AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046594.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046594.01.T01 MTR_4g112080 94.488 254 11 1 7 257 43 296 2.34e-180 505
MsG0880046594.01.T01 MTR_3g073550 85.830 247 32 1 14 257 50 296 1.49e-155 442
MsG0880046594.01.T01 MTR_4g112080 94.030 201 9 1 7 204 43 243 2.79e-141 404
MsG0880046594.01.T01 MTR_4g111720 71.292 209 6 2 258 427 129 322 5.35e-89 273
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046594.01.T01 AT5G02080 65.000 260 87 2 4 260 29 287 6.61e-116 341
MsG0880046594.01.T01 AT5G02080 64.179 268 84 4 4 260 29 295 4.04e-114 337
MsG0880046594.01.T01 AT1G12350 64.341 258 89 1 4 258 36 293 7.75e-114 336
MsG0880046594.01.T01 AT1G12350 64.341 258 89 1 4 258 36 293 7.75e-114 336
MsG0880046594.01.T01 AT5G02080 62.308 260 72 4 4 260 12 248 8.88e-106 314
MsG0880046594.01.T01 AT5G02080 57.692 260 77 3 4 260 29 258 4.14e-93 282
MsG0880046594.01.T01 AT5G02080 57.711 201 51 3 7 204 33 202 5.55e-73 229
MsG0880046594.01.T01 AT5G02080 63.190 163 57 1 101 260 32 194 1.44e-62 201
MsG0880046594.01.T01 AT5G02080 64.238 151 51 1 113 260 45 195 1.24e-57 189
MsG0880046594.01.T01 AT1G74070 51.923 208 48 4 257 427 121 313 1.90e-55 186
MsG0880046594.01.T01 AT1G74070 49.682 157 42 3 259 378 123 279 1.48e-35 132

Find 108 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAGCATTCTTCTAAATA+AGG 0.236192 8:-75273496 MsG0880046594.01.T01:CDS
TATTTATATTGTTATATAAC+AGG 0.246756 8:-75270350 MsG0880046594.01.T01:CDS
GTAATGACAACTTTGGAATA+AGG 0.264096 8:+75270270 None:intergenic
TTGCAGATGTTGCAGATAAT+TGG 0.300606 8:-75274549 MsG0880046594.01.T01:intron
GATGCTTCGTCTCTGGTAAT+TGG 0.300640 8:-75270598 MsG0880046594.01.T01:CDS
AAATACAATGATTAATAAAC+AGG 0.304975 8:+75270368 None:intergenic
GTGTTATACTCACCTAAATA+TGG 0.335337 8:+75270502 None:intergenic
TAACAAAACAGGAAGCAATT+TGG 0.338744 8:-75270846 MsG0880046594.01.T01:CDS
CTATGTTCCTTGGAAGGATA+TGG 0.340074 8:-75274463 MsG0880046594.01.T01:intron
TAATGACAACTTTGGAATAA+GGG 0.342912 8:+75270271 None:intergenic
AACACGAGCTCTCCATATTT+AGG 0.357135 8:-75270514 MsG0880046594.01.T01:intron
AACAGGGTGGCGAAGCTTAT+AGG 0.358689 8:-75270333 MsG0880046594.01.T01:CDS
CACCATATTTGAATATCTTC+AGG 0.360802 8:-75274842 MsG0880046594.01.T01:intron
AGAATTGTTTGTGTAACTTC+TGG 0.363349 8:-75275970 MsG0880046594.01.T01:CDS
CATCCACCCCATAGGATCTA+AGG 0.376647 8:+75270879 None:intergenic
AACCTGAAGATATTCAAATA+TGG 0.376953 8:+75274840 None:intergenic
CCGCCATGTTGGACGTAATT+CGG 0.383851 8:+75270902 None:intergenic
GGCATTCTGCGTATCTTTCA+AGG 0.388750 8:-75273985 MsG0880046594.01.T01:intron
CATGGCGGCCTTAGATCCTA+TGG 0.389798 8:-75270887 MsG0880046594.01.T01:CDS
GAAGTTGGAACCGATCCTAA+TGG 0.394106 8:-75270661 MsG0880046594.01.T01:CDS
TGCAGGTACTTTCTGAAGGC+TGG 0.394312 8:-75275775 MsG0880046594.01.T01:intron
TATGTTGACAACTTCAGTTC+AGG 0.409846 8:-75275910 MsG0880046594.01.T01:CDS
TAGGAAAGATTGGGCTCCTC+TGG 0.410901 8:-75274006 MsG0880046594.01.T01:CDS
TGTCAGTGCTTAGGAAAGAT+TGG 0.417143 8:-75274016 MsG0880046594.01.T01:CDS
ATGACAAATTCTGTCCCATT+AGG 0.423603 8:+75270646 None:intergenic
ACCTTGAATGTTTAAGTCGT+TGG 0.428741 8:+75275562 None:intergenic
TCAGGAAGGGATCTGCAAAA+TGG 0.434348 8:+75275614 None:intergenic
ACAGTTTGTAATGACAACTT+TGG 0.444850 8:+75270263 None:intergenic
GGAACTAGATGCTTCGTCTC+TGG 0.450535 8:-75270605 MsG0880046594.01.T01:CDS
TGGCGGTACCACTGCTCCAT+TGG 0.451773 8:-75275950 MsG0880046594.01.T01:CDS
CGGACGCACCGTTGCTCCAA+TGG 0.458558 8:+75275934 None:intergenic
GTCAGTGCTTAGGAAAGATT+GGG 0.461847 8:-75274015 MsG0880046594.01.T01:CDS
ACCAACGACTTAAACATTCA+AGG 0.462743 8:-75275563 MsG0880046594.01.T01:intron
TGGAAGGGTGGTAGGAGGAA+TGG 0.470072 8:-75270578 MsG0880046594.01.T01:CDS
GGAATGTCAACGAGGTGTAT+TGG 0.483152 8:-75274528 MsG0880046594.01.T01:CDS
AAGTTGGAACCGATCCTAAT+GGG 0.484967 8:-75270660 MsG0880046594.01.T01:CDS
GAGCAAGTGGTGGTCACCAC+TGG 0.485051 8:-75273408 MsG0880046594.01.T01:CDS
GCAGAGCTAGCTAACAAAAC+AGG 0.486247 8:-75270857 MsG0880046594.01.T01:CDS
CTGGTAATTGGAAGGGTGGT+AGG 0.487495 8:-75270586 MsG0880046594.01.T01:CDS
TCAGTCAGGAACTCACCTCT+TGG 0.488080 8:-75274069 MsG0880046594.01.T01:CDS
GGGCTCGAAGCATTCAAGTA+AGG 0.489965 8:+75275586 None:intergenic
GAGATTGATCAAGAAGAAGT+TGG 0.490490 8:-75270676 MsG0880046594.01.T01:CDS
AGGGCTGTTGTTGCAGAAAG+AGG 0.493060 8:-75270303 MsG0880046594.01.T01:CDS
CATTCAAGTAAGGGATCCTC+AGG 0.498718 8:+75275596 None:intergenic
TTCATCATACTCGGTGGATG+TGG 0.504849 8:+75275876 None:intergenic
GAAGGGATCTGCAAAATGGC+TGG 0.504933 8:+75275618 None:intergenic
AAGATTGTCAGTGGAGCTGC+TGG 0.505949 8:-75270962 MsG0880046594.01.T01:CDS
TATCTGACTACTATGTTCCT+TGG 0.507667 8:-75274473 MsG0880046594.01.T01:CDS
CTGTTATCTTTCTGTACCGT+AGG 0.511334 8:-75275747 MsG0880046594.01.T01:intron
AGGATCTAAGGCCGCCATGT+TGG 0.511340 8:+75270891 None:intergenic
CTTCGTCTCTGGTAATTGGA+AGG 0.515812 8:-75270594 MsG0880046594.01.T01:CDS
TTGAATGTTTAAGTCGTTGG+TGG 0.522161 8:+75275565 None:intergenic
AACTTCAGTTCAGGTCATAG+AGG 0.523963 8:-75275901 MsG0880046594.01.T01:CDS
ATTCCACTGCAGGCAGTAGC+AGG 0.525265 8:-75274892 MsG0880046594.01.T01:intron
CCTCAGAAAATGGGGAAGCT+AGG 0.526578 8:-75275993 MsG0880046594.01.T01:CDS
ATTTATATTGTTATATAACA+GGG 0.529044 8:-75270349 MsG0880046594.01.T01:CDS
GGTTGTACAGAAGATTAGTC+AGG 0.532433 8:-75270554 MsG0880046594.01.T01:CDS
CATTGCAACAAAGGATTCGC+CGG 0.533779 8:-75270626 MsG0880046594.01.T01:CDS
AGAATTTGTCATTGCAACAA+AGG 0.539538 8:-75270635 MsG0880046594.01.T01:CDS
TGAATGTTTAAGTCGTTGGT+GGG 0.540259 8:+75275566 None:intergenic
GTGGAGCACAAAATTCAGTC+AGG 0.541342 8:-75274083 MsG0880046594.01.T01:CDS
ATGGCGGCCTTAGATCCTAT+GGG 0.543875 8:-75270886 MsG0880046594.01.T01:CDS
AGGTTTAGCAAGATTGTCAG+TGG 0.558164 8:-75270971 MsG0880046594.01.T01:CDS
GGCTCGAAGCATTCAAGTAA+GGG 0.559187 8:+75275587 None:intergenic
TGAGAGTTCATTTGCAACAA+CGG 0.559415 8:+75273440 None:intergenic
AGAGACGAAGCATCTAGTTC+CGG 0.559488 8:+75270607 None:intergenic
GTGTTGAGAAGATTACTGTT+CGG 0.572171 8:-75273386 MsG0880046594.01.T01:CDS
CCACTGCTCCATTGGAGCAA+CGG 0.572277 8:-75275942 MsG0880046594.01.T01:CDS
GTAATTGGAAGGGTGGTAGG+AGG 0.574187 8:-75270583 MsG0880046594.01.T01:CDS
ACTTCAGTTCAGGTCATAGA+GGG 0.576075 8:-75275900 MsG0880046594.01.T01:CDS
TGACTACTATGTTCCTTGGA+AGG 0.580511 8:-75274469 MsG0880046594.01.T01:CDS
TCCATTCTAAATGATTTGTG+TGG 0.583826 8:-75276025 None:intergenic
GATGTCCCTGCAGGAGTGAG+AGG 0.585167 8:-75270991 MsG0880046594.01.T01:intron
TAGCTCTGCATCCACCCCAT+AGG 0.585390 8:+75270871 None:intergenic
AAATTCTGTCCCATTAGGAT+CGG 0.586133 8:+75270651 None:intergenic
CAAGTAAGGGATCCTCAGGA+AGG 0.589721 8:+75275600 None:intergenic
TATTCAAATATGGTGCTGAA+AGG 0.593188 8:+75274850 None:intergenic
TTCGTCTCTGGTAATTGGAA+GGG 0.597402 8:-75270593 MsG0880046594.01.T01:CDS
AAAGTTGTCATTACAAACTG+TGG 0.597691 8:-75270261 MsG0880046594.01.T01:CDS
ATATATACCATATCCTTCCA+AGG 0.601376 8:+75274456 None:intergenic
CTCAACTCGGAAGGAGCAAG+TGG 0.603395 8:-75273421 MsG0880046594.01.T01:CDS
GCAAGATAAAACATTGCACG+TGG 0.604308 8:+75274504 None:intergenic
AAATGAACTCTCAACTCGGA+AGG 0.607353 8:-75273430 MsG0880046594.01.T01:CDS
ATTGTTTGTGTAACTTCTGG+CGG 0.615222 8:-75275967 MsG0880046594.01.T01:CDS
CGGCCTTAGATCCTATGGGG+TGG 0.615240 8:-75270882 MsG0880046594.01.T01:CDS
AGCAGTGAAGAGTGCTATCG+TGG 0.617711 8:-75275064 MsG0880046594.01.T01:CDS
GTCTCTGGTAATTGGAAGGG+TGG 0.619303 8:-75270590 MsG0880046594.01.T01:CDS
CGAAGCTTATAGGAGACAAG+AGG 0.623848 8:-75270323 MsG0880046594.01.T01:CDS
CTGCTGGTATAAGCTACAGA+AGG 0.626888 8:-75270946 MsG0880046594.01.T01:CDS
AACTCGGAAGGAGCAAGTGG+TGG 0.626926 8:-75273418 MsG0880046594.01.T01:CDS
AAGGGTGGTAGGAGGAATGG+AGG 0.630447 8:-75270575 MsG0880046594.01.T01:CDS
CCGTTGCTCCAATGGAGCAG+TGG 0.633468 8:+75275942 None:intergenic
ATGCCGAATTACGTCCAACA+TGG 0.635402 8:-75270905 MsG0880046594.01.T01:CDS
AAGTAAGGGATCCTCAGGAA+GGG 0.640605 8:+75275601 None:intergenic
TTGCAAATGAACTCTCAACT+CGG 0.647764 8:-75273434 MsG0880046594.01.T01:CDS
GAACAAGCTTTACGTCCAAG+AGG 0.657272 8:+75274054 None:intergenic
GAAGCTTATAGGAGACAAGA+GGG 0.659815 8:-75270322 MsG0880046594.01.T01:CDS
TATATTGTTATATAACAGGG+TGG 0.667359 8:-75270346 MsG0880046594.01.T01:CDS
AAAGATACGCAGAATGCCAG+AGG 0.667998 8:+75273990 None:intergenic
AATACAATGATTAATAAACA+GGG 0.672997 8:+75270369 None:intergenic
TGACAACTTTGGAATAAGGG+CGG 0.673460 8:+75270274 None:intergenic
CCGAATTACGTCCAACATGG+CGG 0.693184 8:-75270902 MsG0880046594.01.T01:CDS
TGGCGGCCTTAGATCCTATG+GGG 0.704631 8:-75270885 MsG0880046594.01.T01:CDS
AGTAATCTTCTCAACACCAG+TGG 0.714969 8:+75273392 None:intergenic
CTTCAGTTCAGGTCATAGAG+GGG 0.724824 8:-75275899 MsG0880046594.01.T01:CDS
AACTGAAGTTGTCAACATAG+CGG 0.729501 8:+75275914 None:intergenic
CAAGATAAAACATTGCACGT+GGG 0.733864 8:+75274505 None:intergenic
AGATAATTGGAATGTCAACG+AGG 0.783061 8:-75274536 MsG0880046594.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATATTTATATTAATT+TGG - Chr8:75273534-75273553 MsG0880046594.01.T01:intron 0.0%
!!! ATTTTTATTTAAAAATATAT+TGG + Chr8:75274387-75274406 None:intergenic 0.0%
!! AAAAATATTAAATACCATAT+AGG + Chr8:75271513-75271532 None:intergenic 10.0%
!! ATTTATATTGTTATATAACA+GGG - Chr8:75275914-75275933 MsG0880046594.01.T01:CDS 10.0%
!! TATTTATATTGTTATATAAC+AGG - Chr8:75275913-75275932 MsG0880046594.01.T01:CDS 10.0%
!!! AAATATTTATATTAATTTGG+TGG - Chr8:75273537-75273556 MsG0880046594.01.T01:intron 10.0%
!!! AATCTTTTAGATATTAAAAT+TGG - Chr8:75273399-75273418 MsG0880046594.01.T01:CDS 10.0%
!!! AGTATTAATTTTTGTAAATT+GGG + Chr8:75274259-75274278 None:intergenic 10.0%
!!! ATAAAAATTTCTTTTCTTAA+TGG - Chr8:75273214-75273233 MsG0880046594.01.T01:intron 10.0%
!! AAACAAAACTGAAAAATTAT+AGG + Chr8:75273592-75273611 None:intergenic 15.0%
!! AAATACAATGATTAATAAAC+AGG + Chr8:75275898-75275917 None:intergenic 15.0%
!! AATACAATGATTAATAAACA+GGG + Chr8:75275897-75275916 None:intergenic 15.0%
!! AATTTGTGATTATTATGTAT+GGG - Chr8:75273742-75273761 MsG0880046594.01.T01:intron 15.0%
!! TTTATGTAAGTTATAATTGT+AGG - Chr8:75271635-75271654 MsG0880046594.01.T01:intron 15.0%
!!! ATAGCAATAATATTTTGATA+CGG - Chr8:75272379-75272398 MsG0880046594.01.T01:intron 15.0%
!!! GAGTATTAATTTTTGTAAAT+TGG + Chr8:75274260-75274279 None:intergenic 15.0%
!! AAAATATATTGGATACCTTA+AGG + Chr8:75274376-75274395 None:intergenic 20.0%
!! AAATTAGTGTTTAGACAATA+TGG - Chr8:75271942-75271961 MsG0880046594.01.T01:intron 20.0%
!! AACAAATCAAACTAAAGAAA+AGG + Chr8:75270565-75270584 None:intergenic 20.0%
!! AATAACAATAGATAGAGTAA+AGG + Chr8:75274766-75274785 None:intergenic 20.0%
!! ACGTCAAAAATTTCAAATTT+AGG - Chr8:75273968-75273987 MsG0880046594.01.T01:intron 20.0%
!! AGTAGAATTGAAAATTTACT+TGG + Chr8:75270438-75270457 None:intergenic 20.0%
!! ATTGATACTTCAAATTAGTT+TGG - Chr8:75273315-75273334 MsG0880046594.01.T01:intron 20.0%
!! ATTTGTGATTATTATGTATG+GGG - Chr8:75273743-75273762 MsG0880046594.01.T01:intron 20.0%
!! CAATTTGTGATTATTATGTA+TGG - Chr8:75273741-75273760 MsG0880046594.01.T01:intron 20.0%
!! GCTAATGTTCAATTATATAA+AGG + Chr8:75271309-75271328 None:intergenic 20.0%
!! TGGCTAAAATGAATATTTAT+CGG - Chr8:75271860-75271879 MsG0880046594.01.T01:intron 20.0%
!! TGTTAATTTCTAAATATCCT+TGG + Chr8:75272544-75272563 None:intergenic 20.0%
!! TTAAACCACTTAAAAATGAA+TGG + Chr8:75273087-75273106 None:intergenic 20.0%
!! TTACAATTGTGTCAAAATAA+GGG - Chr8:75273135-75273154 MsG0880046594.01.T01:intron 20.0%
!! TTTACAATTGTGTCAAAATA+AGG - Chr8:75273134-75273153 MsG0880046594.01.T01:intron 20.0%
!!! AATTTTATGTACTCTATATG+TGG + Chr8:75274675-75274694 None:intergenic 20.0%
!!! ACAATAGTTTGTATGATTTT+AGG + Chr8:75270781-75270800 None:intergenic 20.0%
!!! ATTTTATGTACTCTATATGT+GGG + Chr8:75274674-75274693 None:intergenic 20.0%
!!! TAAAAGATTTTTATAACTCC+AGG + Chr8:75273388-75273407 None:intergenic 20.0%
!!! TATCTTTTTATTGTGTGAAA+CGG + Chr8:75270746-75270765 None:intergenic 20.0%
!!! TTTTTTTATTTTAGTTCGGA+AGG - Chr8:75271166-75271185 MsG0880046594.01.T01:intron 20.0%
! AACCTGAAGATATTCAAATA+TGG + Chr8:75271426-75271445 None:intergenic 25.0%
! AAGGAAAATATATCTGTACT+TGG + Chr8:75273854-75273873 None:intergenic 25.0%
! AATAATCAGCTACCTAAAAA+AGG - Chr8:75274808-75274827 MsG0880046594.01.T01:intron 25.0%
! ACATAGTACTAACTTTCTAA+AGG - Chr8:75272497-75272516 MsG0880046594.01.T01:intron 25.0%
! AGTTTATTCTTCTTTAAGTG+CGG + Chr8:75272472-75272491 None:intergenic 25.0%
! ATTTGTTCCCAATATCTAAA+GGG - Chr8:75274647-75274666 MsG0880046594.01.T01:intron 25.0%
! CACACAATAAAAAGATAAAG+AGG - Chr8:75270749-75270768 MsG0880046594.01.T01:intron 25.0%
! CATGAAATGAAATGTAAGAA+TGG - Chr8:75272033-75272052 MsG0880046594.01.T01:intron 25.0%
! GATTCTTAATTCCATAATCT+TGG - Chr8:75271840-75271859 MsG0880046594.01.T01:intron 25.0%
! GATTTATTAATAGAGTGTGA+AGG + Chr8:75273873-75273892 None:intergenic 25.0%
! GGTTTATTTCAAAAAGAACA+AGG + Chr8:75270417-75270436 None:intergenic 25.0%
! TAAAAATCTCTTCCAAATGA+CGG - Chr8:75273261-75273280 MsG0880046594.01.T01:intron 25.0%
! TAATTTCTAAATATCCTTGG+TGG + Chr8:75272541-75272560 None:intergenic 25.0%
! TACATCAAGTCAAAATACAA+TGG - Chr8:75274112-75274131 MsG0880046594.01.T01:intron 25.0%
! TACCAATGAATATTTATGCA+GGG - Chr8:75270615-75270634 MsG0880046594.01.T01:CDS 25.0%
! TATATTGTTATATAACAGGG+TGG - Chr8:75275917-75275936 MsG0880046594.01.T01:CDS 25.0%
! TCACACTCTATTAATAAATC+AGG - Chr8:75273873-75273892 MsG0880046594.01.T01:intron 25.0%
! TGAAGTCATTAATGTTTGTT+TGG + Chr8:75273723-75273742 None:intergenic 25.0%
! TGTATTTACACAAGAAACTA+AGG + Chr8:75271968-75271987 None:intergenic 25.0%
! TTAAAATTGGATTGTTCACA+AGG - Chr8:75273412-75273431 MsG0880046594.01.T01:CDS 25.0%
! TTACCAATGAATATTTATGC+AGG - Chr8:75270614-75270633 MsG0880046594.01.T01:CDS 25.0%
! TTCAAGCATTCTTCTAAATA+AGG - Chr8:75272767-75272786 MsG0880046594.01.T01:intron 25.0%
!! AATTTGTTCCCAATATCTAA+AGG - Chr8:75274646-75274665 MsG0880046594.01.T01:intron 25.0%
!! ATCTTTTTATTGTGTGAAAC+GGG + Chr8:75270745-75270764 None:intergenic 25.0%
!! GAAAGTATATAGACACATAT+TGG + Chr8:75270966-75270985 None:intergenic 25.0%
!! GGAAGAGATTTTTATAACTT+CGG + Chr8:75273255-75273274 None:intergenic 25.0%
!! GTTGTTTATATGGTATGTTT+TGG + Chr8:75274167-75274186 None:intergenic 25.0%
!! TTCAAATTTAGGATACGATA+CGG - Chr8:75273979-75273998 MsG0880046594.01.T01:intron 25.0%
!!! ACATGGGTACTTTTTTTTTA+AGG - Chr8:75273450-75273469 MsG0880046594.01.T01:CDS 25.0%
!!! ATTCATTTTAGCCAAGATTA+TGG + Chr8:75271854-75271873 None:intergenic 25.0%
!!! TAATGACAACTTTGGAATAA+GGG + Chr8:75275995-75276014 None:intergenic 25.0%
!!! TATGGTATGTTTTGGTTTAA+AGG + Chr8:75274159-75274178 None:intergenic 25.0%
!!! TTTTCAAGGCATTACAATTT+TGG - Chr8:75273046-75273065 MsG0880046594.01.T01:intron 25.0%
AAAGTTGTCATTACAAACTG+TGG - Chr8:75276002-75276021 MsG0880046594.01.T01:CDS 30.0%
AAATACTATGAAGCTCGATA+CGG - Chr8:75273907-75273926 MsG0880046594.01.T01:intron 30.0%
AATAATCACTCGGATAAACA+GGG + Chr8:75271536-75271555 None:intergenic 30.0%
ACAGTTTGTAATGACAACTT+TGG + Chr8:75276003-75276022 None:intergenic 30.0%
ACCAATGAATATTTATGCAG+GGG - Chr8:75270616-75270635 MsG0880046594.01.T01:CDS 30.0%
ACTGGAATCCTCAATATAAA+TGG + Chr8:75272969-75272988 None:intergenic 30.0%
ACTTAAAAATGAATGGCAAG+AGG + Chr8:75273080-75273099 None:intergenic 30.0%
AGAATTGTTTGTGTAACTTC+TGG - Chr8:75270293-75270312 MsG0880046594.01.T01:CDS 30.0%
AGAATTTGTCATTGCAACAA+AGG - Chr8:75275628-75275647 MsG0880046594.01.T01:CDS 30.0%
AGCAATTCTTATCTATGTGT+CGG + Chr8:75272718-75272737 None:intergenic 30.0%
AGTGTCTATCAAAAAGGTAA+AGG + Chr8:75272342-75272361 None:intergenic 30.0%
ATATATACCATATCCTTCCA+AGG + Chr8:75271810-75271829 None:intergenic 30.0%
ATGGAAATAGCTATGTTCTA+TGG + Chr8:75274724-75274743 None:intergenic 30.0%
ATGTAATTATAGCCTCATTG+TGG - Chr8:75271343-75271362 MsG0880046594.01.T01:intron 30.0%
CAATTCAGTGTCTATCAAAA+AGG + Chr8:75272348-75272367 None:intergenic 30.0%
CACCATATTTGAATATCTTC+AGG - Chr8:75271421-75271440 MsG0880046594.01.T01:intron 30.0%
CTTAAAAATGAATGGCAAGA+GGG + Chr8:75273079-75273098 None:intergenic 30.0%
GGTTTAAAGGATATCTTAGT+TGG + Chr8:75274146-75274165 None:intergenic 30.0%
GTGTTATACTCACCTAAATA+TGG + Chr8:75275764-75275783 None:intergenic 30.0%
GTTAGACACTGAATTCTATA+TGG - Chr8:75272315-75272334 MsG0880046594.01.T01:intron 30.0%
GTTTATTCTTCTTTAAGTGC+GGG + Chr8:75272471-75272490 None:intergenic 30.0%
TAAATCATTCGGATACTTCT+GGG - Chr8:75274321-75274340 MsG0880046594.01.T01:intron 30.0%
TAACAAAACAGGAAGCAATT+TGG - Chr8:75275417-75275436 MsG0880046594.01.T01:intron 30.0%
TGATTATTGCAATCAACCAT+GGG - Chr8:75271548-75271567 MsG0880046594.01.T01:intron 30.0%
TGCATGTTATTCATGTTGTA+TGG - Chr8:75270864-75270883 MsG0880046594.01.T01:CDS 30.0%
TGGTTGGAAATAAAGAGAAA+AGG + Chr8:75274563-75274582 None:intergenic 30.0%
TTAAATCATTCGGATACTTC+TGG - Chr8:75274320-75274339 MsG0880046594.01.T01:intron 30.0%
TTACAAAACTCGAACCATTA+TGG - Chr8:75273673-75273692 MsG0880046594.01.T01:intron 30.0%
TTTATATTGAGGATTCCAGT+AGG - Chr8:75272969-75272988 MsG0880046594.01.T01:intron 30.0%
! AAAGGTGTGCAAATTAATAG+AGG + Chr8:75274545-75274564 None:intergenic 30.0%
! ATCGTACTTTTGTATATACC+TGG - Chr8:75273367-75273386 MsG0880046594.01.T01:intron 30.0%
! ATTTGGTGGAGAAAATGAAA+TGG - Chr8:75273551-75273570 MsG0880046594.01.T01:intron 30.0%
! CGTATCTTTCAAGGTATTAA+TGG - Chr8:75272287-75272306 MsG0880046594.01.T01:intron 30.0%
! CTCTGAAAGAAGTTTAATCA+AGG + Chr8:75272939-75272958 None:intergenic 30.0%
! GTTTGTATGATTTTAGGCAT+TGG + Chr8:75270775-75270794 None:intergenic 30.0%
! TATTCAAATATGGTGCTGAA+AGG + Chr8:75271416-75271435 None:intergenic 30.0%
!! AGAGTTTTGATCAAAGAACA+TGG - Chr8:75272409-75272428 MsG0880046594.01.T01:intron 30.0%
!! GTAATGACAACTTTGGAATA+AGG + Chr8:75275996-75276015 None:intergenic 30.0%
!! TAGCACAGTGAAGTTTTAAT+AGG - Chr8:75274591-75274610 MsG0880046594.01.T01:intron 30.0%
!! TCTTGCCATTCATTTTTAAG+TGG - Chr8:75273079-75273098 MsG0880046594.01.T01:intron 30.0%
!! TTGTTTGGTGTCAAAGTTAA+CGG + Chr8:75273708-75273727 None:intergenic 30.0%
!!! GATTAAGCTGTTCCTTTTTT+AGG + Chr8:75274823-75274842 None:intergenic 30.0%
!!! TTCAGTTTTGTTTCAAACAC+CGG - Chr8:75273599-75273618 MsG0880046594.01.T01:intron 30.0%
AAATTCTGTCCCATTAGGAT+CGG + Chr8:75275615-75275634 None:intergenic 35.0%
AACATGCGACAAGAAAATAG+AGG + Chr8:75272150-75272169 None:intergenic 35.0%
AACTGAAGTTGTCAACATAG+CGG + Chr8:75270352-75270371 None:intergenic 35.0%
AATAATTTAATCCACCCCCA+TGG + Chr8:75271567-75271586 None:intergenic 35.0%
AATGAAATGGAAGGAAACTG+AGG - Chr8:75273564-75273583 MsG0880046594.01.T01:intron 35.0%
ACCAACGACTTAAACATTCA+AGG - Chr8:75270700-75270719 MsG0880046594.01.T01:intron 35.0%
ACCTTGAATGTTTAAGTCGT+TGG + Chr8:75270704-75270723 None:intergenic 35.0%
AGATAATTGGAATGTCAACG+AGG - Chr8:75271727-75271746 MsG0880046594.01.T01:intron 35.0%
AGATGTATGAGAAATGTCCT+GGG - Chr8:75275473-75275492 MsG0880046594.01.T01:intron 35.0%
AGCATTTCTCTGCTTATTGT+TGG + Chr8:75274894-75274913 None:intergenic 35.0%
AGTTGGAATGATGAATGTGA+TGG + Chr8:75274979-75274998 None:intergenic 35.0%
ATACTCGTGGATAAGAAAGA+TGG + Chr8:75274743-75274762 None:intergenic 35.0%
ATGAAATGGAAGGAAACTGA+GGG - Chr8:75273565-75273584 MsG0880046594.01.T01:intron 35.0%
ATGACAAATTCTGTCCCATT+AGG + Chr8:75275620-75275639 None:intergenic 35.0%
ATGCCTTGAAAATTGCAACA+AGG + Chr8:75273038-75273057 None:intergenic 35.0%
ATTATTGCAATCAACCATGG+GGG - Chr8:75271550-75271569 MsG0880046594.01.T01:intron 35.0%
ATTGTTTGTGTAACTTCTGG+CGG - Chr8:75270296-75270315 MsG0880046594.01.T01:CDS 35.0%
CAAAAATGTTGTCAGTGCTT+AGG - Chr8:75272238-75272257 MsG0880046594.01.T01:intron 35.0%
CAAGATAAAACATTGCACGT+GGG + Chr8:75271761-75271780 None:intergenic 35.0%
CAATAATCACTCGGATAAAC+AGG + Chr8:75271537-75271556 None:intergenic 35.0%
CACTTTATGATGTTCCTCAA+AGG - Chr8:75270936-75270955 MsG0880046594.01.T01:CDS 35.0%
CAGCAAATTCAAGATAACTC+TGG + Chr8:75271133-75271152 None:intergenic 35.0%
CATAGTGCAGGTTGTTTATA+TGG + Chr8:75274177-75274196 None:intergenic 35.0%
CATATCTGTTGCATCAAACA+AGG + Chr8:75271477-75271496 None:intergenic 35.0%
CATTATCTATGTTTCCACCA+AGG - Chr8:75272524-75272543 MsG0880046594.01.T01:intron 35.0%
CGCATTACTATAGAGCTTTA+TGG - Chr8:75275245-75275264 MsG0880046594.01.T01:intron 35.0%
CTCTGACAGGTATTCAATTA+AGG - Chr8:75272628-75272647 MsG0880046594.01.T01:intron 35.0%
CTGTTTCAAACTTGTCATGT+TGG + Chr8:75275828-75275847 None:intergenic 35.0%
CTTGCAACCAGTTTAAACTT+AGG + Chr8:75275555-75275574 None:intergenic 35.0%
CTTGTTTGATGCAACAGATA+TGG - Chr8:75271475-75271494 MsG0880046594.01.T01:intron 35.0%
GAAAAGAGCAAACAAACAAG+AGG - Chr8:75273286-75273305 MsG0880046594.01.T01:intron 35.0%
GAGATTGATCAAGAAGAAGT+TGG - Chr8:75275587-75275606 MsG0880046594.01.T01:CDS 35.0%
GATACCTTAAGGATACGTTA+AGG + Chr8:75274365-75274384 None:intergenic 35.0%
GATTATTGCAATCAACCATG+GGG - Chr8:75271549-75271568 MsG0880046594.01.T01:intron 35.0%
GCAATTCTTATCTATGTGTC+GGG + Chr8:75272717-75272736 None:intergenic 35.0%
GGACATTTGAATCTCCTATA+TGG - Chr8:75271496-75271515 MsG0880046594.01.T01:intron 35.0%
GGTTGATTGCAATAATCACT+CGG + Chr8:75271546-75271565 None:intergenic 35.0%
GTATCCTTAACGTATCCTTA+AGG - Chr8:75274358-75274377 MsG0880046594.01.T01:intron 35.0%
GTGATTATTGCAATCAACCA+TGG - Chr8:75271547-75271566 MsG0880046594.01.T01:intron 35.0%
GTGCAAATTAATAGAGGAAG+AGG + Chr8:75274539-75274558 None:intergenic 35.0%
GTGTTGAGAAGATTACTGTT+CGG - Chr8:75272877-75272896 MsG0880046594.01.T01:intron 35.0%
TAAGAATTGCTTTCCTCCTT+TGG - Chr8:75272727-75272746 MsG0880046594.01.T01:intron 35.0%
TACGATAAATGCCAAACCAA+CGG + Chr8:75273353-75273372 None:intergenic 35.0%
TATCTGACTACTATGTTCCT+TGG - Chr8:75271790-75271809 MsG0880046594.01.T01:intron 35.0%
TATGTTGACAACTTCAGTTC+AGG - Chr8:75270353-75270372 MsG0880046594.01.T01:CDS 35.0%
TCCCCTGCATAAATATTCAT+TGG + Chr8:75270620-75270639 None:intergenic 35.0%
TCTACTATCTTGAGAGTAAC+AGG - Chr8:75270452-75270471 MsG0880046594.01.T01:intron 35.0%
TGAATGTTTAAGTCGTTGGT+GGG + Chr8:75270700-75270719 None:intergenic 35.0%
TGACTATCTTCATACTACCT+TGG + Chr8:75274206-75274225 None:intergenic 35.0%
TGAGAGTTCATTTGCAACAA+CGG + Chr8:75272826-75272845 None:intergenic 35.0%
TTAAACTGGTTGCAAGACTA+GGG - Chr8:75275559-75275578 MsG0880046594.01.T01:intron 35.0%
TTGAATGTTTAAGTCGTTGG+TGG + Chr8:75270701-75270720 None:intergenic 35.0%
TTGCAAATGAACTCTCAACT+CGG - Chr8:75272829-75272848 MsG0880046594.01.T01:intron 35.0%
TTGCAGATGTTGCAGATAAT+TGG - Chr8:75271714-75271733 MsG0880046594.01.T01:intron 35.0%
TTTAAACTGGTTGCAAGACT+AGG - Chr8:75275558-75275577 MsG0880046594.01.T01:intron 35.0%
! AGATATCGTCACTGACTAAA+TGG + Chr8:75275799-75275818 None:intergenic 35.0%
! ATTTTGCAGGTACTTTCTGA+AGG - Chr8:75270484-75270503 MsG0880046594.01.T01:intron 35.0%
! GAACAAATTTTGCACCAATG+TGG + Chr8:75274635-75274654 None:intergenic 35.0%
! GAGACATGCCATTTATATTG+AGG - Chr8:75272958-75272977 MsG0880046594.01.T01:intron 35.0%
! GTAGATTTTCCTGCACTAAT+TGG - Chr8:75271669-75271688 MsG0880046594.01.T01:intron 35.0%
! TCTCCTTGTTGCAATTTTCA+AGG - Chr8:75273032-75273051 MsG0880046594.01.T01:intron 35.0%
!! AGGATATCTTAGTTGGTGAA+TGG + Chr8:75274139-75274158 None:intergenic 35.0%
!! GAAAAACTTGTTGAGAAGTG+AGG - Chr8:75275445-75275464 MsG0880046594.01.T01:intron 35.0%
!! GGTTCGAGTTTTGTAACTTT+TGG + Chr8:75273669-75273688 None:intergenic 35.0%
!! TCGAGTTTTGTAACTTTTGG+AGG + Chr8:75273666-75273685 None:intergenic 35.0%
!! TTTTACTATTCCCGTTGGTT+TGG - Chr8:75273339-75273358 MsG0880046594.01.T01:intron 35.0%
!!! CTAAGCACTGACAACATTTT+TGG + Chr8:75272240-75272259 None:intergenic 35.0%
!!! GATATTTTAGCTATGAAGCC+CGG + Chr8:75274514-75274533 None:intergenic 35.0%
!!! TAGTCACCCTTTTCAAGTAA+TGG - Chr8:75274220-75274239 MsG0880046594.01.T01:intron 35.0%
!!! TTTTTGGGACCTCAGAAAAT+GGG - Chr8:75270261-75270280 MsG0880046594.01.T01:CDS 35.0%
AAAATAGCATTCCACACGAG+AGG - Chr8:75272581-75272600 MsG0880046594.01.T01:intron 40.0%
AAATCTCTTCCAAATGACGG+TGG - Chr8:75273264-75273283 MsG0880046594.01.T01:intron 40.0%
AAATGAACTCTCAACTCGGA+AGG - Chr8:75272833-75272852 MsG0880046594.01.T01:intron 40.0%
AACACGAGCTCTCCATATTT+AGG - Chr8:75275749-75275768 MsG0880046594.01.T01:CDS 40.0%
AACTTCAGTTCAGGTCATAG+AGG - Chr8:75270362-75270381 MsG0880046594.01.T01:CDS 40.0%
AAGGAGAAGAAACCAAAGGT+TGG + Chr8:75273019-75273038 None:intergenic 40.0%
AAGTTGGAACCGATCCTAAT+GGG - Chr8:75275603-75275622 MsG0880046594.01.T01:CDS 40.0%
AATGTCCTGGGACTAAAAAG+TGG - Chr8:75275485-75275504 MsG0880046594.01.T01:intron 40.0%
ACCAGTTTAAACTTAGGAGG+TGG + Chr8:75275549-75275568 None:intergenic 40.0%
ACGATAAATGCCAAACCAAC+GGG + Chr8:75273352-75273371 None:intergenic 40.0%
ACTTCAGTTCAGGTCATAGA+GGG - Chr8:75270363-75270382 MsG0880046594.01.T01:CDS 40.0%
AGGTTTAGCAAGATTGTCAG+TGG - Chr8:75275292-75275311 MsG0880046594.01.T01:intron 40.0%
AGTAATCTTCTCAACACCAG+TGG + Chr8:75272874-75272893 None:intergenic 40.0%
ATGAAGGGTTGAATGGTTGA+AGG + Chr8:75274944-75274963 None:intergenic 40.0%
ATGTGGGTCCCTTTAGATAT+TGG + Chr8:75274658-75274677 None:intergenic 40.0%
ATTGGATTGTTCACAAGGTG+CGG - Chr8:75273417-75273436 MsG0880046594.01.T01:CDS 40.0%
CAACAAGGAGAAGAAACCAA+AGG + Chr8:75273023-75273042 None:intergenic 40.0%
CAAGGCAAGTTCATCATACT+CGG + Chr8:75270399-75270418 None:intergenic 40.0%
CAGGACCAGAAATTTACCTA+CGG + Chr8:75270535-75270554 None:intergenic 40.0%
CTAAAGAAAAGGCTAATCGC+AGG + Chr8:75270554-75270573 None:intergenic 40.0%
CTATCTTGAGAGTAACAGGT+CGG - Chr8:75270456-75270475 MsG0880046594.01.T01:intron 40.0%
CTATGTTCCTTGGAAGGATA+TGG - Chr8:75271800-75271819 MsG0880046594.01.T01:intron 40.0%
CTGTACCGTAGGTAAATTTC+TGG - Chr8:75270527-75270546 MsG0880046594.01.T01:CDS 40.0%
CTGTTATCTTTCTGTACCGT+AGG - Chr8:75270516-75270535 MsG0880046594.01.T01:CDS 40.0%
GAAGCTTATAGGAGACAAGA+GGG - Chr8:75275941-75275960 MsG0880046594.01.T01:CDS 40.0%
GAGAGGATCAAAATACCTCT+CGG - Chr8:75272598-75272617 MsG0880046594.01.T01:intron 40.0%
GAGATGTATGAGAAATGTCC+TGG - Chr8:75275472-75275491 MsG0880046594.01.T01:intron 40.0%
GATAGAGTAAAGGATACTCG+TGG + Chr8:75274756-75274775 None:intergenic 40.0%
GCAACCAGTTTAAACTTAGG+AGG + Chr8:75275552-75275571 None:intergenic 40.0%
GCAAGATAAAACATTGCACG+TGG + Chr8:75271762-75271781 None:intergenic 40.0%
GGATACGTTAAGGATACTCT+CGG + Chr8:75274355-75274374 None:intergenic 40.0%
GGCTTACAATTTACAAGCGT+AGG + Chr8:75271456-75271475 None:intergenic 40.0%
GGTGGAGAAAATGAAATGGA+AGG - Chr8:75273555-75273574 MsG0880046594.01.T01:intron 40.0%
GTCAGTGCTTAGGAAAGATT+GGG - Chr8:75272248-75272267 MsG0880046594.01.T01:intron 40.0%
GTGGAATGAAAACCACAATG+AGG + Chr8:75271358-75271377 None:intergenic 40.0%
GTTACCAACAGTGACAAACT+AGG - Chr8:75275132-75275151 MsG0880046594.01.T01:intron 40.0%
TATGAAGCTCGATACGGATA+CGG - Chr8:75273913-75273932 MsG0880046594.01.T01:intron 40.0%
TCTATAGTAATGCGACCAAC+TGG + Chr8:75275239-75275258 None:intergenic 40.0%
TGAAGGGTTGAATGGTTGAA+GGG + Chr8:75274943-75274962 None:intergenic 40.0%
TGACTACTATGTTCCTTGGA+AGG - Chr8:75271794-75271813 MsG0880046594.01.T01:intron 40.0%
TGCAACATCTGCAAAACAGA+AGG + Chr8:75271708-75271727 None:intergenic 40.0%
TGTCAGTGCTTAGGAAAGAT+TGG - Chr8:75272247-75272266 MsG0880046594.01.T01:intron 40.0%
TGTGGGTCCCTTTAGATATT+GGG + Chr8:75274657-75274676 None:intergenic 40.0%
TTCACTGTGCTAGAAACGTT+TGG + Chr8:75274583-75274602 None:intergenic 40.0%
TTCGGAAAATGTGGTGTAGT+TGG + Chr8:75275006-75275025 None:intergenic 40.0%
TTCGTCTCTGGTAATTGGAA+GGG - Chr8:75275670-75275689 MsG0880046594.01.T01:intron 40.0%
TTGTCGCATGTTAATCTTGC+AGG - Chr8:75272158-75272177 MsG0880046594.01.T01:intron 40.0%
TTGTGAGATGAAGGGTTGAA+TGG + Chr8:75274951-75274970 None:intergenic 40.0%
TTTGCACCAATGTGGCATTT+GGG + Chr8:75274627-75274646 None:intergenic 40.0%
TTTGTTTCAAACACCGGAGA+GGG - Chr8:75273605-75273624 MsG0880046594.01.T01:intron 40.0%
! ATCTCCTAGTTTGTCACTGT+TGG + Chr8:75275139-75275158 None:intergenic 40.0%
! ATTTAGGATACGATACGGCT+TGG - Chr8:75273984-75274003 MsG0880046594.01.T01:intron 40.0%
! GGTTGTACAGAAGATTAGTC+AGG - Chr8:75275709-75275728 MsG0880046594.01.T01:intron 40.0%
! TAAAAAGTGGCTGGTAGTGT+AGG - Chr8:75275498-75275517 MsG0880046594.01.T01:intron 40.0%
! TGTTTGAGGTTCGGAAAATG+TGG + Chr8:75275015-75275034 None:intergenic 40.0%
! TGTTTTCTTTCAGTGCAGCT+GGG + Chr8:75275177-75275196 None:intergenic 40.0%
! TTGTTTTCTTTCAGTGCAGC+TGG + Chr8:75275178-75275197 None:intergenic 40.0%
! TTTTGCACCAATGTGGCATT+TGG + Chr8:75274628-75274647 None:intergenic 40.0%
!! AAACTTGTTGAGAAGTGAGG+AGG - Chr8:75275448-75275467 MsG0880046594.01.T01:intron 40.0%
!! ACAATCTGCATTGCTGTTTG+AGG + Chr8:75275029-75275048 None:intergenic 40.0%
!! ACTTGCTTGCTGCTTCTTTT+GGG - Chr8:75275078-75275097 MsG0880046594.01.T01:CDS 40.0%
!! ATACTTCTGGGATACGTATC+CGG - Chr8:75274333-75274352 MsG0880046594.01.T01:intron 40.0%
!! CACATATTGGTTAGCCTTTG+AGG + Chr8:75270953-75270972 None:intergenic 40.0%
!! TACTTGCTTGCTGCTTCTTT+TGG - Chr8:75275077-75275096 MsG0880046594.01.T01:CDS 40.0%
!! TGACAACTTTGGAATAAGGG+CGG + Chr8:75275992-75276011 None:intergenic 40.0%
!! TTGCTGCTTCTTTTGGGTAA+TGG - Chr8:75275084-75275103 MsG0880046594.01.T01:CDS 40.0%
!! TTGGCTTTTACTATTCCCGT+TGG - Chr8:75273334-75273353 MsG0880046594.01.T01:intron 40.0%
!! TTTTGTTTCAAACACCGGAG+AGG - Chr8:75273604-75273623 MsG0880046594.01.T01:intron 40.0%
!!! GTTTTTGGGACCTCAGAAAA+TGG - Chr8:75270260-75270279 MsG0880046594.01.T01:CDS 40.0%
!!! TTTTGGGACCTCAGAAAATG+GGG - Chr8:75270262-75270281 MsG0880046594.01.T01:CDS 40.0%
AAAGATACGCAGAATGCCAG+AGG + Chr8:75272276-75272295 None:intergenic 45.0%
AAGTAAGGGATCCTCAGGAA+GGG + Chr8:75270665-75270684 None:intergenic 45.0%
AGGATCAAAATACCTCTCGG+TGG - Chr8:75272601-75272620 MsG0880046594.01.T01:intron 45.0%
ATACGGGTACGATACGATAC+GGG - Chr8:75273936-75273955 MsG0880046594.01.T01:intron 45.0%
ATGCCGAATTACGTCCAACA+TGG - Chr8:75275358-75275377 MsG0880046594.01.T01:intron 45.0%
CATTCAAGTAAGGGATCCTC+AGG + Chr8:75270670-75270689 None:intergenic 45.0%
CATTGCAACAAAGGATTCGC+CGG - Chr8:75275637-75275656 MsG0880046594.01.T01:intron 45.0%
CCTGCACTATGATGATACCA+AGG - Chr8:75274186-75274205 MsG0880046594.01.T01:intron 45.0%
CCTTGGTATCATCATAGTGC+AGG + Chr8:75274189-75274208 None:intergenic 45.0%
CGAAGCTTATAGGAGACAAG+AGG - Chr8:75275940-75275959 MsG0880046594.01.T01:CDS 45.0%
CTGCTGGTATAAGCTACAGA+AGG - Chr8:75275317-75275336 MsG0880046594.01.T01:intron 45.0%
CTGTGCTAGAAACGTTTGGT+TGG + Chr8:75274579-75274598 None:intergenic 45.0%
CTTCAGTTCAGGTCATAGAG+GGG - Chr8:75270364-75270383 MsG0880046594.01.T01:CDS 45.0%
CTTCGTCTCTGGTAATTGGA+AGG - Chr8:75275669-75275688 MsG0880046594.01.T01:intron 45.0%
GAACAAGCTTTACGTCCAAG+AGG + Chr8:75272212-75272231 None:intergenic 45.0%
GAAGTTGGAACCGATCCTAA+TGG - Chr8:75275602-75275621 MsG0880046594.01.T01:CDS 45.0%
GAGAGGGATTGGAATTGGAA+CGG - Chr8:75273621-75273640 MsG0880046594.01.T01:intron 45.0%
GATACGGGTACGATACGATA+CGG - Chr8:75273935-75273954 MsG0880046594.01.T01:intron 45.0%
GATGCTTCGTCTCTGGTAAT+TGG - Chr8:75275665-75275684 MsG0880046594.01.T01:intron 45.0%
GATTCCAGTAGGTGACTCTA+TGG - Chr8:75272980-75272999 MsG0880046594.01.T01:intron 45.0%
GCAGAGCTAGCTAACAAAAC+AGG - Chr8:75275406-75275425 MsG0880046594.01.T01:intron 45.0%
GCCACCTCCTAAGTTTAAAC+TGG - Chr8:75275545-75275564 MsG0880046594.01.T01:intron 45.0%
GCTTATTGTTGGCACTGCTT+AGG + Chr8:75274883-75274902 None:intergenic 45.0%
GGAATGTCAACGAGGTGTAT+TGG - Chr8:75271735-75271754 MsG0880046594.01.T01:intron 45.0%
GGCATTCTGCGTATCTTTCA+AGG - Chr8:75272278-75272297 MsG0880046594.01.T01:intron 45.0%
GGTGTCAAAGTTAACGGTGA+CGG + Chr8:75273702-75273721 None:intergenic 45.0%
GTGGAGCACAAAATTCAGTC+AGG - Chr8:75272180-75272199 MsG0880046594.01.T01:intron 45.0%
TATCCGATACGTATCCGACA+CGG - Chr8:75274466-75274485 MsG0880046594.01.T01:CDS 45.0%
TCAGGAAGGGATCTGCAAAA+TGG + Chr8:75270652-75270671 None:intergenic 45.0%
TCGCATGTTAATCTTGCAGG+TGG - Chr8:75272161-75272180 MsG0880046594.01.T01:intron 45.0%
TCTAAGCCCAAATGCCACAT+TGG - Chr8:75274618-75274637 MsG0880046594.01.T01:intron 45.0%
TCTTTGACGTGTCCGTTGAT+CGG - Chr8:75275210-75275229 MsG0880046594.01.T01:intron 45.0%
TGTTGGCACTGCTTAGGAAT+TGG + Chr8:75274877-75274896 None:intergenic 45.0%
TTCCAATTCCAATCCCTCTC+CGG + Chr8:75273621-75273640 None:intergenic 45.0%
TTGGATTGTTCACAAGGTGC+GGG - Chr8:75273418-75273437 MsG0880046594.01.T01:CDS 45.0%
! AGAGACGAAGCATCTAGTTC+CGG + Chr8:75275659-75275678 None:intergenic 45.0%
! ATTTTGCAGATCCCTTCCTG+AGG - Chr8:75270651-75270670 MsG0880046594.01.T01:CDS 45.0%
! GGCTCGAAGCATTCAAGTAA+GGG + Chr8:75270679-75270698 None:intergenic 45.0%
! GTGACTCTATGGACTGACTT+TGG - Chr8:75272991-75273010 MsG0880046594.01.T01:intron 45.0%
! GTGCGGGGAATTTTTGACAT+GGG - Chr8:75273434-75273453 MsG0880046594.01.T01:CDS 45.0%
! TGCTCTTTTCCACCGTCATT+TGG + Chr8:75273276-75273295 None:intergenic 45.0%
! TGTGGTTTTCATTCCACTGC+AGG - Chr8:75271361-75271380 MsG0880046594.01.T01:intron 45.0%
! TTCATCATACTCGGTGGATG+TGG + Chr8:75270390-75270409 None:intergenic 45.0%
! TTTCCTCCTTTGGTGACAGT+TGG - Chr8:75272737-75272756 MsG0880046594.01.T01:intron 45.0%
!! AACTTAGGAGGTGGCTTTGA+TGG + Chr8:75275540-75275559 None:intergenic 45.0%
!! ACTTAGGAGGTGGCTTTGAT+GGG + Chr8:75275539-75275558 None:intergenic 45.0%
!! ATGGTGCTGTTGTGAGATGA+AGG + Chr8:75274960-75274979 None:intergenic 45.0%
!! CTGCATTGCTGTTTGAGGTT+CGG + Chr8:75275024-75275043 None:intergenic 45.0%
!! GTGGTGTAGTTGGTAACAGT+TGG + Chr8:75274996-75275015 None:intergenic 45.0%
!! TACTTCTGGGATACGTATCC+GGG - Chr8:75274334-75274353 MsG0880046594.01.T01:intron 45.0%
!! TAGCACTGACCAATTAGTGC+AGG + Chr8:75271681-75271700 None:intergenic 45.0%
!! TGGTGCTGTTGTGAGATGAA+GGG + Chr8:75274959-75274978 None:intergenic 45.0%
!!! GGTATTTTGATCCTCTCGTG+TGG + Chr8:75272595-75272614 None:intergenic 45.0%
!! AAATATAAATAGAAATAAAA+AGG + Chr8:75271098-75271117 None:intergenic 5.0%
!! AATATAAATAGAAATAAAAA+GGG + Chr8:75271097-75271116 None:intergenic 5.0%
!! TAAAAATAAATTAAATCATT+CGG - Chr8:75274400-75274419 MsG0880046594.01.T01:intron 5.0%
!! TAAAATTAAATTAAATCATT+CGG - Chr8:75274310-75274329 MsG0880046594.01.T01:intron 5.0%
!!! ATATTTGATTTTTTTTTTAA+TGG - Chr8:75273180-75273199 MsG0880046594.01.T01:intron 5.0%
!!! TTTTTTTTTTTATTTTAGTT+CGG - Chr8:75271162-75271181 MsG0880046594.01.T01:intron 5.0%
AACAGGGTGGCGAAGCTTAT+AGG - Chr8:75275930-75275949 MsG0880046594.01.T01:CDS 50.0%
AAGATTGTCAGTGGAGCTGC+TGG - Chr8:75275301-75275320 MsG0880046594.01.T01:intron 50.0%
AGGGAACTTCGCAGTACTCT+TGG + Chr8:75274924-75274943 None:intergenic 50.0%
AGGGCTGTTGTTGCAGAAAG+AGG - Chr8:75275960-75275979 MsG0880046594.01.T01:CDS 50.0%
ATACGTATCCGACACGGGTA+CGG - Chr8:75274472-75274491 MsG0880046594.01.T01:CDS 50.0%
ATCCGATACGTATCCGACAC+GGG - Chr8:75274467-75274486 MsG0880046594.01.T01:CDS 50.0%
ATGGCGGCCTTAGATCCTAT+GGG - Chr8:75275377-75275396 MsG0880046594.01.T01:intron 50.0%
ATTGCAATCAACCATGGGGG+TGG - Chr8:75271553-75271572 MsG0880046594.01.T01:intron 50.0%
CAAGTAAGGGATCCTCAGGA+AGG + Chr8:75270666-75270685 None:intergenic 50.0%
CAGTCCATAGAGTCACCTAC+TGG + Chr8:75272987-75273006 None:intergenic 50.0%
CATCCACCCCATAGGATCTA+AGG + Chr8:75275387-75275406 None:intergenic 50.0%
CCGAATTACGTCCAACATGG+CGG - Chr8:75275361-75275380 MsG0880046594.01.T01:intron 50.0%
CCGCCATGTTGGACGTAATT+CGG + Chr8:75275364-75275383 None:intergenic 50.0%
CCTCAGAAAATGGGGAAGCT+AGG - Chr8:75270270-75270289 MsG0880046594.01.T01:CDS 50.0%
CTAAACCTCTCACTCCTGCA+GGG + Chr8:75275280-75275299 None:intergenic 50.0%
CTCGATACGGATACGGATAC+GGG - Chr8:75273920-75273939 MsG0880046594.01.T01:intron 50.0%
CTGGTAATTGGAAGGGTGGT+AGG - Chr8:75275677-75275696 MsG0880046594.01.T01:intron 50.0%
CTGTCTCCAACTGTCACCAA+AGG + Chr8:75272746-75272765 None:intergenic 50.0%
CTTTGACGTGTCCGTTGATC+GGG - Chr8:75275211-75275230 MsG0880046594.01.T01:intron 50.0%
GAAGCCCGGATACTCCAAAA+TGG + Chr8:75274500-75274519 None:intergenic 50.0%
GAAGGGATCTGCAAAATGGC+TGG + Chr8:75270648-75270667 None:intergenic 50.0%
GCTCGATACGGATACGGATA+CGG - Chr8:75273919-75273938 MsG0880046594.01.T01:intron 50.0%
GGAACTAGATGCTTCGTCTC+TGG - Chr8:75275658-75275677 MsG0880046594.01.T01:intron 50.0%
GGCAAGTTCATCATACTCGG+TGG + Chr8:75270396-75270415 None:intergenic 50.0%
GGGAACTTCGCAGTACTCTT+GGG + Chr8:75274923-75274942 None:intergenic 50.0%
GTAATTGGAAGGGTGGTAGG+AGG - Chr8:75275680-75275699 MsG0880046594.01.T01:intron 50.0%
GTCTCTGGTAATTGGAAGGG+TGG - Chr8:75275673-75275692 MsG0880046594.01.T01:intron 50.0%
GTCTTCTTCTGCTCTTGCTC+TGG + Chr8:75275112-75275131 None:intergenic 50.0%
TACCCGTGTCGGATACGTAT+CGG + Chr8:75274472-75274491 None:intergenic 50.0%
TAGGAAAGATTGGGCTCCTC+TGG - Chr8:75272257-75272276 MsG0880046594.01.T01:intron 50.0%
TATCGGATACCGATACTCCG+CGG + Chr8:75274455-75274474 None:intergenic 50.0%
TATGGAGATGATGTCCCTGC+AGG - Chr8:75275263-75275282 MsG0880046594.01.T01:intron 50.0%
TCAGTCAGGAACTCACCTCT+TGG - Chr8:75272194-75272213 MsG0880046594.01.T01:intron 50.0%
TCCTGGGACTAAAAAGTGGC+TGG - Chr8:75275489-75275508 MsG0880046594.01.T01:intron 50.0%
TCTCCAACTGTCACCAAAGG+AGG + Chr8:75272743-75272762 None:intergenic 50.0%
TCTTGAGAGTAACAGGTCGG+TGG - Chr8:75270459-75270478 MsG0880046594.01.T01:intron 50.0%
TGGATTGTTCACAAGGTGCG+GGG - Chr8:75273419-75273438 MsG0880046594.01.T01:CDS 50.0%
TTCAAACACCGGAGAGGGAT+TGG - Chr8:75273610-75273629 MsG0880046594.01.T01:intron 50.0%
! ACCAACTGGTTCCCGATCAA+CGG + Chr8:75275225-75275244 None:intergenic 50.0%
! CCTAGCTTCCCCATTTTCTG+AGG + Chr8:75270273-75270292 None:intergenic 50.0%
! CTGACTTTGGCTCCAACCTT+TGG - Chr8:75273004-75273023 MsG0880046594.01.T01:intron 50.0%
! GGGCTCGAAGCATTCAAGTA+AGG + Chr8:75270680-75270699 None:intergenic 50.0%
! GGTGCGGGGAATTTTTGACA+TGG - Chr8:75273433-75273452 MsG0880046594.01.T01:CDS 50.0%
! TGCAGGTACTTTCTGAAGGC+TGG - Chr8:75270488-75270507 MsG0880046594.01.T01:intron 50.0%
!! AACGGTGACGGAGTCCATAA+TGG + Chr8:75273690-75273709 None:intergenic 50.0%
!! AGCAGTGAAGAGTGCTATCG+TGG - Chr8:75271199-75271218 MsG0880046594.01.T01:intron 50.0%
!! CAGGTCGGTGGTTATTTTGC+AGG - Chr8:75270471-75270490 MsG0880046594.01.T01:intron 50.0%
!!! ACCAGCCACTTTTTAGTCCC+AGG + Chr8:75275493-75275512 None:intergenic 50.0%
!!! CGGCACCATTTTGGAGTATC+CGG - Chr8:75274492-75274511 MsG0880046594.01.T01:CDS 50.0%
!!! GGCACCATTTTGGAGTATCC+GGG - Chr8:75274493-75274512 MsG0880046594.01.T01:CDS 50.0%
AACTCGGAAGGAGCAAGTGG+TGG - Chr8:75272845-75272864 MsG0880046594.01.T01:intron 55.0%
AAGGGTGGTAGGAGGAATGG+AGG - Chr8:75275688-75275707 MsG0880046594.01.T01:intron 55.0%
ATTCCACTGCAGGCAGTAGC+AGG - Chr8:75271371-75271390 MsG0880046594.01.T01:intron 55.0%
CACCGGAGAGGGATTGGAAT+TGG - Chr8:75273616-75273635 MsG0880046594.01.T01:intron 55.0%
CATGGCGGCCTTAGATCCTA+TGG - Chr8:75275376-75275395 MsG0880046594.01.T01:intron 55.0%
CCACTGCTCCATTGGAGCAA+CGG - Chr8:75270321-75270340 MsG0880046594.01.T01:CDS 55.0%
CTCAACTCGGAAGGAGCAAG+TGG - Chr8:75272842-75272861 MsG0880046594.01.T01:intron 55.0%
GCTAAACCTCTCACTCCTGC+AGG + Chr8:75275281-75275300 None:intergenic 55.0%
TCCGTTGATCGGGAACCAGT+TGG - Chr8:75275221-75275240 MsG0880046594.01.T01:intron 55.0%
TCTCGGTGGTGATCTCTGAC+AGG - Chr8:75272615-75272634 MsG0880046594.01.T01:intron 55.0%
TGGAAGGGTGGTAGGAGGAA+TGG - Chr8:75275685-75275704 MsG0880046594.01.T01:intron 55.0%
TGGCGGCCTTAGATCCTATG+GGG - Chr8:75275378-75275397 MsG0880046594.01.T01:intron 55.0%
TGTCAGAGATCACCACCGAG+AGG + Chr8:75272616-75272635 None:intergenic 55.0%
! ACACGGGTACGGCACCATTT+TGG - Chr8:75274483-75274502 MsG0880046594.01.T01:CDS 55.0%
! AGGATCTAAGGCCGCCATGT+TGG + Chr8:75275375-75275394 None:intergenic 55.0%
! TAGCTCTGCATCCACCCCAT+AGG + Chr8:75275395-75275414 None:intergenic 55.0%
!! AAATGGTGCCGTACCCGTGT+CGG + Chr8:75274483-75274502 None:intergenic 55.0%
!! TACGTATCCGGGAGTATCCG+CGG - Chr8:75274435-75274454 MsG0880046594.01.T01:intron 55.0%
CCGTTGCTCCAATGGAGCAG+TGG + Chr8:75270324-75270343 None:intergenic 60.0%
CGATACTCCGCGGATACTCC+CGG + Chr8:75274445-75274464 None:intergenic 60.0%
CGGCCTTAGATCCTATGGGG+TGG - Chr8:75275381-75275400 MsG0880046594.01.T01:intron 60.0%
GAGCAAGTGGTGGTCACCAC+TGG - Chr8:75272855-75272874 MsG0880046594.01.T01:intron 60.0%
GATGTCCCTGCAGGAGTGAG+AGG - Chr8:75275272-75275291 MsG0880046594.01.T01:intron 60.0%
TGGCGGTACCACTGCTCCAT+TGG - Chr8:75270313-75270332 MsG0880046594.01.T01:CDS 60.0%
!! CGGGAGTATCCGCGGAGTAT+CGG - Chr8:75274443-75274462 MsG0880046594.01.T01:intron 60.0%
CGGACGCACCGTTGCTCCAA+TGG + Chr8:75270332-75270351 None:intergenic 65.0%
CTGCCTGCTACTGCCTGCAG+TGG + Chr8:75271377-75271396 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 75270248 75276037 75270248 ID=MsG0880046594.01;Name=MsG0880046594.01
Chr8 mRNA 75270248 75276037 75270248 ID=MsG0880046594.01.T01;Parent=MsG0880046594.01;Name=MsG0880046594.01.T01;_AED=0.39;_eAED=0.41;_QI=0|0.6|0.45|1|0.9|0.81|11|0|427
Chr8 exon 75275886 75276037 75275886 ID=MsG0880046594.01.T01:exon:31544;Parent=MsG0880046594.01.T01
Chr8 exon 75275748 75275792 75275748 ID=MsG0880046594.01.T01:exon:31543;Parent=MsG0880046594.01.T01
Chr8 exon 75275564 75275649 75275564 ID=MsG0880046594.01.T01:exon:31542;Parent=MsG0880046594.01.T01
Chr8 exon 75275053 75275105 75275053 ID=MsG0880046594.01.T01:exon:31541;Parent=MsG0880046594.01.T01
Chr8 exon 75274843 75274902 75274843 ID=MsG0880046594.01.T01:exon:31540;Parent=MsG0880046594.01.T01
Chr8 exon 75274464 75274556 75274464 ID=MsG0880046594.01.T01:exon:31539;Parent=MsG0880046594.01.T01
Chr8 exon 75273986 75274105 75273986 ID=MsG0880046594.01.T01:exon:31538;Parent=MsG0880046594.01.T01
Chr8 exon 75273372 75273529 75273372 ID=MsG0880046594.01.T01:exon:31537;Parent=MsG0880046594.01.T01
Chr8 exon 75270824 75271000 75270824 ID=MsG0880046594.01.T01:exon:31536;Parent=MsG0880046594.01.T01
Chr8 exon 75270515 75270705 75270515 ID=MsG0880046594.01.T01:exon:31535;Parent=MsG0880046594.01.T01
Chr8 exon 75270248 75270396 75270248 ID=MsG0880046594.01.T01:exon:31534;Parent=MsG0880046594.01.T01
Chr8 CDS 75275886 75276037 75275886 ID=MsG0880046594.01.T01:cds;Parent=MsG0880046594.01.T01
Chr8 CDS 75275748 75275792 75275748 ID=MsG0880046594.01.T01:cds;Parent=MsG0880046594.01.T01
Chr8 CDS 75275564 75275649 75275564 ID=MsG0880046594.01.T01:cds;Parent=MsG0880046594.01.T01
Chr8 CDS 75275053 75275105 75275053 ID=MsG0880046594.01.T01:cds;Parent=MsG0880046594.01.T01
Chr8 CDS 75274843 75274902 75274843 ID=MsG0880046594.01.T01:cds;Parent=MsG0880046594.01.T01
Chr8 CDS 75274464 75274556 75274464 ID=MsG0880046594.01.T01:cds;Parent=MsG0880046594.01.T01
Chr8 CDS 75273986 75274105 75273986 ID=MsG0880046594.01.T01:cds;Parent=MsG0880046594.01.T01
Chr8 CDS 75273372 75273529 75273372 ID=MsG0880046594.01.T01:cds;Parent=MsG0880046594.01.T01
Chr8 CDS 75270824 75271000 75270824 ID=MsG0880046594.01.T01:cds;Parent=MsG0880046594.01.T01
Chr8 CDS 75270515 75270705 75270515 ID=MsG0880046594.01.T01:cds;Parent=MsG0880046594.01.T01
Chr8 CDS 75270248 75270396 75270248 ID=MsG0880046594.01.T01:cds;Parent=MsG0880046594.01.T01
Gene Sequence

>MsG0880046594.01.T01

ATGATTTGTGTGGTTTTTGGGACCTCAGAAAATGGGGAAGCTAGGAGAATTGTTTGTGTAACTTCTGGCGGTACCACTGCTCCATTGGAGCAACGGTGCGTCCGCTATGTTGACAACTTCAGTTCAGGTCATAGAGGGGCCACATCCACCGAGTACTTTCTGAAGGCTGGATATGCTGTTATCTTTCTGTACCGTAGGGGAAGTTTCCAGCCATTTTGCAGATCCCTTCCTGAGGATCCCTTACTTGAATGCTTCGAGCCCACCAACGACTTAAACATTCAAGTTCGGAAGGATTATTCTGAAGCAGTGAAGAGTGCTATCGTGGAACATCATACTGCAGTAGCAGGCAGTCACTTGTTAAAACTTCCTTTCAGCACCATATTTGAATATCTTCAGATAATTGGAATGTCAACGAGGTGTATTGGCCCACGTGCAATGTTTTATCTTGCTGCTGCAGTATCTGACTACTATGTTCCTTGGAAGGATATGGTGGAGCACAAAATTCAGTCAGGAACTCACCTCTTGGACGTAAAGCTTGTTCAAGTGCCAAAAATGTTGTCAGTGCTTAGGAAAGATTGGGCTCCTCTGGCATTCTGCGTATCTTTCAAGTTGGAGACAGATTCAAGCATTCTTCTAAATAAGGCAAATGCAGCTCTTGAAAAGTACAACATGCATGCCGTTGTTGCAAATGAACTCTCAACTCGGAAGGAGCAAGTGGTGGTCACCACTGGTGTTGAGAAGATTACTGTTCGGCGAGACAATAGTGAGAGTGAGAGGTTTAGCAAGATTGTCAGTGGAGCTGCTGGTATAAGCTACAGAAGGAAAGAGTTTGTCAAAATCATGCCGAATTACGTCCAACATGGCGGCCTTAGATCCTATGGGGTGGATGCAGAGCTAGCTAACAAAACAGGAAGCAATTTGGCTGCTGAAAAACTTGTTGAGAAGGAACTAGAGATTGATCAAGAAGAAGTTGGAACCGATCCTAATGGGACAGAATTTGTCATTGCAACAAAGGATTCGCCGGAACTAGATGCTTCGTCTCTGGTAATTGGAAGGGTGGTAGGAGGAATGGAGGTTGTACAGAAGATTAGTCAGGTAAAAACTGTACAAGAGAACACGAGCTCTCCATATTTAGTTGAACCCTGTTTATTAATCATTGTATTTATATTGTTATATAACAGGGTGGCGAAGCTTATAGGAGACAAGAGGGCTGTTGTTGCAGAAAGAGGATTCAACCGCCCTTATTCCAAAGTTGTCATTACAAACTGTGGTGTAATACAGTAG
Protein sequence

>MsG0880046594.01.T01

MICVVFGTSENGEARRIVCVTSGGTTAPLEQRCVRYVDNFSSGHRGATSTEYFLKAGYAVIFLYRRGSFQPFCRSLPEDPLLECFEPTNDLNIQVRKDYSEAVKSAIVEHHTAVAGSHLLKLPFSTIFEYLQIIGMSTRCIGPRAMFYLAAAVSDYYVPWKDMVEHKIQSGTHLLDVKLVQVPKMLSVLRKDWAPLAFCVSFKLETDSSILLNKANAALEKYNMHAVVANELSTRKEQVVVTTGVEKITVRRDNSESERFSKIVSGAAGISYRRKEFVKIMPNYVQHGGLRSYGVDAELANKTGSNLAAEKLVEKELEIDQEEVGTDPNGTEFVIATKDSPELDASSLVIGRVVGGMEVVQKISQVKTVQENTSSPYLVEPCLLIIVFILLYNRVAKLIGDKRAVVAERGFNRPYSKVVITNCGVIQ*