AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029606.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029606.01.T01 MTR_5g089340 86.628 172 23 0 1 172 1 172 1.84e-92 275
MsG0580029606.01.T01 MTR_5g089340 86.628 172 23 0 1 172 1 172 1.58e-91 276
MsG0580029606.01.T01 MTR_5g089340 100.000 57 0 0 184 240 381 437 8.81e-29 112
MsG0580029606.01.T01 MTR_0028s0090 54.286 175 70 4 1 172 1 168 6.82e-41 143
MsG0580029606.01.T01 MTR_0028s0090 54.286 175 70 4 1 172 1 168 2.12e-40 144
MsG0580029606.01.T01 MTR_0028s0090 66.154 65 22 0 172 236 365 429 1.23e-19 87.4
MsG0580029606.01.T01 MTR_3g099780 64.773 88 31 0 96 183 85 172 2.27e-32 122
MsG0580029606.01.T01 MTR_5g089340 84.058 69 11 0 172 240 256 324 1.21e-29 113
MsG0580029606.01.T01 MTR_5g089340 100.000 37 0 0 136 172 23 59 3.62e-17 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029606.01.T01 AT5G12170 53.719 121 49 2 58 172 64 183 1.12e-36 131
MsG0580029606.01.T01 AT5G19380 60.684 117 43 2 57 173 69 182 1.88e-36 134
MsG0580029606.01.T01 AT5G19380 66.000 50 17 0 184 233 390 439 1.81e-15 75.5
MsG0580029606.01.T01 AT5G12170 53.719 121 49 2 58 172 64 183 1.98e-35 131
MsG0580029606.01.T01 AT5G12170 44.615 65 36 0 172 236 380 444 6.39e-13 68.2
MsG0580029606.01.T01 AT4G24460 62.366 93 34 1 91 183 90 181 8.42e-32 119
MsG0580029606.01.T01 AT4G24460 62.366 93 34 1 91 183 90 181 1.13e-30 118
MsG0580029606.01.T01 AT4G24460 62.366 93 34 1 91 183 90 181 1.13e-30 118
MsG0580029606.01.T01 AT5G19380 57.500 80 31 2 57 136 69 145 4.44e-17 80.1
MsG0580029606.01.T01 AT5G19380 64.706 51 18 0 183 233 449 499 1.56e-15 75.9
MsG0580029606.01.T01 AT4G24460 61.702 47 18 0 136 182 6 52 1.04e-11 63.9

Find 103 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGACTCCATTTGTTGTTAT+TGG 0.159759 5:-99326834 MsG0580029606.01.T01:CDS
ATTTGTTGTTATTGGTCTTT+TGG 0.188057 5:-99326826 MsG0580029606.01.T01:CDS
AGATATGTGATTGTGTATTT+TGG 0.200886 5:-99326915 MsG0580029606.01.T01:CDS
TTGCACAGCTTTCCACTTTC+GGG 0.212317 5:-99327626 MsG0580029606.01.T01:intron
CTTGCACAGCTTTCCACTTT+CGG 0.251818 5:-99327627 MsG0580029606.01.T01:CDS
CGCGGCGGCGACGGTTGTAA+TGG 0.297085 5:-99327712 MsG0580029606.01.T01:CDS
CCGCCGGAGACGGCGGCGCA+CGG 0.298678 5:-99327845 MsG0580029606.01.T01:CDS
CTTCCCACAGGCTTTGTGGC+AGG 0.306335 5:-99322793 MsG0580029606.01.T01:CDS
GGGGCCATAGTTCTCATTAT+TGG 0.308845 5:-99322772 MsG0580029606.01.T01:CDS
GAGGCTCTTGCTGCTGCAAC+TGG 0.308990 5:-99326804 MsG0580029606.01.T01:CDS
ACTCCTTCAAATGGCTCTTC+AGG 0.336839 5:-99322730 MsG0580029606.01.T01:CDS
ATAACAACAAATGGAGTCTT+TGG 0.340786 5:+99326837 None:intergenic
CCGCCGTGCGCCGCCGTCTC+CGG 0.345744 5:+99327842 None:intergenic
GGCGGAGGTGGCGGTGGCCG+CGG 0.349139 5:-99327730 MsG0580029606.01.T01:CDS
TTCCCACAGGCTTTGTGGCA+GGG 0.353313 5:-99322792 MsG0580029606.01.T01:CDS
TCCCACAGGCTTTGTGGCAG+GGG 0.361321 5:-99322791 MsG0580029606.01.T01:CDS
ATCTCTTCCCACAGGCTTTG+TGG 0.374738 5:-99322797 MsG0580029606.01.T01:CDS
AGTGCAATGGCTCCGGCGTC+TGG 0.376674 5:+99327984 None:intergenic
TTGACGGTGGTTGGCGCCGC+CGG 0.385640 5:-99327861 MsG0580029606.01.T01:CDS
AGATGATCACTGGGGATTGC+CGG 0.386307 5:-99327932 MsG0580029606.01.T01:CDS
GTGAACACATAGATGGATAT+TGG 0.390660 5:+99322850 None:intergenic
GGCGGTGGCCGCGGCGGCGA+CGG 0.392280 5:-99327721 MsG0580029606.01.T01:CDS
GAGACGGCGGCGCACGGCGG+AGG 0.415036 5:-99327839 MsG0580029606.01.T01:CDS
TAAGCCAATAATGAGAACTA+TGG 0.415658 5:+99322768 None:intergenic
GCGGCGGCGACGGTTGTAAT+GGG 0.419993 5:-99327711 MsG0580029606.01.T01:CDS
AAAAGACCAATAACAACAAA+TGG 0.431999 5:+99326828 None:intergenic
TAGACCGGCGGAGGTGGCGG+TGG 0.432581 5:-99327736 MsG0580029606.01.T01:CDS
GGGGATTGCCGGATCAGATA+TGG 0.433968 5:-99327921 MsG0580029606.01.T01:CDS
TCAACGTCCTCGTCGGCTGA+TGG 0.437154 5:+99327892 None:intergenic
CCGTGCGCCGCCGTCTCCGG+CGG 0.439533 5:+99327845 None:intergenic
GGAGCCATTGCACTGCCTGC+CGG 0.445621 5:-99327975 MsG0580029606.01.T01:CDS
GGAAATAACCATATCTGATC+CGG 0.447859 5:+99327913 None:intergenic
GCTGCAACTGGAATGGCTGC+AGG 0.449008 5:-99326792 MsG0580029606.01.T01:CDS
TTGAAGTGTGAACACATAGA+TGG 0.456602 5:+99322843 None:intergenic
CGGCGACCGGAGATGATCAC+TGG 0.462043 5:-99327942 MsG0580029606.01.T01:CDS
GTTGCTTCATCTCTTCCCAC+AGG 0.462258 5:-99322805 MsG0580029606.01.T01:CDS
AGTTCTTTATAAGTTAGCTT+TGG 0.464508 5:-99327676 MsG0580029606.01.T01:CDS
GCGGCCACCGCCACCTCCGC+CGG 0.464520 5:+99327732 None:intergenic
TCAGGTGCTTCCTTCTCAGA+GGG 0.466708 5:-99322712 MsG0580029606.01.T01:CDS
TGCAATTACGCGGTGAAGGA+TGG 0.466759 5:-99327798 MsG0580029606.01.T01:CDS
GAATAGACCGGCGGAGGTGG+CGG 0.470748 5:-99327739 MsG0580029606.01.T01:CDS
GTGGTTGGCGCCGCCGGAGA+CGG 0.470884 5:-99327855 MsG0580029606.01.T01:CDS
CGGCGGCGCACGGCGGAGGA+AGG 0.473061 5:-99327835 MsG0580029606.01.T01:CDS
CGCCGGAGTCTAACGCCGGC+AGG 0.479007 5:+99327960 None:intergenic
GGAGGTGGCGGTGGCCGCGG+CGG 0.480169 5:-99327727 MsG0580029606.01.T01:CDS
CGGTGAAGGATGGGAGTGTA+GGG 0.481678 5:-99327788 MsG0580029606.01.T01:CDS
TGTGAATAGACCGGCGGAGG+TGG 0.488796 5:-99327742 MsG0580029606.01.T01:CDS
ATGTATATTCGGCACCGTGC+CGG 0.489380 5:-99326888 MsG0580029606.01.T01:CDS
TCTTGCTGCTGCAACTGGAA+TGG 0.490220 5:-99326799 MsG0580029606.01.T01:CDS
CCGGAGACGGCGGCGCACGG+CGG 0.496318 5:-99327842 MsG0580029606.01.T01:CDS
ACGGCGGAGGAAGGAGAAGG+TGG 0.502616 5:-99327826 MsG0580029606.01.T01:CDS
GGCAGGCAGTGCAATGGCTC+CGG 0.507027 5:+99327977 None:intergenic
GTTGGCGCCGCCGGAGACGG+CGG 0.507263 5:-99327852 MsG0580029606.01.T01:CDS
GAAAGCTGTGCAAGGAAGAA+AGG 0.510496 5:+99327636 None:intergenic
GTGAATGAAGTACCCGAAAG+TGG 0.514168 5:+99327614 None:intergenic
GTAGGGAATGATGACGTGGC+GGG 0.516833 5:-99327771 MsG0580029606.01.T01:CDS
TATGCATGGACTCCTTCAAA+TGG 0.517222 5:-99322739 MsG0580029606.01.T01:CDS
GCGGTGAAGGATGGGAGTGT+AGG 0.519743 5:-99327789 MsG0580029606.01.T01:CDS
CGGCGGAGGAAGGAGAAGGT+GGG 0.520169 5:-99327825 MsG0580029606.01.T01:CDS
CGGCGTTAGACTCCGGCGAC+CGG 0.520644 5:-99327955 MsG0580029606.01.T01:CDS
GGCCCCTGCCACAAAGCCTG+TGG 0.527028 5:+99322789 None:intergenic
GCAATTACGCGGTGAAGGAT+GGG 0.527191 5:-99327797 MsG0580029606.01.T01:CDS
AAGAAAGGATACTGTTTCAA+AGG 0.529790 5:+99327651 None:intergenic
TTGGCTTACTCATTTATGCA+TGG 0.535760 5:-99322753 MsG0580029606.01.T01:CDS
CGCACGGCGGAGGAAGGAGA+AGG 0.538599 5:-99327829 MsG0580029606.01.T01:CDS
CAGTGATCATCTCCGGTCGC+CGG 0.541396 5:+99327943 None:intergenic
GCACCTGAAGAGCCATTTGA+AGG 0.541423 5:+99322727 None:intergenic
ACACTTCAATTGCCATACCT+TGG 0.541912 5:-99322829 MsG0580029606.01.T01:CDS
TTCAGGTGCTTCCTTCTCAG+AGG 0.546205 5:-99322713 MsG0580029606.01.T01:CDS
TTCATTCTCAACGTCCTCGT+CGG 0.549038 5:+99327885 None:intergenic
TATCGATGGCATCATTCTGC+CGG 0.559396 5:-99328013 None:intergenic
AGAATGAAGTTGACGGTGGT+TGG 0.560700 5:-99327870 MsG0580029606.01.T01:CDS
GACATGCAATTACGCGGTGA+AGG 0.565552 5:-99327802 MsG0580029606.01.T01:CDS
CAATCCCCAGTGATCATCTC+CGG 0.565924 5:+99327936 None:intergenic
GGCGGAGGAAGGAGAAGGTG+GGG 0.572145 5:-99327824 MsG0580029606.01.T01:CDS
GATGAAGCAACACCAAGGTA+TGG 0.572926 5:+99322817 None:intergenic
TGCCTGCCGGCGTTAGACTC+CGG 0.581411 5:-99327962 MsG0580029606.01.T01:CDS
GCGACGGTTGTAATGGGTGT+CGG 0.583233 5:-99327705 MsG0580029606.01.T01:CDS
CTCCGGCGTCTGGACACCGC+CGG 0.583465 5:+99327994 None:intergenic
AACGCCGGCAGGCAGTGCAA+TGG 0.586163 5:+99327971 None:intergenic
GGCGACCGGAGATGATCACT+GGG 0.587690 5:-99327941 MsG0580029606.01.T01:CDS
GAGTGTGAATAGACCGGCGG+AGG 0.592555 5:-99327745 MsG0580029606.01.T01:CDS
TGCCGGCGGTGTCCAGACGC+CGG 0.593683 5:-99327996 MsG0580029606.01.T01:CDS
GGGGAAGAGTGTGAATAGAC+CGG 0.594697 5:-99327751 MsG0580029606.01.T01:CDS
GACGTTGAGAATGAAGTTGA+CGG 0.595919 5:-99327877 MsG0580029606.01.T01:CDS
GCCCCTGCCACAAAGCCTGT+GGG 0.604936 5:+99322790 None:intergenic
CGAAAGTGGAAAGCTGTGCA+AGG 0.606489 5:+99327628 None:intergenic
CTAGGTGGAACCCTCTGAGA+AGG 0.607300 5:+99322702 None:intergenic
CATCAGTAACAATGCCGGCA+CGG 0.607826 5:+99326874 None:intergenic
CATCTCATCAGTAACAATGC+CGG 0.616732 5:+99326869 None:intergenic
GTTATTTCCATCAGCCGACG+AGG 0.629110 5:-99327899 MsG0580029606.01.T01:CDS
CGGTCGCCGGAGTCTAACGC+CGG 0.631086 5:+99327956 None:intergenic
TAGGGAATGATGACGTGGCG+GGG 0.641648 5:-99327770 MsG0580029606.01.T01:CDS
CATTACAACCGTCGCCGCCG+CGG 0.647840 5:+99327713 None:intergenic
CGATGGCATCATTCTGCCGG+CGG 0.658648 5:-99328010 MsG0580029606.01.T01:CDS
TGTAGGGAATGATGACGTGG+CGG 0.671419 5:-99327772 MsG0580029606.01.T01:CDS
GCAACTGGAATGGCTGCAGG+AGG 0.677069 5:-99326789 MsG0580029606.01.T01:intron
GAGTGTAGGGAATGATGACG+TGG 0.720545 5:-99327775 MsG0580029606.01.T01:CDS
GAAGAGTGTGAATAGACCGG+CGG 0.721952 5:-99327748 MsG0580029606.01.T01:CDS
GAAGAGATGAAGCAACACCA+AGG 0.727287 5:+99322812 None:intergenic
GGTGGGGACATGCAATTACG+CGG 0.728350 5:-99327808 MsG0580029606.01.T01:CDS
GTTGAGAATGAAGTTGACGG+TGG 0.771797 5:-99327874 MsG0580029606.01.T01:CDS
GCGACCGGAGATGATCACTG+GGG 0.824046 5:-99327940 MsG0580029606.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATACATGTTAATTTTTTTAA+GGG - Chr5:99325119-99325138 MsG0580029606.01.T01:intron 10.0%
!!! TTTTAAACAAATTTTTTCTA+TGG - Chr5:99326050-99326069 MsG0580029606.01.T01:intron 10.0%
!! AAAACTAAGAATACAAAATT+AGG + Chr5:99327145-99327164 None:intergenic 15.0%
!! AAATAGTGGTATAAATAAAA+AGG + Chr5:99325883-99325902 None:intergenic 15.0%
!! AAATTTGAATTAAACAAACT+TGG - Chr5:99324900-99324919 MsG0580029606.01.T01:intron 15.0%
!! ATATTCAAGGATTAAAATAA+AGG + Chr5:99323713-99323732 None:intergenic 15.0%
!! CTATAAAAGATATGATAATA+TGG + Chr5:99326861-99326880 None:intergenic 15.0%
!! GTACAAAAATTATTATTTAG+TGG - Chr5:99323234-99323253 MsG0580029606.01.T01:intron 15.0%
!!! AAAAATTTGTTTAAAAGTTG+AGG + Chr5:99326046-99326065 None:intergenic 15.0%
!!! AATTGAATTTTGGTATATTT+AGG - Chr5:99327564-99327583 MsG0580029606.01.T01:intron 15.0%
!!! ATTGAATTTTGGTATATTTA+GGG - Chr5:99327565-99327584 MsG0580029606.01.T01:intron 15.0%
!!! GATACATGTTAATTTTTTTA+AGG - Chr5:99325118-99325137 MsG0580029606.01.T01:intron 15.0%
!!! TATCTTTTATAGATCAATTT+TGG - Chr5:99326869-99326888 MsG0580029606.01.T01:CDS 15.0%
!!! TTAGTAATATTGTTTTCAAA+AGG + Chr5:99326343-99326362 None:intergenic 15.0%
!! AAAGATAAAATAAAGTCAGA+TGG - Chr5:99325460-99325479 MsG0580029606.01.T01:intron 20.0%
!! AAAGTAACATAATAGGATTT+GGG + Chr5:99327012-99327031 None:intergenic 20.0%
!! AAGATATGATAATATGGAAA+AGG + Chr5:99326855-99326874 None:intergenic 20.0%
!! ACAAATCAAAGTAACATAAT+AGG + Chr5:99327019-99327038 None:intergenic 20.0%
!! ATAAAAAAACTTTGACATCA+CGG - Chr5:99326285-99326304 MsG0580029606.01.T01:intron 20.0%
!! ATCAAAATTGTGAAATTGTT+TGG + Chr5:99323678-99323697 None:intergenic 20.0%
!! ATTAGATTACTACTATTATC+AGG - Chr5:99324277-99324296 MsG0580029606.01.T01:intron 20.0%
!! CCTTGAATATGATAAAAATT+GGG - Chr5:99323723-99323742 MsG0580029606.01.T01:intron 20.0%
!! CTGTTTATTATTGTAAACAT+TGG - Chr5:99327239-99327258 MsG0580029606.01.T01:intron 20.0%
!! CTTGAATATGATAAAAATTG+GGG - Chr5:99323724-99323743 MsG0580029606.01.T01:intron 20.0%
!! TAAAATTGTTTATCCAATCA+AGG + Chr5:99325391-99325410 None:intergenic 20.0%
!! TAATAGCTTAAAAAACAACT+TGG + Chr5:99323562-99323581 None:intergenic 20.0%
!! TAATATACTAGCATTCTTAT+GGG + Chr5:99326903-99326922 None:intergenic 20.0%
!! TCCTTGAATATGATAAAAAT+TGG - Chr5:99323722-99323741 MsG0580029606.01.T01:intron 20.0%
!! TGAAATTCATATACTTCATT+TGG + Chr5:99324732-99324751 None:intergenic 20.0%
!! TTAATGCTTTCAAATTGTAA+CGG - Chr5:99325693-99325712 MsG0580029606.01.T01:intron 20.0%
!! TTTACAATAATAAACAGCAA+TGG + Chr5:99327236-99327255 None:intergenic 20.0%
!!! ATATATACAATTTGGTTTTG+TGG - Chr5:99327832-99327851 MsG0580029606.01.T01:CDS 20.0%
!!! ATCATGGCTTTTAAAAAATA+TGG - Chr5:99326187-99326206 MsG0580029606.01.T01:intron 20.0%
!!! ATTTTGGCATTATGTATATT+CGG - Chr5:99323811-99323830 MsG0580029606.01.T01:intron 20.0%
!!! CAAGTTGATTTAATGATATT+AGG - Chr5:99325315-99325334 MsG0580029606.01.T01:intron 20.0%
!!! CTTTTAAAAAATATGGTCTT+GGG - Chr5:99326194-99326213 MsG0580029606.01.T01:intron 20.0%
!!! GAAGACTTAAAATTGAATTT+TGG - Chr5:99327554-99327573 MsG0580029606.01.T01:intron 20.0%
!!! GTTTACACCTTATTTTTTTA+GGG - Chr5:99323210-99323229 MsG0580029606.01.T01:intron 20.0%
!!! TAAGTCTTCAAAATCATTTT+TGG + Chr5:99327543-99327562 None:intergenic 20.0%
!!! TATTATTTAGTGGAATTTTG+TGG - Chr5:99323244-99323263 MsG0580029606.01.T01:intron 20.0%
!!! TGTTTACACCTTATTTTTTT+AGG - Chr5:99323209-99323228 MsG0580029606.01.T01:intron 20.0%
!!! TTTCAAAAGGTTTTAAAGAA+AGG + Chr5:99326330-99326349 None:intergenic 20.0%
!!! TTTTAAAAAATATGGTCTTG+GGG - Chr5:99326195-99326214 MsG0580029606.01.T01:intron 20.0%
!!! TTTTATCATGCATCATATTT+CGG - Chr5:99324495-99324514 MsG0580029606.01.T01:intron 20.0%
! AAAAGACCAATAACAACAAA+TGG + Chr5:99323885-99323904 None:intergenic 25.0%
! AAAGATGATGAAATGTTCTT+AGG - Chr5:99324234-99324253 MsG0580029606.01.T01:intron 25.0%
! AAGCTATTATAGATAGCTTA+TGG - Chr5:99323573-99323592 MsG0580029606.01.T01:intron 25.0%
! AAGGAACACAAGTAATATTA+CGG + Chr5:99325730-99325749 None:intergenic 25.0%
! AAGGGAAAATAATCTATGTT+TGG + Chr5:99327700-99327719 None:intergenic 25.0%
! CAAAGTAACATAATAGGATT+TGG + Chr5:99327013-99327032 None:intergenic 25.0%
! CTAATATACTAGCATTCTTA+TGG + Chr5:99326904-99326923 None:intergenic 25.0%
! CTCAACTGATATATACAATT+TGG - Chr5:99327824-99327843 MsG0580029606.01.T01:CDS 25.0%
! GAATATTTGTAACAGATTGA+AGG + Chr5:99326601-99326620 None:intergenic 25.0%
! TCATAGATTTATGCAAATCA+TGG - Chr5:99326171-99326190 MsG0580029606.01.T01:intron 25.0%
! TCTAAACTCTAAATGACTAA+AGG - Chr5:99326670-99326689 MsG0580029606.01.T01:intron 25.0%
! TGATACTGGAAATTCATTAA+AGG - Chr5:99325919-99325938 MsG0580029606.01.T01:intron 25.0%
! TGTAGTTAAAATTATGACCA+TGG - Chr5:99325212-99325231 MsG0580029606.01.T01:intron 25.0%
! TGTGATTTCAAAAATCACAA+AGG + Chr5:99325749-99325768 None:intergenic 25.0%
! TGTTATCCTTTGCAAAAAAA+CGG - Chr5:99324195-99324214 MsG0580029606.01.T01:intron 25.0%
! TTCATATTAGTGTGTATCAA+AGG + Chr5:99324769-99324788 None:intergenic 25.0%
! TTGTACTCCCTAAAAAAATA+AGG + Chr5:99323220-99323239 None:intergenic 25.0%
! TTTAATGAATTTCCAGTATC+AGG + Chr5:99325920-99325939 None:intergenic 25.0%
! TTTACAAATATCCTTACCAA+TGG - Chr5:99326644-99326663 MsG0580029606.01.T01:intron 25.0%
!! ACATTACTCTTTTACAACAT+TGG - Chr5:99325802-99325821 MsG0580029606.01.T01:intron 25.0%
!! AGATATGTGATTGTGTATTT+TGG - Chr5:99323795-99323814 MsG0580029606.01.T01:intron 25.0%
!! AGTTCTTTATAAGTTAGCTT+TGG - Chr5:99323034-99323053 MsG0580029606.01.T01:intron 25.0%
!! CCCAATTTTTATCATATTCA+AGG + Chr5:99323726-99323745 None:intergenic 25.0%
!! CTAAAGAAGCATAGTTAATT+CGG - Chr5:99324955-99324974 MsG0580029606.01.T01:intron 25.0%
!! GCATGTTTAAATTCAGTTTT+TGG - Chr5:99327512-99327531 MsG0580029606.01.T01:intron 25.0%
!! TATAGCTAAAAAGTGTGTAA+GGG + Chr5:99327718-99327737 None:intergenic 25.0%
!! TTATAGCTAAAAAGTGTGTA+AGG + Chr5:99327719-99327738 None:intergenic 25.0%
!! TTTAAAAAATATGGTCTTGG+GGG - Chr5:99326196-99326215 MsG0580029606.01.T01:intron 25.0%
!!! AAGTATTTACATTTTGCTGT+AGG - Chr5:99324040-99324059 MsG0580029606.01.T01:intron 25.0%
!!! AAGTTTTTTTATCGCAATTG+AGG + Chr5:99326277-99326296 None:intergenic 25.0%
!!! AGTATTTACATTTTGCTGTA+GGG - Chr5:99324041-99324060 MsG0580029606.01.T01:intron 25.0%
!!! ATTTGTTGTTATTGGTCTTT+TGG - Chr5:99323884-99323903 MsG0580029606.01.T01:intron 25.0%
!!! CAATTTCACAATTTTGATAG+CGG - Chr5:99323680-99323699 MsG0580029606.01.T01:intron 25.0%
!!! GCTTTTAAAAAATATGGTCT+TGG - Chr5:99326193-99326212 MsG0580029606.01.T01:intron 25.0%
!!! TTGATAATGTACCAACATTT+AGG + Chr5:99326816-99326835 None:intergenic 25.0%
!!! TTTTTGAAATCACAGTTTGA+AGG - Chr5:99325755-99325774 MsG0580029606.01.T01:intron 25.0%
AACGTATTATTTCCTCTCAT+GGG + Chr5:99326502-99326521 None:intergenic 30.0%
AAGAAAGGATACTGTTTCAA+AGG + Chr5:99323062-99323081 None:intergenic 30.0%
AATGTTGGTACATTATCAAG+TGG - Chr5:99326817-99326836 MsG0580029606.01.T01:CDS 30.0%
ACAATAACTTCAGTGATACA+TGG - Chr5:99326380-99326399 MsG0580029606.01.T01:intron 30.0%
ACCACTATTTACTATTGTAG+CGG - Chr5:99325893-99325912 MsG0580029606.01.T01:intron 30.0%
ACTGGAAATTCATTAAAGGA+CGG - Chr5:99325923-99325942 MsG0580029606.01.T01:intron 30.0%
ATAACAACAAATGGAGTCTT+TGG + Chr5:99323876-99323895 None:intergenic 30.0%
CCAAAGCAAAGAAAAAAGAA+TGG + Chr5:99323954-99323973 None:intergenic 30.0%
CTTCAATACTGATACCAAAT+TGG - Chr5:99324799-99324818 MsG0580029606.01.T01:intron 30.0%
GAAGAAACCTAATATCATAC+TGG + Chr5:99325634-99325653 None:intergenic 30.0%
GAGTAAAAACAAATCTCAGA+TGG + Chr5:99325854-99325873 None:intergenic 30.0%
TAACGTATTATTTCCTCTCA+TGG + Chr5:99326503-99326522 None:intergenic 30.0%
TAAGCCAATAATGAGAACTA+TGG + Chr5:99327945-99327964 None:intergenic 30.0%
TGGACATATATGTTACTATC+CGG - Chr5:99325822-99325841 MsG0580029606.01.T01:intron 30.0%
TTAATTCAAATTTGCGACCA+GGG + Chr5:99324893-99324912 None:intergenic 30.0%
TTAGTATGTTAACTAAGCCA+TGG + Chr5:99325232-99325251 None:intergenic 30.0%
TTAGTGTGTTTATTCTACAG+TGG + Chr5:99327767-99327786 None:intergenic 30.0%
TTGAGTGTAAACATCATGTT+TGG + Chr5:99327643-99327662 None:intergenic 30.0%
TTGGTATTCATACACCAATT+TGG + Chr5:99324816-99324835 None:intergenic 30.0%
TTTAATTCAAATTTGCGACC+AGG + Chr5:99324894-99324913 None:intergenic 30.0%
! AAAGTATTCTCTTTGATTCC+AGG - Chr5:99327188-99327207 MsG0580029606.01.T01:intron 30.0%
! ACGTTAGTATTATCTGAAAC+AGG - Chr5:99326517-99326536 MsG0580029606.01.T01:intron 30.0%
! CGTCTTTTTATCAGAAATGT+CGG - Chr5:99323175-99323194 MsG0580029606.01.T01:intron 30.0%
! CGTTAGTATTATCTGAAACA+GGG - Chr5:99326518-99326537 MsG0580029606.01.T01:intron 30.0%
! TCTTATTTGAGCTTGTCTAT+TGG + Chr5:99323651-99323670 None:intergenic 30.0%
! TTAAAAAATATGGTCTTGGG+GGG - Chr5:99326197-99326216 MsG0580029606.01.T01:intron 30.0%
! TTCAATTCCAATTTTGTCTC+AGG - Chr5:99324591-99324610 MsG0580029606.01.T01:intron 30.0%
! TTGCCTGTTATGGAATTTTT+GGG - Chr5:99325292-99325311 MsG0580029606.01.T01:intron 30.0%
! TTGTTGTTGTATGATCATGT+TGG + Chr5:99324415-99324434 None:intergenic 30.0%
! TTTAGAGTTTAGACATCCAT+TGG + Chr5:99326663-99326682 None:intergenic 30.0%
!! AAGACTCCATTTGTTGTTAT+TGG - Chr5:99323876-99323895 MsG0580029606.01.T01:intron 30.0%
!! CTCCTGTCAATTATTTTTCT+CGG - Chr5:99325017-99325036 MsG0580029606.01.T01:intron 30.0%
!! TCCTGTCAATTATTTTTCTC+GGG - Chr5:99325018-99325037 MsG0580029606.01.T01:intron 30.0%
!! TTTTTCATTTTTCCCATGAG+AGG - Chr5:99326487-99326506 MsG0580029606.01.T01:intron 30.0%
!!! ACAATACCGTTTTTTTGCAA+AGG + Chr5:99324204-99324223 None:intergenic 30.0%
!!! CATATGTTTTAAGAGATTGC+AGG - Chr5:99325659-99325678 MsG0580029606.01.T01:intron 30.0%
!!! CCATTCTTTTTTCTTTGCTT+TGG - Chr5:99323951-99323970 MsG0580029606.01.T01:intron 30.0%
!!! GAGATTTGTTTTTACTCTCT+AGG - Chr5:99325857-99325876 MsG0580029606.01.T01:intron 30.0%
AAAATTGGGGAGTTGAAATG+AGG - Chr5:99323737-99323756 MsG0580029606.01.T01:intron 35.0%
AAACCATGATGTGTGAATCA+TGG + Chr5:99323425-99323444 None:intergenic 35.0%
AAATGTAAACACCTCTCAGT+TGG + Chr5:99323312-99323331 None:intergenic 35.0%
AAATTGGGGAGTTGAAATGA+GGG - Chr5:99323738-99323757 MsG0580029606.01.T01:intron 35.0%
AACATCATGTTTGGAGGTAA+AGG + Chr5:99327634-99327653 None:intergenic 35.0%
AAGACTATTTACGCCTTGAT+TGG - Chr5:99325375-99325394 MsG0580029606.01.T01:intron 35.0%
AAGCATACCTGAAAATGTTG+AGG + Chr5:99327324-99327343 None:intergenic 35.0%
AATCGCAATTATCTGTTCGA+TGG - Chr5:99327100-99327119 MsG0580029606.01.T01:intron 35.0%
AATGTAAACACCTCTCAGTT+GGG + Chr5:99323311-99323330 None:intergenic 35.0%
AATTATCTGTTCGATGGGAT+TGG - Chr5:99327106-99327125 MsG0580029606.01.T01:intron 35.0%
ACAACAAAAGAATGCATGGT+CGG + Chr5:99326429-99326448 None:intergenic 35.0%
ACAGGATGAAACATATCCAA+GGG + Chr5:99324853-99324872 None:intergenic 35.0%
ACATAATTACCTCTGATGGA+TGG - Chr5:99323352-99323371 MsG0580029606.01.T01:intron 35.0%
AGTGTAAACATCATGTTTGG+AGG + Chr5:99327640-99327659 None:intergenic 35.0%
AGTTTAGACATCCATTGGTA+AGG + Chr5:99326658-99326677 None:intergenic 35.0%
ATAACTTCAGTGATACATGG+TGG - Chr5:99326383-99326402 MsG0580029606.01.T01:intron 35.0%
ATCGCAATTATCTGTTCGAT+GGG - Chr5:99327101-99327120 MsG0580029606.01.T01:intron 35.0%
ATGATGTGTGAATCATGGTA+GGG + Chr5:99323420-99323439 None:intergenic 35.0%
ATGATTCACACATCATGGTT+TGG - Chr5:99323424-99323443 MsG0580029606.01.T01:intron 35.0%
ATTATCTGTTCGATGGGATT+GGG - Chr5:99327107-99327126 MsG0580029606.01.T01:intron 35.0%
CATATATGTTACTATCCGGT+AGG - Chr5:99325826-99325845 MsG0580029606.01.T01:intron 35.0%
CCATTCTTGTCAAAACTATG+GGG - Chr5:99326739-99326758 MsG0580029606.01.T01:intron 35.0%
CCCATTCTTGTCAAAACTAT+GGG - Chr5:99326738-99326757 MsG0580029606.01.T01:intron 35.0%
CTGATAGTTGCTAAACTTCT+TGG - Chr5:99325254-99325273 MsG0580029606.01.T01:intron 35.0%
GAATACGCCAGTATGATATT+AGG - Chr5:99325624-99325643 MsG0580029606.01.T01:intron 35.0%
GATTTCCTGTTGTAAAACGT+TGG - Chr5:99325777-99325796 MsG0580029606.01.T01:intron 35.0%
GGAAATAACCATATCTGATC+CGG + Chr5:99322800-99322819 None:intergenic 35.0%
GGATGCAAACAAAAAACTGA+AGG - Chr5:99326115-99326134 MsG0580029606.01.T01:intron 35.0%
GTAACATAATAGGATTTGGG+TGG + Chr5:99327009-99327028 None:intergenic 35.0%
GTGAACACATAGATGGATAT+TGG + Chr5:99327863-99327882 None:intergenic 35.0%
GTTTGAATAGCTGTTAGAGA+AGG - Chr5:99323278-99323297 MsG0580029606.01.T01:intron 35.0%
TACAGGATGAAACATATCCA+AGG + Chr5:99324854-99324873 None:intergenic 35.0%
TATAAAGTCAACCACCTACT+TGG - Chr5:99325047-99325066 MsG0580029606.01.T01:intron 35.0%
TCATTATCAGTTGCCTGTTA+TGG - Chr5:99325282-99325301 MsG0580029606.01.T01:intron 35.0%
TCCCATTCTTGTCAAAACTA+TGG - Chr5:99326737-99326756 MsG0580029606.01.T01:intron 35.0%
TCCCGAGAAAAATAATTGAC+AGG + Chr5:99325022-99325041 None:intergenic 35.0%
TCCGCTACAATAGTAAATAG+TGG + Chr5:99325897-99325916 None:intergenic 35.0%
TCGAACAACAAAAGAATGCA+TGG + Chr5:99326433-99326452 None:intergenic 35.0%
TCGAACATAATTACCTCTGA+TGG - Chr5:99323348-99323367 MsG0580029606.01.T01:intron 35.0%
TCGTTTACCTGAGACAAAAT+TGG + Chr5:99324601-99324620 None:intergenic 35.0%
TCTATAGCCTCAATGTTACA+AGG - Chr5:99327048-99327067 MsG0580029606.01.T01:intron 35.0%
TCTGACAAACAATCTCACAA+GGG - Chr5:99325602-99325621 MsG0580029606.01.T01:intron 35.0%
TCTTGTATCAGCAATTCTCT+CGG - Chr5:99324564-99324583 MsG0580029606.01.T01:intron 35.0%
TGATTCACACATCATGGTTT+GGG - Chr5:99323425-99323444 MsG0580029606.01.T01:intron 35.0%
TGGATATGTTTCATCCTGTA+TGG - Chr5:99324854-99324873 MsG0580029606.01.T01:intron 35.0%
TTGAAGTGTGAACACATAGA+TGG + Chr5:99327870-99327889 None:intergenic 35.0%
TTGCCCAAAAATTCCATAAC+AGG + Chr5:99325298-99325317 None:intergenic 35.0%
TTGGCTTACTCATTTATGCA+TGG - Chr5:99327957-99327976 MsG0580029606.01.T01:CDS 35.0%
! ACAAACTAGTGTTGAACCTA+CGG + Chr5:99324354-99324373 None:intergenic 35.0%
! GTTGCCTGTTATGGAATTTT+TGG - Chr5:99325291-99325310 MsG0580029606.01.T01:intron 35.0%
! TAGTATTATCTGAAACAGGG+AGG - Chr5:99326521-99326540 MsG0580029606.01.T01:intron 35.0%
! TAGTTTGGTAGTTGACTGAA+GGG + Chr5:99326769-99326788 None:intergenic 35.0%
! TCTTTTCTCTAATGTCGTGT+CGG - Chr5:99323127-99323146 MsG0580029606.01.T01:intron 35.0%
! TGTTTCCAACGTTTTACAAC+AGG + Chr5:99325785-99325804 None:intergenic 35.0%
! TTTGCAGGAGCTAATCTTTT+TGG - Chr5:99326094-99326113 MsG0580029606.01.T01:intron 35.0%
!! TTGATTTGTCAAAGCGTTTG+AGG + Chr5:99326981-99327000 None:intergenic 35.0%
!! TTTTAAGGGATGCCATGTTT+TGG - Chr5:99325133-99325152 MsG0580029606.01.T01:intron 35.0%
!!! CCCATAGTTTTGACAAGAAT+GGG + Chr5:99326741-99326760 None:intergenic 35.0%
!!! TGTTGTTATTGGTCTTTTGG+AGG - Chr5:99323887-99323906 MsG0580029606.01.T01:intron 35.0%
AAATCTCAGATGGTTCCTAC+CGG + Chr5:99325844-99325863 None:intergenic 40.0%
AAGGATCGAGATTCAAACTC+TGG + Chr5:99326953-99326972 None:intergenic 40.0%
ACACTTCAATTGCCATACCT+TGG - Chr5:99327881-99327900 MsG0580029606.01.T01:CDS 40.0%
ATGTATCACTGACCTTGCAA+CGG + Chr5:99325105-99325124 None:intergenic 40.0%
CAACAAAAGAATGCATGGTC+GGG + Chr5:99326428-99326447 None:intergenic 40.0%
CACAACTATCCACAATACCA+AGG + Chr5:99326243-99326262 None:intergenic 40.0%
CAGATTGAAGGATACCTACT+TGG + Chr5:99326589-99326608 None:intergenic 40.0%
CATAAGAGTTGACAACGAAC+AGG + Chr5:99326556-99326575 None:intergenic 40.0%
CATCTCATCAGTAACAATGC+CGG + Chr5:99323844-99323863 None:intergenic 40.0%
CATCTTGCCTTGTAACATTG+AGG + Chr5:99327058-99327077 None:intergenic 40.0%
CATGATGTGTGAATCATGGT+AGG + Chr5:99323421-99323440 None:intergenic 40.0%
CATTGTGATCCTTGGTATTG+TGG - Chr5:99326231-99326250 MsG0580029606.01.T01:intron 40.0%
CTACCAAACTACCTCAAAGA+TGG - Chr5:99326778-99326797 MsG0580029606.01.T01:intron 40.0%
CTACCATGATTCACACATCA+TGG - Chr5:99323419-99323438 MsG0580029606.01.T01:intron 40.0%
CTCTGACAAACAATCTCACA+AGG - Chr5:99325601-99325620 MsG0580029606.01.T01:intron 40.0%
CTGTTCGTTGTCAACTCTTA+TGG - Chr5:99326554-99326573 MsG0580029606.01.T01:intron 40.0%
CTTGGTATTGTGGATAGTTG+TGG - Chr5:99326241-99326260 MsG0580029606.01.T01:intron 40.0%
CTTGTATCAGCAATTCTCTC+GGG - Chr5:99324565-99324584 MsG0580029606.01.T01:intron 40.0%
GACGTTGAGAATGAAGTTGA+CGG - Chr5:99322833-99322852 MsG0580029606.01.T01:CDS 40.0%
GAGAATTTGCCACACTAGAA+AGG + Chr5:99325000-99325019 None:intergenic 40.0%
GGAAATTCATTAAAGGACGG+TGG - Chr5:99325926-99325945 MsG0580029606.01.T01:intron 40.0%
GGATGCTTTCTTGTCACAAT+TGG - Chr5:99325068-99325087 MsG0580029606.01.T01:intron 40.0%
TATGCATGGACTCCTTCAAA+TGG - Chr5:99327971-99327990 MsG0580029606.01.T01:CDS 40.0%
TATGGATCTGCATTCCAAGT+AGG - Chr5:99326572-99326591 MsG0580029606.01.T01:intron 40.0%
TCTTTGATTCCAGGATGTGA+CGG - Chr5:99327197-99327216 MsG0580029606.01.T01:intron 40.0%
TTGACAAGAATGGGAGAAGA+AGG + Chr5:99326732-99326751 None:intergenic 40.0%
! AAACTAGTGTTGAACCTACG+GGG + Chr5:99324352-99324371 None:intergenic 40.0%
! AAAGCCTTTTCCCACTAAGT+GGG - Chr5:99324440-99324459 MsG0580029606.01.T01:intron 40.0%
! AAGATTAGCTCCTGCAAAGT+CGG + Chr5:99326092-99326111 None:intergenic 40.0%
! AGTTTGGTAGTTGACTGAAG+GGG + Chr5:99326768-99326787 None:intergenic 40.0%
! ATATCCAAGGGCTTCTAGTT+TGG + Chr5:99324841-99324860 None:intergenic 40.0%
! CAAACTAGTGTTGAACCTAC+GGG + Chr5:99324353-99324372 None:intergenic 40.0%
! CAAAGCGTTTGAGGAGTTAA+AGG + Chr5:99326972-99326991 None:intergenic 40.0%
! CAGTTTGTGAGTGTCACTAA+GGG - Chr5:99325164-99325183 MsG0580029606.01.T01:intron 40.0%
! CTCTGATGGATGGAACTTAT+GGG - Chr5:99323362-99323381 MsG0580029606.01.T01:intron 40.0%
! GTAGTTTGGTAGTTGACTGA+AGG + Chr5:99326770-99326789 None:intergenic 40.0%
! TAAAGGACGGTGGCTTATTT+TGG - Chr5:99325936-99325955 MsG0580029606.01.T01:intron 40.0%
! TCAGTTTGTGAGTGTCACTA+AGG - Chr5:99325163-99325182 MsG0580029606.01.T01:intron 40.0%
! TGTCTTGCCTCAACATTTTC+AGG - Chr5:99327314-99327333 MsG0580029606.01.T01:intron 40.0%
! TTAGCATTTTCCGACTTTGC+AGG - Chr5:99326079-99326098 MsG0580029606.01.T01:intron 40.0%
!! TGACAAGAAAGCATCCAAGT+AGG + Chr5:99325064-99325083 None:intergenic 40.0%
!!! CCCCATAGTTTTGACAAGAA+TGG + Chr5:99326742-99326761 None:intergenic 40.0%
AACTCCAAACTAGAAGCCCT+TGG - Chr5:99324834-99324853 MsG0580029606.01.T01:intron 45.0%
ACTCCTTCAAATGGCTCTTC+AGG - Chr5:99327980-99327999 MsG0580029606.01.T01:CDS 45.0%
ACTGAGCAACCACCAAAACA+TGG + Chr5:99325148-99325167 None:intergenic 45.0%
AGAATGAAGTTGACGGTGGT+TGG - Chr5:99322840-99322859 MsG0580029606.01.T01:CDS 45.0%
AGGTTTGAATCCCAACTGAG+AGG - Chr5:99323298-99323317 MsG0580029606.01.T01:intron 45.0%
ATAAACAGCAATGGCAGCAG+AGG + Chr5:99327227-99327246 None:intergenic 45.0%
CAACAGCTGAAGAGATCTTC+AGG + Chr5:99327289-99327308 None:intergenic 45.0%
CACGCAGATGACAGCAATTA+AGG + Chr5:99324662-99324681 None:intergenic 45.0%
CACTTAGTGGGAAAAGGCTT+TGG + Chr5:99324441-99324460 None:intergenic 45.0%
CCATAAGTTCCATCCATCAG+AGG + Chr5:99323364-99323383 None:intergenic 45.0%
CGAGATTCAAACTCTGGTGA+CGG + Chr5:99326947-99326966 None:intergenic 45.0%
CTTGCACAGCTTTCCACTTT+CGG - Chr5:99323083-99323102 MsG0580029606.01.T01:intron 45.0%
GAAAGCTGTGCAAGGAAGAA+AGG + Chr5:99323077-99323096 None:intergenic 45.0%
GAAGACAGTAACCTTCAGCA+CGG + Chr5:99326005-99326024 None:intergenic 45.0%
GAAGAGATGAAGCAACACCA+AGG + Chr5:99327901-99327920 None:intergenic 45.0%
GATGAAGCAACACCAAGGTA+TGG + Chr5:99327896-99327915 None:intergenic 45.0%
GCATGTTGATGTGAATGCTG+AGG - Chr5:99327796-99327815 MsG0580029606.01.T01:CDS 45.0%
GGGGCCATAGTTCTCATTAT+TGG - Chr5:99327938-99327957 MsG0580029606.01.T01:CDS 45.0%
GTGTAGTTGTTACCGTTGCA+AGG - Chr5:99325090-99325109 MsG0580029606.01.T01:intron 45.0%
GTTGAGAATGAAGTTGACGG+TGG - Chr5:99322836-99322855 MsG0580029606.01.T01:CDS 45.0%
TGTCGAGCTCATCTATGTGT+AGG - Chr5:99324927-99324946 MsG0580029606.01.T01:intron 45.0%
TTCATTCTCAACGTCCTCGT+CGG + Chr5:99322828-99322847 None:intergenic 45.0%
TTGCACAGCTTTCCACTTTC+GGG - Chr5:99323084-99323103 MsG0580029606.01.T01:intron 45.0%
TTGCAGTGTGTGCATGTGTA+TGG - Chr5:99327422-99327441 MsG0580029606.01.T01:intron 45.0%
! AAGCCTTTTCCCACTAAGTG+GGG - Chr5:99324441-99324460 MsG0580029606.01.T01:intron 45.0%
! ATTTTTACATCCCTCCCCGT+AGG - Chr5:99324335-99324354 MsG0580029606.01.T01:intron 45.0%
! CAAAGCCTTTTCCCACTAAG+TGG - Chr5:99324439-99324458 MsG0580029606.01.T01:intron 45.0%
! CCTCTGATGGATGGAACTTA+TGG - Chr5:99323361-99323380 MsG0580029606.01.T01:intron 45.0%
! GAGAACATGACTAGCCATAC+AGG + Chr5:99324871-99324890 None:intergenic 45.0%
! GCAGCTTGCTTCCTAAATGT+TGG - Chr5:99326802-99326821 MsG0580029606.01.T01:CDS 45.0%
! GTGAATGAAGTACCCGAAAG+TGG + Chr5:99323099-99323118 None:intergenic 45.0%
! TGTTGCAGACCTTTCTAGTG+TGG - Chr5:99324988-99325007 MsG0580029606.01.T01:intron 45.0%
!! AAGGGCTTCTAGTTTGGAGT+TGG + Chr5:99324835-99324854 None:intergenic 45.0%
!! CAAGAAAGCATCCAAGTAGG+TGG + Chr5:99325061-99325080 None:intergenic 45.0%
!! GCACCATCTTTGAGGTAGTT+TGG + Chr5:99326784-99326803 None:intergenic 45.0%
!! TAAGGGATGCCATGTTTTGG+TGG - Chr5:99325136-99325155 MsG0580029606.01.T01:intron 45.0%
!! TATTGTAGCGGACCTGATAC+TGG - Chr5:99325905-99325924 MsG0580029606.01.T01:intron 45.0%
AGATGATCACTGGGGATTGC+CGG - Chr5:99322778-99322797 MsG0580029606.01.T01:CDS 50.0%
AGCAAGCTGCACCATCTTTG+AGG + Chr5:99326792-99326811 None:intergenic 50.0%
ATCTCTTCCCACAGGCTTTG+TGG - Chr5:99327913-99327932 MsG0580029606.01.T01:CDS 50.0%
ATGTATATTCGGCACCGTGC+CGG - Chr5:99323822-99323841 MsG0580029606.01.T01:intron 50.0%
CAATCCCCAGTGATCATCTC+CGG + Chr5:99322777-99322796 None:intergenic 50.0%
CACATAGATGAGCTCGACAG+AGG + Chr5:99324926-99324945 None:intergenic 50.0%
CATCAGTAACAATGCCGGCA+CGG + Chr5:99323839-99323858 None:intergenic 50.0%
CGAAAGTGGAAAGCTGTGCA+AGG + Chr5:99323085-99323104 None:intergenic 50.0%
CGTGTCGGACACATGATACT+CGG - Chr5:99323142-99323161 MsG0580029606.01.T01:intron 50.0%
GACATGCAATTACGCGGTGA+AGG - Chr5:99322908-99322927 MsG0580029606.01.T01:intron 50.0%
GCAATTACGCGGTGAAGGAT+GGG - Chr5:99322913-99322932 MsG0580029606.01.T01:intron 50.0%
GCACCTGAAGAGCCATTTGA+AGG + Chr5:99327986-99328005 None:intergenic 50.0%
GTTGCTTCATCTCTTCCCAC+AGG - Chr5:99327905-99327924 MsG0580029606.01.T01:CDS 50.0%
TCAGGTGCTTCCTTCTCAGA+GGG - Chr5:99327998-99328017 MsG0580029606.01.T01:CDS 50.0%
TCTTGCTGCTGCAACTGGAA+TGG - Chr5:99323911-99323930 MsG0580029606.01.T01:intron 50.0%
TGCAATTACGCGGTGAAGGA+TGG - Chr5:99322912-99322931 MsG0580029606.01.T01:intron 50.0%
TTCAGGTGCTTCCTTCTCAG+AGG - Chr5:99327997-99328016 MsG0580029606.01.T01:CDS 50.0%
! ATGGCTAGTCATGTTCTCCC+TGG - Chr5:99324873-99324892 MsG0580029606.01.T01:intron 50.0%
! CTTTTCCCACTAAGTGGGGT+CGG - Chr5:99324445-99324464 MsG0580029606.01.T01:intron 50.0%
! GAAGAGTGTGAATAGACCGG+CGG - Chr5:99322962-99322981 MsG0580029606.01.T01:intron 50.0%
! GAGTGTAGGGAATGATGACG+TGG - Chr5:99322935-99322954 MsG0580029606.01.T01:intron 50.0%
! GGGGAAGAGTGTGAATAGAC+CGG - Chr5:99322959-99322978 MsG0580029606.01.T01:intron 50.0%
! GTTATTTCCATCAGCCGACG+AGG - Chr5:99322811-99322830 MsG0580029606.01.T01:CDS 50.0%
! TAGTGTTGAACCTACGGGGA+GGG + Chr5:99324348-99324367 None:intergenic 50.0%
! TGTAGGGAATGATGACGTGG+CGG - Chr5:99322938-99322957 MsG0580029606.01.T01:intron 50.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr5:99324453-99324472 MsG0580029606.01.T01:intron 55.0%
AGCAGCAGATACCGTGCTGA+AGG - Chr5:99325991-99326010 MsG0580029606.01.T01:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr5:99324454-99324473 None:intergenic 55.0%
CACGGTCGCATTGTGATCCT+TGG - Chr5:99326223-99326242 MsG0580029606.01.T01:intron 55.0%
CGACCCCACTTAGTGGGAAA+AGG + Chr5:99324447-99324466 None:intergenic 55.0%
GGGGATTGCCGGATCAGATA+TGG - Chr5:99322789-99322808 MsG0580029606.01.T01:CDS 55.0%
GGTGGGGACATGCAATTACG+CGG - Chr5:99322902-99322921 MsG0580029606.01.T01:intron 55.0%
TCAGCACGGTATCTGCTGCT+TGG + Chr5:99325991-99326010 None:intergenic 55.0%
TCTGTTCGATGGGATTGGGC+TGG - Chr5:99327111-99327130 MsG0580029606.01.T01:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr5:99324453-99324472 None:intergenic 55.0%
! CGGTGAAGGATGGGAGTGTA+GGG - Chr5:99322922-99322941 MsG0580029606.01.T01:intron 55.0%
! CTAGGTGGAACCCTCTGAGA+AGG + Chr5:99328011-99328030 None:intergenic 55.0%
! CTAGTGTTGAACCTACGGGG+AGG + Chr5:99324349-99324368 None:intergenic 55.0%
! GTAGGGAATGATGACGTGGC+GGG - Chr5:99322939-99322958 MsG0580029606.01.T01:intron 55.0%
! TAGGGAATGATGACGTGGCG+GGG - Chr5:99322940-99322959 MsG0580029606.01.T01:intron 55.0%
! TATGGTCTTGGGGGGAGTCA+CGG - Chr5:99326205-99326224 MsG0580029606.01.T01:intron 55.0%
! TCTGAAACAGGGAGGCTCTG+TGG - Chr5:99326529-99326548 MsG0580029606.01.T01:intron 55.0%
! TTCCCACAGGCTTTGTGGCA+GGG - Chr5:99327918-99327937 MsG0580029606.01.T01:CDS 55.0%
!! GCGACGGTTGTAATGGGTGT+CGG - Chr5:99323005-99323024 MsG0580029606.01.T01:intron 55.0%
CAGTGATCATCTCCGGTCGC+CGG + Chr5:99322770-99322789 None:intergenic 60.0%
GAGGCTCTTGCTGCTGCAAC+TGG - Chr5:99323906-99323925 MsG0580029606.01.T01:intron 60.0%
GAGTGTGAATAGACCGGCGG+AGG - Chr5:99322965-99322984 MsG0580029606.01.T01:intron 60.0%
GCAACTGGAATGGCTGCAGG+AGG - Chr5:99323921-99323940 MsG0580029606.01.T01:intron 60.0%
GCGACCGGAGATGATCACTG+GGG - Chr5:99322770-99322789 MsG0580029606.01.T01:CDS 60.0%
GCTGCAACTGGAATGGCTGC+AGG - Chr5:99323918-99323937 MsG0580029606.01.T01:intron 60.0%
GGCGACCGGAGATGATCACT+GGG - Chr5:99322769-99322788 MsG0580029606.01.T01:CDS 60.0%
TGTGAATAGACCGGCGGAGG+TGG - Chr5:99322968-99322987 MsG0580029606.01.T01:intron 60.0%
! CTTCCCACAGGCTTTGTGGC+AGG - Chr5:99327917-99327936 MsG0580029606.01.T01:CDS 60.0%
! GCGGTGAAGGATGGGAGTGT+AGG - Chr5:99322921-99322940 MsG0580029606.01.T01:intron 60.0%
! TCAACGTCCTCGTCGGCTGA+TGG + Chr5:99322821-99322840 None:intergenic 60.0%
! TCCCACAGGCTTTGTGGCAG+GGG - Chr5:99327919-99327938 MsG0580029606.01.T01:CDS 60.0%
AACGCCGGCAGGCAGTGCAA+TGG + Chr5:99322742-99322761 None:intergenic 65.0%
ACGGCGGAGGAAGGAGAAGG+TGG - Chr5:99322884-99322903 MsG0580029606.01.T01:intron 65.0%
AGTGCAATGGCTCCGGCGTC+TGG + Chr5:99322729-99322748 None:intergenic 65.0%
CATTACAACCGTCGCCGCCG+CGG + Chr5:99323000-99323019 None:intergenic 65.0%
CGGCGACCGGAGATGATCAC+TGG - Chr5:99322768-99322787 MsG0580029606.01.T01:CDS 65.0%
CGGCGGAGGAAGGAGAAGGT+GGG - Chr5:99322885-99322904 MsG0580029606.01.T01:intron 65.0%
GAATAGACCGGCGGAGGTGG+CGG - Chr5:99322971-99322990 MsG0580029606.01.T01:intron 65.0%
GCCCCTGCCACAAAGCCTGT+GGG + Chr5:99327923-99327942 None:intergenic 65.0%
GCGGCGGCGACGGTTGTAAT+GGG - Chr5:99322999-99323018 MsG0580029606.01.T01:intron 65.0%
GGAGCCATTGCACTGCCTGC+CGG - Chr5:99322735-99322754 MsG0580029606.01.T01:CDS 65.0%
GGCAGGCAGTGCAATGGCTC+CGG + Chr5:99322736-99322755 None:intergenic 65.0%
GGCGGAGGAAGGAGAAGGTG+GGG - Chr5:99322886-99322905 MsG0580029606.01.T01:intron 65.0%
TGCCTGCCGGCGTTAGACTC+CGG - Chr5:99322748-99322767 MsG0580029606.01.T01:CDS 65.0%
! AGAGGCGCACCGTCACATCC+TGG + Chr5:99327209-99327228 None:intergenic 65.0%
CGCACGGCGGAGGAAGGAGA+AGG - Chr5:99322881-99322900 MsG0580029606.01.T01:intron 70.0%
CGCGGCGGCGACGGTTGTAA+TGG - Chr5:99322998-99323017 MsG0580029606.01.T01:intron 70.0%
CGGCGTTAGACTCCGGCGAC+CGG - Chr5:99322755-99322774 MsG0580029606.01.T01:CDS 70.0%
CGGTCGCCGGAGTCTAACGC+CGG + Chr5:99322757-99322776 None:intergenic 70.0%
GGCCCCTGCCACAAAGCCTG+TGG + Chr5:99327924-99327943 None:intergenic 70.0%
TTGACGGTGGTTGGCGCCGC+CGG - Chr5:99322849-99322868 MsG0580029606.01.T01:CDS 70.0%
CGCCGGAGTCTAACGCCGGC+AGG + Chr5:99322753-99322772 None:intergenic 75.0%
CTCCGGCGTCTGGACACCGC+CGG + Chr5:99322719-99322738 None:intergenic 75.0%
GTGGTTGGCGCCGCCGGAGA+CGG - Chr5:99322855-99322874 MsG0580029606.01.T01:CDS 75.0%
TGCCGGCGGTGTCCAGACGC+CGG - Chr5:99322714-99322733 MsG0580029606.01.T01:CDS 75.0%
! TAGACCGGCGGAGGTGGCGG+TGG - Chr5:99322974-99322993 MsG0580029606.01.T01:intron 75.0%
! GTTGGCGCCGCCGGAGACGG+CGG - Chr5:99322858-99322877 MsG0580029606.01.T01:intron 80.0%
! CCGCCGGAGACGGCGGCGCA+CGG - Chr5:99322865-99322884 MsG0580029606.01.T01:intron 85.0%
! CCGCCGTGCGCCGCCGTCTC+CGG + Chr5:99322871-99322890 None:intergenic 85.0%
! CCGGAGACGGCGGCGCACGG+CGG - Chr5:99322868-99322887 MsG0580029606.01.T01:intron 85.0%
! CCGTGCGCCGCCGTCTCCGG+CGG + Chr5:99322868-99322887 None:intergenic 85.0%
! CGGCGGCGCACGGCGGAGGA+AGG - Chr5:99322875-99322894 MsG0580029606.01.T01:intron 85.0%
! GAGACGGCGGCGCACGGCGG+AGG - Chr5:99322871-99322890 MsG0580029606.01.T01:intron 85.0%
! GCGGCCACCGCCACCTCCGC+CGG + Chr5:99322981-99323000 None:intergenic 85.0%
!! GGAGGTGGCGGTGGCCGCGG+CGG - Chr5:99322983-99323002 MsG0580029606.01.T01:intron 85.0%
!! GGCGGAGGTGGCGGTGGCCG+CGG - Chr5:99322980-99322999 MsG0580029606.01.T01:intron 85.0%
! GGCGGTGGCCGCGGCGGCGA+CGG - Chr5:99322989-99323008 MsG0580029606.01.T01:intron 90.0%
Chromosome Type Strat End Strand Name
Chr5 gene 99322702 99328030 99322702 ID=MsG0580029606.01;Name=MsG0580029606.01
Chr5 mRNA 99322702 99328030 99322702 ID=MsG0580029606.01.T01;Parent=MsG0580029606.01;Name=MsG0580029606.01.T01;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|1|1|3|0|240
Chr5 exon 99327627 99328030 99327627 ID=MsG0580029606.01.T01:exon:26182;Parent=MsG0580029606.01.T01
Chr5 exon 99326790 99326935 99326790 ID=MsG0580029606.01.T01:exon:26181;Parent=MsG0580029606.01.T01
Chr5 exon 99322702 99322874 99322702 ID=MsG0580029606.01.T01:exon:26180;Parent=MsG0580029606.01.T01
Chr5 CDS 99327627 99328030 99327627 ID=MsG0580029606.01.T01:cds;Parent=MsG0580029606.01.T01
Chr5 CDS 99326790 99326935 99326790 ID=MsG0580029606.01.T01:cds;Parent=MsG0580029606.01.T01
Chr5 CDS 99322702 99322874 99322702 ID=MsG0580029606.01.T01:cds;Parent=MsG0580029606.01.T01
Gene Sequence

>MsG0580029606.01.T01

ATGGCATCATTCTGCCGGCGGTGTCCAGACGCCGGAGCCATTGCACTGCCTGCCGGCGTTAGACTCCGGCGACCGGAGATGATCACTGGGGATTGCCGGATCAGATATGGTTATTTCCATCAGCCGACGAGGACGTTGAGAATGAAGTTGACGGTGGTTGGCGCCGCCGGAGACGGCGGCGCACGGCGGAGGAAGGAGAAGGTGGGGACATGCAATTACGCGGTGAAGGATGGGAGTGTAGGGAATGATGACGTGGCGGGGAAGAGTGTGAATAGACCGGCGGAGGTGGCGGTGGCCGCGGCGGCGACGGTTGTAATGGGTGTCGGAAACAGAGTTCTTTATAAGTTAGCTTTGGTTCCTTTGAAACAGTATCCTTTCTTCCTTGCACAGCTTTCCACTTTCGGATATGTGATTGTGTATTTTGGCATTATGTATATTCGGCACCGTGCCGGCATTGTTACTGATGAGATGTTAAGTTTGCCAAAGACTCCATTTGTTGTTATTGGTCTTTTGGAGGCTCTTGCTGCTGCAACTGGAATGGCTGCAGGAGTTCCAATATCCATCTATGTGTTCACACTTCAATTGCCATACCTTGGTGTTGCTTCATCTCTTCCCACAGGCTTTGTGGCAGGGGCCATAGTTCTCATTATTGGCTTACTCATTTATGCATGGACTCCTTCAAATGGCTCTTCAGGTGCTTCCTTCTCAGAGGGTTCCACCTAG
Protein sequence

>MsG0580029606.01.T01

MASFCRRCPDAGAIALPAGVRLRRPEMITGDCRIRYGYFHQPTRTLRMKLTVVGAAGDGGARRRKEKVGTCNYAVKDGSVGNDDVAGKSVNRPAEVAVAAAATVVMGVGNRVLYKLALVPLKQYPFFLAQLSTFGYVIVYFGIMYIRHRAGIVTDEMLSLPKTPFVVIGLLEALAAATGMAAGVPISIYVFTLQLPYLGVASSLPTGFVAGAIVLIIGLLIYAWTPSNGSSGASFSEGST*