 7 356 22 371 1.22e-88 271
MsG0580028554.01.T01 MTR_8g014910 42.767 318 178 4 29 344 28 343 1.26e-88 271
MsG0580028554.01.T01 MTR_3g114120 43.385 325 178 3 31 355 45 363 1.30e-88 271
MsG0580028554.01.T01 MTR_2g100620 43.082 318 177 4 29 344 27 342 2.89e-87 268
MsG0580028554.01.T01 MTR_5g083040 42.675 314 172 4 30 337 29 340 5.65e-87 267
MsG0580028554.01.T01 MTR_5g022630 42.671 307 173 3 33 337 43 348 1.68e-84 261
MsG0580028554.01.T01 MTR_8g075230 41.692 331 185 4 8 337 16 339 3.39e-84 260
MsG0580028554.01.T01 MTR_8g075220 42.857 329 180 5 33 355 40 366 2.89e-83 258
MsG0580028554.01.T01 MTR_8g075200 39.831 354 209 4 3 355 12 362 5.93e-83 258
MsG0580028554.01.T01 MTR_5g022640 42.071 309 175 4 31 337 41 347 1.72e-82 256
MsG0580028554.01.T01 MTR_4g056160 40.741 324 188 2 33 353 27 349 1.01e-80 251
MsG0580028554.01.T01 MTR_2g084585 40.557 323 189 3 23 344 20 340 2.39e-79 247
MsG0580028554.01.T01 MTR_1g025910 40.864 301 173 4 38 337 41 337 4.09e-75 237
MsG0580028554.01.T01 MTR_4g056280 39.241 316 189 3 33 347 30 343 2.87e-72 229
MsG0580028554.01.T01 MTR_7g116520 34.412 340 216 5 11 347 12 347 8.41e-67 215
MsG0580028554.01.T01 MTR_6g021530 37.304 319 192 6 33 347 29 343 2.95e-66 214
MsG0580028554.01.T01 MTR_7g116500 33.721 344 218 7 5 345 8 344 4.52e-66 213
MsG0580028554.01.T01 MTR_1g069175 33.718 347 221 6 5 347 7 348 5.43e-65 211
MsG0580028554.01.T01 MTR_7g116570 35.714 322 200 5 29 347 30 347 9.42e-65 210
MsG0580028554.01.T01 MTR_1g079540 34.012 344 217 6 10 347 5 344 5.92e-62 203
MsG0580028554.01.T01 MTR_4g019880 34.494 316 198 6 33 343 32 343 6.58e-61 200
MsG0580028554.01.T01 MTR_5g093090 33.333 336 211 5 13 341 8 337 8.19e-60 197
MsG0580028554.01.T01 MTR_1g024890 34.030 335 214 5 16 347 15 345 9.90e-60 197
MsG0580028554.01.T01 MTR_5g009100 34.472 322 192 7 35 347 48 359 2.13e-59 196
MsG0580028554.01.T01 MTR_2g033920 37.267 322 190 8 30 345 32 347 2.18e-59 196
MsG0580028554.01.T01 MTR_7g116510 34.277 318 203 5 33 347 25 339 5.71e-59 195
MsG0580028554.01.T01 MTR_1g079530 33.430 344 212 8 9 347 5 336 1.76e-58 194
MsG0580028554.01.T01 MTR_3g052490 34.169 319 197 5 30 341 29 341 3.83e-57 190
MsG0580028554.01.T01 MTR_8g079050 35.227 352 212 10 5 347 13 357 1.30e-56 189
MsG0580028554.01.T01 MTR_4g122200 36.449 321 194 7 30 345 32 347 4.11e-55 185
MsG0580028554.01.T01 MTR_3g052480 34.985 323 190 7 30 341 30 343 7.15e-55 184
MsG0580028554.01.T01 MTR_3g435540 33.739 329 205 7 35 359 25 344 1.89e-54 183
MsG0580028554.01.T01 MTR_8g087890 35.647 317 190 10 35 345 33 341 2.05e-54 183
MsG0580028554.01.T01 MTR_2g033930 34.579 321 196 9 33 347 32 344 2.43e-54 183
MsG0580028554.01.T01 MTR_4g108690 32.424 330 210 7 35 360 29 349 3.00e-54 183
MsG0580028554.01.T01 MTR_3g024510 33.236 343 216 9 10 345 12 348 2.08e-53 181
MsG0580028554.01.T01 MTR_4g035353 32.164 342 215 8 3 339 7 336 2.73e-53 180
MsG0580028554.01.T01 MTR_3g098270 33.523 352 223 8 1 345 1 348 4.90e-53 180
MsG0580028554.01.T01 MTR_0565s0010 33.046 348 221 9 4 345 2 343 4.98e-53 179
MsG0580028554.01.T01 MTR_8g022810 32.861 353 218 10 1 344 10 352 1.66e-52 178
MsG0580028554.01.T01 MTR_7g008060 30.000 350 225 7 1 347 1 333 3.89e-52 177
MsG0580028554.01.T01 MTR_2g044100 30.623 369 236 8 5 359 11 373 1.53e-51 176
MsG0580028554.01.T01 MTR_5g078210 30.699 329 220 6 19 345 12 334 3.11e-51 174
MsG0580028554.01.T01 MTR_3g052580 32.923 325 196 8 30 343 25 338 1.15e-50 174
MsG0580028554.01.T01 MTR_3g052580 32.923 325 196 8 30 343 24 337 2.26e-50 174
MsG0580028554.01.T01 MTR_3g005650 30.058 346 218 9 3 345 12 336 3.07e-48 167
MsG0580028554.01.T01 MTR_8g074570 32.123 358 209 12 3 344 11 350 2.23e-47 165
MsG0580028554.01.T01 MTR_8g022790 30.347 346 227 6 6 347 7 342 7.10e-46 160
MsG0580028554.01.T01 MTR_5g093090 33.910 289 178 5 13 294 8 290 1.11e-45 159
MsG0580028554.01.T01 MTR_3g005660 31.366 322 211 8 30 345 33 350 7.04e-45 158
MsG0580028554.01.T01 MTR_5g093550 90.541 74 7 0 291 364 76 149 2.61e-44 150
MsG0580028554.01.T01 MTR_1108s0010 40.566 212 113 4 137 347 3 202 5.43e-44 151
MsG0580028554.01.T01 MTR_2g017965 32.099 324 199 12 28 344 28 337 2.49e-43 154
MsG0580028554.01.T01 MTR_8g031430 31.677 322 201 8 33 347 37 346 5.02e-43 153
MsG0580028554.01.T01 MTR_8g087870 30.539 334 212 10 28 357 24 341 1.39e-42 152
MsG0580028554.01.T01 MTR_0009s0250 31.751 337 208 11 19 350 19 338 1.82e-42 151
MsG0580028554.01.T01 MTR_8g031420 28.736 348 225 7 9 347 11 344 1.29e-41 149
MsG0580028554.01.T01 MTR_8g031390 31.173 324 199 10 33 347 37 345 1.63e-41 149
MsG0580028554.01.T01 MTR_2g017925 32.508 323 194 12 28 344 28 332 3.87e-41 148
MsG0580028554.01.T01 MTR_8g074560 28.235 340 230 7 7 337 5 339 1.66e-40 147
MsG0580028554.01.T01 MTR_3g021460 30.514 331 201 12 22 344 20 329 2.48e-40 145
MsG0580028554.01.T01 MTR_2g461580 31.307 329 201 11 22 344 20 329 4.67e-40 145
MsG0580028554.01.T01 MTR_3g023220 32.288 319 188 12 30 341 30 327 8.65e-40 144
MsG0580028554.01.T01 MTR_2g033920 33.219 292 184 7 8 294 10 295 1.03e-39 143
MsG0580028554.01.T01 MTR_2g017875 29.595 321 208 9 29 344 30 337 1.85e-39 144
MsG0580028554.01.T01 MTR_8g031400 29.179 329 214 8 24 345 28 344 1.85e-38 141
MsG0580028554.01.T01 MTR_8g074580 27.833 406 235 11 3 360 17 412 4.38e-38 141
MsG0580028554.01.T01 MTR_8g022810 28.775 351 182 10 1 344 10 299 2.17e-37 137
MsG0580028554.01.T01 MTR_2g017955 30.721 319 201 11 28 340 28 332 4.98e-37 137
MsG0580028554.01.T01 MTR_1g030275 30.986 355 207 15 33 361 39 381 1.37e-36 136
MsG0580028554.01.T01 MTR_2g015630 30.699 329 197 12 38 344 36 355 2.94e-36 135
MsG0580028554.01.T01 MTR_5g078210 29.496 278 189 5 19 294 12 284 5.16e-36 134
MsG0580028554.01.T01 MTR_2g017915 31.013 316 179 12 28 338 28 309 5.33e-35 132
MsG0580028554.01.T01 MTR_2g015580 30.812 357 218 11 29 365 43 390 1.19e-34 131
MsG0580028554.01.T01 MTR_1g030268 28.165 387 235 15 1 361 13 382 1.47e-34 131
MsG0580028554.01.T01 MTR_7g116870 30.457 394 216 17 5 364 9 378 2.19e-34 130
MsG0580028554.01.T01 MTR_7g111780 30.707 368 214 15 1 347 1 348 4.87e-34 129
MsG0580028554.01.T01 MTR_8g031390 32.014 278 170 9 33 306 37 299 6.01e-34 128
MsG0580028554.01.T01 MTR_2g015590 31.200 375 217 15 6 357 13 369 6.76e-33 126
MsG0580028554.01.T01 MTR_1g030340 29.839 372 205 16 5 343 19 367 7.94e-33 126
MsG0580028554.01.T01 MTR_1g030230 27.763 389 231 16 4 361 7 376 1.60e-32 125
MsG0580028554.01.T01 MTR_7g033165 28.814 354 207 12 24 347 24 362 1.81e-32 125
MsG0580028554.01.T01 MTR_1g079590 36.190 210 127 5 1 207 1 206 2.08e-32 121
MsG0580028554.01.T01 MTR_3g463960 31.016 374 214 16 5 345 6 368 1.12e-31 123
MsG0580028554.01.T01 MTR_3g463950 31.016 374 214 16 5 345 6 368 1.12e-31 123
MsG0580028554.01.T01 MTR_3g463970 31.016 374 214 16 5 345 6 368 1.12e-31 123
MsG0580028554.01.T01 MTR_3g463940 31.016 374 214 16 5 345 6 368 1.12e-31 123
MsG0580028554.01.T01 MTR_8g028160 28.101 395 228 15 6 364 11 385 3.65e-31 122
MsG0580028554.01.T01 MTR_4g036375 37.423 163 97 2 33 191 30 191 1.34e-30 115
MsG0580028554.01.T01 MTR_7g104220 29.240 342 196 16 31 356 40 351 2.77e-30 119
MsG0580028554.01.T01 MTR_4g104240 27.642 369 229 12 1 344 1 356 4.19e-30 119
MsG0580028554.01.T01 MTR_5g093090 36.464 181 106 4 13 186 8 186 3.13e-29 112
MsG0580028554.01.T01 MTR_5g087690 26.176 340 224 9 15 345 34 355 1.05e-28 115
MsG0580028554.01.T01 MTR_7g087190 26.016 369 221 12 14 347 24 375 1.57e-28 115
MsG0580028554.01.T01 MTR_1g082390 28.346 381 203 14 6 347 10 359 3.61e-28 113
MsG0580028554.01.T01 MTR_8g089805 26.562 384 221 14 1 347 12 371 7.90e-28 113
MsG0580028554.01.T01 MTR_1g060490 29.532 342 200 15 21 350 27 339 9.01e-28 112
MsG0580028554.01.T01 MTR_6g049230 48.361 122 61 2 209 329 74 194 1.11e-27 108
MsG0580028554.01.T01 MTR_7g113860 29.178 353 189 12 33 347 29 358 1.56e-27 112
MsG0580028554.01.T01 MTR_1g092750 29.394 330 193 15 34 350 41 343 2.60e-27 110
MsG0580028554.01.T01 MTR_1g092760 30.838 334 182 17 34 350 40 341 3.23e-27 110
MsG0580028554.01.T01 MTR_7g113860 28.721 383 201 15 8 347 11 364 6.37e-27 110
MsG0580028554.01.T01 MTR_1g092690 26.933 375 213 17 1 350 14 352 1.12e-26 109
MsG0580028554.01.T01 MTR_7g033150 25.926 378 223 10 8 347 10 368 1.45e-25 106
MsG0580028554.01.T01 MTR_1g030268 28.896 308 188 12 1 294 13 303 3.26e-25 104
MsG0580028554.01.T01 MTR_1g030220 26.359 368 227 14 4 343 13 364 9.86e-25 104
MsG0580028554.01.T01 MTR_7g033155 26.519 362 208 10 30 347 35 382 1.71e-24 103
MsG0580028554.01.T01 MTR_1g092740 28.875 329 195 14 34 350 39 340 2.23e-24 102
MsG0580028554.01.T01 MTR_6g007090 25.526 380 227 11 1 347 6 362 2.75e-24 102
MsG0580028554.01.T01 MTR_1g030265 28.667 300 170 11 95 361 61 349 2.78e-24 102
MsG0580028554.01.T01 MTR_4g036385 43.689 103 57 1 242 343 21 123 3.44e-24 97.1
MsG0580028554.01.T01 MTR_1g060500 29.217 332 198 16 34 350 41 350 4.32e-24 102
MsG0580028554.01.T01 MTR_6g007100 26.431 367 216 14 5 347 9 345 7.49e-24 101
MsG0580028554.01.T01 MTR_2g087292 28.060 335 154 11 19 350 19 269 3.42e-23 98.2
MsG0580028554.01.T01 MTR_2g018015 33.036 224 139 8 29 246 32 250 5.36e-23 98.2
MsG0580028554.01.T01 MTR_3g069780 26.997 363 235 15 1 345 1 351 8.61e-23 98.6
MsG0580028554.01.T01 MTR_3g448360 29.155 367 222 13 1 345 1 351 1.29e-22 98.2
MsG0580028554.01.T01 MTR_2g015650 28.614 339 205 14 31 345 29 354 2.46e-22 97.4
MsG0580028554.01.T01 MTR_6g007095 26.330 376 224 14 5 347 9 364 4.82e-22 98.2
MsG0580028554.01.T01 MTR_6g007095 26.804 291 184 11 72 347 404 680 2.55e-16 80.9
MsG0580028554.01.T01 MTR_2g079090 25.978 358 223 13 6 345 6 339 1.41e-21 95.1
MsG0580028554.01.T01 MTR_4g056220 43.590 117 65 1 232 347 64 180 2.49e-21 90.9
MsG0580028554.01.T01 MTR_2g015670 27.859 341 191 14 31 345 29 340 3.46e-21 94.0
MsG0580028554.01.T01 MTR_7g111780 29.344 259 159 9 103 347 1 249 4.00e-21 92.0
MsG0580028554.01.T01 MTR_8g038680 26.686 341 212 11 33 347 28 356 5.05e-21 93.6
MsG0580028554.01.T01 MTR_7g033165 28.622 283 166 11 33 294 33 300 6.23e-21 92.4
MsG0580028554.01.T01 MTR_0127s0040 30.045 223 137 7 132 344 4 217 8.04e-21 90.5
MsG0580028554.01.T01 MTR_3g438030 26.703 367 231 17 1 345 1 351 9.18e-21 92.8
MsG0580028554.01.T01 MTR_2g015590 29.605 304 182 10 6 294 13 299 1.04e-20 92.0
MsG0580028554.01.T01 MTR_0029s0050 25.895 363 227 13 1 345 1 339 1.26e-20 92.0
MsG0580028554.01.T01 MTR_2g079080 25.698 358 224 13 6 345 6 339 1.49e-20 92.0
MsG0580028554.01.T01 MTR_0029s0100 25.895 363 227 13 1 345 1 339 2.54e-20 91.3
MsG0580028554.01.T01 MTR_6g034400 35.537 121 78 0 88 208 5 125 4.51e-20 85.5
MsG0580028554.01.T01 MTR_3g069520 27.027 370 224 18 1 345 1 349 5.85e-19 87.4
MsG0580028554.01.T01 MTR_6g049220 39.640 111 64 2 31 141 28 135 1.90e-18 82.4
MsG0580028554.01.T01 MTR_8g089805 26.102 295 178 11 85 347 17 303 3.22e-18 84.7
MsG0580028554.01.T01 MTR_7g113860 28.028 289 156 9 97 347 16 290 6.65e-18 83.6
MsG0580028554.01.T01 MTR_2g017925 28.444 225 141 9 126 344 19 229 6.24e-16 77.4
MsG0580028554.01.T01 MTR_8g062580 35.238 105 66 2 243 346 76 179 2.39e-15 75.1
MsG0580028554.01.T01 MTR_5g084880 30.088 113 78 1 182 294 1 112 2.16e-13 67.4
MsG0580028554.01.T01 MTR_1g079570 27.273 121 86 1 227 347 4 122 5.79e-12 63.2
MsG0580028554.01.T01 MTR_8g012540 25.155 322 203 11 33 328 28 337 8.38e-12 66.2
MsG0580028554.01.T01 MTR_5g062890 51.923 52 25 0 33 84 28 79 1.13e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028554.01.T01 AT2G24560 50.568 352 168 2 1 351 7 353 3.53e-136 392
MsG0580028554.01.T01 AT2G30310 50.568 352 168 2 1 351 7 353 4.51e-134 387
MsG0580028554.01.T01 AT1G58430 48.711 349 178 1 4 351 6 354 1.51e-130 378
MsG0580028554.01.T01 AT2G30220 50.720 347 165 2 6 351 11 352 1.80e-130 378
MsG0580028554.01.T01 AT2G31540 47.458 354 185 1 4 356 6 359 6.10e-124 361
MsG0580028554.01.T01 AT1G06990 46.041 341 179 4 1 337 2 341 2.19e-116 342
MsG0580028554.01.T01 AT2G24560 49.839 311 150 2 1 310 7 312 6.90e-111 327
MsG0580028554.01.T01 AT2G40250 47.256 328 166 3 31 353 34 359 2.26e-110 327
MsG0580028554.01.T01 AT5G45960 46.605 324 166 4 21 339 35 356 1.14e-101 305
MsG0580028554.01.T01 AT4G26790 41.033 329 191 3 29 356 25 351 7.09e-96 290
MsG0580028554.01.T01 AT4G26790 41.033 329 191 3 29 356 25 351 7.09e-96 290
MsG0580028554.01.T01 AT2G42990 39.481 347 197 4 1 346 6 340 1.18e-94 286
MsG0580028554.01.T01 AT1G20120 43.731 327 180 4 29 353 74 398 2.65e-94 287
MsG0580028554.01.T01 AT1G75900 42.274 343 190 5 8 347 18 355 1.99e-91 278
MsG0580028554.01.T01 AT2G04570 38.983 354 203 4 3 355 8 349 5.09e-91 277
MsG0580028554.01.T01 AT1G75890 42.991 321 180 3 33 351 47 366 7.51e-91 277
MsG0580028554.01.T01 AT1G75890 42.991 321 180 3 33 351 76 395 1.34e-90 278
MsG0580028554.01.T01 AT1G75880 40.282 355 206 4 5 355 21 373 5.23e-87 268
MsG0580028554.01.T01 AT1G75890 41.317 334 180 4 33 351 47 379 6.14e-87 268
MsG0580028554.01.T01 AT3G16370 43.631 314 173 4 33 344 30 341 1.71e-86 266
MsG0580028554.01.T01 AT5G03810 40.367 327 193 2 28 353 25 350 2.65e-85 263
MsG0580028554.01.T01 AT1G75880 40.169 356 206 5 5 355 21 374 3.46e-85 263
MsG0580028554.01.T01 AT3G14820 41.092 348 188 7 5 346 9 345 5.49e-85 261
MsG0580028554.01.T01 AT5G42170 40.491 326 186 5 15 337 30 350 1.23e-83 259
MsG0580028554.01.T01 AT5G03820 38.592 355 205 5 6 353 6 354 7.43e-83 256
MsG0580028554.01.T01 AT5G45950 41.121 321 182 5 25 345 32 345 1.36e-82 256
MsG0580028554.01.T01 AT5G03820 38.592 355 205 5 6 353 34 382 3.00e-82 256
MsG0580028554.01.T01 AT1G20132 40.764 314 183 3 33 345 61 372 9.63e-81 252
MsG0580028554.01.T01 AT3G53100 40.895 313 182 3 33 344 29 339 8.00e-80 248
MsG0580028554.01.T01 AT5G63170 40.060 332 175 6 8 337 10 319 8.69e-80 248
MsG0580028554.01.T01 AT1G59406 38.372 344 203 6 1 343 1 336 9.12e-79 246
MsG0580028554.01.T01 AT1G59030 38.372 344 203 6 1 343 1 336 9.12e-79 246
MsG0580028554.01.T01 AT1G58725 38.372 344 203 6 1 343 1 336 9.12e-79 246
MsG0580028554.01.T01 AT1G20135 39.432 317 171 7 31 343 27 326 7.21e-78 243
MsG0580028554.01.T01 AT5G22810 38.889 324 192 4 25 344 26 347 5.53e-77 241
MsG0580028554.01.T01 AT2G31550 48.387 217 111 1 141 356 2 218 6.49e-77 236
MsG0580028554.01.T01 AT1G20130 37.538 333 192 4 31 352 182 509 1.78e-73 237
MsG0580028554.01.T01 AT1G20130 37.538 333 192 4 31 352 202 529 3.14e-73 237
MsG0580028554.01.T01 AT1G73610 39.688 320 177 7 29 347 31 335 6.90e-73 230
MsG0580028554.01.T01 AT1G58520 37.421 318 186 5 27 343 24 329 7.11e-72 228
MsG0580028554.01.T01 AT1G58525 37.421 318 186 5 27 343 24 329 7.11e-72 228
MsG0580028554.01.T01 AT1G23500 37.394 353 198 8 1 347 1 336 4.89e-70 223
MsG0580028554.01.T01 AT3G43570 34.012 344 189 7 1 343 1 307 1.94e-69 221
MsG0580028554.01.T01 AT5G33370 36.164 318 196 5 33 347 30 343 2.58e-66 214
MsG0580028554.01.T01 AT1G75920 38.245 319 176 8 33 345 29 332 5.99e-65 210
MsG0580028554.01.T01 AT4G28780 33.754 317 205 5 33 347 31 344 7.28e-62 202
MsG0580028554.01.T01 AT3G04290 34.049 326 208 6 25 347 21 342 7.48e-62 202
MsG0580028554.01.T01 AT1G75920 36.527 334 176 9 33 345 24 342 7.39e-61 199
MsG0580028554.01.T01 AT4G10950 33.228 316 206 5 31 344 69 381 2.65e-59 197
MsG0580028554.01.T01 AT1G75930 36.752 351 200 10 5 351 6 338 3.38e-59 195
MsG0580028554.01.T01 AT1G75910 35.802 324 190 7 33 351 28 338 9.03e-59 194
MsG0580028554.01.T01 AT5G18430 33.333 318 207 4 33 347 28 343 4.34e-58 192
MsG0580028554.01.T01 AT5G08460 36.050 319 193 7 33 344 49 363 6.82e-58 193
MsG0580028554.01.T01 AT4G10950 32.278 316 205 5 31 344 69 377 3.39e-57 191
MsG0580028554.01.T01 AT3G50400 35.244 349 210 11 6 344 10 352 5.19e-57 190
MsG0580028554.01.T01 AT3G43550 36.332 289 174 4 6 294 8 286 8.90e-57 187
MsG0580028554.01.T01 AT2G23540 34.551 356 213 10 5 347 20 368 1.67e-56 189
MsG0580028554.01.T01 AT1G29660 34.969 326 200 8 25 345 24 342 2.29e-55 186
MsG0580028554.01.T01 AT5G41890 34.731 334 187 9 35 347 33 356 1.38e-54 184
MsG0580028554.01.T01 AT1G75920 35.690 297 171 7 55 345 22 304 7.55e-54 180
MsG0580028554.01.T01 AT5G15720 34.591 318 197 7 33 344 30 342 2.32e-53 180
MsG0580028554.01.T01 AT1G71250 31.153 321 214 6 28 345 36 352 3.41e-53 180
MsG0580028554.01.T01 AT1G53920 33.144 353 215 11 7 347 18 361 3.92e-53 180
MsG0580028554.01.T01 AT1G29670 33.236 343 213 9 8 345 10 341 8.35e-53 179
MsG0580028554.01.T01 AT5G45670 32.565 347 218 9 4 345 5 340 2.76e-52 177
MsG0580028554.01.T01 AT1G29670 34.154 325 201 8 26 345 93 409 5.84e-52 178
MsG0580028554.01.T01 AT1G74460 31.818 330 210 8 35 359 25 344 2.50e-51 175
MsG0580028554.01.T01 AT1G75920 34.483 319 157 9 33 345 29 301 1.41e-50 172
MsG0580028554.01.T01 AT4G18970 33.228 316 200 8 35 345 30 339 5.94e-50 171
MsG0580028554.01.T01 AT5G33370 36.226 265 162 5 33 294 30 290 7.53e-50 170
MsG0580028554.01.T01 AT4G18970 33.228 316 200 8 35 345 30 339 1.48e-49 172
MsG0580028554.01.T01 AT5G37690 29.206 315 214 6 36 347 30 338 4.18e-49 169
MsG0580028554.01.T01 AT5G55050 35.061 328 192 10 30 343 33 353 3.40e-48 167
MsG0580028554.01.T01 AT1G33811 32.927 328 204 10 28 345 29 350 1.33e-47 166
MsG0580028554.01.T01 AT5G40990 30.899 356 225 7 4 347 8 354 2.07e-46 162
MsG0580028554.01.T01 AT2G19060 32.915 319 187 11 35 345 32 331 8.31e-46 160
MsG0580028554.01.T01 AT5G37690 29.114 316 205 7 36 347 30 330 8.37e-46 160
MsG0580028554.01.T01 AT1G71691 33.856 319 198 10 31 345 53 362 1.43e-45 160
MsG0580028554.01.T01 AT1G53990 31.638 354 216 10 5 347 7 345 6.42e-44 155
MsG0580028554.01.T01 AT3G14225 30.145 345 222 8 15 347 21 358 6.55e-44 156
MsG0580028554.01.T01 AT2G19010 35.423 319 177 12 35 345 32 329 8.11e-44 155
MsG0580028554.01.T01 AT2G19010 35.423 319 177 12 35 345 62 359 1.35e-43 155
MsG0580028554.01.T01 AT3G14225 30.499 341 222 8 15 347 21 354 1.67e-43 155
MsG0580028554.01.T01 AT2G19050 31.902 326 195 11 27 345 25 330 1.21e-41 149
MsG0580028554.01.T01 AT1G53940 31.319 364 212 11 7 347 8 356 3.35e-39 143
MsG0580028554.01.T01 AT1G28580 32.055 365 213 16 5 347 12 363 3.04e-38 141
MsG0580028554.01.T01 AT1G71120 28.963 328 211 9 26 345 24 337 3.30e-38 140
MsG0580028554.01.T01 AT1G28650 31.579 361 216 15 5 345 12 361 6.50e-38 140
MsG0580028554.01.T01 AT5G15720 33.209 268 168 7 33 294 30 292 2.19e-36 134
MsG0580028554.01.T01 AT4G16230 37.379 206 122 4 30 231 27 229 8.71e-36 131
MsG0580028554.01.T01 AT1G28640 29.558 362 222 15 7 347 12 361 1.37e-35 134
MsG0580028554.01.T01 AT1G28610 32.059 340 190 15 31 344 29 353 1.54e-35 134
MsG0580028554.01.T01 AT4G30140 32.698 315 189 12 35 345 35 330 2.73e-35 132
MsG0580028554.01.T01 AT5G15720 30.469 256 171 4 95 344 57 311 7.33e-34 128
MsG0580028554.01.T01 AT1G28600 31.356 354 204 15 33 361 31 370 2.60e-33 128
MsG0580028554.01.T01 AT3G48460 28.969 359 217 14 5 344 18 357 4.61e-33 127
MsG0580028554.01.T01 AT1G28660 28.767 365 221 15 7 347 12 361 9.44e-33 126
MsG0580028554.01.T01 AT2G03980 30.435 345 210 16 16 344 21 351 1.00e-32 125
MsG0580028554.01.T01 AT2G03980 30.435 345 210 16 16 344 21 351 1.00e-32 125
MsG0580028554.01.T01 AT2G03980 30.435 345 210 16 16 344 21 351 1.00e-32 125
MsG0580028554.01.T01 AT2G03980 30.435 345 210 16 16 344 21 351 1.00e-32 125
MsG0580028554.01.T01 AT1G31550 29.121 364 223 15 1 344 10 358 6.86e-32 124
MsG0580028554.01.T01 AT1G28670 29.558 362 223 14 7 347 12 362 7.86e-32 124
MsG0580028554.01.T01 AT1G28570 29.919 371 220 15 1 347 6 360 9.13e-32 124
MsG0580028554.01.T01 AT4G01130 29.577 355 196 12 28 347 29 364 9.80e-32 123
MsG0580028554.01.T01 AT1G28660 28.767 365 220 16 7 347 12 360 2.16e-31 122
MsG0580028554.01.T01 AT2G27360 30.240 334 204 13 33 345 33 358 3.22e-31 122
MsG0580028554.01.T01 AT1G71691 33.209 268 166 10 31 294 53 311 5.56e-31 120
MsG0580028554.01.T01 AT3G26430 29.839 372 208 14 9 347 11 362 2.19e-30 119
MsG0580028554.01.T01 AT1G56670 29.745 353 203 14 34 362 41 372 2.96e-30 119
MsG0580028554.01.T01 AT1G09390 30.058 346 209 14 34 361 38 368 1.02e-29 117
MsG0580028554.01.T01 AT5G03610 27.273 352 217 12 5 337 7 338 1.42e-29 117
MsG0580028554.01.T01 AT1G71691 30.894 246 162 6 104 345 20 261 2.19e-29 115
MsG0580028554.01.T01 AT3G05180 27.654 358 222 11 15 347 20 365 4.00e-29 116
MsG0580028554.01.T01 AT2G19050 31.008 258 161 8 27 280 25 269 6.10e-29 114
MsG0580028554.01.T01 AT3G14220 27.778 324 196 12 34 344 33 331 7.14e-29 115
MsG0580028554.01.T01 AT5G14450 28.267 375 220 14 1 344 11 367 9.34e-29 115
MsG0580028554.01.T01 AT1G28590 29.143 350 214 15 19 345 22 360 1.25e-28 115
MsG0580028554.01.T01 AT1G53940 32.166 314 175 12 8 303 9 302 3.31e-28 112
MsG0580028554.01.T01 AT5G45910 28.338 367 222 15 8 344 3 358 6.05e-28 113
MsG0580028554.01.T01 AT1G54790 27.907 344 211 12 30 347 29 361 7.08e-28 113
MsG0580028554.01.T01 AT1G31550 28.099 363 225 15 1 344 10 355 9.55e-28 112
MsG0580028554.01.T01 AT3G09930 27.103 321 204 11 28 337 34 335 1.45e-27 111
MsG0580028554.01.T01 AT3G09930 27.103 321 204 11 28 337 34 335 1.45e-27 111
MsG0580028554.01.T01 AT2G04020 35.849 212 117 10 33 237 43 242 7.91e-27 107
MsG0580028554.01.T01 AT2G04020 34.434 212 121 9 33 237 43 243 2.82e-26 107
MsG0580028554.01.T01 AT1G54000 27.066 351 221 12 5 347 15 338 7.74e-26 107
MsG0580028554.01.T01 AT1G54010 28.344 314 193 11 34 337 37 328 7.87e-26 107
MsG0580028554.01.T01 AT1G54020 26.332 319 208 8 34 347 34 330 4.71e-25 105
MsG0580028554.01.T01 AT4G01130 30.400 250 144 7 119 347 38 278 1.20e-24 102
MsG0580028554.01.T01 AT3G62280 27.778 342 190 14 34 347 37 349 2.13e-24 103
MsG0580028554.01.T01 AT1G54790 26.273 373 224 14 6 347 8 360 1.14e-23 101
MsG0580028554.01.T01 AT3G27950 25.203 369 234 12 1 347 6 354 5.46e-23 99.4
MsG0580028554.01.T01 AT1G54030 25.723 311 203 9 33 340 52 337 2.09e-22 98.2
MsG0580028554.01.T01 AT1G67830 26.989 352 202 13 28 343 25 357 5.81e-22 96.3
MsG0580028554.01.T01 AT1G28580 29.577 284 171 13 84 347 8 282 2.00e-21 94.0
MsG0580028554.01.T01 AT5G03600 27.134 328 210 11 16 337 32 336 2.38e-21 94.4
MsG0580028554.01.T01 AT4G01130 29.412 289 163 10 28 294 29 298 4.26e-21 93.2
MsG0580028554.01.T01 AT5G03600 26.829 328 211 11 22 343 3 307 9.29e-21 92.0
MsG0580028554.01.T01 AT3G14210 28.614 332 187 15 33 344 36 337 1.53e-20 92.4
MsG0580028554.01.T01 AT1G54790 25.500 400 219 17 6 347 8 386 7.03e-19 87.8
MsG0580028554.01.T01 AT1G56670 29.856 278 157 10 34 294 41 297 1.04e-18 85.9
MsG0580028554.01.T01 AT2G36325 26.100 341 211 16 30 357 44 356 4.32e-18 85.1
MsG0580028554.01.T01 AT4G16220 45.349 86 44 2 35 120 32 114 3.69e-15 74.7
MsG0580028554.01.T01 AT1G54030 26.446 242 152 7 33 271 52 270 1.60e-14 73.9
MsG0580028554.01.T01 AT3G62280 28.148 270 142 12 34 280 37 277 2.24e-14 73.2
MsG0580028554.01.T01 AT4G16233 37.383 107 64 2 241 345 4 109 2.80e-14 69.7
MsG0580028554.01.T01 AT5G03980 23.161 367 213 13 5 359 13 322 8.66e-14 72.0
MsG0580028554.01.T01 AT1G28610 34.545 165 84 9 30 180 28 182 1.27e-13 70.5
MsG0580028554.01.T01 AT1G28570 26.570 207 131 7 156 347 88 288 1.32e-12 68.2
MsG0580028554.01.T01 AT1G28570 27.228 202 126 7 161 347 2 197 2.34e-12 66.2
MsG0580028554.01.T01 AT1G54020 26.042 192 131 4 161 347 10 195 9.30e-11 62.0

Find 57 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGCTTCAAAATATGTATTT+TGG 0.097246 5:-82191638 MsG0580028554.01.T01:CDS
ATTTACAATTCCTGTGAAAT+TGG 0.160122 5:+82191541 None:intergenic
AAGGGAAATCATTTACCTTA+TGG 0.222399 5:-82194537 MsG0580028554.01.T01:CDS
AGAAACCATCCCTCCTTTCT+TGG 0.234328 5:-82194427 MsG0580028554.01.T01:CDS
CAATTACAAGCAATTATTTC+AGG 0.267672 5:-82193447 MsG0580028554.01.T01:CDS
TAGATTCTCTAATGGAAAAT+TGG 0.269668 5:-82194484 MsG0580028554.01.T01:CDS
GTGGCTGGGCTTCCTCCTAT+TGG 0.306172 5:-82193582 MsG0580028554.01.T01:CDS
AGCTTTGCATCTGGAGGATC+TGG 0.329846 5:-82194366 MsG0580028554.01.T01:CDS
TTTCAAAGATTATGTGGATA+AGG 0.351799 5:-82194283 MsG0580028554.01.T01:CDS
GTATTTAGCAATATACTTGT+TGG 0.359467 5:+82191590 None:intergenic
GTCTACTTTGAACAAAATCT+TGG 0.366064 5:+82194121 None:intergenic
AACTTGGCTGTTATTTGAAT+AGG 0.376319 5:+82193552 None:intergenic
TGCAGAAAATTTGCTGTGGC+TGG 0.377082 5:-82193597 MsG0580028554.01.T01:CDS
GATAAGGTTAAAAGCATTGT+AGG 0.384357 5:-82194267 MsG0580028554.01.T01:CDS
TGACATTCCAACTAGAAGAT+TGG 0.386161 5:-82194163 MsG0580028554.01.T01:CDS
TATTGCTAAATACATAGAAT+TGG 0.401057 5:-82191580 MsG0580028554.01.T01:CDS
GGAAGAGAATTTAGAGGCTA+AGG 0.403545 5:-82193502 MsG0580028554.01.T01:CDS
AAGGAGGGATGGTTTCTTTG+AGG 0.411318 5:+82194433 None:intergenic
ACAAAGAGTTGGAAATGCTT+TGG 0.414001 5:-82194229 MsG0580028554.01.T01:CDS
AACATATATGACCCCTTGAT+TGG 0.416640 5:-82193405 MsG0580028554.01.T01:CDS
TGAATATTTCAAAGATTATG+TGG 0.419935 5:-82194289 MsG0580028554.01.T01:CDS
AACAAAGGATGTTGTGGAAC+TGG 0.421733 5:-82191711 MsG0580028554.01.T01:CDS
CTACCAGTAGGTACATGATT+AGG 0.426812 5:+82194504 None:intergenic
AGATTGGAGTTCAACATTAG+TGG 0.428216 5:-82194147 MsG0580028554.01.T01:CDS
TTGAACTCCAATCTTCTAGT+TGG 0.428834 5:+82194156 None:intergenic
TACTTGTTGGTTGCTTCACT+TGG 0.432363 5:+82191603 None:intergenic
TGTGAAGGAAGAGAATTTAG+AGG 0.433278 5:-82193508 MsG0580028554.01.T01:CDS
TCAAATGAAGAGCTTCTAAC+TGG 0.435781 5:-82194393 MsG0580028554.01.T01:CDS
ACTGGTGTTAGCTTTGCATC+TGG 0.440820 5:-82194375 MsG0580028554.01.T01:CDS
CCTACTGGTAGATTCTCTAA+TGG 0.455682 5:-82194492 MsG0580028554.01.T01:CDS
ATTCCTGTGAAATTGGAACT+TGG 0.457316 5:+82191548 None:intergenic
TGAATAGGTATGCAACCAAT+AGG 0.467106 5:+82193567 None:intergenic
TACCCAAGTTCCAATTTCAC+AGG 0.488485 5:-82191551 MsG0580028554.01.T01:CDS
TTTCCTAATCATGTACCTAC+TGG 0.490307 5:-82194507 MsG0580028554.01.T01:CDS
GCAGAAAATTTGCTGTGGCT+GGG 0.490709 5:-82193596 MsG0580028554.01.T01:CDS
TTTGAAGCGTCATCACATAC+AGG 0.490836 5:+82191651 None:intergenic
GTGTTTGATAAGGCCAATCA+AGG 0.492502 5:+82193392 None:intergenic
GCTTTGGTGATTATTAGTGC+TGG 0.503803 5:-82194213 MsG0580028554.01.T01:CDS
AAAGAAGCTAAACAAAGAGT+TGG 0.506664 5:-82194240 MsG0580028554.01.T01:CDS
ATAAGGTTAAAAGCATTGTA+GGG 0.513100 5:-82194266 MsG0580028554.01.T01:CDS
TTCCTGTGAAATTGGAACTT+GGG 0.516173 5:+82191549 None:intergenic
GTCATTGCTTGAAGCAACAT+TGG 0.522506 5:+82194653 None:intergenic
GAAACAAACAAAGGATGTTG+TGG 0.546639 5:-82191717 MsG0580028554.01.T01:CDS
CCATTAGAGAATCTACCAGT+AGG 0.562970 5:+82194492 None:intergenic
TTGATCCAAGAAAGGAGGGA+TGG 0.570649 5:+82194422 None:intergenic
TTGTAGGAACTGTACGAGCT+CGG 0.576828 5:-82193621 MsG0580028554.01.T01:intron
TGTTTGATAAGGCCAATCAA+GGG 0.589287 5:+82193393 None:intergenic
GGGGATTCTACGGTTGACAC+AGG 0.605298 5:-82194591 MsG0580028554.01.T01:CDS
GGTGTTAGCTTTGCATCTGG+AGG 0.607335 5:-82194372 MsG0580028554.01.T01:CDS
GCTTGAAGCAACATTGGCAA+TGG 0.626046 5:+82194659 None:intergenic
AGATCGTTATAAATGTGTGA+AGG 0.626968 5:-82193523 MsG0580028554.01.T01:CDS
ATAGGTATGCAACCAATAGG+AGG 0.633460 5:+82193570 None:intergenic
TAAGGTTAAAAGCATTGTAG+GGG 0.636849 5:-82194265 MsG0580028554.01.T01:CDS
CGGATGCAGAAAATTTGCTG+TGG 0.662430 5:-82193601 MsG0580028554.01.T01:CDS
GTTTGATAAGGCCAATCAAG+GGG 0.665387 5:+82193394 None:intergenic
GGTTTCAAGGAAACAAACAA+AGG 0.717933 5:-82191726 MsG0580028554.01.T01:CDS
GGTGTGAGTTCATTACACAA+TGG 0.719328 5:+82191672 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTCATTAATTATAAAAAAAA+TGG - Chr5:82192475-82192494 MsG0580028554.01.T01:intron 10.0%
!! TAAATTTCTTAAAAAATTGT+AGG - Chr5:82192595-82192614 MsG0580028554.01.T01:intron 10.0%
!!! ACTCTTTTTTTAAAAAAAAA+TGG + Chr5:82193965-82193984 None:intergenic 10.0%
!!! ATTAGAATTATTTTCTTTTT+TGG - Chr5:82192160-82192179 MsG0580028554.01.T01:intron 10.0%
!!! TGAACTTTATATTTATTTTT+TGG + Chr5:82193731-82193712 None:intergenic 10.0%
!! AATGCATAAATAAATACTAT+AGG + Chr5:82194466-82194485 None:intergenic 15.0%
!! ATCAAAAAAACATTGATAAA+GGG - Chr5:82191677-82191696 MsG0580028554.01.T01:CDS 15.0%
!!! ATAAAAATTTGTTCTACTAT+TGG + Chr5:82192256-82192275 None:intergenic 15.0%
!!! ATACATTTTTTTTATTCTCA+CGG - Chr5:82192437-82192456 MsG0580028554.01.T01:intron 15.0%
!!! TCTATTTTTTTTCAAAAACA+AGG + Chr5:82194010-82194029 None:intergenic 15.0%
!!! TTTTTTTTTTGACAAGTAAT+GGG - Chr5:82193390-82193409 MsG0580028554.01.T01:CDS 15.0%
!!! TTTTTTTTTTTGACAAGTAA+TGG - Chr5:82193389-82193408 MsG0580028554.01.T01:CDS 15.0%
!! AAGGAATAATGAAATGAAAA+AGG - Chr5:82193806-82193825 MsG0580028554.01.T01:intron 20.0%
!! CAACAGAGATAAAATTTAAT+GGG - Chr5:82193360-82193379 MsG0580028554.01.T01:intron 20.0%
!! CAATCATATATATTTCATCA+AGG - Chr5:82192285-82192304 MsG0580028554.01.T01:intron 20.0%
!! CATACATTCAACAAAAAAAT+TGG - Chr5:82192383-82192402 MsG0580028554.01.T01:intron 20.0%
!! CATCAAAAAAACATTGATAA+AGG - Chr5:82191676-82191695 MsG0580028554.01.T01:CDS 20.0%
!! TAAAATATGATTATCTACTG+TGG - Chr5:82193631-82193650 MsG0580028554.01.T01:intron 20.0%
!! TAACAGAAAAAATGAAGTTA+AGG - Chr5:82193748-82193767 MsG0580028554.01.T01:intron 20.0%
!! TATTGCTAAATACATAGAAT+TGG - Chr5:82194652-82194671 MsG0580028554.01.T01:CDS 20.0%
!! TGAATATTTCAAAGATTATG+TGG - Chr5:82191943-82191962 MsG0580028554.01.T01:intron 20.0%
!! TTGACAAATTGAACATAAAA+GGG + Chr5:82192915-82192934 None:intergenic 20.0%
!! TTTGACAAATTGAACATAAA+AGG + Chr5:82192916-82192935 None:intergenic 20.0%
!!! AAAAAAATCTGAAACAAATG+GGG - Chr5:82194172-82194191 MsG0580028554.01.T01:CDS 20.0%
!!! ATTTTTTTTCAAAAACAAGG+AGG + Chr5:82194007-82194026 None:intergenic 20.0%
!!! GAAAAAAATCTGAAACAAAT+GGG - Chr5:82194171-82194190 MsG0580028554.01.T01:CDS 20.0%
!!! TAAGTAACTTTTTTCTAATG+TGG - Chr5:82192975-82192994 MsG0580028554.01.T01:intron 20.0%
!!! TAGACTTCAAATTTTCATTA+AGG - Chr5:82192129-82192148 MsG0580028554.01.T01:intron 20.0%
!!! TCATTTTTAAGTGTTTGTTT+AGG + Chr5:82194114-82194133 None:intergenic 20.0%
!!! TGAAAAAAATCTGAAACAAA+TGG - Chr5:82194170-82194189 MsG0580028554.01.T01:CDS 20.0%
!!! TTCACCTTTAAAATTTTGAA+GGG + Chr5:82194432-82194451 None:intergenic 20.0%
!!! TTTTCATTACCAAGAAATAT+AGG + Chr5:82194198-82194217 None:intergenic 20.0%
! AAAAAATGAAGTTAAGGCTT+TGG - Chr5:82193754-82193773 MsG0580028554.01.T01:intron 25.0%
! AATGTCAAGAGAAAATACAA+CGG + Chr5:82193306-82193325 None:intergenic 25.0%
! ACATCTATCTTAGAAATAGA+GGG + Chr5:82193231-82193250 None:intergenic 25.0%
! AGAAAACTATCTCTCAAATA+AGG - Chr5:82194344-82194363 MsG0580028554.01.T01:CDS 25.0%
! ATTTACAATTCCTGTGAAAT+TGG + Chr5:82194694-82194713 None:intergenic 25.0%
! CAATTACAAGCAATTATTTC+AGG - Chr5:82192785-82192804 MsG0580028554.01.T01:intron 25.0%
! CCAACAGAGATAAAATTTAA+TGG - Chr5:82193359-82193378 MsG0580028554.01.T01:intron 25.0%
! GTATTTAGCAATATACTTGT+TGG + Chr5:82194645-82194664 None:intergenic 25.0%
! TAAGGATTACAACCAAAAAT+TGG - Chr5:82192748-82192767 MsG0580028554.01.T01:intron 25.0%
! TACATCTATCTTAGAAATAG+AGG + Chr5:82193232-82193251 None:intergenic 25.0%
! TACTATCAGACACTAAATAT+AGG + Chr5:82193609-82193628 None:intergenic 25.0%
! TAGATTCTCTAATGGAAAAT+TGG - Chr5:82191748-82191767 MsG0580028554.01.T01:intron 25.0%
! TCTTGACATTGAATTGATAA+TGG - Chr5:82193316-82193335 MsG0580028554.01.T01:intron 25.0%
! TTTCAAAGATTATGTGGATA+AGG - Chr5:82191949-82191968 MsG0580028554.01.T01:intron 25.0%
!! AAAATTTGTTCTACTATTGG+TGG + Chr5:82192253-82192272 None:intergenic 25.0%
!! ACGCTTCAAAATATGTATTT+TGG - Chr5:82194594-82194613 MsG0580028554.01.T01:CDS 25.0%
!! AGAGAAAAGAGAGAAATTTT+CGG + Chr5:82194370-82194389 None:intergenic 25.0%
!! ATAACGATCTTTTACAAACT+TGG + Chr5:82192699-82192718 None:intergenic 25.0%
!! CCATTAAATTTTATCTCTGT+TGG + Chr5:82193362-82193381 None:intergenic 25.0%
!! CCTAATAGCTTTTCATTTTA+GGG - Chr5:82194047-82194066 MsG0580028554.01.T01:intron 25.0%
!! CGCTTCAAAATATGTATTTT+GGG - Chr5:82194595-82194614 MsG0580028554.01.T01:CDS 25.0%
!! CTTTCCCTTCAAAATTTTAA+AGG - Chr5:82194425-82194444 MsG0580028554.01.T01:CDS 25.0%
!! CTTTTATTATACAGGTTTCA+AGG - Chr5:82194493-82194512 MsG0580028554.01.T01:CDS 25.0%
!! TCCTAATAGCTTTTCATTTT+AGG - Chr5:82194046-82194065 MsG0580028554.01.T01:intron 25.0%
!! TCTTGTGACTTTTATTATAC+AGG - Chr5:82194485-82194504 MsG0580028554.01.T01:CDS 25.0%
!! TGGTAATGCTAAAGAAAAAT+TGG - Chr5:82193336-82193355 MsG0580028554.01.T01:intron 25.0%
!! TTAGGAAAATCTTTTCCATA+AGG + Chr5:82191713-82191732 None:intergenic 25.0%
!!! AAATTTTGAAGGGAAAGAAA+AGG + Chr5:82194422-82194441 None:intergenic 25.0%
!!! AATGGATTTTTATGCATTGT+AGG + Chr5:82193947-82193966 None:intergenic 25.0%
!!! AATTTTGAAGGGAAAGAAAA+GGG + Chr5:82194421-82194440 None:intergenic 25.0%
!!! AGAATGAAGCTTTAAGAATA+AGG - Chr5:82193787-82193806 MsG0580028554.01.T01:intron 25.0%
!!! ATAAGGTTAAAAGCATTGTA+GGG - Chr5:82191966-82191985 MsG0580028554.01.T01:intron 25.0%
!!! GATTTTACAATAGCTTTAAC+TGG - Chr5:82191896-82191915 MsG0580028554.01.T01:intron 25.0%
!!! GTTCACCTTTAAAATTTTGA+AGG + Chr5:82194433-82194452 None:intergenic 25.0%
!!! TGTCATCCATTTTAGTTTTT+GGG - Chr5:82191621-82191640 MsG0580028554.01.T01:CDS 25.0%
!!! TTGTCATCCATTTTAGTTTT+TGG - Chr5:82191620-82191639 MsG0580028554.01.T01:CDS 25.0%
AAAAGGGAAAGGAAATACTT+TGG + Chr5:82194405-82194424 None:intergenic 30.0%
AAAGAAGCTAAACAAAGAGT+TGG - Chr5:82191992-82192011 MsG0580028554.01.T01:intron 30.0%
AAGGGAAATCATTTACCTTA+TGG - Chr5:82191695-82191714 MsG0580028554.01.T01:CDS 30.0%
AGAATCCCCAAAAACTAAAA+TGG + Chr5:82191630-82191649 None:intergenic 30.0%
AGATCGTTATAAATGTGTGA+AGG - Chr5:82192709-82192728 MsG0580028554.01.T01:intron 30.0%
ATCAAACACCCTGAAAAATA+TGG - Chr5:82192854-82192873 MsG0580028554.01.T01:intron 30.0%
ATGAAATGAAAAAGGAAGCA+AGG - Chr5:82193814-82193833 MsG0580028554.01.T01:intron 30.0%
CCCTAAAATGAAAAGCTATT+AGG + Chr5:82194050-82194069 None:intergenic 30.0%
GTCTACTTTGAACAAAATCT+TGG + Chr5:82192114-82192133 None:intergenic 30.0%
TGAAATGAAAAAGGAAGCAA+GGG - Chr5:82193815-82193834 MsG0580028554.01.T01:intron 30.0%
TTGATTGATATAGCATAGCT+TGG + Chr5:82192947-82192966 None:intergenic 30.0%
! AACTTGGCTGTTATTTGAAT+AGG + Chr5:82192683-82192702 None:intergenic 30.0%
!! CATTTTGACCATCTCTATTT+CGG - Chr5:82193018-82193037 MsG0580028554.01.T01:intron 30.0%
!! GATAAGGTTAAAAGCATTGT+AGG - Chr5:82191965-82191984 MsG0580028554.01.T01:intron 30.0%
!! GATAGATTTTGATCCAAGAA+AGG + Chr5:82191821-82191840 None:intergenic 30.0%
!! TAAGGTTAAAAGCATTGTAG+GGG - Chr5:82191967-82191986 MsG0580028554.01.T01:intron 30.0%
!!! AGAGATAGTTTTCTAGAGTA+TGG + Chr5:82194338-82194357 None:intergenic 30.0%
!!! ATTTTTCAGGGTGTTTGATA+AGG + Chr5:82192853-82192872 None:intergenic 30.0%
!!! GTCATCCATTTTAGTTTTTG+GGG - Chr5:82191622-82191641 MsG0580028554.01.T01:CDS 30.0%
!!! TTTAGTTTTTGGGGATTCTA+CGG - Chr5:82191631-82191650 MsG0580028554.01.T01:CDS 30.0%
AACATATATGACCCCTTGAT+TGG - Chr5:82192827-82192846 MsG0580028554.01.T01:intron 35.0%
AACTTGAAAGGGAAGGTTAT+GGG - Chr5:82193847-82193866 MsG0580028554.01.T01:intron 35.0%
ACAAAGAGTTGGAAATGCTT+TGG - Chr5:82192003-82192022 MsG0580028554.01.T01:intron 35.0%
AGATTGGAGTTCAACATTAG+TGG - Chr5:82192085-82192104 MsG0580028554.01.T01:intron 35.0%
ATCCTATTCCGAAATAGAGA+TGG + Chr5:82193029-82193048 None:intergenic 35.0%
ATTCCTGTGAAATTGGAACT+TGG + Chr5:82194687-82194706 None:intergenic 35.0%
CAAAAAGATAAAGCTCAACC+AGG - Chr5:82193534-82193553 MsG0580028554.01.T01:CDS 35.0%
CGAAATAGAGATGGTCAAAA+TGG + Chr5:82193020-82193039 None:intergenic 35.0%
CTACTGTGGAAAGAACTTAT+AGG - Chr5:82193645-82193664 MsG0580028554.01.T01:intron 35.0%
GAAACAAACAAAGGATGTTG+TGG - Chr5:82194515-82194534 MsG0580028554.01.T01:CDS 35.0%
GGTTTCAAGGAAACAAACAA+AGG - Chr5:82194506-82194525 MsG0580028554.01.T01:CDS 35.0%
TCAAATGAAGAGCTTCTAAC+TGG - Chr5:82191839-82191858 MsG0580028554.01.T01:intron 35.0%
TGAATAGGTATGCAACCAAT+AGG + Chr5:82192668-82192687 None:intergenic 35.0%
TGACATTCCAACTAGAAGAT+TGG - Chr5:82192069-82192088 MsG0580028554.01.T01:intron 35.0%
TGTGAAGGAAGAGAATTTAG+AGG - Chr5:82192724-82192743 MsG0580028554.01.T01:intron 35.0%
TGTTTGATAAGGCCAATCAA+GGG + Chr5:82192842-82192861 None:intergenic 35.0%
TTCCTGTGAAATTGGAACTT+GGG + Chr5:82194686-82194705 None:intergenic 35.0%
TTGAACTCCAATCTTCTAGT+TGG + Chr5:82192079-82192098 None:intergenic 35.0%
TTTCCTAATCATGTACCTAC+TGG - Chr5:82191725-82191744 MsG0580028554.01.T01:CDS 35.0%
! ACAAGTAATGGGAGAGTTAA+TGG - Chr5:82193401-82193420 MsG0580028554.01.T01:CDS 35.0%
! CAAGTAATGGGAGAGTTAAT+GGG - Chr5:82193402-82193421 MsG0580028554.01.T01:CDS 35.0%
! GCAACTCACCATATTTTTCA+GGG + Chr5:82192865-82192884 None:intergenic 35.0%
! TGCAACTCACCATATTTTTC+AGG + Chr5:82192866-82192885 None:intergenic 35.0%
!! AGATTTTGATCCAAGAAAGG+AGG + Chr5:82191818-82191837 None:intergenic 35.0%
!! GATTTTGATCCAAGAAAGGA+GGG + Chr5:82191817-82191836 None:intergenic 35.0%
!! GGTTGAGCTTTATCTTTTTG+TGG + Chr5:82193534-82193553 None:intergenic 35.0%
AACAAAGGATGTTGTGGAAC+TGG - Chr5:82194521-82194540 MsG0580028554.01.T01:CDS 40.0%
AGGATTGAGTCTACTAGAAG+AGG - Chr5:82193554-82193573 MsG0580028554.01.T01:CDS 40.0%
AGGGAAAGGAAATACTTTGG+AGG + Chr5:82194402-82194421 None:intergenic 40.0%
ATAGGTATGCAACCAATAGG+AGG + Chr5:82192665-82192684 None:intergenic 40.0%
ATCTTAGAAATAGAGGGACC+AGG + Chr5:82193225-82193244 None:intergenic 40.0%
CAAATGGGGCCTATATTTCT+TGG - Chr5:82194186-82194205 MsG0580028554.01.T01:CDS 40.0%
CAACTTGAAAGGGAAGGTTA+TGG - Chr5:82193846-82193865 MsG0580028554.01.T01:intron 40.0%
CCATTAGAGAATCTACCAGT+AGG + Chr5:82191743-82191762 None:intergenic 40.0%
CCTACTGGTAGATTCTCTAA+TGG - Chr5:82191740-82191759 MsG0580028554.01.T01:intron 40.0%
CTACCAGTAGGTACATGATT+AGG + Chr5:82191731-82191750 None:intergenic 40.0%
GACCATCTCTATTTCGGAAT+AGG - Chr5:82193024-82193043 MsG0580028554.01.T01:intron 40.0%
GCCATTCATCTTAGATCGAA+CGG + Chr5:82193153-82193172 None:intergenic 40.0%
GGAAGAGAATTTAGAGGCTA+AGG - Chr5:82192730-82192749 MsG0580028554.01.T01:intron 40.0%
GGATAGTCCTCAACTTGAAA+GGG - Chr5:82193836-82193855 MsG0580028554.01.T01:intron 40.0%
GGGAAAGGAAATACTTTGGA+GGG + Chr5:82194401-82194420 None:intergenic 40.0%
GGTGTGAGTTCATTACACAA+TGG + Chr5:82194563-82194582 None:intergenic 40.0%
GTCATTGCTTGAAGCAACAT+TGG + Chr5:82191582-82191601 None:intergenic 40.0%
GTGTTTGATAAGGCCAATCA+AGG + Chr5:82192843-82192862 None:intergenic 40.0%
GTTTGATAAGGCCAATCAAG+GGG + Chr5:82192841-82192860 None:intergenic 40.0%
TACCCAAGTTCCAATTTCAC+AGG - Chr5:82194681-82194700 MsG0580028554.01.T01:CDS 40.0%
TCTTCTAGTAGACTCAATCC+TGG + Chr5:82193555-82193574 None:intergenic 40.0%
TGAAGGGAAAGAAAAGGGAA+AGG + Chr5:82194416-82194435 None:intergenic 40.0%
! ACCGTTCGATCTAAGATGAA+TGG - Chr5:82193149-82193168 MsG0580028554.01.T01:intron 40.0%
! AGTCTTATAGCGTGCAAATG+AGG - Chr5:82193581-82193600 MsG0580028554.01.T01:CDS 40.0%
! ATGAAGTTAAGGCTTTGGCT+CGG - Chr5:82193759-82193778 MsG0580028554.01.T01:intron 40.0%
! GCTTTGGTGATTATTAGTGC+TGG - Chr5:82192019-82192038 MsG0580028554.01.T01:intron 40.0%
! GTAAACGTCGTGCCAATTTT+TGG + Chr5:82192763-82192782 None:intergenic 40.0%
! TACTTGTTGGTTGCTTCACT+TGG + Chr5:82194632-82194651 None:intergenic 40.0%
! TTTGAAGCGTCATCACATAC+AGG + Chr5:82194584-82194603 None:intergenic 40.0%
!! TAACCTTCCCTTTCAAGTTG+AGG + Chr5:82193846-82193865 None:intergenic 40.0%
AAGGAGGGATGGTTTCTTTG+AGG + Chr5:82191802-82191821 None:intergenic 45.0%
AGAAACCATCCCTCCTTTCT+TGG - Chr5:82191805-82191824 MsG0580028554.01.T01:intron 45.0%
AGTCCTCAACTTGAAAGGGA+AGG - Chr5:82193840-82193859 MsG0580028554.01.T01:intron 45.0%
ATGGTCAAAATGGCTGCTAG+TGG + Chr5:82193010-82193029 None:intergenic 45.0%
CCTCTGCCATCCAACTTAAT+CGG + Chr5:82193094-82193113 None:intergenic 45.0%
GCTTGAAGCAACATTGGCAA+TGG + Chr5:82191576-82191595 None:intergenic 45.0%
GGGATAGTCCTCAACTTGAA+AGG - Chr5:82193835-82193854 MsG0580028554.01.T01:intron 45.0%
TGCCATCCAACTTAATCGGA+CGG + Chr5:82193090-82193109 None:intergenic 45.0%
TTGATCCAAGAAAGGAGGGA+TGG + Chr5:82191813-82191832 None:intergenic 45.0%
TTGTAGGAACTGTACGAGCT+CGG - Chr5:82192611-82192630 MsG0580028554.01.T01:intron 45.0%
! GTTTTTACAGCAGCAGAACC+TGG - Chr5:82193204-82193223 MsG0580028554.01.T01:intron 45.0%
!! ACTGGTGTTAGCTTTGCATC+TGG - Chr5:82191857-82191876 MsG0580028554.01.T01:intron 45.0%
!! CGGATGCAGAAAATTTGCTG+TGG - Chr5:82192631-82192650 MsG0580028554.01.T01:intron 45.0%
!! GCAGAAAATTTGCTGTGGCT+GGG - Chr5:82192636-82192655 MsG0580028554.01.T01:intron 45.0%
!! TGCAGAAAATTTGCTGTGGC+TGG - Chr5:82192635-82192654 MsG0580028554.01.T01:intron 45.0%
!! TAATTTATAGAATATTATAA+AGG + Chr5:82194287-82194306 None:intergenic 5.0%
!! TCATTAATTATAAAAAAAAT+GGG - Chr5:82192476-82192495 MsG0580028554.01.T01:intron 5.0%
!!! AAAAAAAATGTATTTTTTTA+GGG + Chr5:82192430-82192449 None:intergenic 5.0%
!!! TAAAAAAAATGTATTTTTTT+AGG + Chr5:82192431-82192450 None:intergenic 5.0%
AGCTTTGCATCTGGAGGATC+TGG - Chr5:82191866-82191885 MsG0580028554.01.T01:intron 50.0%
GATTCCCTGCTGTAACAGCA+GGG - Chr5:82193046-82193065 MsG0580028554.01.T01:intron 50.0%
TGACAGCCGTCCGATTAAGT+TGG - Chr5:82193081-82193100 MsG0580028554.01.T01:intron 50.0%
!! AGCCGTCCGATTAAGTTGGA+TGG - Chr5:82193085-82193104 MsG0580028554.01.T01:intron 50.0%
!! CCGATTAAGTTGGATGGCAG+AGG - Chr5:82193091-82193110 MsG0580028554.01.T01:intron 50.0%
!! GGTGTTAGCTTTGCATCTGG+AGG - Chr5:82191860-82191879 MsG0580028554.01.T01:intron 50.0%
AGCACCCTGCTGTTACAGCA+GGG + Chr5:82193053-82193072 None:intergenic 55.0%
GGATTCCCTGCTGTAACAGC+AGG - Chr5:82193045-82193064 MsG0580028554.01.T01:intron 55.0%
GGGGATTCTACGGTTGACAC+AGG - Chr5:82191641-82191660 MsG0580028554.01.T01:CDS 55.0%
CAGCACCCTGCTGTTACAGC+AGG + Chr5:82193054-82193073 None:intergenic 60.0%
GTGGCTGGGCTTCCTCCTAT+TGG - Chr5:82192650-82192669 MsG0580028554.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 82191530 82194724 82191530 ID=MsG0580028554.01;Name=MsG0580028554.01
Chr5 mRNA 82191530 82194724 82191530 ID=MsG0580028554.01.T01;Parent=MsG0580028554.01;Name=MsG0580028554.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|3|0|365
Chr5 exon 82194104 82194724 82194104 ID=MsG0580028554.01.T01:exon:18944;Parent=MsG0580028554.01.T01
Chr5 exon 82193379 82193637 82193379 ID=MsG0580028554.01.T01:exon:18943;Parent=MsG0580028554.01.T01
Chr5 exon 82191530 82191747 82191530 ID=MsG0580028554.01.T01:exon:18942;Parent=MsG0580028554.01.T01
Chr5 CDS 82194104 82194724 82194104 ID=MsG0580028554.01.T01:cds;Parent=MsG0580028554.01.T01
Chr5 CDS 82193379 82193637 82193379 ID=MsG0580028554.01.T01:cds;Parent=MsG0580028554.01.T01
Chr5 CDS 82191530 82191747 82191530 ID=MsG0580028554.01.T01:cds;Parent=MsG0580028554.01.T01
Gene Sequence

>MsG0580028554.01.T01

ATGGCTTATGCGATTCTCTTTATCATTTTAATGCACGTTTGCACCATTGCCAATGTTGCTTCAAGCAATGACTTGAAATTGAGAACAAAATTGTCATCCATTTTAGTTTTTGGGGATTCTACGGTTGACACAGGAAATAACAACTACATCAAAAAAACATTGATAAAGGGAAATCATTTACCTTATGGAAAAGATTTTCCTAATCATGTACCTACTGGTAGATTCTCTAATGGAAAATTGGCTATAGACTTTCTTGCATCAACATTAAACCTCAAAGAAACCATCCCTCCTTTCTTGGATCAAAATCTATCAAATGAAGAGCTTCTAACTGGTGTTAGCTTTGCATCTGGAGGATCTGGTTTTGATGATTTTACAATAGCTTTAACTGGTGCTATATCAATGTCTAAACAAGTTGAATATTTCAAAGATTATGTGGATAAGGTTAAAAGCATTGTAGGGGAAAAAGAAGCTAAACAAAGAGTTGGAAATGCTTTGGTGATTATTAGTGCTGGAACTAATGACTTTCTTTTCAATTTTTATGACATTCCAACTAGAAGATTGGAGTTCAACATTAGTGGATACCAAGATTTTGTTCAAAGTAGACTTCAAATTTTCATTAAGGAACTGTACGAGCTCGGATGCAGAAAATTTGCTGTGGCTGGGCTTCCTCCTATTGGTTGCATACCTATTCAAATAACAGCCAAGTTTGTAAAAGATCGTTATAAATGTGTGAAGGAAGAGAATTTAGAGGCTAAGGATTACAACCAAAAATTGGCACGACGTTTACTTCAATTACAAGCAATTATTTCAGGAAGCAGAGTTATTTATACAAACATATATGACCCCTTGATTGGCCTTATCAAACACCCTGAAAAATATGGTTTCAAGGAAACAAACAAAGGATGTTGTGGAACTGGCATATTTGAAGTAACTCCATTGTGTAATGAACTCACACCTGTATGTGATGACGCTTCAAAATATGTATTTTGGGACAGTGTGCATCCAAGTGAAGCAACCAACAAGTATATTGCTAAATACATAGAATTGGAAGTTCTACCCAAGTTCCAATTTCACAGGAATTGTAAATTTGAAGTCTAG

Protein sequence

>MsG0580028554.01.T01

MAYAILFIILMHVCTIANVASSNDLKLRTKLSSILVFGDSTVDTGNNNYIKKTLIKGNHLPYGKDFPNHVPTGRFSNGKLAIDFLASTLNLKETIPPFLDQNLSNEELLTGVSFASGGSGFDDFTIALTGAISMSKQVEYFKDYVDKVKSIVGEKEAKQRVGNALVIISAGTNDFLFNFYDIPTRRLEFNISGYQDFVQSRLQIFIKELYELGCRKFAVAGLPPIGCIPIQITAKFVKDRYKCVKEENLEAKDYNQKLARRLLQLQAIISGSRVIYTNIYDPLIGLIKHPEKYGFKETNKGCCGTGIFEVTPLCNELTPVCDDASKYVFWDSVHPSEATNKYIAKYIELEVLPKFQFHRNCKFEV*