AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580030199.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030199.01.T02 MTR_5g098800 99.528 212 1 0 8 219 188 399 1.50e-161 452
MsG0580030199.01.T01 MTR_5g098800 99.528 212 1 0 8 219 188 399 1.50e-161 452
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580030199.01.T02 AT1G03475 92.453 212 16 0 8 219 175 386 3.01e-152 428
MsG0580030199.01.T02 AT4G03205 91.803 61 5 0 8 68 175 235 1.13e-35 126
MsG0580030199.01.T02 AT4G03205 93.220 59 4 0 8 66 175 233 1.93e-35 125
MsG0580030199.01.T01 AT1G03475 92.453 212 16 0 8 219 175 386 3.01e-152 428
MsG0580030199.01.T01 AT4G03205 91.803 61 5 0 8 68 175 235 1.13e-35 126
MsG0580030199.01.T01 AT4G03205 93.220 59 4 0 8 66 175 233 1.93e-35 125

Find 11 sgRNAs with CRISPR-Local

Find 444 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCTTCGCTTCCTACTTC+TGG 0.260841 5:-108115888 None:intergenic
TATCAGTTGACCACCCAATT+TGG 0.330643 5:+108115956 MsG0580030199.01.T01:three_prime_UTR
TGATTTACAATCCACCTAAT+AGG 0.370631 5:-108116066 None:intergenic
ATAAATTAGAGCCATTCCTT+TGG 0.373068 5:-108115936 None:intergenic
TAAATTAGAGCCATTCCTTT+GGG 0.416224 5:-108115935 None:intergenic
CAGAAGTAGGAAGCGAAGAA+TGG 0.479994 5:+108115889 MsG0580030199.01.T01:CDS
TGTGTGCAGAAACCAGAAGT+AGG 0.553657 5:+108115876 MsG0580030199.01.T01:intron
AGATGCATGCATTAACCCAA+AGG 0.618643 5:+108115920 MsG0580030199.01.T01:CDS
CATGCATTAACCCAAAGGAA+TGG 0.631803 5:+108115925 MsG0580030199.01.T01:CDS
GTTTAAACTGCACTGTACTG+TGG 0.648171 5:+108116210 MsG0580030199.01.T01:three_prime_UTR
ACAATGGGTAGTACAAAGAG+AGG 0.661628 5:-108116233 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATTTATGAAATTAATTATA+AGG - Chr5:108119054-108119073 None:intergenic 10.0%
!!! AATATATATAGATAATTTGT+TGG + Chr5:108115354-108115373 MsG0580030199.01.T01:intron 10.0%
!!! TTTCTTATTGTAATTATTTT+GGG + Chr5:108112961-108112980 MsG0580030199.01.T01:intron 10.0%
!!! TTTTCTTATTGTAATTATTT+TGG + Chr5:108112960-108112979 MsG0580030199.01.T01:intron 10.0%
!! AAAATTTACTCTTATATTGA+AGG - Chr5:108114600-108114619 None:intergenic 15.0%
!! AATCATATAATATCAATTGT+TGG + Chr5:108117045-108117064 MsG0580030199.01.T02:intron 15.0%
!! ACCTTGAATAAAATTAAAAT+AGG - Chr5:108118861-108118880 None:intergenic 15.0%
!! AGTTTAGATGTTATTAATAT+AGG + Chr5:108118694-108118713 MsG0580030199.01.T02:intron 15.0%
!! TATAAAATGGTGAAAATAAA+AGG - Chr5:108118921-108118940 None:intergenic 15.0%
!!! AAAATATAAAACTTTTCGAA+AGG + Chr5:108118297-108118316 MsG0580030199.01.T02:intron 15.0%
!!! AATTGTCAAATCTAAAATAA+AGG - Chr5:108118953-108118972 None:intergenic 15.0%
!!! ACAAAAATTTTGGTTTTTAT+TGG + Chr5:108117970-108117989 MsG0580030199.01.T02:intron 15.0%
!!! TATTTGTTTTTTCAGTTTAT+TGG - Chr5:108118221-108118240 None:intergenic 15.0%
!!! TATTTTAGATTTGACAATTT+TGG + Chr5:108118954-108118973 MsG0580030199.01.T02:intron 15.0%
!!! TCCTATTTTAATTTTATTCA+AGG + Chr5:108118857-108118876 MsG0580030199.01.T02:intron 15.0%
!! AAAATGACACTTAATATAAG+AGG + Chr5:108117541-108117560 MsG0580030199.01.T02:intron 20.0%
!! AAAGCAAAATTTATGAGTAT+GGG + Chr5:108118621-108118640 MsG0580030199.01.T02:intron 20.0%
!! AACAAATCTTTCAGTAATTT+AGG + Chr5:108118059-108118078 MsG0580030199.01.T02:intron 20.0%
!! ACGATATGTTGAATTTAATT+TGG + Chr5:108115551-108115570 MsG0580030199.01.T01:CDS 20.0%
!! ATCACTTAGAAATAAACAAT+CGG - Chr5:108119324-108119343 None:intergenic 20.0%
!! CAAACTATTATTACTTATGT+TGG + Chr5:108116803-108116822 MsG0580030199.01.T02:intron 20.0%
!! CTATTGTATAAAATGTAACA+TGG - Chr5:108117773-108117792 None:intergenic 20.0%
!! GATGTTATTAATATAGGTTA+AGG + Chr5:108118700-108118719 MsG0580030199.01.T02:intron 20.0%
!! TACTAATTAAATTGAGTATG+TGG + Chr5:108115181-108115200 MsG0580030199.01.T01:intron 20.0%
!! TTAAAAAGTTACCAAAGAAT+TGG - Chr5:108113831-108113850 None:intergenic 20.0%
!! TTACTACTTGTCAAAAAAAA+AGG + Chr5:108119236-108119255 MsG0580030199.01.T02:intron 20.0%
!!! AAAATTTTGGTTTTTATTGG+CGG + Chr5:108117973-108117992 MsG0580030199.01.T02:intron 20.0%
!!! AAGGAACAACTTTTATAAAA+TGG - Chr5:108118934-108118953 None:intergenic 20.0%
!!! AATTGTAATTTGCATTAGAT+AGG - Chr5:108116190-108116209 None:intergenic 20.0%
!!! AGATTTTGAATGAAATTTGA+AGG + Chr5:108119022-108119041 MsG0580030199.01.T02:intron 20.0%
!!! CAATATGTATATTTTTTGTC+TGG - Chr5:108116934-108116953 None:intergenic 20.0%
!!! GATTTTGAATGAAATTTGAA+GGG + Chr5:108119023-108119042 MsG0580030199.01.T02:intron 20.0%
!!! GGGTTTTTAAAAGAAAATAT+TGG + Chr5:108116899-108116918 MsG0580030199.01.T02:intron 20.0%
!!! GTTTTAGTTTGTGAAAAATT+TGG - Chr5:108117462-108117481 None:intergenic 20.0%
!!! TAAATATTTTTTGGTACAAC+AGG + Chr5:108118669-108118688 MsG0580030199.01.T02:intron 20.0%
!!! TATGACTTTGTTTTATGTTA+GGG + Chr5:108119579-108119598 MsG0580030199.01.T02:intron 20.0%
!!! TGATGATTACTTTTATATCA+AGG + Chr5:108114444-108114463 MsG0580030199.01.T01:CDS 20.0%
!!! TTAATTTTGTTCATCTTCAA+GGG + Chr5:108116615-108116634 MsG0580030199.01.T02:intron 20.0%
!!! TTATGACTTTGTTTTATGTT+AGG + Chr5:108119578-108119597 MsG0580030199.01.T02:intron 20.0%
!!! TTATTTGAGTAGTTTTAATC+TGG + Chr5:108113898-108113917 MsG0580030199.01.T01:intron 20.0%
!!! TTTAATTTTGTTCATCTTCA+AGG + Chr5:108116614-108116633 MsG0580030199.01.T02:intron 20.0%
!!! TTTCGTTTTTATGTTATTGT+TGG + Chr5:108119885-108119904 MsG0580030199.01.T02:intron 20.0%
! AAAAACACATTTCTAAATCC+TGG - Chr5:108113065-108113084 None:intergenic 25.0%
! AAAGAATTGAATCTCCAAAT+TGG + Chr5:108114198-108114217 MsG0580030199.01.T01:intron 25.0%
! AAATCTCCATAATGTGAAAA+AGG - Chr5:108114481-108114500 None:intergenic 25.0%
! AAGTCATATGTTGTACAAAT+TGG - Chr5:108119143-108119162 None:intergenic 25.0%
! AATACATCTTACTGGAAAAT+TGG + Chr5:108118030-108118049 MsG0580030199.01.T02:intron 25.0%
! ACAAAAAAATGTGAACATGA+AGG - Chr5:108116770-108116789 None:intergenic 25.0%
! ACATAATATGTGAAACAATG+AGG + Chr5:108119371-108119390 MsG0580030199.01.T02:intron 25.0%
! AGGGGAAAATCTATTAAAAA+AGG + Chr5:108119391-108119410 MsG0580030199.01.T02:intron 25.0%
! AGTATAAAACATCATTGATG+AGG + Chr5:108117795-108117814 MsG0580030199.01.T02:intron 25.0%
! ATAACATGTGAAATCAAAGA+AGG - Chr5:108117399-108117418 None:intergenic 25.0%
! ATAATATGTGAAACAATGAG+GGG + Chr5:108119373-108119392 MsG0580030199.01.T02:intron 25.0%
! ATATACCTATCATAGAGAAA+AGG + Chr5:108115475-108115494 MsG0580030199.01.T01:CDS 25.0%
! ATTGAAAAAGCTACCAAATT+GGG - Chr5:108115972-108115991 None:intergenic 25.0%
! CATAATATGTGAAACAATGA+GGG + Chr5:108119372-108119391 MsG0580030199.01.T02:intron 25.0%
! CATCAAAAAAATGTAGGTTA+AGG + Chr5:108118782-108118801 MsG0580030199.01.T02:intron 25.0%
! GAAAGCAAAATTTATGAGTA+TGG + Chr5:108118620-108118639 MsG0580030199.01.T02:intron 25.0%
! GAAGATGAACAAAATTAAAC+AGG - Chr5:108116613-108116632 None:intergenic 25.0%
! GCTGATAATATGATATATTC+AGG + Chr5:108114791-108114810 MsG0580030199.01.T01:intron 25.0%
! GGATTTAATCAAAACCTATT+CGG + Chr5:108116380-108116399 MsG0580030199.01.T02:intron 25.0%
! GTATAAAACATCATTGATGA+GGG + Chr5:108117796-108117815 MsG0580030199.01.T02:intron 25.0%
! TAACATGTGAAATCAAAGAA+GGG - Chr5:108117398-108117417 None:intergenic 25.0%
! TAATCCCAATATTATCAATG+AGG - Chr5:108114979-108114998 None:intergenic 25.0%
! TATATGATGTATCAAATGAG+AGG + Chr5:108117005-108117024 MsG0580030199.01.T02:intron 25.0%
! TATGATAAAAGAGTCAATGT+AGG + Chr5:108114221-108114240 MsG0580030199.01.T01:intron 25.0%
! TATTGAAAAAGCTACCAAAT+TGG - Chr5:108115973-108115992 None:intergenic 25.0%
! TCAAAAAACAATTCAATTCG+CGG - Chr5:108116685-108116704 None:intergenic 25.0%
! TCAAATAAGATGTCAAAGTA+AGG - Chr5:108113886-108113905 None:intergenic 25.0%
! TCAGGAACATTAAATATTCA+CGG + Chr5:108117583-108117602 MsG0580030199.01.T02:intron 25.0%
! TCTATTTCGCAAAAAAACAA+AGG + Chr5:108116270-108116289 MsG0580030199.01.T02:intron 25.0%
! TGAATAGATAAAGAGACAAA+GGG - Chr5:108113136-108113155 None:intergenic 25.0%
! TGAATTAAATATGTCTAGCT+TGG + Chr5:108113946-108113965 MsG0580030199.01.T01:intron 25.0%
! TTATATAATGCTTCTGTTGT+AGG + Chr5:108114360-108114379 MsG0580030199.01.T01:intron 25.0%
! TTGAATAGATAAAGAGACAA+AGG - Chr5:108113137-108113156 None:intergenic 25.0%
!! AAAGTTGCAATTTTCTGATT+TGG + Chr5:108116831-108116850 MsG0580030199.01.T02:intron 25.0%
!! AATTTTATAACTGGAACATC+AGG - Chr5:108115832-108115851 None:intergenic 25.0%
!! ACTCTTTTATCATACCAATT+TGG - Chr5:108114215-108114234 None:intergenic 25.0%
!! AGGATTTAGAAATGTGTTTT+TGG + Chr5:108113064-108113083 MsG0580030199.01.T01:intron 25.0%
!! TCAATTGGTATACTCTAAAA+TGG - Chr5:108115080-108115099 None:intergenic 25.0%
!! TGAACCTCATTGATAATATT+GGG + Chr5:108114972-108114991 MsG0580030199.01.T01:intron 25.0%
!! TTGGAGATTCAATTCTTTTT+GGG - Chr5:108114196-108114215 None:intergenic 25.0%
!! TTGTGTTGTGCATTTTTAAT+TGG - Chr5:108117098-108117117 None:intergenic 25.0%
!! TTTATGAGTATGGGAAATTT+TGG + Chr5:108118630-108118649 MsG0580030199.01.T02:intron 25.0%
!! TTTGGAGATTCAATTCTTTT+TGG - Chr5:108114197-108114216 None:intergenic 25.0%
!! TTTTGCAATCTTGTTCTTTT+GGG + Chr5:108113293-108113312 MsG0580030199.01.T01:intron 25.0%
!! TTTTTATGCATTTAACTGCA+AGG + Chr5:108114900-108114919 MsG0580030199.01.T01:intron 25.0%
!! TTTTTATGTTATTGTTGGTG+TGG + Chr5:108119890-108119909 MsG0580030199.01.T02:intron 25.0%
!! TTTTTGCAATCTTGTTCTTT+TGG + Chr5:108113292-108113311 MsG0580030199.01.T01:intron 25.0%
!!! AAGATGAGTTATTTTGAACT+TGG - Chr5:108117321-108117340 None:intergenic 25.0%
!!! AGATGAGTTATTTTGAACTT+GGG - Chr5:108117320-108117339 None:intergenic 25.0%
!!! ATATTTTAAGCATAGGGATT+TGG + Chr5:108113992-108114011 MsG0580030199.01.T01:intron 25.0%
!!! ATCCGATATTTTTTTGCTTA+AGG + Chr5:108114310-108114329 MsG0580030199.01.T01:intron 25.0%
!!! ATTTAGAAATGTGTTTTTGG+CGG + Chr5:108113067-108113086 MsG0580030199.01.T01:intron 25.0%
!!! CAATTGGTATACTCTAAAAT+GGG - Chr5:108115079-108115098 None:intergenic 25.0%
!!! CTTAACCTACATTTTTTTGA+TGG - Chr5:108118784-108118803 None:intergenic 25.0%
!!! GATTGTTTATTTCTAAGTGA+TGG + Chr5:108119323-108119342 MsG0580030199.01.T02:intron 25.0%
!!! TAATGGTTTTTCAAATCTTG+TGG + Chr5:108113797-108113816 MsG0580030199.01.T01:intron 25.0%
!!! TATGTTTTGTTTCCATTTCA+AGG - Chr5:108114104-108114123 None:intergenic 25.0%
!!! TCCGATATTTTTTTGCTTAA+GGG + Chr5:108114311-108114330 MsG0580030199.01.T01:intron 25.0%
!!! TGTTTTTTTGCGAAATAGAT+AGG - Chr5:108116269-108116288 None:intergenic 25.0%
!!! TTTATTTCTAAGTGATGGAA+AGG + Chr5:108119328-108119347 MsG0580030199.01.T02:intron 25.0%
!!! TTTGAATCTGTTGGTAATTA+GGG + Chr5:108118106-108118125 MsG0580030199.01.T02:intron 25.0%
!!! TTTTGAATCTGTTGGTAATT+AGG + Chr5:108118105-108118124 MsG0580030199.01.T02:intron 25.0%
AAAAAAGGCAACTCTTAGTA+TGG - Chr5:108118400-108118419 None:intergenic 30.0%
AAAATTCATCACAAGCTGAA+AGG + Chr5:108117677-108117696 MsG0580030199.01.T02:intron 30.0%
AAACACCATATAACATTGTG+AGG - Chr5:108119218-108119237 None:intergenic 30.0%
AAAGTATGCCTTATACTATG+TGG + Chr5:108113382-108113401 MsG0580030199.01.T01:intron 30.0%
AACATGTGAAATCAAAGAAG+GGG - Chr5:108117397-108117416 None:intergenic 30.0%
AAGATAACTTTCCAAGTGAT+GGG - Chr5:108118544-108118563 None:intergenic 30.0%
AAGGAATAGAGCACAAAATT+TGG - Chr5:108115602-108115621 None:intergenic 30.0%
AAGTTATCTTCCGATCATAT+TGG + Chr5:108118554-108118573 MsG0580030199.01.T02:intron 30.0%
AAGTTATGTGACATAACAAG+TGG - Chr5:108118590-108118609 None:intergenic 30.0%
AAGTTCATCAAAATTAGCGT+TGG + Chr5:108116359-108116378 MsG0580030199.01.T02:intron 30.0%
AATATGGTAACTCAAAAGGA+TGG - Chr5:108118178-108118197 None:intergenic 30.0%
ACAACATTTGGACTAAAAAC+TGG + Chr5:108115683-108115702 MsG0580030199.01.T01:CDS 30.0%
ACATAAAAACGAAACCACAA+AGG - Chr5:108119879-108119898 None:intergenic 30.0%
ACATAATCACGATTCATTAC+AGG + Chr5:108117882-108117901 MsG0580030199.01.T02:intron 30.0%
ACATAGTATAAGGCATACTT+TGG - Chr5:108113383-108113402 None:intergenic 30.0%
ACTCAATATGGTAACTCAAA+AGG - Chr5:108118182-108118201 None:intergenic 30.0%
AGAAAACAGGGTTATAAGAA+GGG + Chr5:108116879-108116898 MsG0580030199.01.T02:intron 30.0%
AGCTGTACTTATGATAGTTA+AGG - Chr5:108113525-108113544 None:intergenic 30.0%
AGTTTAAACCTGATCTGAAA+AGG - Chr5:108115621-108115640 None:intergenic 30.0%
ATAAATTAGAGCCATTCCTT+TGG - Chr5:108115939-108115958 None:intergenic 30.0%
ATAATTGAAATGCAAGGTTG+GGG - Chr5:108112850-108112869 None:intergenic 30.0%
ATAGCGATAATTGAAATGCA+AGG - Chr5:108112856-108112875 None:intergenic 30.0%
ATCTGGATTAAACCTTGAAA+TGG + Chr5:108114089-108114108 MsG0580030199.01.T01:intron 30.0%
ATGACACTTAATATAAGAGG+AGG + Chr5:108117544-108117563 MsG0580030199.01.T02:intron 30.0%
ATGATATATTCAGGAGACTT+AGG + Chr5:108114800-108114819 MsG0580030199.01.T01:intron 30.0%
ATGTTGCATTCCAATATGAT+CGG - Chr5:108118567-108118586 None:intergenic 30.0%
ATTATGATGCCGCATATATA+CGG - Chr5:108119923-108119942 None:intergenic 30.0%
CAAAAAACAATTCAATTCGC+GGG - Chr5:108116684-108116703 None:intergenic 30.0%
CACAATAACAAATCCAAAAC+AGG - Chr5:108113199-108113218 None:intergenic 30.0%
CATAAAAACGAAACCACAAA+GGG - Chr5:108119878-108119897 None:intergenic 30.0%
CATATGTTGTACAAATTGGT+TGG - Chr5:108119139-108119158 None:intergenic 30.0%
CATTAAGTAAAATAGCTGCA+AGG - Chr5:108117361-108117380 None:intergenic 30.0%
CTCTATGATAGGTATATAAG+CGG - Chr5:108115472-108115491 None:intergenic 30.0%
GATAATTGAAATGCAAGGTT+GGG - Chr5:108112851-108112870 None:intergenic 30.0%
GATGATATGGTATCAATTGT+TGG - Chr5:108117205-108117224 None:intergenic 30.0%
GCCCTTAAGCAAAAAAATAT+CGG - Chr5:108114315-108114334 None:intergenic 30.0%
GCTAAAAGGAAAAGAAAAAG+TGG + Chr5:108117904-108117923 MsG0580030199.01.T02:intron 30.0%
GCTGTACTTATGATAGTTAA+GGG - Chr5:108113524-108113543 None:intergenic 30.0%
GTAAACCTCACAATGTTATA+TGG + Chr5:108119210-108119229 MsG0580030199.01.T02:intron 30.0%
GTCACATAACTTATGTGTAT+TGG + Chr5:108118598-108118617 MsG0580030199.01.T02:intron 30.0%
TAAATTAGAGCCATTCCTTT+GGG - Chr5:108115938-108115957 None:intergenic 30.0%
TATACTTGCTTTCGTTTACA+TGG - Chr5:108117645-108117664 None:intergenic 30.0%
TCGTGATTATGTGCATTATT+AGG - Chr5:108117874-108117893 None:intergenic 30.0%
TCTAGTACATATCACTATAC+TGG + Chr5:108113576-108113595 MsG0580030199.01.T01:intron 30.0%
TCTATGATAGGTATATAAGC+GGG - Chr5:108115471-108115490 None:intergenic 30.0%
TGACTATTCTCCCTTAAAAA+AGG - Chr5:108118415-108118434 None:intergenic 30.0%
TGATATATTCAGGAGACTTA+GGG + Chr5:108114801-108114820 MsG0580030199.01.T01:intron 30.0%
TGATTTACAATCCACCTAAT+AGG - Chr5:108116069-108116088 None:intergenic 30.0%
TGTATGTTAGGATGAATGAT+AGG + Chr5:108114701-108114720 MsG0580030199.01.T01:intron 30.0%
TTAGGATGAATGATAGGATA+AGG + Chr5:108114707-108114726 MsG0580030199.01.T01:intron 30.0%
TTAGGCGTCAGTAATATTAT+TGG + Chr5:108118077-108118096 MsG0580030199.01.T02:intron 30.0%
TTCCTCGTGTTTAAATGATT+TGG - Chr5:108119106-108119125 None:intergenic 30.0%
TTTACCTTTGTCAACATTAG+TGG + Chr5:108113093-108113112 MsG0580030199.01.T01:intron 30.0%
! AAACCAAAATTTTTGTAGCG+TGG - Chr5:108117966-108117985 None:intergenic 30.0%
! AGTTACACACAATTCTGTTT+TGG + Chr5:108119721-108119740 MsG0580030199.01.T02:intron 30.0%
! CTGAACCTCATTGATAATAT+TGG + Chr5:108114971-108114990 MsG0580030199.01.T01:intron 30.0%
! GATAGCTTGAATGTTTTTCT+TGG + Chr5:108118471-108118490 MsG0580030199.01.T02:intron 30.0%
! GGCAGTTAAAAGTGTAATTT+CGG - Chr5:108113503-108113522 None:intergenic 30.0%
! GTGCTGAATTTAAAACGAAA+AGG - Chr5:108115238-108115257 None:intergenic 30.0%
! TGATGATGTTTATTCATCGT+CGG + Chr5:108119072-108119091 MsG0580030199.01.T02:intron 30.0%
! TTCAGCAGCAATTTTATAAC+TGG - Chr5:108115841-108115860 None:intergenic 30.0%
!! AAGTAGCTTTGAAATGAACA+CGG - Chr5:108112942-108112961 None:intergenic 30.0%
!! AATTCAAGGGCATTTCAAAT+TGG - Chr5:108119621-108119640 None:intergenic 30.0%
!! AGAGTGGCTTTTAAAAAATC+AGG + Chr5:108116643-108116662 MsG0580030199.01.T02:intron 30.0%
!! AGATTCAATTCTTTTTGGGA+AGG - Chr5:108114192-108114211 None:intergenic 30.0%
!! ATTCAAGGGCATTTCAAATT+GGG - Chr5:108119620-108119639 None:intergenic 30.0%
!! ATTCAATTCTTTTTGGGAAG+GGG - Chr5:108114190-108114209 None:intergenic 30.0%
!! GATAGCTTGTATTCTTTTTC+TGG + Chr5:108115999-108116018 MsG0580030199.01.T01:three_prime_UTR 30.0%
!! GATTCAATTCTTTTTGGGAA+GGG - Chr5:108114191-108114210 None:intergenic 30.0%
!! TCTCATCCTTTTTCACATTA+TGG + Chr5:108114472-108114491 MsG0580030199.01.T01:intron 30.0%
!! TTGAATCTGTTGGTAATTAG+GGG + Chr5:108118107-108118126 MsG0580030199.01.T02:intron 30.0%
!!! AACCTACATTTTTTTGATGG+TGG - Chr5:108118781-108118800 None:intergenic 30.0%
!!! ACTAAGAGTTGCCTTTTTTA+AGG + Chr5:108118401-108118420 MsG0580030199.01.T02:intron 30.0%
!!! AGGGATTTTTTGCATTACAT+AGG - Chr5:108118006-108118025 None:intergenic 30.0%
!!! CTAAGAGTTGCCTTTTTTAA+GGG + Chr5:108118402-108118421 MsG0580030199.01.T02:intron 30.0%
!!! CTGTTTTGGATTTGTTATTG+TGG + Chr5:108113197-108113216 MsG0580030199.01.T01:intron 30.0%
!!! GGGATTTTTTGCATTACATA+GGG - Chr5:108118005-108118024 None:intergenic 30.0%
!!! GTTTGTTTTTTAGCCTGTTT+TGG + Chr5:108113183-108113202 MsG0580030199.01.T01:intron 30.0%
!!! TTCTTTTGGGTTGGTTTTTT+TGG + Chr5:108113306-108113325 MsG0580030199.01.T01:intron 30.0%
AAAAAACAAACAGTCGCATC+AGG - Chr5:108113174-108113193 None:intergenic 35.0%
AAAACACTTGCCAAAGGAAA+GGG - Chr5:108119956-108119975 None:intergenic 35.0%
AAAAGCAGAACACATACCTT+TGG - Chr5:108112895-108112914 None:intergenic 35.0%
AAACTTGTAGTGACTGACAT+TGG + Chr5:108113611-108113630 MsG0580030199.01.T01:intron 35.0%
AAAGCAATGAATGAGCATTC+AGG + Chr5:108114560-108114579 MsG0580030199.01.T01:intron 35.0%
AAAGCAGAACACATACCTTT+GGG - Chr5:108112894-108112913 None:intergenic 35.0%
AACGCAAACCACATAGTATA+AGG - Chr5:108113393-108113412 None:intergenic 35.0%
AAGCAATGAATGAGCATTCA+GGG + Chr5:108114561-108114580 MsG0580030199.01.T01:intron 35.0%
AATCCTAAATGCCACCAATA+TGG - Chr5:108117269-108117288 None:intergenic 35.0%
ACACAAAAACACACTTGTGA+CGG + Chr5:108118816-108118835 MsG0580030199.01.T02:intron 35.0%
ACATGTTTGAGGGATTAAAG+TGG + Chr5:108115141-108115160 MsG0580030199.01.T01:intron 35.0%
ACATTTGGACTAAAAACTGG+AGG + Chr5:108115686-108115705 MsG0580030199.01.T01:CDS 35.0%
ACCCATAAATCCTGAAATGA+AGG + Chr5:108114939-108114958 MsG0580030199.01.T01:intron 35.0%
ACCTATCATAGAGAAAAGGA+AGG + Chr5:108115479-108115498 MsG0580030199.01.T01:CDS 35.0%
ACGATTCATTACAGGCTAAA+AGG + Chr5:108117890-108117909 MsG0580030199.01.T02:intron 35.0%
AGCAAGGATGTTTGTATGTT+AGG + Chr5:108114689-108114708 MsG0580030199.01.T01:intron 35.0%
AGCCAAGCAATTCTAATTCA+AGG - Chr5:108119635-108119654 None:intergenic 35.0%
AGTGGTATTCAGTTCCATAT+AGG + Chr5:108117922-108117941 MsG0580030199.01.T02:intron 35.0%
ATAGGTTCTTGAGGAACAAT+GGG - Chr5:108116172-108116191 None:intergenic 35.0%
ATCAAAATTGTCCCATCACT+TGG + Chr5:108118530-108118549 MsG0580030199.01.T02:intron 35.0%
ATCACACCATTTCTTGAATC+GGG - Chr5:108114428-108114447 None:intergenic 35.0%
ATCCTAAATGCCACCAATAT+GGG - Chr5:108117268-108117287 None:intergenic 35.0%
ATGAAACCAGTGTTTGTAGA+TGG + Chr5:108114664-108114683 MsG0580030199.01.T01:intron 35.0%
ATGTTTCTCTCTATGCTATC+TGG + Chr5:108114072-108114091 MsG0580030199.01.T01:intron 35.0%
CAAAACCTATTCGGTTCAAT+AGG + Chr5:108116389-108116408 MsG0580030199.01.T02:intron 35.0%
CACCAAATCATTTAAACACG+AGG + Chr5:108119101-108119120 MsG0580030199.01.T02:intron 35.0%
CATCACACCATTTCTTGAAT+CGG - Chr5:108114429-108114448 None:intergenic 35.0%
CCAGTAAGATGTATTACTGA+GGG - Chr5:108118025-108118044 None:intergenic 35.0%
CGATAATTGAAATGCAAGGT+TGG - Chr5:108112852-108112871 None:intergenic 35.0%
CGTGTATACTTAGTTGATCA+TGG + Chr5:108115108-108115127 MsG0580030199.01.T01:intron 35.0%
GAAGATAACTTTCCAAGTGA+TGG - Chr5:108118545-108118564 None:intergenic 35.0%
GAATAACACCTGTGATGATT+TGG + Chr5:108114729-108114748 MsG0580030199.01.T01:intron 35.0%
GACCACCATCAAAAAAATGT+AGG + Chr5:108118776-108118795 MsG0580030199.01.T02:intron 35.0%
GAGAAAACAGGGTTATAAGA+AGG + Chr5:108116878-108116897 MsG0580030199.01.T02:intron 35.0%
GAGTTACCATATTGAGTGTA+TGG + Chr5:108118185-108118204 MsG0580030199.01.T02:intron 35.0%
GATAGCTTCACGAAATCAAT+AGG + Chr5:108116703-108116722 MsG0580030199.01.T02:intron 35.0%
GCCAAGCAATTCTAATTCAA+GGG - Chr5:108119634-108119653 None:intergenic 35.0%
GCCTTCATTTCAGGATTTAT+GGG - Chr5:108114943-108114962 None:intergenic 35.0%
GCTTCATCACAAAATCTAGT+GGG + Chr5:108116962-108116981 MsG0580030199.01.T02:intron 35.0%
GGTAGCAGTAGATGATTATA+CGG - Chr5:108117752-108117771 None:intergenic 35.0%
GTAGCAGTAGATGATTATAC+GGG - Chr5:108117751-108117770 None:intergenic 35.0%
GTCTTTCGTTCTATATGTTC+AGG + Chr5:108112800-108112819 MsG0580030199.01.T01:CDS 35.0%
TATTGTGTGCACTTACTGAA+TGG - Chr5:108113779-108113798 None:intergenic 35.0%
TCAGTAAGTGCACACAATAA+TGG + Chr5:108113780-108113799 MsG0580030199.01.T01:intron 35.0%
TCCAGTAAGATGTATTACTG+AGG - Chr5:108118026-108118045 None:intergenic 35.0%
TCTATTCAATTTCAGTCGTG+TGG + Chr5:108113148-108113167 MsG0580030199.01.T01:intron 35.0%
TCTGTTGTAGGTTCAAAAAC+AGG + Chr5:108114372-108114391 MsG0580030199.01.T01:intron 35.0%
TGAAACCAGTGTTTGTAGAT+GGG + Chr5:108114665-108114684 MsG0580030199.01.T01:intron 35.0%
TGCCTTCATTTCAGGATTTA+TGG - Chr5:108114944-108114963 None:intergenic 35.0%
TGCTTCATCACAAAATCTAG+TGG + Chr5:108116961-108116980 MsG0580030199.01.T02:intron 35.0%
TGGTTAAGAGTCCAATTCTT+TGG + Chr5:108113817-108113836 MsG0580030199.01.T01:intron 35.0%
TTAGAGCCATACACTCAATA+TGG - Chr5:108118194-108118213 None:intergenic 35.0%
TTATGTTATTGTTGGTGTGG+TGG + Chr5:108119893-108119912 MsG0580030199.01.T02:intron 35.0%
TTCTTGGACTTAACCAAGAA+GGG + Chr5:108118487-108118506 MsG0580030199.01.T02:intron 35.0%
TTGCATTAGATAGGTTCTTG+AGG - Chr5:108116181-108116200 None:intergenic 35.0%
TTTCATGCTTGCCTAAACTA+TGG + Chr5:108115415-108115434 MsG0580030199.01.T01:intron 35.0%
TTTCTTGGACTTAACCAAGA+AGG + Chr5:108118486-108118505 MsG0580030199.01.T02:intron 35.0%
! AAATTTTTGTAGCGTGGTGA+TGG - Chr5:108117960-108117979 None:intergenic 35.0%
! ACAAAGGGCATATATACTAC+AGG - Chr5:108113121-108113140 None:intergenic 35.0%
! ATACACGAAACTGACTCAAT+TGG - Chr5:108115095-108115114 None:intergenic 35.0%
! CTGGAATTCAAGTTAAAGGA+TGG + Chr5:108116730-108116749 MsG0580030199.01.T02:intron 35.0%
! CTTCATCTCTTAGACTTGTT+TGG + Chr5:108113248-108113267 MsG0580030199.01.T01:intron 35.0%
! CTTCCTGGAATTCAAGTTAA+AGG + Chr5:108116726-108116745 MsG0580030199.01.T02:intron 35.0%
! TATGATAGGGGTACAACATT+TGG + Chr5:108115671-108115690 MsG0580030199.01.T01:CDS 35.0%
! TCACCACGCTACAAAAATTT+TGG + Chr5:108117960-108117979 MsG0580030199.01.T02:intron 35.0%
! TCCTTCCTTTTCTCTATGAT+AGG - Chr5:108115483-108115502 None:intergenic 35.0%
! TGGCAGAATTTTGAATCTGT+TGG + Chr5:108118097-108118116 MsG0580030199.01.T02:intron 35.0%
! TGTATTTTGTCCCTTTCCTT+TGG + Chr5:108119943-108119962 MsG0580030199.01.T02:intron 35.0%
!! AAATTTTAGCGTTGGATGTC+TGG - Chr5:108118341-108118360 None:intergenic 35.0%
!! AATTTTAGCGTTGGATGTCT+GGG - Chr5:108118340-108118359 None:intergenic 35.0%
!! CATCCTTTAACTTGAATTCC+AGG - Chr5:108116732-108116751 None:intergenic 35.0%
!! GCGCTGATATTTTAAGCATA+GGG + Chr5:108113986-108114005 MsG0580030199.01.T01:intron 35.0%
!! GTATCAATTGTTGGTAGTGA+AGG - Chr5:108117196-108117215 None:intergenic 35.0%
!! TGCTGATTTAGATTTGCAGA+TGG - Chr5:108117170-108117189 None:intergenic 35.0%
!! TGGATTTGTTATTGTGGTTC+TGG + Chr5:108113203-108113222 MsG0580030199.01.T01:intron 35.0%
!!! ACATTTTTTTGATGGTGGTC+AGG - Chr5:108118776-108118795 None:intergenic 35.0%
!!! AGCTGTTTTAGCTTCCTATT+AGG + Chr5:108116052-108116071 MsG0580030199.01.T01:three_prime_UTR 35.0%
!!! CATTTTTTTGATGGTGGTCA+GGG - Chr5:108118775-108118794 None:intergenic 35.0%
!!! CTTATGTTGCCACTGTTTTT+TGG + Chr5:108115639-108115658 MsG0580030199.01.T01:intron 35.0%
!!! GTGATGGGACAATTTTGATT+TGG - Chr5:108118529-108118548 None:intergenic 35.0%
!!! TGTTTTAGCTTCCTATTAGG+TGG + Chr5:108116055-108116074 MsG0580030199.01.T01:three_prime_UTR 35.0%
!!! TTTGGGTTGGTTTTTTTGGT+GGG + Chr5:108113310-108113329 MsG0580030199.01.T01:intron 35.0%
!!! TTTTGGGTTGGTTTTTTTGG+TGG + Chr5:108113309-108113328 MsG0580030199.01.T01:intron 35.0%
!!! TTTTTTTGGGTTTTGAGGCA+GGG + Chr5:108119807-108119826 MsG0580030199.01.T02:intron 35.0%
AAAAGTGAAGCTCTCGGAAT+TGG + Chr5:108116856-108116875 MsG0580030199.01.T02:intron 40.0%
AATGTAAGCAGGGGTTAAGT+CGG - Chr5:108113733-108113752 None:intergenic 40.0%
ACAATGGGTAGTACAAAGAG+AGG - Chr5:108116157-108116176 None:intergenic 40.0%
ACACACAAAACACTTGCCAA+AGG - Chr5:108119962-108119981 None:intergenic 40.0%
ACTTGAAACATCCCCCATAT+TGG + Chr5:108117252-108117271 MsG0580030199.01.T02:intron 40.0%
AGATGCATGCATTAACCCAA+AGG + Chr5:108115920-108115939 MsG0580030199.01.T01:CDS 40.0%
AGATTTGCAGATGGAAGAGA+AGG - Chr5:108117161-108117180 None:intergenic 40.0%
AGTGACTGACATTGGATAAC+AGG + Chr5:108113619-108113638 MsG0580030199.01.T01:intron 40.0%
ATGCTTCTTTCCTTTGCTAC+TGG + Chr5:108115321-108115340 MsG0580030199.01.T01:CDS 40.0%
CAAAACACTTGCCAAAGGAA+AGG - Chr5:108119957-108119976 None:intergenic 40.0%
CAAGCAATTACCAGTAGCAA+AGG - Chr5:108115334-108115353 None:intergenic 40.0%
CACAAAAACACACTTGTGAC+GGG + Chr5:108118817-108118836 MsG0580030199.01.T02:intron 40.0%
CACAAGCTGAAAGGAAAAAG+TGG + Chr5:108117686-108117705 MsG0580030199.01.T02:intron 40.0%
CACTATTGCCAAATCATCAC+AGG - Chr5:108114740-108114759 None:intergenic 40.0%
CATGCATTAACCCAAAGGAA+TGG + Chr5:108115925-108115944 MsG0580030199.01.T01:CDS 40.0%
CATTAGATCGTCTAACCAGA+TGG - Chr5:108118152-108118171 None:intergenic 40.0%
CCAATAGAAGCAAACTCAAG+AGG - Chr5:108113645-108113664 None:intergenic 40.0%
CCCTCAGTAATACATCTTAC+TGG + Chr5:108118022-108118041 MsG0580030199.01.T02:intron 40.0%
CCTCCTCAAAAATGTAAGCA+GGG - Chr5:108113743-108113762 None:intergenic 40.0%
CTCCTCAAAAATGTAAGCAG+GGG - Chr5:108113742-108113761 None:intergenic 40.0%
CTTGGTTCCTTTGATATGTG+TGG + Chr5:108113964-108113983 MsG0580030199.01.T01:intron 40.0%
GAAAAAGCTACCAAATTGGG+TGG - Chr5:108115969-108115988 None:intergenic 40.0%
GATAGGTTCTTGAGGAACAA+TGG - Chr5:108116173-108116192 None:intergenic 40.0%
GATTCAAATTTCGCCCTTCT+TGG - Chr5:108118503-108118522 None:intergenic 40.0%
GATTTGCAGATGGAAGAGAA+GGG - Chr5:108117160-108117179 None:intergenic 40.0%
GCAAACCTATTGAACCGAAT+AGG - Chr5:108116397-108116416 None:intergenic 40.0%
GCCCTTGAATTAGAATTGCT+TGG + Chr5:108119630-108119649 MsG0580030199.01.T02:intron 40.0%
GCGAAATAGATAGGTTCTTG+AGG - Chr5:108116260-108116279 None:intergenic 40.0%
GCTTTCTGATGATCTGTGAA+GGG - Chr5:108115510-108115529 None:intergenic 40.0%
GGATCCACTAATGTTGACAA+AGG - Chr5:108113100-108113119 None:intergenic 40.0%
GTAGGACAGTTGAGAAATTC+TGG + Chr5:108114239-108114258 MsG0580030199.01.T01:intron 40.0%
GTTTAAACTGCACTGTACTG+TGG + Chr5:108116131-108116150 MsG0580030199.01.T01:intron 40.0%
TATCAGTTGACCACCCAATT+TGG + Chr5:108115956-108115975 MsG0580030199.01.T01:three_prime_UTR 40.0%
TCACACCATTTCTTGAATCG+GGG - Chr5:108114427-108114446 None:intergenic 40.0%
TCACAGATCATCAGAAAGCA+TGG + Chr5:108115511-108115530 MsG0580030199.01.T01:CDS 40.0%
TCCTAAATGCCACCAATATG+GGG - Chr5:108117267-108117286 None:intergenic 40.0%
TCCTCCTCAAAAATGTAAGC+AGG - Chr5:108113744-108113763 None:intergenic 40.0%
TCTCGGAATTGGAGAAAACA+GGG + Chr5:108116867-108116886 MsG0580030199.01.T02:intron 40.0%
TCTGCAAGCAACCATAGTTT+AGG - Chr5:108115429-108115448 None:intergenic 40.0%
TGACGTGAGGAGTTAAGTTA+GGG + Chr5:108119548-108119567 MsG0580030199.01.T02:intron 40.0%
TGATATTGAAACGTGTGCTG+CGG + Chr5:108118435-108118454 MsG0580030199.01.T02:intron 40.0%
TGCTTTCTGATGATCTGTGA+AGG - Chr5:108115511-108115530 None:intergenic 40.0%
TTGACGTGAGGAGTTAAGTT+AGG + Chr5:108119547-108119566 MsG0580030199.01.T02:intron 40.0%
TTGGAGAAAAGTGAAGCTCT+CGG + Chr5:108116850-108116869 MsG0580030199.01.T02:intron 40.0%
TTGGCTGCAGGTATATGATA+GGG + Chr5:108115658-108115677 MsG0580030199.01.T01:intron 40.0%
TTTACCCCCGATTCAAGAAA+TGG + Chr5:108114419-108114438 MsG0580030199.01.T01:CDS 40.0%
TTTCTTGAATCGGGGGTAAA+AGG - Chr5:108114419-108114438 None:intergenic 40.0%
TTTGGCTGCAGGTATATGAT+AGG + Chr5:108115657-108115676 MsG0580030199.01.T01:intron 40.0%
TTTGTTCATCTTCAAGGGCA+GGG + Chr5:108116620-108116639 MsG0580030199.01.T02:intron 40.0%
! AAATTCAGCACCGAGATGAA+AGG + Chr5:108115247-108115266 MsG0580030199.01.T01:intron 40.0%
! AACCCCTGCTTACATTTTTG+AGG + Chr5:108113737-108113756 MsG0580030199.01.T01:CDS 40.0%
! ATTCATTTTGCAGATGCTCC+TGG + Chr5:108113675-108113694 MsG0580030199.01.T01:intron 40.0%
! CCTCTTGAGTTTGCTTCTAT+TGG + Chr5:108113642-108113661 MsG0580030199.01.T01:intron 40.0%
! CTTAGTTCAGTTGGTATGCA+AGG + Chr5:108118737-108118756 MsG0580030199.01.T02:intron 40.0%
! GCTCTATTCCTTTTCAGATC+AGG + Chr5:108115610-108115629 MsG0580030199.01.T01:intron 40.0%
! TGGTGGAAGTTCTTTTGTTG+CGG - Chr5:108119461-108119480 None:intergenic 40.0%
! TTTTGTTCATCTTCAAGGGC+AGG + Chr5:108116619-108116638 MsG0580030199.01.T02:intron 40.0%
!! GCAATCTTGTTCTTTTGGGT+TGG + Chr5:108113297-108113316 MsG0580030199.01.T01:intron 40.0%
!! GCGTGTTCAAATTTTAGCGT+TGG - Chr5:108118349-108118368 None:intergenic 40.0%
!! GTTATTGTGGTTCTGGTGTT+TGG + Chr5:108113210-108113229 MsG0580030199.01.T01:intron 40.0%
!! TTGTCTCTACTTTTCAGCAC+TGG - Chr5:108117847-108117866 None:intergenic 40.0%
!!! CTGGTTTTGCAGTTTCAGAT+GGG + Chr5:108113917-108113936 MsG0580030199.01.T01:intron 40.0%
!!! GGCGCTGATATTTTAAGCAT+AGG + Chr5:108113985-108114004 MsG0580030199.01.T01:intron 40.0%
!!! GTTTTTTCAGTTGTTGCAGC+AGG + Chr5:108119764-108119783 MsG0580030199.01.T02:intron 40.0%
!!! GTTTTTTTGGGTTTTGAGGC+AGG + Chr5:108119806-108119825 MsG0580030199.01.T02:intron 40.0%
!!! TCTGGTTTTGCAGTTTCAGA+TGG + Chr5:108113916-108113935 MsG0580030199.01.T01:intron 40.0%
!!! TGGGGTTTTTTTGGGTTTTG+AGG + Chr5:108119802-108119821 MsG0580030199.01.T02:intron 40.0%
!!! TTGGGTTGGTTTTTTTGGTG+GGG + Chr5:108113311-108113330 MsG0580030199.01.T01:intron 40.0%
AAAAACAGCATAGCACACCC+AGG - Chr5:108119750-108119769 None:intergenic 45.0%
AAATGCAAGGTTGGGGCAAA+TGG - Chr5:108112843-108112862 None:intergenic 45.0%
AAGCATGGCAACAATTGCGA+AGG + Chr5:108115526-108115545 MsG0580030199.01.T01:CDS 45.0%
AAGGGAGAACAGACGAAGAA+GGG - Chr5:108117142-108117161 None:intergenic 45.0%
AATCCCTCAAACATGTCACG+CGG - Chr5:108115137-108115156 None:intergenic 45.0%
AATGCAAGGTTGGGGCAAAT+GGG - Chr5:108112842-108112861 None:intergenic 45.0%
ACGACAGATTCTTTGACGTG+AGG + Chr5:108119535-108119554 MsG0580030199.01.T02:intron 45.0%
AGCATGGCAACAATTGCGAA+GGG + Chr5:108115527-108115546 MsG0580030199.01.T01:CDS 45.0%
ATCAGCGCCACACATATCAA+AGG - Chr5:108113974-108113993 None:intergenic 45.0%
ATGAGTAAACCCCTCACAGA+AGG - Chr5:108116491-108116510 None:intergenic 45.0%
CAAGTCCTCTCCTTTCATCT+CGG - Chr5:108115260-108115279 None:intergenic 45.0%
CACACCATTTCTTGAATCGG+GGG - Chr5:108114426-108114445 None:intergenic 45.0%
CACGAAATCAATAGGCTTCC+TGG + Chr5:108116711-108116730 MsG0580030199.01.T02:intron 45.0%
CAGAAGTAGGAAGCGAAGAA+TGG + Chr5:108115889-108115908 MsG0580030199.01.T01:CDS 45.0%
CATTCTTCGCTTCCTACTTC+TGG - Chr5:108115891-108115910 None:intergenic 45.0%
CCTAAATGCCACCAATATGG+GGG - Chr5:108117266-108117285 None:intergenic 45.0%
CTCACAGAAGGCAGATAGAA+GGG - Chr5:108116479-108116498 None:intergenic 45.0%
CTCTCGGAATTGGAGAAAAC+AGG + Chr5:108116866-108116885 MsG0580030199.01.T02:intron 45.0%
CTGTGCAAGACGAGATGATA+TGG - Chr5:108117218-108117237 None:intergenic 45.0%
CTTCGTGAGCTTAGTTCAGT+TGG + Chr5:108118728-108118747 MsG0580030199.01.T02:intron 45.0%
CTTCTATCTGCCTTCTGTGA+GGG + Chr5:108116478-108116497 MsG0580030199.01.T02:intron 45.0%
GCAACTCTTAGTATGGTGTG+TGG - Chr5:108118393-108118412 None:intergenic 45.0%
GCTTCATGTGCCTTCATTTC+AGG - Chr5:108114952-108114971 None:intergenic 45.0%
GGCATGTAGTTGAACTTGTC+AGG + Chr5:108117565-108117584 MsG0580030199.01.T02:intron 45.0%
GGTAGTTTATGAGAAGAGCG+AGG + Chr5:108114822-108114841 MsG0580030199.01.T01:intron 45.0%
GGTGGTGTTCCGTATATATG+CGG + Chr5:108119911-108119930 MsG0580030199.01.T02:intron 45.0%
GTGTTTGTAGATGGGTAGCA+AGG + Chr5:108114673-108114692 MsG0580030199.01.T01:intron 45.0%
TACCTGCAGCCAAAAAACAG+TGG - Chr5:108115651-108115670 None:intergenic 45.0%
TATATAAGCCCTGCGTTGTG+CGG - Chr5:108117496-108117515 None:intergenic 45.0%
TATTCCAGCCTCATTGTTCG+AGG + Chr5:108119852-108119871 MsG0580030199.01.T02:intron 45.0%
TCACAGAAGGCAGATAGAAG+GGG - Chr5:108116478-108116497 None:intergenic 45.0%
TGAAACATCCCCCATATTGG+TGG + Chr5:108117255-108117274 MsG0580030199.01.T02:intron 45.0%
TGCTACCCATCTACAAACAC+TGG - Chr5:108114673-108114692 None:intergenic 45.0%
TGGCTGCAGGTATATGATAG+GGG + Chr5:108115659-108115678 MsG0580030199.01.T01:intron 45.0%
TGTGTGCAGAAACCAGAAGT+AGG + Chr5:108115876-108115895 MsG0580030199.01.T01:intron 45.0%
TTCTATCTGCCTTCTGTGAG+GGG + Chr5:108116479-108116498 MsG0580030199.01.T02:intron 45.0%
TTGAATCGGGGGTAAAAGGT+AGG - Chr5:108114415-108114434 None:intergenic 45.0%
! ACACATACCTTTGGGAGCAT+CGG - Chr5:108112886-108112905 None:intergenic 45.0%
! TGGAAGTTCTTTTGTTGCGG+TGG - Chr5:108119458-108119477 None:intergenic 45.0%
! TGGGGGATGTTTCAAGTAAG+AGG - Chr5:108117249-108117268 None:intergenic 45.0%
! TTCAGTTGGTATGCAAGGTC+CGG + Chr5:108118742-108118761 MsG0580030199.01.T02:intron 45.0%
! TTTGAAACCGATGCTCCCAA+AGG + Chr5:108112876-108112895 MsG0580030199.01.T01:CDS 45.0%
!! ATTCTTTTTGGGAAGGGGTG+CGG - Chr5:108114185-108114204 None:intergenic 45.0%
!! CCCTGCTTACATTTTTGAGG+AGG + Chr5:108113740-108113759 MsG0580030199.01.T01:CDS 45.0%
!! GTTGGGGCAAATGGGTTTTT+GGG - Chr5:108112834-108112853 None:intergenic 45.0%
!!! ACAATTCTGTTTTGGCTGCC+TGG + Chr5:108119729-108119748 MsG0580030199.01.T02:intron 45.0%
!!! CAATTCTGTTTTGGCTGCCT+GGG + Chr5:108119730-108119749 MsG0580030199.01.T02:intron 45.0%
!!! CCAGTTGGTGGGGTTTTTTT+GGG + Chr5:108119794-108119813 MsG0580030199.01.T02:intron 45.0%
!!! ACTAAATTTTAAATATTTTT+TGG + Chr5:108118660-108118679 MsG0580030199.01.T02:intron 5.0%
!!! TATTTATTTAATCTAAAATA+CGG + Chr5:108118990-108119009 MsG0580030199.01.T02:intron 5.0%
ACAAAGGGCCTCGAACAATG+AGG - Chr5:108119863-108119882 None:intergenic 50.0%
AGGGAGAACAGACGAAGAAG+GGG - Chr5:108117141-108117160 None:intergenic 50.0%
AGGGGAACTCTTGTAGTGTC+AGG + Chr5:108118125-108118144 MsG0580030199.01.T02:intron 50.0%
CAAGATATCCGCACAACGCA+GGG + Chr5:108117485-108117504 MsG0580030199.01.T02:intron 50.0%
CAATTCAATTCGCGGGTCGA+AGG - Chr5:108116677-108116696 None:intergenic 50.0%
CAGTTGTTGCAGCAGGTGTA+AGG + Chr5:108119771-108119790 MsG0580030199.01.T02:intron 50.0%
CCCAAAAAAACCCCACCAAC+TGG - Chr5:108119797-108119816 None:intergenic 50.0%
CCTCACAGAAGGCAGATAGA+AGG - Chr5:108116480-108116499 None:intergenic 50.0%
CCTTCTATCTGCCTTCTGTG+AGG + Chr5:108116477-108116496 MsG0580030199.01.T02:intron 50.0%
CGAGATGAAAGGAGAGGACT+TGG + Chr5:108115258-108115277 MsG0580030199.01.T01:CDS 50.0%
CTTGTAGTGTCAGGTCCATC+TGG + Chr5:108118134-108118153 MsG0580030199.01.T02:intron 50.0%
GAAGGGAGAACAGACGAAGA+AGG - Chr5:108117143-108117162 None:intergenic 50.0%
GATGAAAGGAGAGGACTTGG+AGG + Chr5:108115261-108115280 MsG0580030199.01.T01:CDS 50.0%
GCACCTAGACAATGGTGGTT+CGG + Chr5:108113699-108113718 MsG0580030199.01.T01:CDS 50.0%
GCATGGCAACAATTGCGAAG+GGG + Chr5:108115528-108115547 MsG0580030199.01.T01:CDS 50.0%
GGCAGCTAGCAACACCTATA+TGG - Chr5:108117939-108117958 None:intergenic 50.0%
GGCTGCAAAGAGACGAAATG+AGG + Chr5:108119509-108119528 MsG0580030199.01.T02:intron 50.0%
GTGCTGCGGAGAATAAAGTG+AGG + Chr5:108118449-108118468 MsG0580030199.01.T02:intron 50.0%
TCAAGATATCCGCACAACGC+AGG + Chr5:108117484-108117503 MsG0580030199.01.T02:intron 50.0%
TCATTGTTCGAGGCCCTTTG+TGG + Chr5:108119862-108119881 MsG0580030199.01.T02:intron 50.0%
TCCTGGAAGAGCAGCAAACA+TGG - Chr5:108113048-108113067 None:intergenic 50.0%
TTGCCGCGTGACATGTTTGA+GGG + Chr5:108115131-108115150 MsG0580030199.01.T01:intron 50.0%
! CCCCCATATTGGTGGCATTT+AGG + Chr5:108117263-108117282 MsG0580030199.01.T02:intron 50.0%
! TCAGTTGGTATGCAAGGTCC+GGG + Chr5:108118743-108118762 MsG0580030199.01.T02:intron 50.0%
! TCCATGTTTGCTGCTCTTCC+AGG + Chr5:108113044-108113063 MsG0580030199.01.T01:intron 50.0%
! TTGATGAGGGTACAGAGAGC+TGG + Chr5:108117809-108117828 MsG0580030199.01.T02:intron 50.0%
! TTTCTCTCCCACTGACTGCT+CGG + Chr5:108115729-108115748 MsG0580030199.01.T01:CDS 50.0%
!! CTAGACAATGGTGGTTCGGT+GGG + Chr5:108113703-108113722 MsG0580030199.01.T01:CDS 50.0%
!! GGTTGGGGCAAATGGGTTTT+TGG - Chr5:108112835-108112854 None:intergenic 50.0%
!! TAGACAATGGTGGTTCGGTG+GGG + Chr5:108113704-108113723 MsG0580030199.01.T01:CDS 50.0%
!!! GCCAGTTGGTGGGGTTTTTT+TGG + Chr5:108119793-108119812 MsG0580030199.01.T02:intron 50.0%
!!! TGCCACTGTTTTTTGGCTGC+AGG + Chr5:108115646-108115665 MsG0580030199.01.T01:intron 50.0%
AACGACGACTGGTGAGGCAA+TGG + Chr5:108119482-108119501 MsG0580030199.01.T02:intron 55.0%
ACTTCCACCACAACGACGAC+TGG + Chr5:108119471-108119490 MsG0580030199.01.T02:intron 55.0%
ATCTTCAAGGGCAGGGAGAG+TGG + Chr5:108116627-108116646 MsG0580030199.01.T02:intron 55.0%
ATTCCCACCGAGCAGTCAGT+GGG - Chr5:108115739-108115758 None:intergenic 55.0%
CACCATTGTCTAGGTGCTCC+AGG - Chr5:108113696-108113715 None:intergenic 55.0%
CAGGTGTAAGGCCAGTTGGT+GGG + Chr5:108119783-108119802 MsG0580030199.01.T02:intron 55.0%
CCACCGAACCACCATTGTCT+AGG - Chr5:108113705-108113724 None:intergenic 55.0%
GTTGCCGCGTGACATGTTTG+AGG + Chr5:108115130-108115149 MsG0580030199.01.T01:intron 55.0%
TATTCCCACCGAGCAGTCAG+TGG - Chr5:108115740-108115759 None:intergenic 55.0%
TGGTGGTCAGGGTTTGAACC+CGG - Chr5:108118764-108118783 None:intergenic 55.0%
! AGGTGTAAGGCCAGTTGGTG+GGG + Chr5:108119784-108119803 MsG0580030199.01.T02:intron 55.0%
! CAGCACCGAGATGAAAGGAG+AGG + Chr5:108115252-108115271 MsG0580030199.01.T01:intron 55.0%
! CCTAGACAATGGTGGTTCGG+TGG + Chr5:108113702-108113721 MsG0580030199.01.T01:CDS 55.0%
! CTCCTGGAGCACCTAGACAA+TGG + Chr5:108113691-108113710 MsG0580030199.01.T01:CDS 55.0%
! CTGGAGCACCTAGACAATGG+TGG + Chr5:108113694-108113713 MsG0580030199.01.T01:CDS 55.0%
! GGAAGGGGTGCGGATGTAAA+AGG - Chr5:108114175-108114194 None:intergenic 55.0%
!! AGACAATGGTGGTTCGGTGG+GGG + Chr5:108113705-108113724 MsG0580030199.01.T01:CDS 55.0%
AGGGCCTCGAACAATGAGGC+TGG - Chr5:108119859-108119878 None:intergenic 60.0%
CACCACAACGACGACTGGTG+AGG + Chr5:108119476-108119495 MsG0580030199.01.T02:intron 60.0%
CTCACCAGTCGTCGTTGTGG+TGG - Chr5:108119478-108119497 None:intergenic 60.0%
GACGACTGGTGAGGCAATGG+TGG + Chr5:108119485-108119504 MsG0580030199.01.T02:intron 60.0%
GACTGGTGAGGCAATGGTGG+CGG + Chr5:108119488-108119507 MsG0580030199.01.T02:intron 60.0%
GCAGCAGGTGTAAGGCCAGT+TGG + Chr5:108119779-108119798 MsG0580030199.01.T02:intron 60.0%
GCAGGTGTAAGGCCAGTTGG+TGG + Chr5:108119782-108119801 MsG0580030199.01.T02:intron 60.0%
TGCCTCACCAGTCGTCGTTG+TGG - Chr5:108119481-108119500 None:intergenic 60.0%
! TCTCCCACTGACTGCTCGGT+GGG + Chr5:108115733-108115752 MsG0580030199.01.T01:CDS 60.0%
! CTCTCCCACTGACTGCTCGG+TGG + Chr5:108115732-108115751 MsG0580030199.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 108112798 108120041 108112798 ID=MsG0580030199.01;Name=MsG0580030199.01
Chr5 mRNA 108112798 108116242 108112798 ID=MsG0580030199.01.T01;Parent=MsG0580030199.01;Name=MsG0580030199.01.T01;_AED=0.50;_eAED=0.51;_QI=0|1|0.87|1|0.85|0.75|8|217|219
Chr5 exon 108115885 108116128 108115885 ID=MsG0580030199.01.T01:exon:15218;Parent=MsG0580030199.01.T01
Chr5 exon 108116201 108116242 108116201 ID=MsG0580030199.01.T01:exon:15219;Parent=MsG0580030199.01.T01
Chr5 CDS 108112798 108112897 108112798 ID=MsG0580030199.01.T01:cds;Parent=MsG0580030199.01.T01
Chr5 CDS 108113688 108113782 108113688 ID=MsG0580030199.01.T01:cds;Parent=MsG0580030199.01.T01
Chr5 CDS 108114382 108114465 108114382 ID=MsG0580030199.01.T01:cds;Parent=MsG0580030199.01.T01
Chr5 CDS 108115255 108115342 108115255 ID=MsG0580030199.01.T01:cds;Parent=MsG0580030199.01.T01
Chr5 CDS 108115448 108115572 108115448 ID=MsG0580030199.01.T01:cds;Parent=MsG0580030199.01.T01
Chr5 CDS 108115668 108115766 108115668 ID=MsG0580030199.01.T01:cds;Parent=MsG0580030199.01.T01
Chr5 CDS 108115885 108115953 108115885 ID=MsG0580030199.01.T01:cds;Parent=MsG0580030199.01.T01
Chr5 three_prime_UTR 108115954 108116128 108115954 ID=MsG0580030199.01.T01:three_prime_utr;Parent=MsG0580030199.01.T01
Chr5 three_prime_UTR 108116201 108116242 108116201 ID=MsG0580030199.01.T01:three_prime_utr;Parent=MsG0580030199.01.T01
Chr5 mRNA 108112798 108120041 108112798 ID=MsG0580030199.01.T02;Parent=MsG0580030199.01;Name=MsG0580030199.01.T02;_AED=0.50;_eAED=0.51;_QI=0|1|0.87|1|0.85|0.75|8|216|219
Chr5 exon 108115885 108116130 108115885 ID=MsG0580030199.01.T02:exon:15220;Parent=MsG0580030199.01.T02
Chr5 exon 108120003 108120041 108120003 ID=MsG0580030199.01.T02:exon:15221;Parent=MsG0580030199.01.T02
Chr5 CDS 108112798 108112897 108112798 ID=MsG0580030199.01.T02:cds;Parent=MsG0580030199.01.T02
Chr5 CDS 108113688 108113782 108113688 ID=MsG0580030199.01.T02:cds;Parent=MsG0580030199.01.T02
Chr5 CDS 108114382 108114465 108114382 ID=MsG0580030199.01.T02:cds;Parent=MsG0580030199.01.T02
Chr5 CDS 108115255 108115342 108115255 ID=MsG0580030199.01.T02:cds;Parent=MsG0580030199.01.T02
Chr5 CDS 108115448 108115572 108115448 ID=MsG0580030199.01.T02:cds;Parent=MsG0580030199.01.T02
Chr5 CDS 108115668 108115766 108115668 ID=MsG0580030199.01.T02:cds;Parent=MsG0580030199.01.T02
Chr5 CDS 108115885 108115953 108115885 ID=MsG0580030199.01.T02:cds;Parent=MsG0580030199.01.T02
Chr5 three_prime_UTR 108115954 108116130 108115954 ID=MsG0580030199.01.T02:three_prime_utr;Parent=MsG0580030199.01.T02
Chr5 three_prime_UTR 108120003 108120041 108120003 ID=MsG0580030199.01.T02:three_prime_utr;Parent=MsG0580030199.01.T02
Gene Sequence

>MsG0580030199.01.T02

ATGTCTTTCGTTCTATATGTTCAGGTTTTACATCCCAAAAACCCATTTGCCCCAACCTTGCATTTCAATTATCGCTATTTTGAAACCGATGCTCCCAAAGATGCTCCTGGAGCACCTAGACAATGGTGGTTCGGTGGGGGAACCGACTTAACCCCTGCTTACATTTTTGAGGAGGATGTCAAGCACTTCCATTCAGTTCAAAAACAGGCTTGTGACAAGTTTGATCCTACCTTTTACCCCCGATTCAAGAAATGGTGTGATGATTACTTTTATATCAAGCACCGAGATGAAAGGAGAGGACTTGGAGGAATATTTTTTGATGATCTAAATGACTATGATCAAGAGATGCTTCTTTCCTTTGCTACTGAATGTGCAAACTCTGTTATTCCCGCTTATATACCTATCATAGAGAAAAGGAAGGATTTGCCCTTCACAGATCATCAGAAAGCATGGCAACAATTGCGAAGGGGACGATATGTTGAATTTAATTTGGTATATGATAGGGGTACAACATTTGGACTAAAAACTGGAGGTAGAATAGAGAGTATTCTTGTTTCTCTCCCACTGACTGCTCGGTGGGAATATGATCATAAACCAGAAGTAGGAAGCGAAGAATGGAAACTCTTAGATGCATGCATTAACCCAAAGGAATGGCTCTAA

>MsG0580030199.01.T01

ATGTCTTTCGTTCTATATGTTCAGGTTTTACATCCCAAAAACCCATTTGCCCCAACCTTGCATTTCAATTATCGCTATTTTGAAACCGATGCTCCCAAAGATGCTCCTGGAGCACCTAGACAATGGTGGTTCGGTGGGGGAACCGACTTAACCCCTGCTTACATTTTTGAGGAGGATGTCAAGCACTTCCATTCAGTTCAAAAACAGGCTTGTGACAAGTTTGATCCTACCTTTTACCCCCGATTCAAGAAATGGTGTGATGATTACTTTTATATCAAGCACCGAGATGAAAGGAGAGGACTTGGAGGAATATTTTTTGATGATCTAAATGACTATGATCAAGAGATGCTTCTTTCCTTTGCTACTGAATGTGCAAACTCTGTTATTCCCGCTTATATACCTATCATAGAGAAAAGGAAGGATTTGCCCTTCACAGATCATCAGAAAGCATGGCAACAATTGCGAAGGGGACGATATGTTGAATTTAATTTGGTATATGATAGGGGTACAACATTTGGACTAAAAACTGGAGGTAGAATAGAGAGTATTCTTGTTTCTCTCCCACTGACTGCTCGGTGGGAATATGATCATAAACCAGAAGTAGGAAGCGAAGAATGGAAACTCTTAGATGCATGCATTAACCCAAAGGAATGGCTCTAA
Protein sequence

>MsG0580030199.01.T02

MSFVLYVQVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSVQKQACDKFDPTFYPRFKKWCDDYFYIKHRDERRGLGGIFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDLPFTDHQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHKPEVGSEEWKLLDACINPKEWL*

>MsG0580030199.01.T01

MSFVLYVQVLHPKNPFAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFEEDVKHFHSVQKQACDKFDPTFYPRFKKWCDDYFYIKHRDERRGLGGIFFDDLNDYDQEMLLSFATECANSVIPAYIPIIEKRKDLPFTDHQKAWQQLRRGRYVEFNLVYDRGTTFGLKTGGRIESILVSLPLTARWEYDHKPEVGSEEWKLLDACINPKEWL*