AlfalfaGEDB | MsG0580029577.01

M. sativa cultivar ZhongmuNo.1 / MsG0580029577.01

KEGG: K11982
GO: -
PFAM: PF13639

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029577.01.T01	AET00139.1	99.652	287	1	0	1	287	85	371	0	593

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029577.01.T01	O22197	48.837	301	121	10	15	286	31	327	1.91E-69	221

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029577.01.T01	G7KCR6	99.652	287	1	0	1	287	85	371	0.0	593

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180004149.01	MsG0580029577.01	0.801419	9.085422e-49	4.336734e-46
MsG0180005990.01	MsG0580029577.01	0.803487	3.406127e-49	1.713812e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029577.01.T01	MTR_5g088720	99.652	287	1	0	1	287	85	371	0.0	593
MsG0580029577.01.T01	MTR_5g088720	99.652	287	1	0	1	287	44	330	0.0	588
MsG0580029577.01.T01	MTR_5g088720	99.652	287	1	0	1	287	39	325	0.0	588
MsG0580029577.01.T01	MTR_0067s0100	62.249	249	78	5	12	259	47	280	3.57e-100	295
MsG0580029577.01.T01	MTR_1g051105	47.887	213	76	4	82	286	71	256	1.19e-61	196
MsG0580029577.01.T01	MTR_3g072630	56.637	113	49	0	95	207	154	266	2.02e-41	145
MsG0580029577.01.T01	MTR_3g072630	56.637	113	49	0	95	207	154	266	2.91e-41	145
MsG0580029577.01.T01	MTR_6g079660	51.969	127	52	4	85	207	159	280	5.51e-38	138
MsG0580029577.01.T01	MTR_2g097620	52.000	100	43	1	113	207	135	234	3.93e-33	124
MsG0580029577.01.T01	MTR_3g068005	53.000	100	42	1	113	207	142	241	5.04e-33	125
MsG0580029577.01.T01	MTR_3g083480	43.312	157	64	6	109	250	187	333	8.62e-33	124
MsG0580029577.01.T01	MTR_1g114320	45.455	121	60	4	110	226	139	257	3.69e-32	121
MsG0580029577.01.T01	MTR_4g064570	50.000	100	45	1	113	207	127	226	4.58e-32	122
MsG0580029577.01.T01	MTR_5g080350	46.774	124	57	2	111	225	133	256	1.50e-30	118
MsG0580029577.01.T01	MTR_7g074170	41.228	114	64	2	106	216	286	399	3.45e-26	107
MsG0580029577.01.T01	MTR_2g007340	56.250	64	28	0	143	206	182	245	4.22e-24	99.8
MsG0580029577.01.T01	MTR_1g114620	41.463	123	58	3	88	207	198	309	9.94e-24	99.0
MsG0580029577.01.T01	MTR_6g032960	36.986	146	79	5	109	250	184	320	1.69e-21	92.8
MsG0580029577.01.T01	MTR_5g041310	43.956	91	48	1	117	207	73	160	8.93e-20	85.9
MsG0580029577.01.T01	MTR_5g041330	45.055	91	47	1	117	207	63	150	1.32e-19	85.5
MsG0580029577.01.T01	MTR_4g110100	35.238	105	65	2	106	207	301	405	8.39e-18	83.2
MsG0580029577.01.T01	MTR_1g014710	36.957	92	53	2	120	206	186	277	5.58e-17	79.7
MsG0580029577.01.T01	MTR_3g088080	39.437	71	41	1	137	207	15	83	3.38e-16	72.8
MsG0580029577.01.T01	MTR_5g058530	48.333	60	30	1	148	206	209	268	1.78e-15	75.9
MsG0580029577.01.T01	MTR_6g016350	36.000	100	61	2	123	219	269	368	1.49e-14	73.6
MsG0580029577.01.T01	MTR_2g061790	54.762	42	19	0	162	203	109	150	2.13e-12	65.9
MsG0580029577.01.T01	MTR_4g106960	36.667	90	52	2	137	222	150	238	7.52e-12	65.5
MsG0580029577.01.T01	MTR_4g106960	36.667	90	52	2	137	222	207	295	9.09e-12	65.5
MsG0580029577.01.T01	MTR_4g106960	36.667	90	52	2	137	222	150	238	9.59e-12	64.7
MsG0580029577.01.T01	MTR_4g106960	36.667	90	52	2	137	222	207	295	1.20e-11	64.7
MsG0580029577.01.T01	MTR_5g022920	36.250	80	47	2	131	206	155	234	2.30e-11	62.8
MsG0580029577.01.T01	MTR_4g108830	36.508	63	39	1	142	203	126	188	4.16e-11	61.2
MsG0580029577.01.T01	MTR_4g108830	36.508	63	39	1	142	203	154	216	5.17e-11	61.6
MsG0580029577.01.T01	MTR_3g031000	38.028	71	36	2	137	207	279	341	5.24e-11	62.8
MsG0580029577.01.T01	MTR_8g074900	40.625	64	34	2	141	203	162	222	9.95e-11	60.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029577.01.T01	AT2G40830	48.837	301	121	10	15	286	31	327	1.95e-70	221
MsG0580029577.01.T01	AT2G40830	48.837	301	121	10	15	286	31	327	1.95e-70	221
MsG0580029577.01.T01	AT2G40830	48.837	301	121	10	15	286	31	327	1.95e-70	221
MsG0580029577.01.T01	AT2G40830	48.837	301	121	10	15	286	31	327	1.95e-70	221
MsG0580029577.01.T01	AT3G56580	53.138	239	81	9	37	259	51	274	4.72e-59	191
MsG0580029577.01.T01	AT3G56580	53.138	239	81	9	37	259	51	274	4.72e-59	191
MsG0580029577.01.T01	AT3G56580	53.138	239	81	9	37	259	51	274	4.72e-59	191
MsG0580029577.01.T01	AT3G10815	50.000	142	42	4	120	258	78	193	6.90e-40	138
MsG0580029577.01.T01	AT3G19950	55.882	102	42	2	109	207	160	261	1.09e-37	136
MsG0580029577.01.T01	AT3G19950	55.882	102	42	2	109	207	218	319	1.97e-37	137
MsG0580029577.01.T01	AT3G19950	55.882	102	42	2	109	207	218	319	1.97e-37	137
MsG0580029577.01.T01	AT5G56340	40.909	176	77	6	95	250	195	363	5.74e-35	130
MsG0580029577.01.T01	AT1G60360	45.342	161	68	7	98	252	161	307	9.51e-35	128
MsG0580029577.01.T01	AT5G59550	45.378	119	58	1	113	224	143	261	1.30e-30	119
MsG0580029577.01.T01	AT4G26400	40.972	144	75	3	111	249	193	331	1.90e-30	117
MsG0580029577.01.T01	AT4G26400	40.972	144	75	3	111	249	193	331	1.90e-30	117
MsG0580029577.01.T01	AT3G46620	50.000	102	44	1	113	207	159	260	2.50e-30	117
MsG0580029577.01.T01	AT5G59550	45.378	119	58	1	113	224	248	366	2.57e-30	119
MsG0580029577.01.T01	AT1G55530	34.091	176	108	3	51	224	116	285	4.29e-30	116
MsG0580029577.01.T01	AT1G55530	34.091	176	108	3	51	224	116	285	4.29e-30	116
MsG0580029577.01.T01	AT1G55530	36.735	147	80	3	80	224	117	252	2.84e-29	113
MsG0580029577.01.T01	AT2G39720	51.402	107	42	3	113	209	142	248	8.60e-29	114
MsG0580029577.01.T01	AT2G39720	51.402	107	42	3	113	209	142	248	8.60e-29	114
MsG0580029577.01.T01	AT3G13430	47.059	102	47	2	109	207	173	270	1.92e-28	111
MsG0580029577.01.T01	AT3G13430	47.059	102	47	2	109	207	173	270	1.92e-28	111
MsG0580029577.01.T01	AT3G13430	47.059	102	47	2	109	207	173	270	1.92e-28	111
MsG0580029577.01.T01	AT3G13430	47.059	102	47	2	109	207	173	270	1.92e-28	111
MsG0580029577.01.T01	AT5G01980	43.363	113	62	1	106	216	292	404	4.59e-27	110
MsG0580029577.01.T01	AT1G68180	44.915	118	56	3	134	251	110	218	5.75e-26	102
MsG0580029577.01.T01	AT3G60080	50.602	83	33	1	143	217	142	224	1.14e-20	90.1
MsG0580029577.01.T01	AT5G20910	34.646	127	70	4	96	211	155	279	1.28e-19	87.4
MsG0580029577.01.T01	AT3G02340	41.837	98	55	2	133	229	305	401	1.52e-19	88.2
MsG0580029577.01.T01	AT3G02340	41.837	98	55	2	133	229	305	401	1.52e-19	88.2
MsG0580029577.01.T01	AT5G15820	44.737	76	41	1	133	207	261	336	7.84e-19	85.5
MsG0580029577.01.T01	AT2G44330	38.655	119	63	3	95	207	27	141	1.18e-18	82.0
MsG0580029577.01.T01	AT1G26800	40.860	93	51	1	118	210	73	161	1.38e-18	82.4
MsG0580029577.01.T01	AT5G60820	35.294	136	83	2	76	207	283	417	7.77e-18	83.2
MsG0580029577.01.T01	AT5G08139	36.752	117	66	5	109	220	255	368	2.79e-17	81.3
MsG0580029577.01.T01	AT5G64920	40.000	105	56	2	109	206	197	301	2.08e-16	78.6
MsG0580029577.01.T01	AT1G14200	36.842	76	48	0	132	207	79	154	1.07e-15	73.9
MsG0580029577.01.T01	AT3G58720	45.070	71	38	1	159	228	141	211	3.13e-12	65.5
MsG0580029577.01.T01	AT3G58720	45.070	71	38	1	159	228	161	231	3.34e-12	65.5
MsG0580029577.01.T01	AT3G58720	45.070	71	38	1	159	228	169	239	4.06e-12	65.5
MsG0580029577.01.T01	AT5G02750	46.154	52	28	0	162	213	214	265	8.65e-12	64.7
MsG0580029577.01.T01	AT3G58720	45.070	71	38	1	159	228	169	239	9.89e-12	64.7
MsG0580029577.01.T01	AT4G10150	30.928	97	65	2	144	238	93	189	1.47e-11	63.5
MsG0580029577.01.T01	AT3G63530	32.609	92	53	3	121	206	153	241	3.55e-11	62.4
MsG0580029577.01.T01	AT3G63530	32.609	92	53	3	121	206	153	241	3.55e-11	62.4
MsG0580029577.01.T01	AT3G30460	38.028	71	40	2	144	210	77	147	8.93e-11	59.3

Find 86 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGACAATAGGTTTGGGCTTA+TGG	0.144953	5:+98825828	MsG0580029577.01.T01:CDS
TATAACGTGTTCCATTATTC+TGG	0.271470	5:-98826539	None:intergenic
TCCCAGTTCCTGAACAGGGC+TGG	0.287756	5:+98825929	MsG0580029577.01.T01:CDS
GGCTGGGGCGTTTATAGTTC+TGG	0.293414	5:+98825946	MsG0580029577.01.T01:CDS
CTCCCTCTAACATCAAAGTT+TGG	0.296005	5:-98825895	None:intergenic
GTATTTCATGGTCAAGTTCC+TGG	0.296498	5:+98825979	MsG0580029577.01.T01:CDS
CCCAGTTCCTGAACAGGGCT+GGG	0.305104	5:+98825930	MsG0580029577.01.T01:CDS
TTCTGTCCCAGTTCCTGAAC+AGG	0.322724	5:+98825924	MsG0580029577.01.T01:CDS
ACCAATGCTGACCAGAATAA+TGG	0.327570	5:+98826528	MsG0580029577.01.T01:CDS
GGATTTCTCCTTCCATTGTT+AGG	0.333484	5:-98826426	None:intergenic
AATAATGGAACACGTTATAA+TGG	0.335853	5:+98826543	MsG0580029577.01.T01:CDS
TTGATGCAATGCCTACTATT+AGG	0.339004	5:+98826148	MsG0580029577.01.T01:CDS
CCCCAGCCCTGTTCAGGAAC+TGG	0.343591	5:-98825931	None:intergenic
TACATTCAGAATGGTAAATA+TGG	0.350279	5:-98826263	None:intergenic
GGTCCTAGGCGTGGCGATTT+CGG	0.351499	5:+98826033	MsG0580029577.01.T01:CDS
TAAACGCCCCAGCCCTGTTC+AGG	0.367352	5:-98825937	None:intergenic
AGAGGTTCTGACAATAGGTT+TGG	0.376287	5:+98825820	MsG0580029577.01.T01:CDS
CACCCAAACTTTGATGTTAG+AGG	0.383978	5:+98825892	MsG0580029577.01.T01:CDS
TCCCTCTAACATCAAAGTTT+GGG	0.425458	5:-98825894	None:intergenic
TCCATTATTCTGGTCAGCAT+TGG	0.433872	5:-98826529	None:intergenic
GAAATGGTAGCTCAAGGGGC+AGG	0.434859	5:+98826391	MsG0580029577.01.T01:CDS
CCACCTCTCGGGCTTCCATT+AGG	0.440593	5:-98826012	None:intergenic
CCTGGACTAACCTTGCCTAA+TGG	0.441564	5:+98825997	MsG0580029577.01.T01:CDS
TCAATTGAAGATCGTGCAGC+TGG	0.442427	5:-98826129	None:intergenic
CGAAGCAACAGTGGTGGAAA+TGG	0.442575	5:+98826375	MsG0580029577.01.T01:CDS
TGGACCACGCCGATCATTCA+TGG	0.450347	5:-98826103	None:intergenic
CCCAGCCCTGTTCAGGAACT+GGG	0.453761	5:-98825930	None:intergenic
ATTCTGAATGTATTGTTCCT+TGG	0.454347	5:+98826274	MsG0580029577.01.T01:CDS
GGCACAGAGGTTCTGACAAT+AGG	0.463327	5:+98825815	MsG0580029577.01.T01:CDS
CACGCCTAGGACCACCTCTC+GGG	0.474492	5:-98826023	None:intergenic
TTCATGAGGCATAGAATGGC+TGG	0.476150	5:+98825865	MsG0580029577.01.T01:CDS
GGTAGCTCAACACGGCAAAC+AGG	0.476761	5:-98826318	None:intergenic
TGAATGTATTGTTCCTTGGT+TGG	0.476923	5:+98826278	MsG0580029577.01.T01:CDS
GAGGTTCTGACAATAGGTTT+GGG	0.480899	5:+98825821	MsG0580029577.01.T01:CDS
CCACGCCTAGGACCACCTCT+CGG	0.482101	5:-98826024	None:intergenic
TTCTCCTTCCATTGTTAGGA+CGG	0.494449	5:-98826422	None:intergenic
GAAGCCCGAGAGGTGGTCCT+AGG	0.494733	5:+98826019	MsG0580029577.01.T01:CDS
ATGGTCACATGGCATCTCTC+TGG	0.495307	5:-98826244	None:intergenic
TGTATAGCATCAAATAAGTC+AGG	0.495328	5:-98825781	None:intergenic
TAATTTCATGAGGCATAGAA+TGG	0.500689	5:+98825861	MsG0580029577.01.T01:CDS
CCATTAGGCAAGGTTAGTCC+AGG	0.516692	5:-98825997	None:intergenic
CCAGTTCCTGAACAGGGCTG+GGG	0.517490	5:+98825931	MsG0580029577.01.T01:CDS
CAATTGAAGATCGTGCAGCT+GGG	0.527634	5:-98826128	None:intergenic
CTCTCCCGAGCGTGATGGAA+AGG	0.532737	5:-98825746	None:intergenic
AAATACCTTTCCATCACGCT+CGG	0.536583	5:+98825741	MsG0580029577.01.T01:CDS
GCAGACTGGACAATGTGAAT+CGG	0.544019	5:-98826193	None:intergenic
GCCTGTGTGATCCTAATAGT+AGG	0.552792	5:-98826159	None:intergenic
GTGGTGGAAATGGTAGCTCA+AGG	0.554250	5:+98826385	MsG0580029577.01.T01:CDS
AATAATCAATATTCTGAGAG+TGG	0.558489	5:+98826489	MsG0580029577.01.T01:CDS
ATGGAACACGTTATAATGGA+TGG	0.563370	5:+98826547	MsG0580029577.01.T01:CDS
ACCCAAACTTTGATGTTAGA+GGG	0.565011	5:+98825893	MsG0580029577.01.T01:CDS
AACAACTAACCATGAATGAT+CGG	0.565917	5:+98826094	MsG0580029577.01.T01:CDS
AACGGCCACAGAAATGAAAA+CGG	0.567397	5:-98826447	None:intergenic
AAATGGTAGCTCAAGGGGCA+GGG	0.567954	5:+98826392	MsG0580029577.01.T01:CDS
TGGTGGAAATGGTAGCTCAA+GGG	0.569039	5:+98826386	MsG0580029577.01.T01:CDS
AAGGAACAATACATTCAGAA+TGG	0.573178	5:-98826272	None:intergenic
AATTGAAGATCGTGCAGCTG+GGG	0.576072	5:-98826127	None:intergenic
AATACCTTTCCATCACGCTC+GGG	0.577219	5:+98825742	MsG0580029577.01.T01:CDS
TCACCGAAATCGCCACGCCT+AGG	0.578724	5:-98826036	None:intergenic
GGTGGAAATGGTAGCTCAAG+GGG	0.581164	5:+98826387	MsG0580029577.01.T01:CDS
TTAAACTCTCCCGAGCGTGA+TGG	0.588811	5:-98825751	None:intergenic
TATTGTTTGAACTAGAAGAA+CGG	0.600491	5:-98826470	None:intergenic
TCTCGGGCTTCCATTAGGCA+AGG	0.606325	5:-98826007	None:intergenic
CCGAGAGGTGGTCCTAGGCG+TGG	0.606422	5:+98826024	MsG0580029577.01.T01:CDS
ATTGAAGATCGTGCAGCTGG+GGG	0.607854	5:-98826126	None:intergenic
GAGAGTGACCGTCCTAACAA+TGG	0.610294	5:+98826414	MsG0580029577.01.T01:CDS
TCTGTCCCAGTTCCTGAACA+GGG	0.612021	5:+98825925	MsG0580029577.01.T01:CDS
CGAGAACTCATCTGTCCTTG+TGG	0.617859	5:-98826342	None:intergenic
GAATGGTAAATATGGTCACA+TGG	0.629134	5:-98826255	None:intergenic
AGTAGTCGAAGCAACAGTGG+TGG	0.638220	5:+98826369	MsG0580029577.01.T01:CDS
CCTAATGGAAGCCCGAGAGG+TGG	0.642945	5:+98826012	MsG0580029577.01.T01:CDS
GTGACCGTCCTAACAATGGA+AGG	0.643870	5:+98826418	MsG0580029577.01.T01:CDS
CTTGTGGTGGTAGCTCAACA+CGG	0.645208	5:-98826326	None:intergenic
CGTGTTGAGCTACCACCACA+AGG	0.646648	5:+98826327	MsG0580029577.01.T01:CDS
TTGCCTAATGGAAGCCCGAG+AGG	0.670811	5:+98826009	MsG0580029577.01.T01:CDS
GAACTCATCTGTCCTTGTGG+TGG	0.671137	5:-98826339	None:intergenic
AATCAATATTCTGAGAGTGG+AGG	0.671363	5:+98826492	MsG0580029577.01.T01:CDS
CAAGGACAGATGAGTTCTCG+TGG	0.679090	5:+98826345	MsG0580029577.01.T01:CDS
GAGTTATGTTGAACCAACCA+AGG	0.692810	5:-98826291	None:intergenic
CAAGAAATTAACGAGATGCG+AGG	0.695840	5:+98825706	None:intergenic
CAAACTTTGATGTTAGAGGG+AGG	0.698975	5:+98825896	MsG0580029577.01.T01:CDS
ATGCTGTTGATAATTTCATG+AGG	0.699793	5:+98825851	MsG0580029577.01.T01:CDS
GCCTACTATTAGGATCACAC+AGG	0.708442	5:+98826158	MsG0580029577.01.T01:CDS
GGTAGTAGTCGAAGCAACAG+TGG	0.708997	5:+98826366	MsG0580029577.01.T01:CDS
TTTGAACTAGAAGAACGGAA+CGG	0.720066	5:-98826465	None:intergenic
CTAACCATGAATGATCGGCG+TGG	0.777204	5:+98826099	MsG0580029577.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TACATTCAGAATGGTAAATA+TGG	-	Chr5:98826266-98826285	None:intergenic	25.0%
!	TATTGTTTGAACTAGAAGAA+CGG	-	Chr5:98826473-98826492	None:intergenic	25.0%
!	TGACCATGAAATACTAAAAA+AGG	-	Chr5:98825973-98825992	None:intergenic	25.0%
!	TGCAAAGAAAAATTTGAACT+TGG	+	Chr5:98826213-98826232	MsG0580029577.01.T01:CDS	25.0%
!!	AATAATCAATATTCTGAGAG+TGG	+	Chr5:98826489-98826508	MsG0580029577.01.T01:CDS	25.0%
!!	AATAATGGAACACGTTATAA+TGG	+	Chr5:98826543-98826562	MsG0580029577.01.T01:CDS	25.0%
	AACAACTAACCATGAATGAT+CGG	+	Chr5:98826094-98826113	MsG0580029577.01.T01:CDS	30.0%
	AAGGAACAATACATTCAGAA+TGG	-	Chr5:98826275-98826294	None:intergenic	30.0%
	ATTCTGAATGTATTGTTCCT+TGG	+	Chr5:98826274-98826293	MsG0580029577.01.T01:CDS	30.0%
	TAATTTCATGAGGCATAGAA+TGG	+	Chr5:98825861-98825880	MsG0580029577.01.T01:CDS	30.0%
	TATAACGTGTTCCATTATTC+TGG	-	Chr5:98826542-98826561	None:intergenic	30.0%
	TGTATAGCATCAAATAAGTC+AGG	-	Chr5:98825784-98825803	None:intergenic	30.0%
!	GATTTCGGTGACTATTTTAT+GGG	+	Chr5:98826048-98826067	MsG0580029577.01.T01:CDS	30.0%
!	TCAAATTTTTCTTTGCAGAC+TGG	-	Chr5:98826210-98826229	None:intergenic	30.0%
!!	ATGCTGTTGATAATTTCATG+AGG	+	Chr5:98825851-98825870	MsG0580029577.01.T01:CDS	30.0%
!!!	GGTCCTTTTTTAGTATTTCA+TGG	+	Chr5:98825967-98825986	MsG0580029577.01.T01:CDS	30.0%
	ACCCAAACTTTGATGTTAGA+GGG	+	Chr5:98825893-98825912	MsG0580029577.01.T01:CDS	35.0%
	GAATGGTAAATATGGTCACA+TGG	-	Chr5:98826258-98826277	None:intergenic	35.0%
	TCCCTCTAACATCAAAGTTT+GGG	-	Chr5:98825897-98825916	None:intergenic	35.0%
	TGAATGTATTGTTCCTTGGT+TGG	+	Chr5:98826278-98826297	MsG0580029577.01.T01:CDS	35.0%
	TTGATGCAATGCCTACTATT+AGG	+	Chr5:98826148-98826167	MsG0580029577.01.T01:CDS	35.0%
	TTTGAACTAGAAGAACGGAA+CGG	-	Chr5:98826468-98826487	None:intergenic	35.0%
!	AATCAATATTCTGAGAGTGG+AGG	+	Chr5:98826492-98826511	MsG0580029577.01.T01:CDS	35.0%
!	ATGCTATACATGCTTTTGTG+GGG	+	Chr5:98825794-98825813	MsG0580029577.01.T01:CDS	35.0%
!	ATGGAACACGTTATAATGGA+TGG	+	Chr5:98826547-98826566	MsG0580029577.01.T01:CDS	35.0%
!	CGATTTCGGTGACTATTTTA+TGG	+	Chr5:98826047-98826066	MsG0580029577.01.T01:CDS	35.0%
!	GAAATCCGTTTTCATTTCTG+TGG	+	Chr5:98826442-98826461	MsG0580029577.01.T01:CDS	35.0%
!	GATGCTATACATGCTTTTGT+GGG	+	Chr5:98825793-98825812	MsG0580029577.01.T01:CDS	35.0%
!	TGATGCTATACATGCTTTTG+TGG	+	Chr5:98825792-98825811	MsG0580029577.01.T01:CDS	35.0%
	AAATACCTTTCCATCACGCT+CGG	+	Chr5:98825741-98825760	MsG0580029577.01.T01:CDS	40.0%
	AACGGCCACAGAAATGAAAA+CGG	-	Chr5:98826450-98826469	None:intergenic	40.0%
	ACCAATGCTGACCAGAATAA+TGG	+	Chr5:98826528-98826547	MsG0580029577.01.T01:CDS	40.0%
	CAAACTTTGATGTTAGAGGG+AGG	+	Chr5:98825896-98825915	MsG0580029577.01.T01:CDS	40.0%
	CACCCAAACTTTGATGTTAG+AGG	+	Chr5:98825892-98825911	MsG0580029577.01.T01:CDS	40.0%
	CTCCCTCTAACATCAAAGTT+TGG	-	Chr5:98825898-98825917	None:intergenic	40.0%
	GAGTTATGTTGAACCAACCA+AGG	-	Chr5:98826294-98826313	None:intergenic	40.0%
	GGATTTCTCCTTCCATTGTT+AGG	-	Chr5:98826429-98826448	None:intergenic	40.0%
	GTATTTCATGGTCAAGTTCC+TGG	+	Chr5:98825979-98825998	MsG0580029577.01.T01:CDS	40.0%
	TCCATTATTCTGGTCAGCAT+TGG	-	Chr5:98826532-98826551	None:intergenic	40.0%
	TGACAATAGGTTTGGGCTTA+TGG	+	Chr5:98825828-98825847	MsG0580029577.01.T01:CDS	40.0%
	TTCTCCTTCCATTGTTAGGA+CGG	-	Chr5:98826425-98826444	None:intergenic	40.0%
!	AGAGGTTCTGACAATAGGTT+TGG	+	Chr5:98825820-98825839	MsG0580029577.01.T01:CDS	40.0%
!	GAGGTTCTGACAATAGGTTT+GGG	+	Chr5:98825821-98825840	MsG0580029577.01.T01:CDS	40.0%
!	GGTGACTATTTTATGGGTTC+TGG	+	Chr5:98826054-98826073	MsG0580029577.01.T01:CDS	40.0%
!!!	CGTGATGGAAAGGTATTTTG+AGG	-	Chr5:98825739-98825758	None:intergenic	40.0%
!!!	CTATTTTATGGGTTCTGGAC+TGG	+	Chr5:98826059-98826078	MsG0580029577.01.T01:CDS	40.0%
	AATACCTTTCCATCACGCTC+GGG	+	Chr5:98825742-98825761	MsG0580029577.01.T01:CDS	45.0%
	AATTGAAGATCGTGCAGCTG+GGG	-	Chr5:98826130-98826149	None:intergenic	45.0%
	CAATTGAAGATCGTGCAGCT+GGG	-	Chr5:98826131-98826150	None:intergenic	45.0%
	GCAGACTGGACAATGTGAAT+CGG	-	Chr5:98826196-98826215	None:intergenic	45.0%
	GCCTACTATTAGGATCACAC+AGG	+	Chr5:98826158-98826177	MsG0580029577.01.T01:CDS	45.0%
	GCCTGTGTGATCCTAATAGT+AGG	-	Chr5:98826162-98826181	None:intergenic	45.0%
	TCAATTGAAGATCGTGCAGC+TGG	-	Chr5:98826132-98826151	None:intergenic	45.0%
	TGGTGGAAATGGTAGCTCAA+GGG	+	Chr5:98826386-98826405	MsG0580029577.01.T01:CDS	45.0%
	TTCATGAGGCATAGAATGGC+TGG	+	Chr5:98825865-98825884	MsG0580029577.01.T01:CDS	45.0%
	AAATGGTAGCTCAAGGGGCA+GGG	+	Chr5:98826392-98826411	MsG0580029577.01.T01:CDS	50.0%
	AGTAGTCGAAGCAACAGTGG+TGG	+	Chr5:98826369-98826388	MsG0580029577.01.T01:CDS	50.0%
	ATGGTCACATGGCATCTCTC+TGG	-	Chr5:98826247-98826266	None:intergenic	50.0%
	ATTGAAGATCGTGCAGCTGG+GGG	-	Chr5:98826129-98826148	None:intergenic	50.0%
	CAAGGACAGATGAGTTCTCG+TGG	+	Chr5:98826345-98826364	MsG0580029577.01.T01:CDS	50.0%
	CCTGGACTAACCTTGCCTAA+TGG	+	Chr5:98825997-98826016	MsG0580029577.01.T01:CDS	50.0%
	CGAGAACTCATCTGTCCTTG+TGG	-	Chr5:98826345-98826364	None:intergenic	50.0%
	CTAACCATGAATGATCGGCG+TGG	+	Chr5:98826099-98826118	MsG0580029577.01.T01:CDS	50.0%
	CTTGTGGTGGTAGCTCAACA+CGG	-	Chr5:98826329-98826348	None:intergenic	50.0%
	GAACTCATCTGTCCTTGTGG+TGG	-	Chr5:98826342-98826361	None:intergenic	50.0%
	GAGAGTGACCGTCCTAACAA+TGG	+	Chr5:98826414-98826433	MsG0580029577.01.T01:CDS	50.0%
	GGTAGTAGTCGAAGCAACAG+TGG	+	Chr5:98826366-98826385	MsG0580029577.01.T01:CDS	50.0%
	GGTGGAAATGGTAGCTCAAG+GGG	+	Chr5:98826387-98826406	MsG0580029577.01.T01:CDS	50.0%
	GTGACCGTCCTAACAATGGA+AGG	+	Chr5:98826418-98826437	MsG0580029577.01.T01:CDS	50.0%
	TCTGTCCCAGTTCCTGAACA+GGG	+	Chr5:98825925-98825944	MsG0580029577.01.T01:CDS	50.0%
	TTAAACTCTCCCGAGCGTGA+TGG	-	Chr5:98825754-98825773	None:intergenic	50.0%
	TTCTGTCCCAGTTCCTGAAC+AGG	+	Chr5:98825924-98825943	MsG0580029577.01.T01:CDS	50.0%
!	CCATTAGGCAAGGTTAGTCC+AGG	-	Chr5:98826000-98826019	None:intergenic	50.0%
!	CGAAGCAACAGTGGTGGAAA+TGG	+	Chr5:98826375-98826394	MsG0580029577.01.T01:CDS	50.0%
!	GGCACAGAGGTTCTGACAAT+AGG	+	Chr5:98825815-98825834	MsG0580029577.01.T01:CDS	50.0%
!	GTGGTGGAAATGGTAGCTCA+AGG	+	Chr5:98826385-98826404	MsG0580029577.01.T01:CDS	50.0%
	CGTGTTGAGCTACCACCACA+AGG	+	Chr5:98826327-98826346	MsG0580029577.01.T01:CDS	55.0%
	GAAATGGTAGCTCAAGGGGC+AGG	+	Chr5:98826391-98826410	MsG0580029577.01.T01:CDS	55.0%
	GGTAGCTCAACACGGCAAAC+AGG	-	Chr5:98826321-98826340	None:intergenic	55.0%
	TCTCGGGCTTCCATTAGGCA+AGG	-	Chr5:98826010-98826029	None:intergenic	55.0%
	TGGACCACGCCGATCATTCA+TGG	-	Chr5:98826106-98826125	None:intergenic	55.0%
	TTGCCTAATGGAAGCCCGAG+AGG	+	Chr5:98826009-98826028	MsG0580029577.01.T01:CDS	55.0%
!	CATGCTTTTGTGGGGCACAG+AGG	+	Chr5:98825802-98825821	MsG0580029577.01.T01:CDS	55.0%
!	GGCTGGGGCGTTTATAGTTC+TGG	+	Chr5:98825946-98825965	MsG0580029577.01.T01:CDS	55.0%
	CCACCTCTCGGGCTTCCATT+AGG	-	Chr5:98826015-98826034	None:intergenic	60.0%
	CCAGTTCCTGAACAGGGCTG+GGG	+	Chr5:98825931-98825950	MsG0580029577.01.T01:CDS	60.0%
	CCCAGCCCTGTTCAGGAACT+GGG	-	Chr5:98825933-98825952	None:intergenic	60.0%
	CCCAGTTCCTGAACAGGGCT+GGG	+	Chr5:98825930-98825949	MsG0580029577.01.T01:CDS	60.0%
	CCTAATGGAAGCCCGAGAGG+TGG	+	Chr5:98826012-98826031	MsG0580029577.01.T01:CDS	60.0%
	GGTCCTAGGCGTGGCGATTT+CGG	+	Chr5:98826033-98826052	MsG0580029577.01.T01:CDS	60.0%
	TAAACGCCCCAGCCCTGTTC+AGG	-	Chr5:98825940-98825959	None:intergenic	60.0%
	TCACCGAAATCGCCACGCCT+AGG	-	Chr5:98826039-98826058	None:intergenic	60.0%
	TCCCAGTTCCTGAACAGGGC+TGG	+	Chr5:98825929-98825948	MsG0580029577.01.T01:CDS	60.0%
!	CTCTCCCGAGCGTGATGGAA+AGG	-	Chr5:98825749-98825768	None:intergenic	60.0%
	CACGCCTAGGACCACCTCTC+GGG	-	Chr5:98826026-98826045	None:intergenic	65.0%
	CCACGCCTAGGACCACCTCT+CGG	-	Chr5:98826027-98826046	None:intergenic	65.0%
	CCCCAGCCCTGTTCAGGAAC+TGG	-	Chr5:98825934-98825953	None:intergenic	65.0%
	GAAGATCGTGCAGCTGGGGG+TGG	-	Chr5:98826126-98826145	None:intergenic	65.0%
	GAAGCCCGAGAGGTGGTCCT+AGG	+	Chr5:98826019-98826038	MsG0580029577.01.T01:CDS	65.0%
	CCGAGAGGTGGTCCTAGGCG+TGG	+	Chr5:98826024-98826043	MsG0580029577.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	98825721	98826584	98825721	ID=MsG0580029577.01;Name=MsG0580029577.01
Chr5	mRNA	98825721	98826584	98825721	ID=MsG0580029577.01.T01;Parent=MsG0580029577.01;Name=MsG0580029577.01.T01;_AED=0.42;_eAED=0.42;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|287
Chr5	exon	98825721	98826584	98825721	ID=MsG0580029577.01.T01:exon:25892;Parent=MsG0580029577.01.T01
Chr5	CDS	98825721	98826584	98825721	ID=MsG0580029577.01.T01:cds;Parent=MsG0580029577.01.T01

Gene Sequence

>MsG0580029577.01.T01

ATGCGAGGCACTGCACCTCAAAATACCTTTCCATCACGCTCGGGAGAGTTTAATCAAATGCCTGACTTATTTGATGCTATACATGCTTTTGTGGGGCACAGAGGTTCTGACAATAGGTTTGGGCTTATGGATGCTGTTGATAATTTCATGAGGCATAGAATGGCTGGAATGCACCCAAACTTTGATGTTAGAGGGAGGTCTAGTTCTGTCCCAGTTCCTGAACAGGGCTGGGGCGTTTATAGTTCTGGTCCTTTTTTAGTATTTCATGGTCAAGTTCCTGGACTAACCTTGCCTAATGGAAGCCCGAGAGGTGGTCCTAGGCGTGGCGATTTCGGTGACTATTTTATGGGTTCTGGACTGGAAGAACTTATTGAACAACTAACCATGAATGATCGGCGTGGTCCACCCCCAGCTGCACGATCTTCAATTGATGCAATGCCTACTATTAGGATCACACAGGCGCATCTTCGCTCCGATTCACATTGTCCAGTCTGCAAAGAAAAATTTGAACTTGGTTCTGAAGCCAGAGAGATGCCATGTGACCATATTTACCATTCTGAATGTATTGTTCCTTGGTTGGTTCAACATAACTCGTGTCCTGTTTGCCGTGTTGAGCTACCACCACAAGGACAGATGAGTTCTCGTGGTAGTAGTCGAAGCAACAGTGGTGGAAATGGTAGCTCAAGGGGCAGGGAGAGTGACCGTCCTAACAATGGAAGGAGAAATCCGTTTTCATTTCTGTGGCCGTTCCGTTCTTCTAGTTCAAACAATAATCAATATTCTGAGAGTGGAGGTAGCAGCTCTTCAACCAATGCTGACCAGAATAATGGAACACGTTATAATGGATGGCATTATGATAACTAA

Protein sequence

>MsG0580029577.01.T01

MRGTAPQNTFPSRSGEFNQMPDLFDAIHAFVGHRGSDNRFGLMDAVDNFMRHRMAGMHPNFDVRGRSSSVPVPEQGWGVYSSGPFLVFHGQVPGLTLPNGSPRGGPRRGDFGDYFMGSGLEELIEQLTMNDRRGPPPAARSSIDAMPTIRITQAHLRSDSHCPVCKEKFELGSEAREMPCDHIYHSECIVPWLVQHNSCPVCRVELPPQGQMSSRGSSRSNSGGNGSSRGRESDRPNNGRRNPFSFLWPFRSSSSNNNQYSESGGSSSSTNADQNNGTRYNGWHYDN*