AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580030070.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030070.01.T01 MTR_5g097180 95.175 456 20 2 3 457 1 455 0.0 887
MsG0580030070.01.T01 MTR_4g084710 81.718 454 80 2 6 456 2 455 0.0 746
MsG0580030070.01.T01 MTR_4g057585 32.759 406 256 7 40 435 92 490 1.42e-71 234
MsG0580030070.01.T01 MTR_4g057595 32.266 406 258 7 40 435 93 491 4.80e-70 231
MsG0580030070.01.T01 MTR_1g094155 31.579 418 267 6 28 434 74 483 1.09e-69 230
MsG0580030070.01.T01 MTR_4g057600 33.571 420 254 8 33 438 84 492 6.63e-69 228
MsG0580030070.01.T01 MTR_2g095750 33.090 411 255 8 40 438 96 498 9.77e-68 225
MsG0580030070.01.T01 MTR_2g095730 32.542 421 259 9 34 438 84 495 9.86e-67 222
MsG0580030070.01.T01 MTR_1g050545 32.178 404 248 7 46 434 85 477 4.54e-64 215
MsG0580030070.01.T01 MTR_4g057570 31.655 417 262 7 34 435 79 487 2.77e-63 213
MsG0580030070.01.T01 MTR_1g021010 31.540 409 243 11 46 436 92 481 5.35e-53 185
MsG0580030070.01.T01 MTR_1g020090 30.882 408 244 10 46 436 106 492 2.86e-52 184
MsG0580030070.01.T01 MTR_2g095710 31.311 412 250 11 40 438 90 481 9.69e-51 179
MsG0580030070.01.T01 MTR_1g021020 30.049 406 252 11 46 436 94 482 1.25e-49 176
MsG0580030070.01.T01 MTR_3g079560 31.490 416 247 12 46 444 94 488 1.26e-49 176
MsG0580030070.01.T01 MTR_3g079590 31.296 409 244 12 46 435 94 484 4.67e-49 175
MsG0580030070.01.T01 MTR_3g079570 31.643 414 235 15 46 435 95 484 4.38e-47 169
MsG0580030070.01.T01 MTR_0003s0560 29.976 417 239 14 47 435 90 481 1.59e-43 160
MsG0580030070.01.T01 MTR_3g034290 29.950 404 250 14 47 431 91 480 2.52e-43 159
MsG0580030070.01.T01 MTR_3g079620 30.166 421 254 14 46 444 94 496 4.61e-43 159
MsG0580030070.01.T01 MTR_3g079600 30.260 423 258 14 46 448 92 497 8.59e-43 158
MsG0580030070.01.T01 MTR_1g095540 28.606 416 267 11 46 440 49 455 2.05e-42 156
MsG0580030070.01.T01 MTR_3g079630 28.954 411 259 11 46 435 94 492 4.36e-42 156
MsG0580030070.01.T01 MTR_1g095560 28.504 421 261 13 46 440 49 455 3.42e-40 150
MsG0580030070.01.T01 MTR_4g075150 28.404 426 259 13 46 440 50 460 6.33e-39 147
MsG0580030070.01.T01 MTR_2g062980 27.518 407 250 13 46 424 56 445 1.05e-38 146
MsG0580030070.01.T01 MTR_4g075150 28.472 432 253 15 46 440 50 462 2.14e-38 145
MsG0580030070.01.T01 MTR_2g081620 26.366 421 259 12 46 435 57 457 3.12e-38 145
MsG0580030070.01.T01 MTR_2g062990 26.847 406 254 14 46 424 56 445 2.72e-37 142
MsG0580030070.01.T01 MTR_4g122960 26.168 428 265 12 46 435 55 469 2.91e-37 142
MsG0580030070.01.T01 MTR_4g122950 25.290 431 267 12 46 435 55 471 4.42e-37 142
MsG0580030070.01.T01 MTR_4g056520 26.961 408 245 10 64 431 55 449 1.00e-36 140
MsG0580030070.01.T01 MTR_3g090130 26.905 420 274 12 46 440 44 455 2.11e-36 140
MsG0580030070.01.T01 MTR_3g090150 27.674 430 260 15 46 440 49 462 1.45e-35 137
MsG0580030070.01.T01 MTR_8g011350 25.934 455 249 16 42 424 41 479 1.71e-35 137
MsG0580030070.01.T01 MTR_2g018630 26.291 426 272 11 45 440 52 465 1.81e-35 137
MsG0580030070.01.T01 MTR_7g013790 27.907 430 258 16 46 440 51 463 3.01e-35 136
MsG0580030070.01.T01 MTR_2g063000 26.456 412 250 14 46 424 55 446 3.69e-35 136
MsG0580030070.01.T01 MTR_1g095560 26.786 448 266 14 46 440 49 487 6.67e-35 136
MsG0580030070.01.T01 MTR_2g449850 27.543 403 253 14 48 424 56 445 9.93e-35 135
MsG0580030070.01.T01 MTR_3g498755 27.316 421 263 14 46 435 31 439 1.57e-34 134
MsG0580030070.01.T01 MTR_1g040370 27.612 402 251 13 46 440 46 414 1.87e-34 133
MsG0580030070.01.T01 MTR_7g021130 26.984 441 282 11 26 435 20 451 2.12e-34 134
MsG0580030070.01.T01 MTR_2g018590 24.661 442 267 15 45 440 48 469 3.80e-34 133
MsG0580030070.01.T01 MTR_5g072570 25.943 424 267 11 46 435 45 455 4.47e-34 133
MsG0580030070.01.T01 MTR_3g034290 29.878 328 203 12 47 356 91 409 5.17e-34 132
MsG0580030070.01.T01 MTR_2g018600 24.091 440 271 14 45 440 49 469 1.03e-33 132
MsG0580030070.01.T01 MTR_8g099930 26.606 436 272 14 38 440 41 461 7.96e-33 130
MsG0580030070.01.T01 MTR_0003s0560 40.000 180 96 6 47 221 90 262 8.93e-33 127
MsG0580030070.01.T01 MTR_4g089155 26.411 443 263 14 31 431 54 475 9.91e-33 130
MsG0580030070.01.T01 MTR_4g021535 27.215 474 278 19 8 435 9 461 1.80e-32 129
MsG0580030070.01.T01 MTR_2g012850 26.995 426 260 14 46 436 51 460 2.53e-32 128
MsG0580030070.01.T01 MTR_2g012860 27.594 424 244 15 46 427 57 459 2.90e-32 128
MsG0580030070.01.T01 MTR_4g021510 28.285 449 245 20 40 435 40 464 4.26e-32 127
MsG0580030070.01.T01 MTR_8g011350 25.576 434 236 15 42 404 41 458 4.92e-32 127
MsG0580030070.01.T01 MTR_3g434850 26.752 471 281 20 10 440 7 453 5.82e-32 127
MsG0580030070.01.T01 MTR_4g021520 26.591 440 264 14 40 435 41 465 1.42e-31 126
MsG0580030070.01.T01 MTR_3g100420 25.792 442 258 15 45 435 69 491 6.87e-31 124
MsG0580030070.01.T01 MTR_2g009200 25.866 433 257 15 40 435 29 434 8.12e-30 120
MsG0580030070.01.T01 MTR_4g021530 26.151 478 277 20 8 435 14 465 5.99e-29 119
MsG0580030070.01.T01 MTR_4g021500 25.977 435 254 16 45 435 490 900 7.58e-29 120
MsG0580030070.01.T01 MTR_4g021500 25.792 442 267 15 40 436 41 466 5.21e-28 118
MsG0580030070.01.T01 MTR_4g021490 26.067 445 260 18 40 435 41 465 4.06e-28 116
MsG0580030070.01.T01 MTR_4g021500 25.792 442 267 15 40 436 41 466 5.05e-28 118
MsG0580030070.01.T01 MTR_4g021500 26.253 419 255 17 45 435 490 882 9.07e-28 117
MsG0580030070.01.T01 MTR_7g080180 35.870 184 102 7 46 219 44 221 3.96e-27 113
MsG0580030070.01.T01 MTR_7g080180 35.870 184 102 7 46 219 44 221 4.87e-27 114
MsG0580030070.01.T01 MTR_2g084530 26.998 463 274 18 12 431 6 447 6.76e-27 112
MsG0580030070.01.T01 MTR_4g021520 26.551 403 238 13 40 399 41 428 8.71e-27 112
MsG0580030070.01.T01 MTR_3g045770 24.299 428 273 14 42 434 37 448 1.08e-26 112
MsG0580030070.01.T01 MTR_2g063000 23.758 463 264 17 3 424 1 415 1.77e-26 111
MsG0580030070.01.T01 MTR_7g051430 32.701 211 126 7 18 217 14 219 4.50e-26 110
MsG0580030070.01.T01 MTR_7g051430 32.701 211 126 7 18 217 14 219 1.91e-25 108
MsG0580030070.01.T01 MTR_4g021535 24.385 447 278 15 8 435 9 414 3.87e-25 107
MsG0580030070.01.T01 MTR_2g018630 24.148 352 234 9 113 440 18 360 1.77e-21 95.9
MsG0580030070.01.T01 MTR_1g102130 22.500 440 239 16 46 440 107 489 2.83e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030070.01.T01 AT1G15000 58.670 421 165 5 37 455 28 441 1.65e-175 499
MsG0580030070.01.T01 AT3G10410 33.659 410 246 7 40 435 95 492 1.06e-70 233
MsG0580030070.01.T01 AT5G22980 32.506 403 254 6 46 438 100 494 5.72e-68 225
MsG0580030070.01.T01 AT3G45010 31.358 405 258 5 46 438 103 499 9.73e-67 222
MsG0580030070.01.T01 AT3G52000 30.467 407 251 10 47 435 81 473 8.35e-51 179
MsG0580030070.01.T01 AT3G52010 29.833 419 242 16 47 435 82 478 2.91e-45 164
MsG0580030070.01.T01 AT3G63470 30.807 409 240 14 47 431 98 487 4.43e-43 159
MsG0580030070.01.T01 AT2G05850 30.383 418 242 17 47 435 81 478 7.73e-43 158
MsG0580030070.01.T01 AT2G35780 27.529 425 258 12 46 440 46 450 2.71e-41 153
MsG0580030070.01.T01 AT3G07990 30.097 412 246 15 46 431 50 445 7.53e-41 152
MsG0580030070.01.T01 AT2G35770 28.362 409 242 12 46 424 54 441 1.64e-40 151
MsG0580030070.01.T01 AT1G43780 26.013 469 299 12 13 440 8 469 2.64e-40 150
MsG0580030070.01.T01 AT3G52020 27.229 415 258 16 47 435 96 492 2.96e-39 148
MsG0580030070.01.T01 AT1G73270 26.190 420 268 12 45 444 48 445 3.06e-39 147
MsG0580030070.01.T01 AT3G12203 26.374 455 290 13 3 435 1 432 1.00e-37 143
MsG0580030070.01.T01 AT3G12203 27.163 416 263 12 37 435 19 411 1.46e-37 142
MsG0580030070.01.T01 AT1G73270 25.962 416 266 12 45 440 48 441 1.49e-37 142
MsG0580030070.01.T01 AT5G23210 26.517 445 260 13 46 440 67 494 9.78e-37 141
MsG0580030070.01.T01 AT5G08260 27.404 416 251 15 58 435 68 470 1.16e-36 140
MsG0580030070.01.T01 AT5G36180 25.366 410 266 11 45 435 48 436 1.40e-36 140
MsG0580030070.01.T01 AT1G73300 24.634 410 269 11 45 435 48 436 2.31e-36 139
MsG0580030070.01.T01 AT1G73300 24.634 410 269 11 45 435 48 436 2.31e-36 139
MsG0580030070.01.T01 AT1G73290 25.537 419 267 13 36 435 41 433 2.54e-36 139
MsG0580030070.01.T01 AT3G12203 27.411 394 249 11 59 435 1 374 4.94e-36 137
MsG0580030070.01.T01 AT2G23000 24.694 409 274 12 45 435 40 432 1.31e-35 137
MsG0580030070.01.T01 AT2G23000 24.694 409 274 12 45 435 40 432 1.31e-35 137
MsG0580030070.01.T01 AT2G22990 24.634 410 271 13 45 435 38 428 1.36e-35 137
MsG0580030070.01.T01 AT1G73310 25.547 411 264 12 45 435 48 436 1.50e-35 137
MsG0580030070.01.T01 AT4G12910 28.414 454 237 21 42 424 45 481 2.17e-35 137
MsG0580030070.01.T01 AT1G61130 27.447 470 281 19 2 431 1 450 5.28e-35 136
MsG0580030070.01.T01 AT1G73280 24.324 444 285 13 22 435 14 436 9.48e-35 135
MsG0580030070.01.T01 AT2G22920 24.757 412 268 12 45 435 40 430 9.76e-35 134
MsG0580030070.01.T01 AT3G17180 27.570 428 259 16 46 435 55 469 1.05e-34 135
MsG0580030070.01.T01 AT2G23010 24.939 409 273 11 45 435 40 432 2.08e-34 134
MsG0580030070.01.T01 AT1G33540 25.114 438 269 11 45 440 44 464 3.99e-34 133
MsG0580030070.01.T01 AT1G11080 27.335 439 241 16 46 431 66 479 1.78e-33 132
MsG0580030070.01.T01 AT1G11080 27.335 439 241 16 46 431 66 479 1.95e-33 132
MsG0580030070.01.T01 AT1G73310 25.258 388 250 10 45 413 48 414 2.20e-33 130
MsG0580030070.01.T01 AT1G33540 25.057 435 267 11 48 440 4 421 2.81e-33 130
MsG0580030070.01.T01 AT1G73290 25.521 384 243 11 36 401 41 399 3.25e-33 130
MsG0580030070.01.T01 AT4G30810 25.598 418 268 12 46 435 54 456 3.79e-33 131
MsG0580030070.01.T01 AT2G22920 24.934 377 243 10 45 401 40 396 7.41e-33 129
MsG0580030070.01.T01 AT2G22990 24.474 380 251 11 45 406 38 399 8.06e-33 129
MsG0580030070.01.T01 AT4G30610 28.111 434 269 18 38 440 40 461 9.02e-33 129
MsG0580030070.01.T01 AT3G12230 26.341 410 262 13 45 435 42 430 9.11e-33 129
MsG0580030070.01.T01 AT3G12240 25.854 410 264 14 45 435 43 431 1.02e-32 129
MsG0580030070.01.T01 AT2G23010 24.450 409 275 11 45 435 40 432 1.10e-32 129
MsG0580030070.01.T01 AT4G15100 26.207 435 257 14 46 435 60 475 1.29e-32 129
MsG0580030070.01.T01 AT2G22990 24.474 380 251 11 45 406 38 399 1.67e-32 129
MsG0580030070.01.T01 AT2G22980 23.659 410 269 12 45 435 41 425 1.68e-32 128
MsG0580030070.01.T01 AT2G22970 24.634 410 269 13 45 435 40 428 1.82e-32 128
MsG0580030070.01.T01 AT2G27920 26.139 417 239 14 64 431 56 452 5.48e-32 127
MsG0580030070.01.T01 AT2G33530 26.291 426 260 16 46 435 49 456 1.18e-31 126
MsG0580030070.01.T01 AT3G10450 23.472 409 275 9 45 435 44 432 2.09e-31 125
MsG0580030070.01.T01 AT3G02110 28.297 417 246 15 46 424 53 454 3.50e-31 125
MsG0580030070.01.T01 AT5G23210 26.735 389 223 12 46 384 67 443 4.69e-31 125
MsG0580030070.01.T01 AT3G12220 25.298 419 268 15 37 435 37 430 9.13e-31 123
MsG0580030070.01.T01 AT3G10450 23.399 406 273 9 48 435 4 389 1.03e-30 122
MsG0580030070.01.T01 AT2G24010 25.891 421 270 13 46 440 46 450 1.65e-30 123
MsG0580030070.01.T01 AT1G28110 26.683 416 269 12 46 435 47 452 2.09e-30 123
MsG0580030070.01.T01 AT1G28110 26.683 416 269 12 46 435 47 452 2.09e-30 123
MsG0580030070.01.T01 AT4G12910 27.934 426 224 20 42 399 45 455 2.56e-30 122
MsG0580030070.01.T01 AT3G56540 38.235 170 95 5 47 210 96 261 3.74e-30 118
MsG0580030070.01.T01 AT2G22980 23.907 389 249 12 37 406 36 396 3.81e-30 121
MsG0580030070.01.T01 AT2G22980 23.601 411 264 13 37 428 36 415 5.18e-30 121
MsG0580030070.01.T01 AT3G12220 25.245 408 263 14 48 435 15 400 7.83e-30 120
MsG0580030070.01.T01 AT2G22970 24.211 380 250 11 45 406 40 399 2.27e-29 119
MsG0580030070.01.T01 AT2G22970 24.211 380 250 11 45 406 40 399 2.63e-29 119
MsG0580030070.01.T01 AT2G24000 27.561 410 255 16 46 424 46 444 3.67e-29 119
MsG0580030070.01.T01 AT2G22990 23.704 405 272 14 45 435 38 419 4.44e-29 119
MsG0580030070.01.T01 AT3G17180 27.157 394 237 15 46 402 55 435 2.28e-28 117
MsG0580030070.01.T01 AT2G12480 25.250 400 270 15 46 435 47 427 9.82e-28 115
MsG0580030070.01.T01 AT3G25420 33.152 184 113 4 42 219 40 219 1.08e-27 115
MsG0580030070.01.T01 AT5G42240 25.882 425 276 14 46 440 48 463 1.15e-27 115
MsG0580030070.01.T01 AT2G12480 24.372 398 274 13 46 435 47 425 1.26e-27 114
MsG0580030070.01.T01 AT3G10450 23.545 378 251 9 45 404 44 401 1.28e-27 114
MsG0580030070.01.T01 AT2G12480 24.528 424 267 13 46 435 47 451 2.65e-27 114
MsG0580030070.01.T01 AT3G12220 24.121 398 234 11 45 435 42 378 3.72e-27 112
MsG0580030070.01.T01 AT5G23210 25.123 406 240 12 85 440 8 399 3.83e-27 112
MsG0580030070.01.T01 AT3G10450 23.467 375 249 9 48 404 4 358 9.79e-27 111
MsG0580030070.01.T01 AT5G36180 24.850 334 220 9 115 435 19 334 1.34e-26 110
MsG0580030070.01.T01 AT5G36180 24.850 334 220 9 115 435 19 334 1.34e-26 110
MsG0580030070.01.T01 AT5G23210 24.938 405 240 12 86 440 8 398 1.65e-26 111
MsG0580030070.01.T01 AT5G42230 24.700 417 259 14 46 424 44 443 4.31e-26 110
MsG0580030070.01.T01 AT5G42230 24.700 417 259 14 46 424 44 443 4.31e-26 110
MsG0580030070.01.T01 AT2G12480 24.311 399 274 14 46 435 47 426 5.61e-26 110
MsG0580030070.01.T01 AT5G09640 24.359 468 294 15 12 435 9 460 7.93e-26 110
MsG0580030070.01.T01 AT2G24010 24.771 436 271 14 46 440 46 465 8.29e-26 110
MsG0580030070.01.T01 AT2G27920 25.189 397 230 13 83 431 3 380 2.40e-25 107
MsG0580030070.01.T01 AT1G73280 22.754 334 227 9 115 435 19 334 1.32e-23 101
MsG0580030070.01.T01 AT1G73290 28.111 217 143 4 36 246 41 250 3.20e-23 100
MsG0580030070.01.T01 AT2G24010 30.213 235 140 7 46 260 17 247 3.70e-23 100
MsG0580030070.01.T01 AT5G36180 24.834 302 198 7 115 404 19 303 5.74e-23 99.8
MsG0580030070.01.T01 AT1G73280 24.545 330 216 8 45 356 48 362 1.20e-22 99.8
MsG0580030070.01.T01 AT1G73310 24.359 312 205 8 115 413 19 312 1.24e-22 98.6
MsG0580030070.01.T01 AT1G73280 22.936 327 221 9 122 435 1 309 1.70e-22 98.2
MsG0580030070.01.T01 AT2G22990 23.242 327 222 11 122 435 4 314 3.13e-22 97.4
MsG0580030070.01.T01 AT2G22920 30.337 178 114 3 45 216 40 213 4.08e-22 97.1
MsG0580030070.01.T01 AT5G36180 25.084 299 195 7 115 401 19 300 1.21e-21 96.3
MsG0580030070.01.T01 AT2G24010 23.427 461 271 15 46 440 17 461 1.92e-21 97.1
MsG0580030070.01.T01 AT5G23210 24.928 349 203 11 86 384 8 347 8.23e-21 94.0
MsG0580030070.01.T01 AT2G22990 22.630 327 224 11 122 435 4 314 1.27e-20 92.8
MsG0580030070.01.T01 AT2G22980 24.096 332 213 10 45 356 41 353 3.94e-20 92.0
MsG0580030070.01.T01 AT5G22960 32.934 167 87 4 34 197 21 165 6.10e-20 87.8
MsG0580030070.01.T01 AT2G22970 27.979 193 121 4 45 231 40 220 7.13e-20 90.5
MsG0580030070.01.T01 AT2G27920 23.932 351 206 11 129 431 48 385 6.27e-17 82.8
MsG0580030070.01.T01 AT2G22980 22.483 298 196 9 122 406 4 279 7.67e-17 81.3

Find 114 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTACAAATGTTGTGGTTT+TGG 0.238119 5:+106205804 MsG0580030070.01.T01:CDS
CATCGTCCTATTTATATTAC+TGG 0.245739 5:+106205091 MsG0580030070.01.T01:CDS
CCACTTCTCATTTGGCTTCA+AGG 0.279137 5:+106204815 MsG0580030070.01.T01:CDS
CACAAACTCCACTTCTCATT+TGG 0.289156 5:+106204807 MsG0580030070.01.T01:CDS
AGGGAGATTTGGAAGGTAAA+TGG 0.303899 5:+106205748 MsG0580030070.01.T01:CDS
AGAAATGTAGTAAAATTGTT+TGG 0.305716 5:+106205545 MsG0580030070.01.T01:CDS
AATGAAAAGTGTAAAGTATA+TGG 0.327632 5:+106205588 MsG0580030070.01.T01:CDS
AGTTAGTAGAGAGAAGGAAT+TGG 0.342651 5:+106205341 MsG0580030070.01.T01:CDS
TGAATGCTGAGAGGGAGATT+TGG 0.347779 5:+106205737 MsG0580030070.01.T01:CDS
CTCAAGCTATGATAGAAGAT+TGG 0.349871 5:+106205866 MsG0580030070.01.T01:CDS
CTTTCACCAGTAATATAAAT+AGG 0.353685 5:-106205097 None:intergenic
TGATGCGAGAAGCCGTGTTT+TGG 0.354009 5:+106205375 MsG0580030070.01.T01:CDS
GGTGCTTGGAATAGAATCTT+TGG 0.358892 5:+106204926 MsG0580030070.01.T01:CDS
AAAATATAGTATCCTATTGC+AGG 0.359314 5:-106205139 None:intergenic
ACAGTTTCATACCTCTTTCT+CGG 0.361030 5:+106204655 MsG0580030070.01.T01:CDS
TATGATAGAAGATTGGGTTT+TGG 0.369050 5:+106205873 MsG0580030070.01.T01:CDS
TGAAGCACTTCCCACAAAAT+CGG 0.376042 5:+106204703 MsG0580030070.01.T01:CDS
ATTTGGCTTCAAGGTGGCCC+TGG 0.377060 5:+106204824 MsG0580030070.01.T01:CDS
TTCATAGAATGTGTAGAAAA+TGG 0.377408 5:-106204759 None:intergenic
GGAAAGTATATTCCTGCAAT+AGG 0.387729 5:+106205127 MsG0580030070.01.T01:CDS
GGAAAGTTCCTTATGAAGAT+TGG 0.388838 5:+106205446 MsG0580030070.01.T01:CDS
CCGACCATGGAGGAGCATCC+AGG 0.404059 5:-106204842 None:intergenic
AAGCACCAGGGTTCGGTTGA+AGG 0.410766 5:-106204910 None:intergenic
GCTGATAATGCTTATTATGC+TGG 0.411854 5:+106205262 MsG0580030070.01.T01:CDS
TCAAGCTATGATAGAAGATT+GGG 0.412951 5:+106205867 MsG0580030070.01.T01:CDS
CTTGATAATCCCATTGGAAC+CGG 0.413486 5:+106204959 MsG0580030070.01.T01:CDS
GAAGTGGAAGTGGAAGTTAC+AGG 0.422934 5:-106204734 None:intergenic
TCCGCGACCGCGGTTTGATC+AGG 0.427352 5:-106205016 None:intergenic
TGTGTAGAAAATGGAGGAAG+TGG 0.442760 5:-106204750 None:intergenic
CTATTCCAAGCACCAGGGTT+CGG 0.444291 5:-106204917 None:intergenic
TTCAACCGAACCCTGGTGCT+TGG 0.445254 5:+106204912 MsG0580030070.01.T01:CDS
AGTTATTGAAGGAGGAGATG+AGG 0.447309 5:+106205617 MsG0580030070.01.T01:CDS
ATTACTGGTGAAAGCTATGC+TGG 0.449873 5:+106205106 MsG0580030070.01.T01:CDS
GCTGGTGTGGCAATTGGTAA+TGG 0.450136 5:+106205205 MsG0580030070.01.T01:CDS
TCAAGGTCAGCGCGATTTGA+GGG 0.450151 5:+106205651 MsG0580030070.01.T01:CDS
GAAAATGGAGGAAGTGGAAG+TGG 0.451895 5:-106204744 None:intergenic
ATAGGACGATGTTTGAAAAC+AGG 0.451910 5:-106205079 None:intergenic
GTTATTGAAGGAGGAGATGA+GGG 0.455839 5:+106205618 MsG0580030070.01.T01:CDS
TGAGTAACCATTTGAGTGAC+AGG 0.456839 5:-106205238 None:intergenic
GTGTTGTTCAAGTAGAGGCT+TGG 0.459918 5:+106205677 MsG0580030070.01.T01:CDS
GCCGAGGTGAAGAAGGCCTT+AGG 0.462397 5:+106205493 MsG0580030070.01.T01:CDS
GAAATGTAGTAAAATTGTTT+GGG 0.465315 5:+106205546 MsG0580030070.01.T01:CDS
AGATTAGATGATGATGAAGA+AGG 0.472655 5:+106204580 None:intergenic
CTACTTTGTATGATTATTCG+CGG 0.473157 5:+106205425 MsG0580030070.01.T01:CDS
TGTTGTTCAAGTAGAGGCTT+GGG 0.474736 5:+106205678 MsG0580030070.01.T01:CDS
GATCTGTTGCAAAACATGAC+AGG 0.477010 5:+106205397 MsG0580030070.01.T01:CDS
GAAGCACTTCCCACAAAATC+GGG 0.477743 5:+106204704 MsG0580030070.01.T01:CDS
GAATTCAAAGGTTGATCAGC+AGG 0.480763 5:-106205844 None:intergenic
AATTTAGCTGGTGTGGCAAT+TGG 0.481203 5:+106205199 MsG0580030070.01.T01:CDS
TACACTGAAGCCGGTTCCAA+TGG 0.482170 5:-106204969 None:intergenic
AGTGAACTGGTGACACGATA+AGG 0.483546 5:-106204884 None:intergenic
ACCTGATCAAACCGCGGTCG+CGG 0.493201 5:+106205015 MsG0580030070.01.T01:CDS
ATCAAGGTCAGCGCGATTTG+AGG 0.495996 5:+106205650 MsG0580030070.01.T01:CDS
AACAGACCCTGTCACTCAAA+TGG 0.500996 5:+106205231 MsG0580030070.01.T01:CDS
TATGGTAGAGAAGTTATTGA+AGG 0.501796 5:+106205606 MsG0580030070.01.T01:CDS
AGAAGTGGAGTTTGTGAGAG+AGG 0.513484 5:-106204800 None:intergenic
CCGAGGTGAAGAAGGCCTTA+GGG 0.514988 5:+106205494 MsG0580030070.01.T01:CDS
TTCGTAGAAGTTGCCGACCA+TGG 0.515110 5:-106204855 None:intergenic
AAGATTCTATTCCAAGCACC+AGG 0.515779 5:-106204923 None:intergenic
AGAGGTATGAAACTGTAAGA+AGG 0.518279 5:-106204648 None:intergenic
CTGTTGAGTTAGTAGAGAGA+AGG 0.518494 5:+106205335 MsG0580030070.01.T01:CDS
GCGACCGCGGTTTGATCAGG+TGG 0.521197 5:-106205013 None:intergenic
GAATATCGCCGAGGTGAAGA+AGG 0.524568 5:+106205486 MsG0580030070.01.T01:CDS
TGGCCCTGGATGCTCCTCCA+TGG 0.528212 5:+106204838 MsG0580030070.01.T01:CDS
ACACTGAAGCCGGTTCCAAT+GGG 0.529318 5:-106204968 None:intergenic
TTTGTGGGAAGTGCTTCATA+GGG 0.531819 5:-106204698 None:intergenic
GCAACCAACCAATCTTCATA+AGG 0.532058 5:-106205454 None:intergenic
CGACCATGGAGGAGCATCCA+GGG 0.532443 5:-106204841 None:intergenic
AGCACCAGGGTTCGGTTGAA+GGG 0.533711 5:-106204909 None:intergenic
ATGAGGGTGTTGTTGTATCA+AGG 0.538392 5:+106205634 MsG0580030070.01.T01:CDS
GGTAGAGAAGTTATTGAAGG+AGG 0.540034 5:+106205609 MsG0580030070.01.T01:CDS
AAGGTAAATGGAGAGGTAGC+TGG 0.540195 5:+106205760 MsG0580030070.01.T01:CDS
AGTTCCTTATGAAGATTGGT+TGG 0.542038 5:+106205450 MsG0580030070.01.T01:CDS
ACTGAAAGAGTGAATTTAGC+TGG 0.543185 5:+106205187 MsG0580030070.01.T01:CDS
TCAAGAAATTCTGTGTATGA+TGG 0.545978 5:+106205934 MsG0580030070.01.T01:CDS
AGTTTGTGAGAGAGGTGAAG+TGG 0.549455 5:-106204792 None:intergenic
ATCATAGCTTGAGAATTCAA+AGG 0.554096 5:-106205856 None:intergenic
CTTCTCATTTGGCTTCAAGG+TGG 0.555035 5:+106204818 MsG0580030070.01.T01:CDS
AGAATGTGAGACCGAGAAAG+AGG 0.555113 5:-106204666 None:intergenic
CGGTTGAAGGGTGAGTGAAC+TGG 0.558471 5:-106204897 None:intergenic
CGTTGAAGCTACACTGAAGC+CGG 0.564081 5:-106204978 None:intergenic
TGAGAGGCAGAAGAATGAGC+TGG 0.566827 5:+106205294 MsG0580030070.01.T01:CDS
GTCGGCAACTTCTACGAACT+CGG 0.567355 5:+106204860 MsG0580030070.01.T01:CDS
TGATCAGGTGGAATCTCTTG+CGG 0.569682 5:-106205001 None:intergenic
CCTTGAAGCCAAATGAGAAG+TGG 0.570775 5:-106204815 None:intergenic
ATCTGTTGCAAAACATGACA+GGG 0.572050 5:+106205398 MsG0580030070.01.T01:CDS
GGTCGGTGTTGTTCAAGTAG+AGG 0.576352 5:+106205672 MsG0580030070.01.T01:CDS
TGAAGACTATGAAGTGGGAA+GGG 0.578533 5:+106205701 MsG0580030070.01.T01:CDS
CCTGGATGCTCCTCCATGGT+CGG 0.578735 5:+106204842 MsG0580030070.01.T01:CDS
TTCATCAACATTCACCCCTA+AGG 0.579891 5:-106205509 None:intergenic
TGGAAGTGGAAGTTACAGGT+AGG 0.584581 5:-106204730 None:intergenic
GAAGTCACTTACAAATGTTG+TGG 0.585885 5:+106205798 MsG0580030070.01.T01:CDS
GTGAAGACTATGAAGTGGGA+AGG 0.588138 5:+106205700 MsG0580030070.01.T01:CDS
GGTCAGCGCGATTTGAGGGT+CGG 0.591816 5:+106205655 MsG0580030070.01.T01:CDS
TGCTGAGAGGGAGATTTGGA+AGG 0.592166 5:+106205741 MsG0580030070.01.T01:CDS
GATTTGGAAGGTAAATGGAG+AGG 0.595537 5:+106205753 MsG0580030070.01.T01:CDS
CTCACCCTTCAACCGAACCC+TGG 0.603960 5:+106204905 MsG0580030070.01.T01:CDS
CGAGGTGAAGAAGGCCTTAG+GGG 0.621823 5:+106205495 MsG0580030070.01.T01:CDS
ATAGAATGTGTAGAAAATGG+AGG 0.624076 5:-106204756 None:intergenic
TTGGGTGAAGACTATGAAGT+GGG 0.627868 5:+106205696 MsG0580030070.01.T01:CDS
CTTGGGTGAAGACTATGAAG+TGG 0.631263 5:+106205695 MsG0580030070.01.T01:CDS
AAGAGTGAATTTAGCTGGTG+TGG 0.636029 5:+106205192 MsG0580030070.01.T01:CDS
GAAAAGATGTTCCGCGACCG+CGG 0.639458 5:-106205026 None:intergenic
CCCTAAGGCCTTCTTCACCT+CGG 0.643912 5:-106205494 None:intergenic
ATGCTGGATTGATCAATGAG+AGG 0.656499 5:+106205278 MsG0580030070.01.T01:CDS
TTGTGGGAAGTGCTTCATAG+GGG 0.670126 5:-106204697 None:intergenic
TTTGCAACAGATCCAAAACA+CGG 0.674823 5:-106205387 None:intergenic
AGATTCTATTCCAAGCACCA+GGG 0.689174 5:-106204922 None:intergenic
GAGTAACCATTTGAGTGACA+GGG 0.711890 5:-106205237 None:intergenic
TCAGTTCTTGAATATCGCCG+AGG 0.712182 5:+106205477 MsG0580030070.01.T01:CDS
AATGAGTGTACTGATGAACA+AGG 0.751397 5:-106204618 None:intergenic
GTAGAAGTTGCCGACCATGG+AGG 0.752191 5:-106204852 None:intergenic
GATTCCACCTGATCAAACCG+CGG 0.760667 5:+106205009 MsG0580030070.01.T01:CDS
GAGTGTACTGATGAACAAGG+TGG 0.804627 5:-106204615 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATGTAGTAAAATTGTT+TGG + Chr5:106205545-106205564 MsG0580030070.01.T01:CDS 20.0%
!! GAAATGTAGTAAAATTGTTT+GGG + Chr5:106205546-106205565 MsG0580030070.01.T01:CDS 20.0%
!!! AATGAAAAGTGTAAAGTATA+TGG + Chr5:106205588-106205607 MsG0580030070.01.T01:CDS 20.0%
! AAAATATAGTATCCTATTGC+AGG - Chr5:106205142-106205161 None:intergenic 25.0%
! CTTTCACCAGTAATATAAAT+AGG - Chr5:106205100-106205119 None:intergenic 25.0%
! TTCATAGAATGTGTAGAAAA+TGG - Chr5:106204762-106204781 None:intergenic 25.0%
ATAGAATGTGTAGAAAATGG+AGG - Chr5:106204759-106204778 None:intergenic 30.0%
ATCATAGCTTGAGAATTCAA+AGG - Chr5:106205859-106205878 None:intergenic 30.0%
CATCGTCCTATTTATATTAC+TGG + Chr5:106205091-106205110 MsG0580030070.01.T01:CDS 30.0%
CTACTTTGTATGATTATTCG+CGG + Chr5:106205425-106205444 MsG0580030070.01.T01:CDS 30.0%
TAGCTGGTTATGTACAAAAA+TGG + Chr5:106205776-106205795 MsG0580030070.01.T01:CDS 30.0%
TATGGTAGAGAAGTTATTGA+AGG + Chr5:106205606-106205625 MsG0580030070.01.T01:CDS 30.0%
TCAAGAAATTCTGTGTATGA+TGG + Chr5:106205934-106205953 MsG0580030070.01.T01:CDS 30.0%
TCAAGCTATGATAGAAGATT+GGG + Chr5:106205867-106205886 MsG0580030070.01.T01:CDS 30.0%
TGGGATTATCAAGAAAAACA+AGG - Chr5:106204952-106204971 None:intergenic 30.0%
! ACTTACAAATGTTGTGGTTT+TGG + Chr5:106205804-106205823 MsG0580030070.01.T01:CDS 30.0%
! CTTACAAATGTTGTGGTTTT+GGG + Chr5:106205805-106205824 MsG0580030070.01.T01:CDS 30.0%
! TATGATAGAAGATTGGGTTT+TGG + Chr5:106205873-106205892 MsG0580030070.01.T01:CDS 30.0%
!! GTTTTTCTTGATAATCCCAT+TGG + Chr5:106204953-106204972 MsG0580030070.01.T01:CDS 30.0%
!! TTACAAATGTTGTGGTTTTG+GGG + Chr5:106205806-106205825 MsG0580030070.01.T01:CDS 30.0%
ACAGTTTCATACCTCTTTCT+CGG + Chr5:106204655-106204674 MsG0580030070.01.T01:CDS 35.0%
ACTGAAAGAGTGAATTTAGC+TGG + Chr5:106205187-106205206 MsG0580030070.01.T01:CDS 35.0%
AGTTAGTAGAGAGAAGGAAT+TGG + Chr5:106205341-106205360 MsG0580030070.01.T01:CDS 35.0%
AGTTCCTTATGAAGATTGGT+TGG + Chr5:106205450-106205469 MsG0580030070.01.T01:CDS 35.0%
ATAGGACGATGTTTGAAAAC+AGG - Chr5:106205082-106205101 None:intergenic 35.0%
ATCTGTTGCAAAACATGACA+GGG + Chr5:106205398-106205417 MsG0580030070.01.T01:CDS 35.0%
CTCAAGCTATGATAGAAGAT+TGG + Chr5:106205866-106205885 MsG0580030070.01.T01:CDS 35.0%
GAAGTCACTTACAAATGTTG+TGG + Chr5:106205798-106205817 MsG0580030070.01.T01:CDS 35.0%
GGAAAGTTCCTTATGAAGAT+TGG + Chr5:106205446-106205465 MsG0580030070.01.T01:CDS 35.0%
TTTGCAACAGATCCAAAACA+CGG - Chr5:106205390-106205409 None:intergenic 35.0%
! AATGAGTGTACTGATGAACA+AGG - Chr5:106204621-106204640 None:intergenic 35.0%
! AGAATTTTGTGAATGCTGAG+AGG + Chr5:106205728-106205747 MsG0580030070.01.T01:CDS 35.0%
! AGAGGTATGAAACTGTAAGA+AGG - Chr5:106204651-106204670 None:intergenic 35.0%
! ATCTTTTCGCTGCTATAACA+AGG + Chr5:106205041-106205060 MsG0580030070.01.T01:CDS 35.0%
! GAATTTTGTGAATGCTGAGA+GGG + Chr5:106205729-106205748 MsG0580030070.01.T01:CDS 35.0%
! GCTGATAATGCTTATTATGC+TGG + Chr5:106205262-106205281 MsG0580030070.01.T01:CDS 35.0%
! GGAAAGTATATTCCTGCAAT+AGG + Chr5:106205127-106205146 MsG0580030070.01.T01:CDS 35.0%
!!! AGAAGATTGGGTTTTGGAAA+AGG + Chr5:106205879-106205898 MsG0580030070.01.T01:CDS 35.0%
!!! GAAGATTGGGTTTTGGAAAA+GGG + Chr5:106205880-106205899 MsG0580030070.01.T01:CDS 35.0%
!!! GTTTTGGAAAAGGGTTTGTT+TGG + Chr5:106205889-106205908 MsG0580030070.01.T01:CDS 35.0%
!!! TACAAATGTTGTGGTTTTGG+GGG + Chr5:106205807-106205826 MsG0580030070.01.T01:CDS 35.0%
AAGAGTGAATTTAGCTGGTG+TGG + Chr5:106205192-106205211 MsG0580030070.01.T01:CDS 40.0%
AAGATTCTATTCCAAGCACC+AGG - Chr5:106204926-106204945 None:intergenic 40.0%
AATTTAGCTGGTGTGGCAAT+TGG + Chr5:106205199-106205218 MsG0580030070.01.T01:CDS 40.0%
AGATTCTATTCCAAGCACCA+GGG - Chr5:106204925-106204944 None:intergenic 40.0%
AGGGAGATTTGGAAGGTAAA+TGG + Chr5:106205748-106205767 MsG0580030070.01.T01:CDS 40.0%
AGTTATTGAAGGAGGAGATG+AGG + Chr5:106205617-106205636 MsG0580030070.01.T01:CDS 40.0%
ATGCTGGATTGATCAATGAG+AGG + Chr5:106205278-106205297 MsG0580030070.01.T01:CDS 40.0%
ATTACTGGTGAAAGCTATGC+TGG + Chr5:106205106-106205125 MsG0580030070.01.T01:CDS 40.0%
CACAAACTCCACTTCTCATT+TGG + Chr5:106204807-106204826 MsG0580030070.01.T01:CDS 40.0%
CTGTTGAGTTAGTAGAGAGA+AGG + Chr5:106205335-106205354 MsG0580030070.01.T01:CDS 40.0%
GAGTAACCATTTGAGTGACA+GGG - Chr5:106205240-106205259 None:intergenic 40.0%
GATCTGTTGCAAAACATGAC+AGG + Chr5:106205397-106205416 MsG0580030070.01.T01:CDS 40.0%
GATTTGGAAGGTAAATGGAG+AGG + Chr5:106205753-106205772 MsG0580030070.01.T01:CDS 40.0%
GCAACCAACCAATCTTCATA+AGG - Chr5:106205457-106205476 None:intergenic 40.0%
GGTAGAGAAGTTATTGAAGG+AGG + Chr5:106205609-106205628 MsG0580030070.01.T01:CDS 40.0%
GGTGCTTGGAATAGAATCTT+TGG + Chr5:106204926-106204945 MsG0580030070.01.T01:CDS 40.0%
GTTATTGAAGGAGGAGATGA+GGG + Chr5:106205618-106205637 MsG0580030070.01.T01:CDS 40.0%
TGAAGACTATGAAGTGGGAA+GGG + Chr5:106205701-106205720 MsG0580030070.01.T01:CDS 40.0%
TGAGTAACCATTTGAGTGAC+AGG - Chr5:106205241-106205260 None:intergenic 40.0%
TGTGTAGAAAATGGAGGAAG+TGG - Chr5:106204753-106204772 None:intergenic 40.0%
TGTTGTTCAAGTAGAGGCTT+GGG + Chr5:106205678-106205697 MsG0580030070.01.T01:CDS 40.0%
TTCATCAACATTCACCCCTA+AGG - Chr5:106205512-106205531 None:intergenic 40.0%
TTGGGTGAAGACTATGAAGT+GGG + Chr5:106205696-106205715 MsG0580030070.01.T01:CDS 40.0%
! CTTGATAATCCCATTGGAAC+CGG + Chr5:106204959-106204978 MsG0580030070.01.T01:CDS 40.0%
! GAATTCAAAGGTTGATCAGC+AGG - Chr5:106205847-106205866 None:intergenic 40.0%
! TGAAGCACTTCCCACAAAAT+CGG + Chr5:106204703-106204722 MsG0580030070.01.T01:CDS 40.0%
!! ATGAGGGTGTTGTTGTATCA+AGG + Chr5:106205634-106205653 MsG0580030070.01.T01:CDS 40.0%
!! TTTGTGGGAAGTGCTTCATA+GGG - Chr5:106204701-106204720 None:intergenic 40.0%
!!! ACAAATGTTGTGGTTTTGGG+GGG + Chr5:106205808-106205827 MsG0580030070.01.T01:CDS 40.0%
!!! TTTTGTGGGAAGTGCTTCAT+AGG - Chr5:106204702-106204721 None:intergenic 40.0%
AACAGACCCTGTCACTCAAA+TGG + Chr5:106205231-106205250 MsG0580030070.01.T01:CDS 45.0%
AAGGTAAATGGAGAGGTAGC+TGG + Chr5:106205760-106205779 MsG0580030070.01.T01:CDS 45.0%
AGAAGTGGAGTTTGTGAGAG+AGG - Chr5:106204803-106204822 None:intergenic 45.0%
AGAATGTGAGACCGAGAAAG+AGG - Chr5:106204669-106204688 None:intergenic 45.0%
AGTGAACTGGTGACACGATA+AGG - Chr5:106204887-106204906 None:intergenic 45.0%
AGTTTGTGAGAGAGGTGAAG+TGG - Chr5:106204795-106204814 None:intergenic 45.0%
CCTTGAAGCCAAATGAGAAG+TGG - Chr5:106204818-106204837 None:intergenic 45.0%
CTTGGGTGAAGACTATGAAG+TGG + Chr5:106205695-106205714 MsG0580030070.01.T01:CDS 45.0%
GAAAATGGAGGAAGTGGAAG+TGG - Chr5:106204747-106204766 None:intergenic 45.0%
GAAGTGGAAGTGGAAGTTAC+AGG - Chr5:106204737-106204756 None:intergenic 45.0%
GTGAAGACTATGAAGTGGGA+AGG + Chr5:106205700-106205719 MsG0580030070.01.T01:CDS 45.0%
TCAGTTCTTGAATATCGCCG+AGG + Chr5:106205477-106205496 MsG0580030070.01.T01:CDS 45.0%
TGAATGCTGAGAGGGAGATT+TGG + Chr5:106205737-106205756 MsG0580030070.01.T01:CDS 45.0%
TGATCAGGTGGAATCTCTTG+CGG - Chr5:106205004-106205023 None:intergenic 45.0%
TGGAAGTGGAAGTTACAGGT+AGG - Chr5:106204733-106204752 None:intergenic 45.0%
! AGGTAGGTAACCCGATTTTG+TGG - Chr5:106204717-106204736 None:intergenic 45.0%
! CCACTTCTCATTTGGCTTCA+AGG + Chr5:106204815-106204834 MsG0580030070.01.T01:CDS 45.0%
! CTTCTCATTTGGCTTCAAGG+TGG + Chr5:106204818-106204837 MsG0580030070.01.T01:CDS 45.0%
! GAAGCACTTCCCACAAAATC+GGG + Chr5:106204704-106204723 MsG0580030070.01.T01:CDS 45.0%
! GAGTGTACTGATGAACAAGG+TGG - Chr5:106204618-106204637 None:intergenic 45.0%
! GGTAGGTAACCCGATTTTGT+GGG - Chr5:106204716-106204735 None:intergenic 45.0%
! GTGTTGTTCAAGTAGAGGCT+TGG + Chr5:106205677-106205696 MsG0580030070.01.T01:CDS 45.0%
!! TTGTGGGAAGTGCTTCATAG+GGG - Chr5:106204700-106204719 None:intergenic 45.0%
ATCAAGGTCAGCGCGATTTG+AGG + Chr5:106205650-106205669 MsG0580030070.01.T01:CDS 50.0%
CGTTGAAGCTACACTGAAGC+CGG - Chr5:106204981-106205000 None:intergenic 50.0%
CTATTCCAAGCACCAGGGTT+CGG - Chr5:106204920-106204939 None:intergenic 50.0%
GAATATCGCCGAGGTGAAGA+AGG + Chr5:106205486-106205505 MsG0580030070.01.T01:CDS 50.0%
GATTCCACCTGATCAAACCG+CGG + Chr5:106205009-106205028 MsG0580030070.01.T01:CDS 50.0%
GCTGGTGTGGCAATTGGTAA+TGG + Chr5:106205205-106205224 MsG0580030070.01.T01:CDS 50.0%
GTCGGCAACTTCTACGAACT+CGG + Chr5:106204860-106204879 MsG0580030070.01.T01:CDS 50.0%
TCAAGGTCAGCGCGATTTGA+GGG + Chr5:106205651-106205670 MsG0580030070.01.T01:CDS 50.0%
TGAGAGGCAGAAGAATGAGC+TGG + Chr5:106205294-106205313 MsG0580030070.01.T01:CDS 50.0%
TGCTGAGAGGGAGATTTGGA+AGG + Chr5:106205741-106205760 MsG0580030070.01.T01:CDS 50.0%
TTCGTAGAAGTTGCCGACCA+TGG - Chr5:106204858-106204877 None:intergenic 50.0%
! ACACTGAAGCCGGTTCCAAT+GGG - Chr5:106204971-106204990 None:intergenic 50.0%
! TACACTGAAGCCGGTTCCAA+TGG - Chr5:106204972-106204991 None:intergenic 50.0%
! TGATGCGAGAAGCCGTGTTT+TGG + Chr5:106205375-106205394 MsG0580030070.01.T01:CDS 50.0%
!! GGTCGGTGTTGTTCAAGTAG+AGG + Chr5:106205672-106205691 MsG0580030070.01.T01:CDS 50.0%
!!! AATGTTGTGGTTTTGGGGGG+TGG + Chr5:106205811-106205830 MsG0580030070.01.T01:CDS 50.0%
CCCTAAGGCCTTCTTCACCT+CGG - Chr5:106205497-106205516 None:intergenic 55.0%
CCGAGGTGAAGAAGGCCTTA+GGG + Chr5:106205494-106205513 MsG0580030070.01.T01:CDS 55.0%
CGAGGTGAAGAAGGCCTTAG+GGG + Chr5:106205495-106205514 MsG0580030070.01.T01:CDS 55.0%
CGGTTGAAGGGTGAGTGAAC+TGG - Chr5:106204900-106204919 None:intergenic 55.0%
GAAAAGATGTTCCGCGACCG+CGG - Chr5:106205029-106205048 None:intergenic 55.0%
GTAGAAGTTGCCGACCATGG+AGG - Chr5:106204855-106204874 None:intergenic 55.0%
TTCAACCGAACCCTGGTGCT+TGG + Chr5:106204912-106204931 MsG0580030070.01.T01:CDS 55.0%
! AAGCACCAGGGTTCGGTTGA+AGG - Chr5:106204913-106204932 None:intergenic 55.0%
! AGCACCAGGGTTCGGTTGAA+GGG - Chr5:106204912-106204931 None:intergenic 55.0%
! ATTTGGCTTCAAGGTGGCCC+TGG + Chr5:106204824-106204843 MsG0580030070.01.T01:CDS 55.0%
ACCTGATCAAACCGCGGTCG+CGG + Chr5:106205015-106205034 MsG0580030070.01.T01:CDS 60.0%
CCTGGATGCTCCTCCATGGT+CGG + Chr5:106204842-106204861 MsG0580030070.01.T01:CDS 60.0%
CTCACCCTTCAACCGAACCC+TGG + Chr5:106204905-106204924 MsG0580030070.01.T01:CDS 60.0%
GCCGAGGTGAAGAAGGCCTT+AGG + Chr5:106205493-106205512 MsG0580030070.01.T01:CDS 60.0%
GGTCAGCGCGATTTGAGGGT+CGG + Chr5:106205655-106205674 MsG0580030070.01.T01:CDS 60.0%
!! CGACCATGGAGGAGCATCCA+GGG - Chr5:106204844-106204863 None:intergenic 60.0%
GCGACCGCGGTTTGATCAGG+TGG - Chr5:106205016-106205035 None:intergenic 65.0%
TCCGCGACCGCGGTTTGATC+AGG - Chr5:106205019-106205038 None:intergenic 65.0%
TGGCCCTGGATGCTCCTCCA+TGG + Chr5:106204838-106204857 MsG0580030070.01.T01:CDS 65.0%
!! CCGACCATGGAGGAGCATCC+AGG - Chr5:106204845-106204864 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 106204587 106205960 106204587 ID=MsG0580030070.01;Name=MsG0580030070.01
Chr5 mRNA 106204587 106205960 106204587 ID=MsG0580030070.01.T01;Parent=MsG0580030070.01;Name=MsG0580030070.01.T01;_AED=0.34;_eAED=0.34;_QI=0|-1|0|1|-1|1|1|0|457
Chr5 exon 106204587 106205960 106204587 ID=MsG0580030070.01.T01:exon:17152;Parent=MsG0580030070.01.T01
Chr5 CDS 106204587 106205960 106204587 ID=MsG0580030070.01.T01:cds;Parent=MsG0580030070.01.T01
Gene Sequence

>MsG0580030070.01.T01

ATGATGATGAAGAAGGAAGACTACTCAACCACCTTGTTCATCAGTACACTCATTTTCTTCTCCTTCTTACAGTTTCATACCTCTTTCTCGGTCTCACATTCTTCGACATTCCCCTATGAAGCACTTCCCACAAAATCGGGTTACCTACCTGTAACTTCCACTTCCACTTCCTCCATTTTCTACACATTCTATGAAGCACAGAACTCCACTTCACCTCTCTCACAAACTCCACTTCTCATTTGGCTTCAAGGTGGCCCTGGATGCTCCTCCATGGTCGGCAACTTCTACGAACTCGGACCTTATCGTGTCACCAGTTCACTCACCCTTCAACCGAACCCTGGTGCTTGGAATAGAATCTTTGGCCTTGTTTTTCTTGATAATCCCATTGGAACCGGCTTCAGTGTAGCTTCAACGCCGCAAGAGATTCCACCTGATCAAACCGCGGTCGCGGAACATCTTTTCGCTGCTATAACAAGGTTTGTTGAACTTGATCCTGTTTTCAAACATCGTCCTATTTATATTACTGGTGAAAGCTATGCTGGAAAGTATATTCCTGCAATAGGATACTATATTTTAGAGAAGAATGCTAAGTTGAAAAGCACTGAAAGAGTGAATTTAGCTGGTGTGGCAATTGGTAATGGACTAACAGACCCTGTCACTCAAATGGTTACTCATGCTGATAATGCTTATTATGCTGGATTGATCAATGAGAGGCAGAAGAATGAGCTGGAAAAACTTCAACTTGAAGCTGTTGAGTTAGTAGAGAGAAGGAATTGGAGTGAAGCAACTGATGCGAGAAGCCGTGTTTTGGATCTGTTGCAAAACATGACAGGGTTTGCTACTTTGTATGATTATTCGCGGAAAGTTCCTTATGAAGATTGGTTGGTTGCTCAGTTCTTGAATATCGCCGAGGTGAAGAAGGCCTTAGGGGTGAATGTTGATGAATCATTTGTTTATGAGAAATGTAGTAAAATTGTTTGGGCTGCATTGCATGCTGATTTAATGAAAAGTGTAAAGTATATGGTAGAGAAGTTATTGAAGGAGGAGATGAGGGTGTTGTTGTATCAAGGTCAGCGCGATTTGAGGGTCGGTGTTGTTCAAGTAGAGGCTTGGGTGAAGACTATGAAGTGGGAAGGGATTGAGAATTTTGTGAATGCTGAGAGGGAGATTTGGAAGGTAAATGGAGAGGTAGCTGGTTATGTACAAAAATGGAAGTCACTTACAAATGTTGTGGTTTTGGGGGGTGGTCATCTTTTGCCTGCTGATCAACCTTTGAATTCTCAAGCTATGATAGAAGATTGGGTTTTGGAAAAGGGTTTGTTTGGAAGTGTGTCTTATCGAAATGTATCAAGAAATTCTGTGTATGATGGATGA
Protein sequence

>MsG0580030070.01.T01

MMMKKEDYSTTLFISTLIFFSFLQFHTSFSVSHSSTFPYEALPTKSGYLPVTSTSTSSIFYTFYEAQNSTSPLSQTPLLIWLQGGPGCSSMVGNFYELGPYRVTSSLTLQPNPGAWNRIFGLVFLDNPIGTGFSVASTPQEIPPDQTAVAEHLFAAITRFVELDPVFKHRPIYITGESYAGKYIPAIGYYILEKNAKLKSTERVNLAGVAIGNGLTDPVTQMVTHADNAYYAGLINERQKNELEKLQLEAVELVERRNWSEATDARSRVLDLLQNMTGFATLYDYSRKVPYEDWLVAQFLNIAEVKKALGVNVDESFVYEKCSKIVWAALHADLMKSVKYMVEKLLKEEMRVLLYQGQRDLRVGVVQVEAWVKTMKWEGIENFVNAEREIWKVNGEVAGYVQKWKSLTNVVVLGGGHLLPADQPLNSQAMIEDWVLEKGLFGSVSYRNVSRNSVYDG*