AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030671.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030671.01.T01 MTR_4g112080 84.000 325 14 2 1 291 1 321 0.0 547
MsG0680030671.01.T01 MTR_3g073550 74.462 325 45 2 1 291 1 321 1.52e-170 479
MsG0680030671.01.T01 MTR_4g112080 80.567 247 10 2 1 213 1 243 7.24e-141 401
MsG0680030671.01.T01 MTR_4g111720 95.000 100 5 0 289 388 142 241 1.33e-61 201
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030671.01.T01 AT1G12350 56.151 317 103 2 7 289 1 315 5.31e-115 338
MsG0680030671.01.T01 AT1G12350 56.151 317 103 2 7 289 1 315 5.31e-115 338
MsG0680030671.01.T01 AT5G02080 56.129 310 99 2 14 289 1 307 2.76e-112 331
MsG0680030671.01.T01 AT5G02080 55.660 318 96 4 14 289 1 315 1.82e-110 326
MsG0680030671.01.T01 AT5G02080 54.296 291 74 3 33 289 3 268 1.46e-95 286
MsG0680030671.01.T01 AT5G02080 50.645 310 87 4 14 289 1 278 3.13e-90 273
MsG0680030671.01.T01 AT5G02080 48.718 234 54 4 14 213 1 202 1.90e-64 206
MsG0680030671.01.T01 AT5G02080 49.744 195 62 2 131 289 20 214 1.71e-47 161
MsG0680030671.01.T01 AT5G02080 51.462 171 49 1 153 289 45 215 7.72e-43 149
MsG0680030671.01.T01 AT1G74070 61.224 98 36 1 291 388 137 232 2.33e-30 118
MsG0680030671.01.T01 AT1G74070 61.224 98 36 1 291 388 137 232 3.63e-30 118

Find 102 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATATCATTGATGTTAAT+TGG 0.096269 6:+6958433 MsG0680030671.01.T01:five_prime_UTR
AACTTAGGAGGTGGCTTTAA+TGG 0.203347 6:-6962697 None:intergenic
TTCAAGCATTCTTCTAAATA+AGG 0.240840 6:+6962028 MsG0680030671.01.T01:CDS
ACTGGAATCCTCAATATAAA+TGG 0.296811 6:-6962228 None:intergenic
TAACAAAACAGGAAGCAATT+TGG 0.303924 6:+6962579 MsG0680030671.01.T01:CDS
TAACTTGTGCTTCAAGGGTT+TGG 0.304623 6:-6959346 None:intergenic
TGAAAACAGAATGGAAGATA+TGG 0.312703 6:+6959322 MsG0680030671.01.T01:CDS
ATGACAAATTATGTCCCATT+TGG 0.315891 6:-6962778 None:intergenic
TAGGAAAGATTGGGCTCCTT+TGG 0.344009 6:+6961516 MsG0680030671.01.T01:CDS
CACCATATTTGAATATCTTC+AGG 0.360802 6:+6960691 MsG0680030671.01.T01:CDS
AGAATTGTTTGTGTAACTTC+TGG 0.363349 6:+6959564 MsG0680030671.01.T01:CDS
GCCACCTCCTAAGTTTAAAC+TGG 0.368651 6:+6962705 MsG0680030671.01.T01:CDS
CATCCACCCCATAGGATCTA+AGG 0.375393 6:-6962546 None:intergenic
AACCTGAAGATATTCAAATA+TGG 0.376953 6:-6960693 None:intergenic
TCATATCATTGATGTTAATT+GGG 0.381278 6:+6958434 MsG0680030671.01.T01:five_prime_UTR
ACTTAGGAGGTGGCTTTAAT+GGG 0.382631 6:-6962696 None:intergenic
CCGCCATGTTGGACGTAATT+CGG 0.383851 6:-6962523 None:intergenic
CATGGCGGCCTTAGATCCTA+TGG 0.389798 6:+6962538 MsG0680030671.01.T01:CDS
TCAGGAAGGGGTCTGCAAAA+TGG 0.393232 6:-6959918 None:intergenic
CAACGTAATTCTTCATCATC+AGG 0.399034 6:+6959440 MsG0680030671.01.T01:CDS
TGACAAATTATGTCCCATTT+GGG 0.407464 6:-6962777 None:intergenic
TATGTTGACAACTTCAGTTC+AGG 0.409846 6:+6959624 MsG0680030671.01.T01:CDS
TGCAGGTACTTTCTGAAGGC+TGG 0.411458 6:+6959757 MsG0680030671.01.T01:intron
CTTGCAACCAGTTTAAACTT+AGG 0.413428 6:-6962712 None:intergenic
TGTCAGTGCTTAGGAAAGAT+TGG 0.417143 6:+6961506 MsG0680030671.01.T01:CDS
ACCTTGAATGTTTAAGTCGT+TGG 0.428741 6:-6959970 None:intergenic
GAGACATGCCATTTATATTG+AGG 0.429580 6:+6962220 MsG0680030671.01.T01:CDS
CTTTATATTAAATCTCACTT+TGG 0.434249 6:+6958529 MsG0680030671.01.T01:five_prime_UTR
AGATTTAATATAAAGAATAT+AGG 0.441772 6:-6958521 None:intergenic
AGAATGTATGAGAAATGTCC+TGG 0.443238 6:+6962631 MsG0680030671.01.T01:CDS
AGGCTTTAACTTGTGCTTCA+AGG 0.445683 6:-6959352 None:intergenic
GCGGAGCTTGCTAACAAAAC+AGG 0.446987 6:+6962568 MsG0680030671.01.T01:CDS
CTCTGAAAGAAGTTTAATCA+AGG 0.448066 6:-6962198 None:intergenic
TGGCGGTACCACTGCTCCAT+TGG 0.451773 6:+6959584 MsG0680030671.01.T01:CDS
TTTAAACTGGTTGCAAGACT+AGG 0.453783 6:+6962718 MsG0680030671.01.T01:CDS
AAAAGGAAAACCTTGAGTTT+CGG 0.454010 6:-6958401 None:intergenic
CGGACGCACCGTTGCTCCAA+TGG 0.458558 6:-6959600 None:intergenic
GAAGTTGGAACTGACCCAAA+TGG 0.459093 6:+6962763 MsG0680030671.01.T01:CDS
GTCAGTGCTTAGGAAAGATT+GGG 0.461847 6:+6961507 MsG0680030671.01.T01:CDS
ACCAACGACTTAAACATTCA+AGG 0.462743 6:+6959969 MsG0680030671.01.T01:CDS
GATATGATATTGAAAAGAAA+AGG 0.480987 6:-6958418 None:intergenic
GAGATTGATCAAGAAGAAGT+TGG 0.483673 6:+6962748 MsG0680030671.01.T01:CDS
GAGCAAGTGGTGGTCACCAC+TGG 0.485051 6:+6962116 MsG0680030671.01.T01:CDS
ATTCCACTGCAGGCAGTAGC+AGG 0.485752 6:+6960641 MsG0680030671.01.T01:intron
TCAGTCAGGAACTCACCTCT+TGG 0.488080 6:+6961453 MsG0680030671.01.T01:CDS
GGGCTCGAAGCATTCAAGTA+AGG 0.489965 6:-6959946 None:intergenic
GGCTTTAACTTGTGCTTCAA+GGG 0.493190 6:-6959351 None:intergenic
CATTCAAGTAAGGGATCCTC+AGG 0.498718 6:-6959936 None:intergenic
TTAAACTGGTTGCAAGACTA+GGG 0.504883 6:+6962719 MsG0680030671.01.T01:CDS
AAGTTGGAACTGACCCAAAT+GGG 0.506201 6:+6962764 MsG0680030671.01.T01:CDS
ACTTTGCAGGTACTTTCTGA+AGG 0.511073 6:+6959753 MsG0680030671.01.T01:intron
AGGATCTAAGGCCGCCATGT+TGG 0.511340 6:-6962534 None:intergenic
TGTATCATACTCGGTGGATG+TGG 0.516232 6:-6959658 None:intergenic
GTGTTGAGAATATTACTGTT+CGG 0.518736 6:+6962138 MsG0680030671.01.T01:CDS
TTGAATGTTTAAGTCGTTGG+TGG 0.522161 6:-6959967 None:intergenic
ATGCTGTTATCTTTCTGTAC+CGG 0.522317 6:+6959782 MsG0680030671.01.T01:CDS
AACTTCAGTTCAGGTCATAG+AGG 0.523963 6:+6959633 MsG0680030671.01.T01:CDS
GAAGGGGTCTGCAAAATGGC+TGG 0.524795 6:-6959914 None:intergenic
CCTCAGAAAATGGGGAAGCT+AGG 0.526578 6:+6959541 MsG0680030671.01.T01:intron
GAAAACAGAATGGAAGATAT+GGG 0.526880 6:+6959323 MsG0680030671.01.T01:CDS
CGGTAATTAGAATTCTAATG+AGG 0.528265 6:-6958381 None:intergenic
TCTGAAAGAAGTTTAATCAA+GGG 0.531193 6:-6962197 None:intergenic
ACCAGTTTAAACTTAGGAGG+TGG 0.532545 6:-6962706 None:intergenic
TGAATGTTTAAGTCGTTGGT+GGG 0.540259 6:-6959966 None:intergenic
GTGGAGCACAAAATTCAGTC+AGG 0.541342 6:+6961439 MsG0680030671.01.T01:CDS
ATTCTAATTACCGAAACTCA+AGG 0.542090 6:+6958391 MsG0680030671.01.T01:five_prime_UTR
ATGGCGGCCTTAGATCCTAT+GGG 0.543875 6:+6962539 MsG0680030671.01.T01:CDS
GCAACCAGTTTAAACTTAGG+AGG 0.546988 6:-6962709 None:intergenic
TAGATCCTATGGGGTGGATG+CGG 0.551281 6:+6962549 MsG0680030671.01.T01:CDS
GGCTCGAAGCATTCAAGTAA+GGG 0.559187 6:-6959945 None:intergenic
TGAGAGTTCATTTGCAACAA+CGG 0.559415 6:-6962084 None:intergenic
ATTTCATGACTGTTGTGCAA+AGG 0.563138 6:-6959392 None:intergenic
GATGGATGCTGAAAACAGAA+TGG 0.565683 6:+6959313 MsG0680030671.01.T01:exon
CAAGTAAGGGATCCTCAGGA+AGG 0.571632 6:-6959932 None:intergenic
CCACTGCTCCATTGGAGCAA+CGG 0.572277 6:+6959592 MsG0680030671.01.T01:CDS
TCATGACTGTTGTGCAAAGG+AGG 0.574303 6:-6959389 None:intergenic
ACTTCAGTTCAGGTCATAGA+GGG 0.576075 6:+6959634 MsG0680030671.01.T01:CDS
AAGCTCCGCATCCACCCCAT+AGG 0.584857 6:-6962554 None:intergenic
TATTCAAATATGGTGCTGAA+AGG 0.593188 6:-6960683 None:intergenic
CTGTTATCTTTCTGTACCGG+AGG 0.595260 6:+6959785 MsG0680030671.01.T01:CDS
TTTATATTGAGGATTCCAGT+AGG 0.599137 6:+6962231 MsG0680030671.01.T01:CDS
AGTAAGGGATCCTCAGGAAG+GGG 0.599151 6:-6959930 None:intergenic
AAGTAAGGGATCCTCAGGAA+GGG 0.600714 6:-6959931 None:intergenic
CTCAACTCGGAAGGAGCAAG+TGG 0.603395 6:+6962103 MsG0680030671.01.T01:CDS
AAATGAACTCTCAACTCGGA+AGG 0.607353 6:+6962094 MsG0680030671.01.T01:CDS
GAATGTATGAGAAATGTCCT+GGG 0.610046 6:+6962632 MsG0680030671.01.T01:CDS
AAAGATACGCAGAATGCCAA+AGG 0.612465 6:-6961532 None:intergenic
ATTGTTTGTGTAACTTCTGG+CGG 0.615222 6:+6959567 MsG0680030671.01.T01:CDS
CGGCCTTAGATCCTATGGGG+TGG 0.615240 6:+6962543 MsG0680030671.01.T01:CDS
AGCAGTGAAGAGTGCTATCG+TGG 0.617711 6:+6960469 MsG0680030671.01.T01:CDS
AACTCGGAAGGAGCAAGTGG+TGG 0.626926 6:+6962106 MsG0680030671.01.T01:CDS
CCGTTGCTCCAATGGAGCAG+TGG 0.633468 6:-6959592 None:intergenic
ATGCCGAATTACGTCCAACA+TGG 0.635402 6:+6962520 MsG0680030671.01.T01:CDS
TAATTAGAATTCTAATGAGG+AGG 0.639735 6:-6958378 None:intergenic
CCACTGCAGGCAGTAGCAGG+CGG 0.641496 6:+6960644 MsG0680030671.01.T01:intron
TTGCAAATGAACTCTCAACT+CGG 0.647764 6:+6962090 MsG0680030671.01.T01:CDS
GAACAAGCTTTACGTCCAAG+AGG 0.657272 6:-6961468 None:intergenic
AGTAATATTCTCAACACCAG+TGG 0.679347 6:-6962132 None:intergenic
CCGAATTACGTCCAACATGG+CGG 0.693184 6:+6962523 MsG0680030671.01.T01:CDS
TGGCGGCCTTAGATCCTATG+GGG 0.704631 6:+6962540 MsG0680030671.01.T01:CDS
CTTCAGTTCAGGTCATAGAG+GGG 0.724824 6:+6959635 MsG0680030671.01.T01:CDS
AACTGAAGTTGTCAACATAG+CGG 0.729501 6:-6959620 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATTTAATATAAAGAATAT+AGG - Chr6:6958524-6958543 None:intergenic 10.0%
!! AACAAATCAAATTAAAGAAA+AGG - Chr6:6959834-6959853 None:intergenic 15.0%
!! AGTATTAAGAAATTAAACTA+TGG - Chr6:6962419-6962438 None:intergenic 15.0%
!! TTTATGTAAGTTATAATTGT+AGG + Chr6:6960905-6960924 MsG0680030671.01.T01:intron 15.0%
!!! ATAGCAATAATATTTTGATA+CGG + Chr6:6961638-6961657 MsG0680030671.01.T01:intron 15.0%
!! AAATTAGTGTTTAGACAATA+TGG + Chr6:6961237-6961256 MsG0680030671.01.T01:intron 20.0%
!! ATCATATCATTGATGTTAAT+TGG + Chr6:6958433-6958452 MsG0680030671.01.T01:five_prime_UTR 20.0%
!! CTTTATATTAAATCTCACTT+TGG + Chr6:6958529-6958548 MsG0680030671.01.T01:five_prime_UTR 20.0%
!! GATATGATATTGAAAAGAAA+AGG - Chr6:6958421-6958440 None:intergenic 20.0%
!! GCTAATGTTCAATTATAAAA+AGG - Chr6:6960579-6960598 None:intergenic 20.0%
!! TCATATCATTGATGTTAATT+GGG + Chr6:6958434-6958453 MsG0680030671.01.T01:five_prime_UTR 20.0%
!! TGGCTAAAATGAATATTTAT+CGG + Chr6:6961155-6961174 MsG0680030671.01.T01:intron 20.0%
!! TGTTAATTTCTAAATATCCT+TGG - Chr6:6961805-6961824 None:intergenic 20.0%
!! TTACAATTGTGTCAAAATAA+GGG + Chr6:6962455-6962474 MsG0680030671.01.T01:intron 20.0%
!! TTTACAATTGTGTCAAAATA+AGG + Chr6:6962454-6962473 MsG0680030671.01.T01:intron 20.0%
!!! AATATATTAGATTAGTTACC+TGG - Chr6:6958594-6958613 None:intergenic 20.0%
!!! ACAATAGTTTGTATGATTTT+AGG - Chr6:6960050-6960069 None:intergenic 20.0%
!!! TTTGCTTCTTTATTTTAGTT+CGG + Chr6:6960432-6960451 MsG0680030671.01.T01:intron 20.0%
! AAAAATCTGAGCTTTCAAAT+TGG - Chr6:6958561-6958580 None:intergenic 25.0%
! AACCTGAAGATATTCAAATA+TGG - Chr6:6960696-6960715 None:intergenic 25.0%
! AAGTCACTAAAGTTGTTATA+AGG - Chr6:6958624-6958643 None:intergenic 25.0%
! ACATAGTACTAACTTTCTAA+AGG + Chr6:6961756-6961775 MsG0680030671.01.T01:intron 25.0%
! AGTTTATTACAAAGAGAACA+AGG - Chr6:6959688-6959707 None:intergenic 25.0%
! AGTTTATTCTTCTTTAAGTG+TGG - Chr6:6961731-6961750 None:intergenic 25.0%
! ATTATTGTTAAAGCTACAGA+AGG + Chr6:6962479-6962498 MsG0680030671.01.T01:intron 25.0%
! CAAAAAATATTCCAAAACTC+GGG - Chr6:6958730-6958749 None:intergenic 25.0%
! CCAAAAAATATTCCAAAACT+CGG - Chr6:6958731-6958750 None:intergenic 25.0%
! GTTTATTCTTCTTTAAGTGT+GGG - Chr6:6961730-6961749 None:intergenic 25.0%
! TAATTAGAATTCTAATGAGG+AGG - Chr6:6958381-6958400 None:intergenic 25.0%
! TAATTTCTAAATATCCTTGG+TGG - Chr6:6961802-6961821 None:intergenic 25.0%
! TACCAATGAATATTTATGCA+GGG + Chr6:6959884-6959903 MsG0680030671.01.T01:intron 25.0%
! TCTGAAAGAAGTTTAATCAA+GGG - Chr6:6962200-6962219 None:intergenic 25.0%
! TGTATTTACACAAGAAACTA+AGG - Chr6:6961263-6961282 None:intergenic 25.0%
! TTACCAATGAATATTTATGC+AGG + Chr6:6959883-6959902 MsG0680030671.01.T01:intron 25.0%
! TTCAAGCATTCTTCTAAATA+AGG + Chr6:6962028-6962047 MsG0680030671.01.T01:CDS 25.0%
! TTGCATACAATTTATGATGA+TGG + Chr6:6959247-6959266 MsG0680030671.01.T01:intron 25.0%
!! AAATGCCACTTAAAAATGAA+TGG - Chr6:6962349-6962368 None:intergenic 25.0%
!! GAAAGTATATAGACACATAT+TGG - Chr6:6960237-6960256 None:intergenic 25.0%
!! TATCTTTTTATTGCGTGAAA+CGG - Chr6:6960015-6960034 None:intergenic 25.0%
!!! AAATGATTTGTGTGGTTTTT+GGG + Chr6:6959517-6959536 MsG0680030671.01.T01:intron 25.0%
!!! AGATTTTTTCATCTAATTCC+AGG + Chr6:6958573-6958592 MsG0680030671.01.T01:five_prime_UTR 25.0%
!!! ATACAATTTATGATGATGGT+TGG + Chr6:6959251-6959270 MsG0680030671.01.T01:intron 25.0%
!!! CAGTAGAATCATTTTTTGAT+CGG + Chr6:6958950-6958969 MsG0680030671.01.T01:intron 25.0%
!!! CGTATCTTTTAAGGTATTAA+TGG + Chr6:6961546-6961565 MsG0680030671.01.T01:intron 25.0%
!!! TAAATGATTTGTGTGGTTTT+TGG + Chr6:6959516-6959535 MsG0680030671.01.T01:intron 25.0%
!!! TTCTTTGTGTTGTTATTTGT+TGG + Chr6:6958800-6958819 MsG0680030671.01.T01:intron 25.0%
!!! TTTTCAAGGCATTACAATTT+TGG + Chr6:6962308-6962327 MsG0680030671.01.T01:intron 25.0%
!!! TTTTGCTGCTGTTTAATTAT+TGG + Chr6:6958761-6958780 MsG0680030671.01.T01:intron 25.0%
AAAAGGAAAACCTTGAGTTT+CGG - Chr6:6958404-6958423 None:intergenic 30.0%
ACCAATGAATATTTATGCAG+GGG + Chr6:6959885-6959904 MsG0680030671.01.T01:intron 30.0%
ACCACACAAATCATTTAGAA+TGG - Chr6:6959513-6959532 None:intergenic 30.0%
ACTGGAATCCTCAATATAAA+TGG - Chr6:6962231-6962250 None:intergenic 30.0%
ACTTAAAAATGAATGGCAAG+AGG - Chr6:6962342-6962361 None:intergenic 30.0%
AGAATTGTTTGTGTAACTTC+TGG + Chr6:6959564-6959583 MsG0680030671.01.T01:CDS 30.0%
AGCAATTCTTATCTATGTGT+CGG - Chr6:6961979-6961998 None:intergenic 30.0%
AGTGTCTATCAAAAAGGTAA+AGG - Chr6:6961601-6961620 None:intergenic 30.0%
ATATATACCATATCCTTCCA+AGG - Chr6:6961080-6961099 None:intergenic 30.0%
ATATGGCATCAAAACTTTCA+TGG - Chr6:6961124-6961143 None:intergenic 30.0%
ATGCCATATGACTTTAATCT+TGG + Chr6:6961135-6961154 MsG0680030671.01.T01:intron 30.0%
ATGTAATTATAGCCTCATTG+TGG + Chr6:6960613-6960632 MsG0680030671.01.T01:intron 30.0%
ATTCTAATTACCGAAACTCA+AGG + Chr6:6958391-6958410 MsG0680030671.01.T01:five_prime_UTR 30.0%
CAATTCAGTGTCTATCAAAA+AGG - Chr6:6961607-6961626 None:intergenic 30.0%
CACCATATTTGAATATCTTC+AGG + Chr6:6960691-6960710 MsG0680030671.01.T01:CDS 30.0%
CACGCAATAAAAAGATAAAG+AGG + Chr6:6960018-6960037 MsG0680030671.01.T01:intron 30.0%
CGGTAATTAGAATTCTAATG+AGG - Chr6:6958384-6958403 None:intergenic 30.0%
CTTAAAAATGAATGGCAAGA+GGG - Chr6:6962341-6962360 None:intergenic 30.0%
GAAAACAGAATGGAAGATAT+GGG + Chr6:6959323-6959342 MsG0680030671.01.T01:CDS 30.0%
GCATAAGATATGCTAAAAAC+AGG - Chr6:6959033-6959052 None:intergenic 30.0%
GTGTTGAGAATATTACTGTT+CGG + Chr6:6962138-6962157 MsG0680030671.01.T01:CDS 30.0%
GTTAGACACTGAATTCTATA+TGG + Chr6:6961574-6961593 MsG0680030671.01.T01:intron 30.0%
TAACAAAACAGGAAGCAATT+TGG + Chr6:6962579-6962598 MsG0680030671.01.T01:CDS 30.0%
TAGATTCATTTAGATGCTCT+CGG + Chr6:6958654-6958673 MsG0680030671.01.T01:intron 30.0%
TAGCCAAGATTAAAGTCATA+TGG - Chr6:6961141-6961160 None:intergenic 30.0%
TCGAAGTAGTTATGTTTGTT+GGG + Chr6:6958979-6958998 MsG0680030671.01.T01:intron 30.0%
TCTATTATCTTGAGAGTAAC+AGG + Chr6:6959721-6959740 MsG0680030671.01.T01:intron 30.0%
TGAAAACAGAATGGAAGATA+TGG + Chr6:6959322-6959341 MsG0680030671.01.T01:CDS 30.0%
TGATTACTACAATCAACCAT+GGG + Chr6:6960818-6960837 MsG0680030671.01.T01:intron 30.0%
TGCATGTTATTCATGTTGTA+TGG + Chr6:6960133-6960152 MsG0680030671.01.T01:intron 30.0%
TTCGAAGTAGTTATGTTTGT+TGG + Chr6:6958978-6958997 MsG0680030671.01.T01:intron 30.0%
TTTATATTGAGGATTCCAGT+AGG + Chr6:6962231-6962250 MsG0680030671.01.T01:CDS 30.0%
! AGAGCATCTAAATGAATCTA+CGG - Chr6:6958654-6958673 None:intergenic 30.0%
! ATCTTTTTATTGCGTGAAAC+GGG - Chr6:6960014-6960033 None:intergenic 30.0%
! ATTATCTATGTTTTCCACCA+AGG + Chr6:6961785-6961804 MsG0680030671.01.T01:intron 30.0%
! CTCTGAAAGAAGTTTAATCA+AGG - Chr6:6962201-6962220 None:intergenic 30.0%
! CTGCTGTTTAATTATTGGTT+CGG + Chr6:6958766-6958785 MsG0680030671.01.T01:intron 30.0%
! GTTTGTATGATTTTAGGCAT+TGG - Chr6:6960044-6960063 None:intergenic 30.0%
! TATTCAAATATGGTGCTGAA+AGG - Chr6:6960686-6960705 None:intergenic 30.0%
! TCCATTCTAAATGATTTGTG+TGG + Chr6:6959509-6959528 MsG0680030671.01.T01:intron 30.0%
! TTTTAGCATATCTTATGCTC+TGG + Chr6:6959035-6959054 MsG0680030671.01.T01:intron 30.0%
!! AGAGTTTTGATCAAAGAACA+TGG + Chr6:6961668-6961687 MsG0680030671.01.T01:intron 30.0%
!! TCTTGCCATTCATTTTTAAG+TGG + Chr6:6962341-6962360 MsG0680030671.01.T01:intron 30.0%
!! TGAAAAACTTGTTGAGGAAT+GGG + Chr6:6962606-6962625 MsG0680030671.01.T01:CDS 30.0%
!! TTTGTGTTGTTATTTGTTGG+TGG + Chr6:6958803-6958822 MsG0680030671.01.T01:intron 30.0%
!!! CCGAGTTTTGGAATATTTTT+TGG + Chr6:6958728-6958747 MsG0680030671.01.T01:intron 30.0%
!!! CTTCTTTATTTTAGTTCGGA+AGG + Chr6:6960436-6960455 MsG0680030671.01.T01:intron 30.0%
AACATGCGACAAGAAAATAG+AGG - Chr6:6961409-6961428 None:intergenic 35.0%
AACTGAAGTTGTCAACATAG+CGG - Chr6:6959623-6959642 None:intergenic 35.0%
AATAATTTAATCCACCCCCA+TGG - Chr6:6960837-6960856 None:intergenic 35.0%
ACCAACGACTTAAACATTCA+AGG + Chr6:6959969-6959988 MsG0680030671.01.T01:CDS 35.0%
ACCTTGAATGTTTAAGTCGT+TGG - Chr6:6959973-6959992 None:intergenic 35.0%
AGAATGTATGAGAAATGTCC+TGG + Chr6:6962631-6962650 MsG0680030671.01.T01:CDS 35.0%
AGATAATTGGAATGTCAACG+AGG + Chr6:6960997-6961016 MsG0680030671.01.T01:intron 35.0%
AGTAATATTCTCAACACCAG+TGG - Chr6:6962135-6962154 None:intergenic 35.0%
AGTAATCACTCGGATAAACA+GGG - Chr6:6960806-6960825 None:intergenic 35.0%
ATGCCTTGAAAATTGCAACA+AGG - Chr6:6962300-6962319 None:intergenic 35.0%
ATGCTGTTATCTTTCTGTAC+CGG + Chr6:6959782-6959801 MsG0680030671.01.T01:CDS 35.0%
ATTACTACAATCAACCATGG+GGG + Chr6:6960820-6960839 MsG0680030671.01.T01:intron 35.0%
ATTGTTTGTGTAACTTCTGG+CGG + Chr6:6959567-6959586 MsG0680030671.01.T01:CDS 35.0%
ATTTCATGACTGTTGTGCAA+AGG - Chr6:6959395-6959414 None:intergenic 35.0%
CAAAAATGTTGTCAGTGCTT+AGG + Chr6:6961497-6961516 MsG0680030671.01.T01:CDS 35.0%
CAACGTAATTCTTCATCATC+AGG + Chr6:6959440-6959459 MsG0680030671.01.T01:CDS 35.0%
CAAGATAAAACATTGCACGT+GGG - Chr6:6961031-6961050 None:intergenic 35.0%
CACTTTATGATGTTCCTCAA+AGG + Chr6:6960207-6960226 MsG0680030671.01.T01:intron 35.0%
CAGCAAATTCAAGATAACTC+TGG - Chr6:6960401-6960420 None:intergenic 35.0%
CATATCTGTTGCATCAAACA+AGG - Chr6:6960747-6960766 None:intergenic 35.0%
CTCCTTAATTGAATACCTGT+CGG - Chr6:6961894-6961913 None:intergenic 35.0%
CTTGCAACCAGTTTAAACTT+AGG - Chr6:6962715-6962734 None:intergenic 35.0%
CTTGTTTGATGCAACAGATA+TGG + Chr6:6960745-6960764 MsG0680030671.01.T01:intron 35.0%
GAATGTATGAGAAATGTCCT+GGG + Chr6:6962632-6962651 MsG0680030671.01.T01:CDS 35.0%
GAGATTGATCAAGAAGAAGT+TGG + Chr6:6962748-6962767 MsG0680030671.01.T01:CDS 35.0%
GATTACTACAATCAACCATG+GGG + Chr6:6960819-6960838 MsG0680030671.01.T01:intron 35.0%
GCAATTCTTATCTATGTGTC+GGG - Chr6:6961978-6961997 None:intergenic 35.0%
GGTTGATTGTAGTAATCACT+CGG - Chr6:6960816-6960835 None:intergenic 35.0%
GTGATTACTACAATCAACCA+TGG + Chr6:6960817-6960836 MsG0680030671.01.T01:intron 35.0%
TAAGAATTGCTTTCCTCCTT+TGG + Chr6:6961988-6962007 MsG0680030671.01.T01:intron 35.0%
TAGTAATCACTCGGATAAAC+AGG - Chr6:6960807-6960826 None:intergenic 35.0%
TATAATGCAAAAAGCGACGA+AGG - Chr6:6958866-6958885 None:intergenic 35.0%
TATCTGACTACTATGTTCCT+TGG + Chr6:6961060-6961079 MsG0680030671.01.T01:intron 35.0%
TATGTTGACAACTTCAGTTC+AGG + Chr6:6959624-6959643 MsG0680030671.01.T01:CDS 35.0%
TCCCCTGCATAAATATTCAT+TGG - Chr6:6959889-6959908 None:intergenic 35.0%
TGAATGTTTAAGTCGTTGGT+GGG - Chr6:6959969-6959988 None:intergenic 35.0%
TGAGAGTTCATTTGCAACAA+CGG - Chr6:6962087-6962106 None:intergenic 35.0%
TTAAACTGGTTGCAAGACTA+GGG + Chr6:6962719-6962738 MsG0680030671.01.T01:CDS 35.0%
TTAAAGAAAAGGCTAATCGC+AGG - Chr6:6959823-6959842 None:intergenic 35.0%
TTATCTTGAGAGTAACAGGT+CGG + Chr6:6959725-6959744 MsG0680030671.01.T01:intron 35.0%
TTCTCAAGTTACGACAGATT+GGG + Chr6:6958696-6958715 MsG0680030671.01.T01:intron 35.0%
TTGAATGTTTAAGTCGTTGG+TGG - Chr6:6959970-6959989 None:intergenic 35.0%
TTGCAAATGAACTCTCAACT+CGG + Chr6:6962090-6962109 MsG0680030671.01.T01:CDS 35.0%
TTGCAGATGTTGCAGATAAT+TGG + Chr6:6960984-6961003 MsG0680030671.01.T01:intron 35.0%
TTTAAACTGGTTGCAAGACT+AGG + Chr6:6962718-6962737 MsG0680030671.01.T01:CDS 35.0%
TTTATGGCGAATAAATGTGC+AGG + Chr6:6959282-6959301 MsG0680030671.01.T01:intron 35.0%
! AATGTGCAGGTAGATTTTGA+TGG + Chr6:6959295-6959314 MsG0680030671.01.T01:intron 35.0%
! CGAAGTAGTTATGTTTGTTG+GGG + Chr6:6958980-6958999 MsG0680030671.01.T01:intron 35.0%
! GAGACATGCCATTTATATTG+AGG + Chr6:6962220-6962239 MsG0680030671.01.T01:CDS 35.0%
! GTAGATTTTCCTGCACTAAT+TGG + Chr6:6960939-6960958 MsG0680030671.01.T01:intron 35.0%
! TCTCCTTGTTGCAATTTTCA+AGG + Chr6:6962294-6962313 MsG0680030671.01.T01:intron 35.0%
!! ATTATTGGTTCGGTGTAATG+AGG + Chr6:6958776-6958795 MsG0680030671.01.T01:intron 35.0%
!! CTGAAAAACTTGTTGAGGAA+TGG + Chr6:6962605-6962624 MsG0680030671.01.T01:CDS 35.0%
!! GACTAGTCTTTCATCAGATT+AGG - Chr6:6960281-6960300 None:intergenic 35.0%
!! TTTATGATGATGGTTGGACT+TGG + Chr6:6959257-6959276 MsG0680030671.01.T01:intron 35.0%
!!! CTAAGCACTGACAACATTTT+TGG - Chr6:6961499-6961518 None:intergenic 35.0%
!!! TTCGTCGCTTTTTGCATTAT+AGG + Chr6:6958865-6958884 MsG0680030671.01.T01:intron 35.0%
!!! TTTTTGGGACCTCAGAAAAT+GGG + Chr6:6959532-6959551 MsG0680030671.01.T01:intron 35.0%
AAAATAGCATTCCACACGAG+AGG + Chr6:6961842-6961861 MsG0680030671.01.T01:intron 40.0%
AAAGATACGCAGAATGCCAA+AGG - Chr6:6961535-6961554 None:intergenic 40.0%
AAATGAACTCTCAACTCGGA+AGG + Chr6:6962094-6962113 MsG0680030671.01.T01:CDS 40.0%
AACTTCAGTTCAGGTCATAG+AGG + Chr6:6959633-6959652 MsG0680030671.01.T01:CDS 40.0%
AAGGAGAAGAAACCAAAGGT+TGG - Chr6:6962281-6962300 None:intergenic 40.0%
AAGTTGGAACTGACCCAAAT+GGG + Chr6:6962764-6962783 MsG0680030671.01.T01:CDS 40.0%
ACCAATCGAAAGCCATGTAA+TGG - Chr6:6958914-6958933 None:intergenic 40.0%
ACCAGTTTAAACTTAGGAGG+TGG - Chr6:6962709-6962728 None:intergenic 40.0%
ACTTCAGTTCAGGTCATAGA+GGG + Chr6:6959634-6959653 MsG0680030671.01.T01:CDS 40.0%
ACTTTGCAGGTACTTTCTGA+AGG + Chr6:6959753-6959772 MsG0680030671.01.T01:intron 40.0%
AGGAGGAGCAGAATCAAAAA+AGG - Chr6:6959375-6959394 None:intergenic 40.0%
ATGGCTTGAGAATTGCACAA+TGG - Chr6:6958895-6958914 None:intergenic 40.0%
ATGTCCTGGGACTAAAAATG+TGG + Chr6:6962645-6962664 MsG0680030671.01.T01:CDS 40.0%
CAACAAGGAGAAGAAACCAA+AGG - Chr6:6962285-6962304 None:intergenic 40.0%
CAAGGCAAGTGTATCATACT+CGG - Chr6:6959670-6959689 None:intergenic 40.0%
CAATCTGTCGTAACTTGAGA+AGG - Chr6:6958697-6958716 None:intergenic 40.0%
CTATGTTCCTTGGAAGGATA+TGG + Chr6:6961070-6961089 MsG0680030671.01.T01:intron 40.0%
CTCCGACAGGTATTCAATTA+AGG + Chr6:6961889-6961908 MsG0680030671.01.T01:intron 40.0%
CTTAATTGAATACCTGTCGG+AGG - Chr6:6961891-6961910 None:intergenic 40.0%
CTTCTCAAGTTACGACAGAT+TGG + Chr6:6958695-6958714 MsG0680030671.01.T01:intron 40.0%
GAGAGGATCAAAATACCTCT+CGG + Chr6:6961859-6961878 MsG0680030671.01.T01:intron 40.0%
GATGGATGCTGAAAACAGAA+TGG + Chr6:6959313-6959332 MsG0680030671.01.T01:exon 40.0%
GCAACCAGTTTAAACTTAGG+AGG - Chr6:6962712-6962731 None:intergenic 40.0%
GCAAGATAAAACATTGCACG+TGG - Chr6:6961032-6961051 None:intergenic 40.0%
GCAATTCTCAAGCCATTACA+TGG + Chr6:6958899-6958918 MsG0680030671.01.T01:intron 40.0%
GGAGAATGTCATAGTTACAG+AGG - Chr6:6959012-6959031 None:intergenic 40.0%
GGCTTACAGTTTACAATCGT+AGG - Chr6:6960726-6960745 None:intergenic 40.0%
GTCAGTGCTTAGGAAAGATT+GGG + Chr6:6961507-6961526 MsG0680030671.01.T01:CDS 40.0%
GTGGAATGAAAACCACAATG+AGG - Chr6:6960628-6960647 None:intergenic 40.0%
TGACTACTATGTTCCTTGGA+AGG + Chr6:6961064-6961083 MsG0680030671.01.T01:intron 40.0%
TGCAACATCTGCAAAACAGA+AGG - Chr6:6960978-6960997 None:intergenic 40.0%
TGTCAGTGCTTAGGAAAGAT+TGG + Chr6:6961506-6961525 MsG0680030671.01.T01:CDS 40.0%
TGTGTCGGGATATATTACTC+AGG - Chr6:6961964-6961983 None:intergenic 40.0%
TTGTCGCATGTTAATCTTGC+AGG + Chr6:6961417-6961436 MsG0680030671.01.T01:intron 40.0%
! AAAAATGTGGCTGGTAGTGT+AGG + Chr6:6962658-6962677 MsG0680030671.01.T01:CDS 40.0%
! AGTTAAGTAATTTTCCCCCG+TGG + Chr6:6959172-6959191 MsG0680030671.01.T01:intron 40.0%
! GGCATTCTGCGTATCTTTTA+AGG + Chr6:6961537-6961556 MsG0680030671.01.T01:CDS 40.0%
! TAACTTGTGCTTCAAGGGTT+TGG - Chr6:6959349-6959368 None:intergenic 40.0%
!! AACTTAGGAGGTGGCTTTAA+TGG - Chr6:6962700-6962719 None:intergenic 40.0%
!! ACTTAGGAGGTGGCTTTAAT+GGG - Chr6:6962699-6962718 None:intergenic 40.0%
!! AGGCTTTAACTTGTGCTTCA+AGG - Chr6:6959355-6959374 None:intergenic 40.0%
!! ATGGTTGGACTTGGTGTTTA+TGG + Chr6:6959266-6959285 MsG0680030671.01.T01:intron 40.0%
!! CACATATTGGTTAGCCTTTG+AGG - Chr6:6960224-6960243 None:intergenic 40.0%
!! GGCTTTAACTTGTGCTTCAA+GGG - Chr6:6959354-6959373 None:intergenic 40.0%
!!! GTTTTTGGGACCTCAGAAAA+TGG + Chr6:6959531-6959550 MsG0680030671.01.T01:intron 40.0%
!!! TTTTGGGACCTCAGAAAATG+GGG + Chr6:6959533-6959552 MsG0680030671.01.T01:intron 40.0%
AAGTAAGGGATCCTCAGGAA+GGG - Chr6:6959934-6959953 None:intergenic 45.0%
AGGATCAAAATACCTCTCGG+TGG + Chr6:6961862-6961881 MsG0680030671.01.T01:intron 45.0%
ATATCCAGGTCCTAAGTCCA+CGG - Chr6:6959192-6959211 None:intergenic 45.0%
ATGCCGAATTACGTCCAACA+TGG + Chr6:6962520-6962539 MsG0680030671.01.T01:CDS 45.0%
CAGGACCAGAAATTTACCTC+CGG - Chr6:6959804-6959823 None:intergenic 45.0%
CATTCAAGTAAGGGATCCTC+AGG - Chr6:6959939-6959958 None:intergenic 45.0%
CTGTACCGGAGGTAAATTTC+TGG + Chr6:6959796-6959815 MsG0680030671.01.T01:intron 45.0%
CTGTTATCTTTCTGTACCGG+AGG + Chr6:6959785-6959804 MsG0680030671.01.T01:CDS 45.0%
CTTCAGTTCAGGTCATAGAG+GGG + Chr6:6959635-6959654 MsG0680030671.01.T01:CDS 45.0%
GAACAAGCTTTACGTCCAAG+AGG - Chr6:6961471-6961490 None:intergenic 45.0%
GAAGTTGGAACTGACCCAAA+TGG + Chr6:6962763-6962782 MsG0680030671.01.T01:CDS 45.0%
GATTCCAGTAGGTGACTCTA+TGG + Chr6:6962242-6962261 MsG0680030671.01.T01:intron 45.0%
GCCACCTCCTAAGTTTAAAC+TGG + Chr6:6962705-6962724 MsG0680030671.01.T01:CDS 45.0%
GCCATTACATGGCTTTCGAT+TGG + Chr6:6958910-6958929 MsG0680030671.01.T01:intron 45.0%
GGAATGTCAACGAGGTGAAT+TGG + Chr6:6961005-6961024 MsG0680030671.01.T01:intron 45.0%
GTGGAGCACAAAATTCAGTC+AGG + Chr6:6961439-6961458 MsG0680030671.01.T01:CDS 45.0%
TAGGAAAGATTGGGCTCCTT+TGG + Chr6:6961516-6961535 MsG0680030671.01.T01:CDS 45.0%
TCATGACTGTTGTGCAAAGG+AGG - Chr6:6959392-6959411 None:intergenic 45.0%
TCGCATGTTAATCTTGCAGG+TGG + Chr6:6961420-6961439 MsG0680030671.01.T01:intron 45.0%
! GGCTCGAAGCATTCAAGTAA+GGG - Chr6:6959948-6959967 None:intergenic 45.0%
! GGGACTATTTTCCCGAGTTT+TGG + Chr6:6958716-6958735 MsG0680030671.01.T01:intron 45.0%
! GTGACTCTATGGACTGACTT+TGG + Chr6:6962253-6962272 MsG0680030671.01.T01:intron 45.0%
! TAATTTTCCCCCGTGGACTT+AGG + Chr6:6959179-6959198 MsG0680030671.01.T01:intron 45.0%
! TGTATCATACTCGGTGGATG+TGG - Chr6:6959661-6959680 None:intergenic 45.0%
! TGTGGTTTTCATTCCACTGC+AGG + Chr6:6960631-6960650 MsG0680030671.01.T01:intron 45.0%
! TTTCCTCCTTTGGTGACAGT+TGG + Chr6:6961998-6962017 MsG0680030671.01.T01:intron 45.0%
!! GGCTGCTGAAAAACTTGTTG+AGG + Chr6:6962600-6962619 MsG0680030671.01.T01:CDS 45.0%
!! TAGCACTGACCAATTAGTGC+AGG - Chr6:6960951-6960970 None:intergenic 45.0%
!!! GGTATTTTGATCCTCTCGTG+TGG - Chr6:6961856-6961875 None:intergenic 45.0%
!! AAAAATATTAAATACAATAT+AGG - Chr6:6960783-6960802 None:intergenic 5.0%
!! AAATATAAATAGAAATAAAA+AGG - Chr6:6960367-6960386 None:intergenic 5.0%
!! AATATAAATAGAAATAAAAA+GGG - Chr6:6960366-6960385 None:intergenic 5.0%
ACTACAATCAACCATGGGGG+TGG + Chr6:6960823-6960842 MsG0680030671.01.T01:intron 50.0%
AGGACCTGGATATATCACCG+TGG + Chr6:6959199-6959218 MsG0680030671.01.T01:intron 50.0%
AGTAAGGGATCCTCAGGAAG+GGG - Chr6:6959933-6959952 None:intergenic 50.0%
ATGGCGGCCTTAGATCCTAT+GGG + Chr6:6962539-6962558 MsG0680030671.01.T01:CDS 50.0%
CAAGTAAGGGATCCTCAGGA+AGG - Chr6:6959935-6959954 None:intergenic 50.0%
CAGTCCATAGAGTCACCTAC+TGG - Chr6:6962249-6962268 None:intergenic 50.0%
CATCCACCCCATAGGATCTA+AGG - Chr6:6962549-6962568 None:intergenic 50.0%
CCGAATTACGTCCAACATGG+CGG + Chr6:6962523-6962542 MsG0680030671.01.T01:CDS 50.0%
CCGCCATGTTGGACGTAATT+CGG - Chr6:6962526-6962545 None:intergenic 50.0%
CCTCAGAAAATGGGGAAGCT+AGG + Chr6:6959541-6959560 MsG0680030671.01.T01:intron 50.0%
CCTGGGACTAAAAATGTGGC+TGG + Chr6:6962649-6962668 MsG0680030671.01.T01:CDS 50.0%
CTGTCTCCAACTGTCACCAA+AGG - Chr6:6962007-6962026 None:intergenic 50.0%
GGACCTGGATATATCACCGT+GGG + Chr6:6959200-6959219 MsG0680030671.01.T01:intron 50.0%
GGCAAGTGTATCATACTCGG+TGG - Chr6:6959667-6959686 None:intergenic 50.0%
GGTACAGTGTGACGAGTCAA+GGG + Chr6:6959221-6959240 MsG0680030671.01.T01:intron 50.0%
GTACAGTGTGACGAGTCAAG+GGG + Chr6:6959222-6959241 MsG0680030671.01.T01:intron 50.0%
GTACCCACGGTGATATATCC+AGG - Chr6:6959206-6959225 None:intergenic 50.0%
TACAGTGTGACGAGTCAAGG+GGG + Chr6:6959223-6959242 MsG0680030671.01.T01:intron 50.0%
TAGATCCTATGGGGTGGATG+CGG + Chr6:6962549-6962568 MsG0680030671.01.T01:CDS 50.0%
TATCCAGGTCCTAAGTCCAC+GGG - Chr6:6959191-6959210 None:intergenic 50.0%
TCAGGAAGGGGTCTGCAAAA+TGG - Chr6:6959921-6959940 None:intergenic 50.0%
TCAGTCAGGAACTCACCTCT+TGG + Chr6:6961453-6961472 MsG0680030671.01.T01:CDS 50.0%
TCTCCAACTGTCACCAAAGG+AGG - Chr6:6962004-6962023 None:intergenic 50.0%
TCTTGAGAGTAACAGGTCGG+TGG + Chr6:6959728-6959747 MsG0680030671.01.T01:intron 50.0%
! ATTTTGCAGACCCCTTCCTG+AGG + Chr6:6959920-6959939 MsG0680030671.01.T01:CDS 50.0%
! CCTAGCTTCCCCATTTTCTG+AGG - Chr6:6959544-6959563 None:intergenic 50.0%
! CTGACTTTGGCTCCAACCTT+TGG + Chr6:6962266-6962285 MsG0680030671.01.T01:intron 50.0%
! GGGCTCGAAGCATTCAAGTA+AGG - Chr6:6959949-6959968 None:intergenic 50.0%
! TGCAGGTACTTTCTGAAGGC+TGG + Chr6:6959757-6959776 MsG0680030671.01.T01:intron 50.0%
!! AGCAGTGAAGAGTGCTATCG+TGG + Chr6:6960469-6960488 MsG0680030671.01.T01:CDS 50.0%
!! GCGGAGCTTGCTAACAAAAC+AGG + Chr6:6962568-6962587 MsG0680030671.01.T01:CDS 50.0%
!!! CCAGCCACATTTTTAGTCCC+AGG - Chr6:6962652-6962671 None:intergenic 50.0%
AACTCGGAAGGAGCAAGTGG+TGG + Chr6:6962106-6962125 MsG0680030671.01.T01:CDS 55.0%
ATCCAGGTCCTAAGTCCACG+GGG - Chr6:6959190-6959209 None:intergenic 55.0%
ATTCCACTGCAGGCAGTAGC+AGG + Chr6:6960641-6960660 MsG0680030671.01.T01:intron 55.0%
CATGGCGGCCTTAGATCCTA+TGG + Chr6:6962538-6962557 MsG0680030671.01.T01:CDS 55.0%
CCACTGCTCCATTGGAGCAA+CGG + Chr6:6959592-6959611 MsG0680030671.01.T01:CDS 55.0%
CTCAACTCGGAAGGAGCAAG+TGG + Chr6:6962103-6962122 MsG0680030671.01.T01:CDS 55.0%
GAAGGGGTCTGCAAAATGGC+TGG - Chr6:6959917-6959936 None:intergenic 55.0%
GACTCGTCACACTGTACCCA+CGG - Chr6:6959219-6959238 None:intergenic 55.0%
GGGTACAGTGTGACGAGTCA+AGG + Chr6:6959220-6959239 MsG0680030671.01.T01:intron 55.0%
TGGCGGCCTTAGATCCTATG+GGG + Chr6:6962540-6962559 MsG0680030671.01.T01:CDS 55.0%
! AGGATCTAAGGCCGCCATGT+TGG - Chr6:6962537-6962556 None:intergenic 55.0%
! CAGGTCGGTGGTTACTTTGC+AGG + Chr6:6959740-6959759 MsG0680030671.01.T01:intron 55.0%
AAGCTCCGCATCCACCCCAT+AGG - Chr6:6962557-6962576 None:intergenic 60.0%
CCGTTGCTCCAATGGAGCAG+TGG - Chr6:6959595-6959614 None:intergenic 60.0%
CGGCCTTAGATCCTATGGGG+TGG + Chr6:6962543-6962562 MsG0680030671.01.T01:CDS 60.0%
GAGCAAGTGGTGGTCACCAC+TGG + Chr6:6962116-6962135 MsG0680030671.01.T01:CDS 60.0%
TCCAGGTCCTAAGTCCACGG+GGG - Chr6:6959189-6959208 None:intergenic 60.0%
TGGCGGTACCACTGCTCCAT+TGG + Chr6:6959584-6959603 MsG0680030671.01.T01:CDS 60.0%
CCACTGCAGGCAGTAGCAGG+CGG + Chr6:6960644-6960663 MsG0680030671.01.T01:intron 65.0%
CGGACGCACCGTTGCTCCAA+TGG - Chr6:6959603-6959622 None:intergenic 65.0%
TCCCCCGTGGACTTAGGACC+TGG + Chr6:6959185-6959204 MsG0680030671.01.T01:intron 65.0%
TCTCGGTGGTGACCTCCGAC+AGG + Chr6:6961876-6961895 MsG0680030671.01.T01:intron 65.0%
TGTCGGAGGTCACCACCGAG+AGG - Chr6:6961877-6961896 None:intergenic 65.0%
CCGCCTGCTACTGCCTGCAG+TGG - Chr6:6960647-6960666 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 6958375 6962792 6958375 ID=MsG0680030671.01;Name=MsG0680030671.01
Chr6 mRNA 6958375 6962792 6958375 ID=MsG0680030671.01.T01;Parent=MsG0680030671.01;Name=MsG0680030671.01.T01;_AED=0.36;_eAED=0.36;_QI=230|0.77|0.8|1|0.88|0.8|10|0|388
Chr6 exon 6958375 6958594 6958375 ID=MsG0680030671.01.T01:exon:6521;Parent=MsG0680030671.01.T01
Chr6 exon 6959304 6959461 6959304 ID=MsG0680030671.01.T01:exon:6522;Parent=MsG0680030671.01.T01
Chr6 exon 6959547 6959670 6959547 ID=MsG0680030671.01.T01:exon:6523;Parent=MsG0680030671.01.T01
Chr6 exon 6959762 6959806 6959762 ID=MsG0680030671.01.T01:exon:6524;Parent=MsG0680030671.01.T01
Chr6 exon 6959905 6959990 6959905 ID=MsG0680030671.01.T01:exon:6525;Parent=MsG0680030671.01.T01
Chr6 exon 6960450 6960502 6960450 ID=MsG0680030671.01.T01:exon:6526;Parent=MsG0680030671.01.T01
Chr6 exon 6960653 6960712 6960653 ID=MsG0680030671.01.T01:exon:6527;Parent=MsG0680030671.01.T01
Chr6 exon 6961439 6961558 6961439 ID=MsG0680030671.01.T01:exon:6528;Parent=MsG0680030671.01.T01
Chr6 exon 6962017 6962252 6962017 ID=MsG0680030671.01.T01:exon:6529;Parent=MsG0680030671.01.T01
Chr6 exon 6962498 6962792 6962498 ID=MsG0680030671.01.T01:exon:6530;Parent=MsG0680030671.01.T01
Chr6 five_prime_UTR 6958375 6958594 6958375 ID=MsG0680030671.01.T01:five_prime_utr;Parent=MsG0680030671.01.T01
Chr6 five_prime_UTR 6959304 6959313 6959304 ID=MsG0680030671.01.T01:five_prime_utr;Parent=MsG0680030671.01.T01
Chr6 CDS 6959314 6959461 6959314 ID=MsG0680030671.01.T01:cds;Parent=MsG0680030671.01.T01
Chr6 CDS 6959547 6959670 6959547 ID=MsG0680030671.01.T01:cds;Parent=MsG0680030671.01.T01
Chr6 CDS 6959762 6959806 6959762 ID=MsG0680030671.01.T01:cds;Parent=MsG0680030671.01.T01
Chr6 CDS 6959905 6959990 6959905 ID=MsG0680030671.01.T01:cds;Parent=MsG0680030671.01.T01
Chr6 CDS 6960450 6960502 6960450 ID=MsG0680030671.01.T01:cds;Parent=MsG0680030671.01.T01
Chr6 CDS 6960653 6960712 6960653 ID=MsG0680030671.01.T01:cds;Parent=MsG0680030671.01.T01
Chr6 CDS 6961439 6961558 6961439 ID=MsG0680030671.01.T01:cds;Parent=MsG0680030671.01.T01
Chr6 CDS 6962017 6962252 6962017 ID=MsG0680030671.01.T01:cds;Parent=MsG0680030671.01.T01
Chr6 CDS 6962498 6962792 6962498 ID=MsG0680030671.01.T01:cds;Parent=MsG0680030671.01.T01
Gene Sequence

>MsG0680030671.01.T01

ATGGATGCTGAAAACAGAATGGAAGATATGGGCCAAACCCTTGAAGCACAAGTTAAAGCCTTTTTTGATTCTGCTCCTCCTTTGCACAACAGTCATGAAATAACTCAAGAATTGAATCAATTCATTCAACGTAATTCTTCATCATCAGAAAATGGGGAAGCTAGGAGAATTGTTTGTGTAACTTCTGGCGGTACCACTGCTCCATTGGAGCAACGGTGCGTCCGCTATGTTGACAACTTCAGTTCAGGTCATAGAGGGGCCACATCCACCGAGTACTTTCTGAAGGCTGGATATGCTGTTATCTTTCTGTACCGGAGGGGAAGTTTCCAGCCATTTTGCAGACCCCTTCCTGAGGATCCCTTACTTGAATGCTTCGAGCCCACCAACGACTTAAACATTCAAGTTCGGAAGGATTATTCTGAAGCAGTGAAGAGTGCTATCGTGGAATATCATACTGCAGTAGCAGGCGGTCACTTGTTAAAACTTCCTTTCAGCACCATATTTGAATATCTTCAGGTGGAGCACAAAATTCAGTCAGGAACTCACCTCTTGGACGTAAAGCTTGTTCAAGTGCCAAAAATGTTGTCAGTGCTTAGGAAAGATTGGGCTCCTTTGGCATTCTGCGTATCTTTTAAGTTGGAGACAGATTCAAGCATTCTTCTAAATAAGGCTAATGCAGCTCTTGAAAAGTACAGCATGCATGCCGTTGTTGCAAATGAACTCTCAACTCGGAAGGAGCAAGTGGTGGTCACCACTGGTGTTGAGAATATTACTGTTCGGCGAGACAATAGTGAGTCTGCTAATGATGTCGAAAAACCCTTGATTAAACTTCTTTCAGAGAGACATGCCATTTATATTGAGGATTCCAGTAGAAGGAAAGAGTTCGTCAAAATCATGCCGAATTACGTCCAACATGGCGGCCTTAGATCCTATGGGGTGGATGCGGAGCTTGCTAACAAAACAGGAAGCAATTTGGCTGCTGAAAAACTTGTTGAGGAATGGGAGAGAATGTATGAGAAATGTCCTGGGACTAAAAATGTGGCTGGTAGTGTAGGAATCATTGTGAGAGACCCATTAAAGCCACCTCCTAAGTTTAAACTGGTTGCAAGACTAGGGAAGCTAGAGATTGATCAAGAAGAAGTTGGAACTGACCCAAATGGGACATAA
Protein sequence

>MsG0680030671.01.T01

MDAENRMEDMGQTLEAQVKAFFDSAPPLHNSHEITQELNQFIQRNSSSSENGEARRIVCVTSGGTTAPLEQRCVRYVDNFSSGHRGATSTEYFLKAGYAVIFLYRRGSFQPFCRPLPEDPLLECFEPTNDLNIQVRKDYSEAVKSAIVEYHTAVAGGHLLKLPFSTIFEYLQVEHKIQSGTHLLDVKLVQVPKMLSVLRKDWAPLAFCVSFKLETDSSILLNKANAALEKYSMHAVVANELSTRKEQVVVTTGVENITVRRDNSESANDVEKPLIKLLSERHAIYIEDSSRRKEFVKIMPNYVQHGGLRSYGVDAELANKTGSNLAAEKLVEEWERMYEKCPGTKNVAGSVGIIVRDPLKPPPKFKLVARLGKLEIDQEEVGTDPNGT*