AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031790.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031790.01.T01 MTR_6g033235 64.953 214 26 3 85 254 578 786 5.04e-79 262
MsG0680031790.01.T01 MTR_6g033235 56.667 150 11 2 13 108 274 423 1.37e-39 151
MsG0680031790.01.T01 MTR_6g033235 89.091 55 6 0 245 299 884 938 1.31e-25 109
MsG0680031790.01.T01 MTR_7g084170 34.054 185 72 5 110 254 643 817 1.67e-18 88.2
MsG0680031790.01.T01 MTR_7g084170 64.286 56 16 3 245 299 908 960 2.75e-13 72.0
MsG0680031790.01.T01 MTR_7g084170 34.054 185 72 5 110 254 641 815 1.85e-18 88.2
MsG0680031790.01.T01 MTR_7g084170 64.286 56 16 3 245 299 906 958 2.79e-13 72.0
MsG0680031790.01.T01 MTR_6g033240 77.966 59 12 1 338 396 1 58 7.82e-17 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 103 sgRNAs with CRISPR-Local

Find 418 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTGGAAGGCCGTATTTA+AGG 0.196732 6:+26869234 MsG0680031790.01.T01:CDS
GCATCTATTCCGTACGTTCT+TGG 0.213413 6:-26869058 None:intergenic
AAGAGCTTAGGTTTCAAAAT+TGG 0.215878 6:-26871006 None:intergenic
GAAGGAGTGCCTTTCACTTC+TGG 0.224934 6:+26868209 MsG0680031790.01.T01:CDS
TTCAGATGGCATGCACATTA+AGG 0.257584 6:+26865845 MsG0680031790.01.T01:CDS
TTTGAAACCTAAGCTCTTCA+TGG 0.297527 6:+26871011 MsG0680031790.01.T01:CDS
TCATGTAATGCAGGAGGATT+TGG 0.303229 6:-26869210 None:intergenic
ACTACCACAAACTCGGATAT+TGG 0.317235 6:-26867465 None:intergenic
GAATAGATGCAGGCACTTCC+AGG 0.318438 6:+26869071 MsG0680031790.01.T01:CDS
GAGTACTTTGTCTCCTTGCT+TGG 0.346393 6:-26865880 None:intergenic
TTTGGCAGGGTGTTTGATAA+AGG 0.350138 6:+26865786 MsG0680031790.01.T01:CDS
GGCACTATGAAAGGTAAATC+TGG 0.363268 6:+26865807 MsG0680031790.01.T01:CDS
AGTACTTTGTCTCCTTGCTT+GGG 0.378567 6:-26865879 None:intergenic
TCACTTCTGGAAGTGCTGTC+TGG 0.391259 6:+26868222 MsG0680031790.01.T01:CDS
TCAGTAGCTCTCCTCTGCCC+TGG 0.395081 6:-26868631 None:intergenic
TCCTGCATTACATGATCCTT+TGG 0.401332 6:+26869218 MsG0680031790.01.T01:CDS
CCATATCCACAGGAACAAAA+AGG 0.401925 6:+26868508 MsG0680031790.01.T01:intron
TCATAACGTTGTTTGAAGTC+TGG 0.404519 6:-26868546 None:intergenic
CGGTTCCATGGCCTTAAATA+CGG 0.406821 6:-26869245 None:intergenic
ACGTTCTTGGTGCAAGAAAC+TGG 0.412891 6:-26869045 None:intergenic
TTTGTATCTGTCTCTGCATC+CGG 0.419138 6:-26867392 None:intergenic
TCAGATGGCATGCACATTAA+GGG 0.425990 6:+26865846 MsG0680031790.01.T01:CDS
AGGTGCCACCGTCTCACGTC+CGG 0.429679 6:-26869143 None:intergenic
TGGGGTAGAACGTCCATTAC+CGG 0.432450 6:-26869265 None:intergenic
CAGTAGCTCTCCTCTGCCCT+GGG 0.435401 6:-26868630 None:intergenic
TAAGGCCATGGAACCGGTAA+TGG 0.448799 6:+26869252 MsG0680031790.01.T01:CDS
ATATTCTCCGACATACTTTG+TGG 0.455292 6:-26868664 None:intergenic
CGTATTTAAGGCCATGGAAC+CGG 0.461689 6:+26869246 MsG0680031790.01.T01:CDS
AGCGTAACATTCATTTATTG+AGG 0.467322 6:+26865904 MsG0680031790.01.T01:CDS
AATTTGATGCTTACTTCAGA+TGG 0.469739 6:+26865831 MsG0680031790.01.T01:CDS
GCCTGTGATAACCCACTAGC+TGG 0.470207 6:-26868299 None:intergenic
ACCTAAGCTCTTCATGGCAT+TGG 0.470712 6:+26871017 MsG0680031790.01.T01:CDS
CTTGCAAATGCCGCTGACAT+TGG 0.470759 6:+26868606 MsG0680031790.01.T01:CDS
GCCAATGCCATGAAGAGCTT+AGG 0.473739 6:-26871018 None:intergenic
CATTCATTAGATTACTTCCC+CGG 0.476123 6:+26869124 MsG0680031790.01.T01:CDS
AGATGCAATCAGGAATGCTT+TGG 0.482683 6:+26867416 MsG0680031790.01.T01:CDS
AGATACAAAGAGATGCAATC+AGG 0.482707 6:+26867406 MsG0680031790.01.T01:CDS
TAAGTACCTTCCAACTGCAT+TGG 0.487376 6:-26868692 None:intergenic
GGTGCCACCGTCTCACGTCC+GGG 0.489125 6:-26869142 None:intergenic
AAATCTAATGTCTAAGATAG+AGG 0.490303 6:-26871077 None:intergenic
TCCCTGTGGCATATGCAAAC+CGG 0.498692 6:+26867373 MsG0680031790.01.T01:CDS
GAAGGCCGTATTTAAGGCCA+TGG 0.502060 6:+26869240 MsG0680031790.01.T01:CDS
ATCATCCATGACATGTCATC+AGG 0.502440 6:-26869178 None:intergenic
AATATTCATTCCAATGCAGT+TGG 0.503166 6:+26868682 MsG0680031790.01.T01:CDS
AAAATACATGTCATGTATCA+AGG 0.503429 6:+26865931 MsG0680031790.01.T01:CDS
CAATGTCAGCGGCATTTGCA+AGG 0.510941 6:-26868605 None:intergenic
ATCCGGTTTGCATATGCCAC+AGG 0.512553 6:-26867375 None:intergenic
TTGAAGTCTGGAAATCCAAC+GGG 0.513897 6:-26868534 None:intergenic
TGACATTGGACCCAGGGCAG+AGG 0.515669 6:+26868620 MsG0680031790.01.T01:CDS
TATTCCTGCCGCATTACCAC+AGG 0.519376 6:+26869096 MsG0680031790.01.T01:CDS
TGCAATCAGGAATGCTTTGG+TGG 0.521655 6:+26867419 MsG0680031790.01.T01:CDS
TCCAAAGGATCATGTAATGC+AGG 0.522328 6:-26869219 None:intergenic
CAGGATGTTTCTACGGATGA+AGG 0.524063 6:+26868191 MsG0680031790.01.T01:CDS
TTTGATAAAGGCACTATGAA+AGG 0.527482 6:+26865798 MsG0680031790.01.T01:CDS
TCATCAGGCACCAGTGCACT+AGG 0.528004 6:-26869163 None:intergenic
AACGTCCATTACCGGTTCCA+TGG 0.533077 6:-26869257 None:intergenic
ACTTCAAACAACGTTATGAC+GGG 0.539620 6:+26868550 MsG0680031790.01.T01:CDS
GCGTAACATTCATTTATTGA+GGG 0.540221 6:+26865905 MsG0680031790.01.T01:CDS
GAGCACTCAGGATGTTTCTA+CGG 0.547336 6:+26868184 MsG0680031790.01.T01:CDS
TTCATTCCAATGCAGTTGGA+AGG 0.560779 6:+26868686 MsG0680031790.01.T01:CDS
ATGCCGCTGACATTGGACCC+AGG 0.561240 6:+26868613 MsG0680031790.01.T01:CDS
TTTGAAGTCTGGAAATCCAA+CGG 0.563268 6:-26868535 None:intergenic
GCATTACATGATCCTTTGGA+AGG 0.564703 6:+26869222 MsG0680031790.01.T01:CDS
GACGGTGGCACCTAGTGCAC+TGG 0.566162 6:+26869153 MsG0680031790.01.T01:CDS
GACTTCAAACAACGTTATGA+CGG 0.579071 6:+26868549 MsG0680031790.01.T01:CDS
TGCCGCTGACATTGGACCCA+GGG 0.579608 6:+26868614 MsG0680031790.01.T01:CDS
TTACTTCCCCGGACGTGAGA+CGG 0.579947 6:+26869135 MsG0680031790.01.T01:CDS
CCCAGCTAGTGGGTTATCAC+AGG 0.586431 6:+26868298 MsG0680031790.01.T01:CDS
TTGATCTTCATTGACTTGAG+AGG 0.586711 6:-26868324 None:intergenic
TTTCTTGCACCAAGAACGTA+CGG 0.587459 6:+26869049 MsG0680031790.01.T01:CDS
AATAGATGCAGGCACTTCCA+GGG 0.593801 6:+26869072 MsG0680031790.01.T01:CDS
CCTTAAATACGGCCTTCCAA+AGG 0.594564 6:-26869234 None:intergenic
GAAGCCTGTGGTAATGCGGC+AGG 0.596125 6:-26869100 None:intergenic
AGAACGTACGGAATAGATGC+AGG 0.596214 6:+26869061 MsG0680031790.01.T01:CDS
ACTCGCAAACACCCAGCTAG+TGG 0.597244 6:+26868287 MsG0680031790.01.T01:CDS
TGGTGCCTGATGACATGTCA+TGG 0.601874 6:+26869173 MsG0680031790.01.T01:CDS
CCTGTGATAACCCACTAGCT+GGG 0.606523 6:-26868298 None:intergenic
TTTCATGCCACAAAGTATGT+CGG 0.613644 6:+26868657 MsG0680031790.01.T01:CDS
ACTAACAAAATGCTACCACA+TGG 0.614343 6:-26869285 None:intergenic
CTAACAAAATGCTACCACAT+GGG 0.617164 6:-26869284 None:intergenic
AGGGCAGAGGAGAGCTACTG+AGG 0.619226 6:+26868633 MsG0680031790.01.T01:CDS
CTCGCAAACACCCAGCTAGT+GGG 0.620190 6:+26868288 MsG0680031790.01.T01:CDS
GTGCCACCGTCTCACGTCCG+GGG 0.620864 6:-26869141 None:intergenic
AATGTCAGCGGCATTTGCAA+GGG 0.622269 6:-26868604 None:intergenic
TGCCCTGGGTCCAATGTCAG+CGG 0.623826 6:-26868616 None:intergenic
TCCGGTTTGCATATGCCACA+GGG 0.628118 6:-26867374 None:intergenic
TGATTTGTGTCAAGAAGAGA+CGG 0.641692 6:+26868376 MsG0680031790.01.T01:CDS
TAACAAAATGCTACCACATG+GGG 0.643592 6:-26869283 None:intergenic
GCTGAGTCATAGTATGAATG+TGG 0.647022 6:-26868260 None:intergenic
CTTCAAACAACGTTATGACG+GGG 0.648411 6:+26868551 MsG0680031790.01.T01:CDS
ATCCAGGAATATGAGCACTC+AGG 0.648768 6:+26868172 MsG0680031790.01.T01:intron
ACAGCACTTCCAGAAGTGAA+AGG 0.648965 6:-26868218 None:intergenic
AAAGGATCATGTAATGCAGG+AGG 0.659977 6:-26869216 None:intergenic
GTGTGAAATGACCAGAACAT+TGG 0.664234 6:-26868579 None:intergenic
TAATGCGGCAGGAATAACCC+TGG 0.673403 6:-26869089 None:intergenic
CTTCCCCGGACGTGAGACGG+TGG 0.683102 6:+26869138 MsG0680031790.01.T01:CDS
GATGGCATGCACATTAAGGG+AGG 0.686660 6:+26865849 MsG0680031790.01.T01:CDS
TTCAAACAACGTTATGACGG+GGG 0.703638 6:+26868552 MsG0680031790.01.T01:CDS
TCTAATGAATGTGAAGCCTG+TGG 0.711829 6:-26869112 None:intergenic
ATGTGAAGCCTGTGGTAATG+CGG 0.720147 6:-26869104 None:intergenic
AATGGACGTTCTACCCCATG+TGG 0.727456 6:+26869270 MsG0680031790.01.T01:CDS
GGTTTGCATATGCCACAGGG+AGG 0.753976 6:-26867371 None:intergenic
GGTGCTGAAAGACCTCCCTG+TGG 0.805689 6:+26867359 MsG0680031790.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAATTGAAACTT+TGG + Chr6:26870132-26870151 MsG0680031790.01.T01:intron 10.0%
!! AAAGTATAAGATTTAATTAT+AGG + Chr6:26866567-26866586 MsG0680031790.01.T01:intron 10.0%
!! AAGATTTATATGATTATAAA+TGG - Chr6:26866537-26866556 None:intergenic 10.0%
!! TTTATTCAATTTATATTTGT+TGG - Chr6:26869704-26869723 None:intergenic 10.0%
!!! AAAGTTTCAATTTTTTTTTT+TGG - Chr6:26870133-26870152 None:intergenic 10.0%
!!! TTAATTCATATTTCAATTTT+TGG + Chr6:26870869-26870888 MsG0680031790.01.T01:intron 10.0%
!! ATATAAATTCATATATGTAG+TGG - Chr6:26866155-26866174 None:intergenic 15.0%
!! ATTATATGTAAATGTAGTAA+AGG - Chr6:26870827-26870846 None:intergenic 15.0%
!! TAATTAAATCTTATACTTTC+AGG - Chr6:26866566-26866585 None:intergenic 15.0%
!! TTAGTATAATATACAAGATT+CGG - Chr6:26870209-26870228 None:intergenic 15.0%
!! TTGTATATTATACTAAATTG+AGG + Chr6:26870213-26870232 MsG0680031790.01.T01:intron 15.0%
!!! AAAATATTAAGAATTTTGTG+TGG - Chr6:26866989-26867008 None:intergenic 15.0%
!!! AGAATGTATTTTATTTTTGT+AGG + Chr6:26867328-26867347 MsG0680031790.01.T01:intron 15.0%
!!! ATAAATAATTGTACAGTTTT+AGG + Chr6:26870354-26870373 MsG0680031790.01.T01:intron 15.0%
!!! ATTGTTTTATCAAAATCTAA+TGG - Chr6:26866872-26866891 None:intergenic 15.0%
!!! GAATATTGTTTTATCAAAAT+CGG + Chr6:26868122-26868141 MsG0680031790.01.T01:intron 15.0%
!!! TATTATACTTTTTTTTTTGC+CGG + Chr6:26870173-26870192 MsG0680031790.01.T01:intron 15.0%
!!! TTAATTTGATACAAAATACT+CGG - Chr6:26866604-26866623 None:intergenic 15.0%
!! ATATCGATACAAGAAAATTA+TGG + Chr6:26870318-26870337 MsG0680031790.01.T01:intron 20.0%
!! CTCAATCTAAAAAATTATGA+AGG - Chr6:26867507-26867526 None:intergenic 20.0%
!! TAATTTGATACAAAATACTC+GGG - Chr6:26866603-26866622 None:intergenic 20.0%
!! TAGTATAATATACAAGATTC+GGG - Chr6:26870208-26870227 None:intergenic 20.0%
!! TATGAATTAATGAGTTCTTA+AGG - Chr6:26870859-26870878 None:intergenic 20.0%
!! TATGTAAATGAATTATGTTG+CGG - Chr6:26870421-26870440 None:intergenic 20.0%
!! TTCTTGTAATTAAAATGAGA+TGG - Chr6:26869829-26869848 None:intergenic 20.0%
!!! AAAATGTTTCATTTTTACGA+TGG + Chr6:26866818-26866837 MsG0680031790.01.T01:intron 20.0%
!!! ACTGTTCTTGAAATAATTTT+TGG + Chr6:26865768-26865787 MsG0680031790.01.T01:CDS 20.0%
!!! ATTATACTTTTTTTTTTGCC+GGG + Chr6:26870174-26870193 MsG0680031790.01.T01:intron 20.0%
!!! GAGACATTCTTTAATAATTT+TGG + Chr6:26869523-26869542 MsG0680031790.01.T01:intron 20.0%
!!! GGCAAAAAAAAAAGTATAAT+AGG - Chr6:26870174-26870193 None:intergenic 20.0%
!!! TATTTATTTTTCCTTGTTTC+TGG + Chr6:26869501-26869520 MsG0680031790.01.T01:intron 20.0%
!!! TCAATTTTTTTTTTTGGTTG+TGG - Chr6:26870127-26870146 None:intergenic 20.0%
!!! TTATTTTATGTGTAATGTTG+TGG + Chr6:26870647-26870666 MsG0680031790.01.T01:intron 20.0%
!!! TTTATTTTGTCTCAAAATAG+AGG - Chr6:26869575-26869594 None:intergenic 20.0%
! AAAATACATGTCATGTATCA+AGG + Chr6:26865931-26865950 MsG0680031790.01.T01:CDS 25.0%
! AATAGTCAATTCTCAATAAG+TGG + Chr6:26866055-26866074 MsG0680031790.01.T01:intron 25.0%
! AATTTGATACAAAATACTCG+GGG - Chr6:26866602-26866621 None:intergenic 25.0%
! ACTTTATTGACATTGTACAT+AGG + Chr6:26869866-26869885 MsG0680031790.01.T01:intron 25.0%
! AGAATCCTACAAAAAAAGTT+TGG + Chr6:26870930-26870949 MsG0680031790.01.T01:CDS 25.0%
! AGTATAATATACAAGATTCG+GGG - Chr6:26870207-26870226 None:intergenic 25.0%
! ATAGTTTCATATACGTTTGA+TGG - Chr6:26870508-26870527 None:intergenic 25.0%
! ATATTAAGTTAGACTTTAGC+TGG + Chr6:26866100-26866119 MsG0680031790.01.T01:intron 25.0%
! ATCAACTTAGCATAAAAAGA+TGG - Chr6:26867263-26867282 None:intergenic 25.0%
! ATTGAAGAGAGAATGAATTA+AGG - Chr6:26868473-26868492 None:intergenic 25.0%
! GAAACTTGAATGAAATAAAG+TGG - Chr6:26870798-26870817 None:intergenic 25.0%
! GACAATGCATAATATATTCA+AGG + Chr6:26870082-26870101 MsG0680031790.01.T01:intron 25.0%
! GTAAAACGACTAATAATACT+GGG + Chr6:26869996-26870015 MsG0680031790.01.T01:intron 25.0%
! TAATTAAAATGAGATGGCTA+AGG - Chr6:26869823-26869842 None:intergenic 25.0%
! TACTAATCTGATATGCATTA+AGG - Chr6:26867071-26867090 None:intergenic 25.0%
! TCAAATTATAATTGTGCTTC+AGG + Chr6:26867623-26867642 MsG0680031790.01.T01:intron 25.0%
! TGAATCCATATAAATCTACT+AGG - Chr6:26866913-26866932 None:intergenic 25.0%
! TGTAAAACGACTAATAATAC+TGG + Chr6:26869995-26870014 MsG0680031790.01.T01:intron 25.0%
! TTAATGCATATCAGATTAGT+AGG + Chr6:26867070-26867089 MsG0680031790.01.T01:intron 25.0%
! TTAATTCATTCTCTCTTCAA+TGG + Chr6:26868472-26868491 MsG0680031790.01.T01:intron 25.0%
! TTCTTCCTAGTAGATTTATA+TGG + Chr6:26866905-26866924 MsG0680031790.01.T01:intron 25.0%
! TTGATAAAGTTGTTCCTTAA+TGG - Chr6:26866491-26866510 None:intergenic 25.0%
!! ATTTTATATCCTTTAAACCC+CGG - Chr6:26869954-26869973 None:intergenic 25.0%
!! GAAATTTTATTGGTCATCAT+TGG + Chr6:26868853-26868872 MsG0680031790.01.T01:intron 25.0%
!! GTGACAATTTTTATTAGCAA+AGG + Chr6:26869607-26869626 MsG0680031790.01.T01:intron 25.0%
!! TTGAACACAGGAAATTTTAT+TGG + Chr6:26868843-26868862 MsG0680031790.01.T01:intron 25.0%
!!! TCTTGAAATAATTTTTGGCA+GGG + Chr6:26865773-26865792 MsG0680031790.01.T01:CDS 25.0%
!!! TTATACTTTTTTTTTTGCCG+GGG + Chr6:26870175-26870194 MsG0680031790.01.T01:intron 25.0%
!!! TTATTTTTGTAGGTTGCAAT+TGG + Chr6:26867338-26867357 MsG0680031790.01.T01:intron 25.0%
!!! TTCTTCCAAACTTTTTTTGT+AGG - Chr6:26870938-26870957 None:intergenic 25.0%
!!! TTCTTGAAATAATTTTTGGC+AGG + Chr6:26865772-26865791 MsG0680031790.01.T01:CDS 25.0%
!!! TTTTGGAAGTTAAGAAATTC+TGG + Chr6:26869540-26869559 MsG0680031790.01.T01:intron 25.0%
AAAAATGGCACATTCATGTT+TGG + Chr6:26870906-26870925 MsG0680031790.01.T01:CDS 30.0%
AAGAGCTTAGGTTTCAAAAT+TGG - Chr6:26871009-26871028 None:intergenic 30.0%
AATATTCATTCCAATGCAGT+TGG + Chr6:26868682-26868701 MsG0680031790.01.T01:CDS 30.0%
AATTTGATGCTTACTTCAGA+TGG + Chr6:26865831-26865850 MsG0680031790.01.T01:CDS 30.0%
ACAAACAAACACATCATGAA+TGG - Chr6:26870747-26870766 None:intergenic 30.0%
AGATAATATAATCCCAGTAG+AGG + Chr6:26867728-26867747 MsG0680031790.01.T01:intron 30.0%
AGATTGTATAACCAGAATAG+AGG - Chr6:26866775-26866794 None:intergenic 30.0%
AGCGTAACATTCATTTATTG+AGG + Chr6:26865904-26865923 MsG0680031790.01.T01:CDS 30.0%
AGGATATAATAACCCAATTG+AGG + Chr6:26867870-26867889 MsG0680031790.01.T01:intron 30.0%
ATAAATCTACTAGGAAGAAC+TGG - Chr6:26866904-26866923 None:intergenic 30.0%
ATACTCATCTTTATTCTGTG+AGG - Chr6:26868154-26868173 None:intergenic 30.0%
ATATAAATATCTCGTGTTCG+AGG - Chr6:26870302-26870321 None:intergenic 30.0%
ATTAGTGGTAGTAATTATGG+AGG + Chr6:26866029-26866048 MsG0680031790.01.T01:intron 30.0%
ATTCAGTATTCTCAGAAACA+AGG - Chr6:26865969-26865988 None:intergenic 30.0%
CCATAATTACTACCACTAAT+GGG - Chr6:26866029-26866048 None:intergenic 30.0%
CTAAGATAGAGGAAAAAAGA+AGG - Chr6:26871069-26871088 None:intergenic 30.0%
CTTCTGTAAATGTAACTGAT+GGG + Chr6:26868758-26868777 MsG0680031790.01.T01:intron 30.0%
GAACAAAGCTGAAAGAAAAA+TGG + Chr6:26870891-26870910 MsG0680031790.01.T01:intron 30.0%
GACAATGCATAATATATGCA+AGG + Chr6:26869927-26869946 MsG0680031790.01.T01:intron 30.0%
GCGTAACATTCATTTATTGA+GGG + Chr6:26865905-26865924 MsG0680031790.01.T01:CDS 30.0%
GGATTTAAGAAACAGATACA+GGG - Chr6:26867537-26867556 None:intergenic 30.0%
GTAGCAACAAAATTGATGAA+TGG + Chr6:26869648-26869667 MsG0680031790.01.T01:intron 30.0%
TATCACAGTGTAACCAATTA+CGG + Chr6:26868988-26869007 MsG0680031790.01.T01:intron 30.0%
TCCATAATTACTACCACTAA+TGG - Chr6:26866030-26866049 None:intergenic 30.0%
TGATTTCAATCAAGTGAGTA+TGG + Chr6:26868089-26868108 MsG0680031790.01.T01:intron 30.0%
TGCATAATATATTCAAGGTC+CGG + Chr6:26870087-26870106 MsG0680031790.01.T01:intron 30.0%
TGTTTATTATTATGCGACCA+AGG - Chr6:26867574-26867593 None:intergenic 30.0%
TTAGTGGTAGTAATTATGGA+GGG + Chr6:26866030-26866049 MsG0680031790.01.T01:intron 30.0%
TTCAGTATTCTCAGAAACAA+GGG - Chr6:26865968-26865987 None:intergenic 30.0%
TTCTTCGACAATACTTTGTA+TGG - Chr6:26867196-26867215 None:intergenic 30.0%
! ACGATTCTTTTTCTTTCATG+AGG + Chr6:26866960-26866979 MsG0680031790.01.T01:intron 30.0%
! AGTCTTTCAAGTCAAAATGT+TGG + Chr6:26868927-26868946 MsG0680031790.01.T01:intron 30.0%
! ATAATAGGCAAACTTGTTTG+AGG - Chr6:26870159-26870178 None:intergenic 30.0%
! CACACTTCAATATTTTGCTA+GGG + Chr6:26867029-26867048 MsG0680031790.01.T01:intron 30.0%
! CATGAGCAAAATTGACATTT+TGG + Chr6:26870029-26870048 MsG0680031790.01.T01:intron 30.0%
! CTTCATGAGTTTAGTTCAAT+TGG + Chr6:26869900-26869919 MsG0680031790.01.T01:intron 30.0%
! TGCATTATGTTTGTTGATTG+CGG + Chr6:26866436-26866455 MsG0680031790.01.T01:intron 30.0%
! TGTTTCTGAGAATACTGAAT+TGG + Chr6:26865969-26865988 MsG0680031790.01.T01:intron 30.0%
!! TTGCGGTATTGAAAGTTTTT+GGG - Chr6:26870404-26870423 None:intergenic 30.0%
!! TTTGATAAAGGCACTATGAA+AGG + Chr6:26865798-26865817 MsG0680031790.01.T01:CDS 30.0%
!!! TTTTTTTTTTGGTTGTGGCT+GGG - Chr6:26870122-26870141 None:intergenic 30.0%
!!! TTTTTTTTTTTGGTTGTGGC+TGG - Chr6:26870123-26870142 None:intergenic 30.0%
AAAAGAAGTTGCATGAGCAT+TGG + Chr6:26867219-26867238 MsG0680031790.01.T01:intron 35.0%
AAACAGTATAGTGGCTGTAA+TGG + Chr6:26865999-26866018 MsG0680031790.01.T01:intron 35.0%
AAAGAATGTCTCCAGAAACA+AGG - Chr6:26869515-26869534 None:intergenic 35.0%
AAAGGAATGAAACCAAGGAA+GGG + Chr6:26869416-26869435 MsG0680031790.01.T01:intron 35.0%
AACAAACATACATGGAGATG+AGG - Chr6:26866382-26866401 None:intergenic 35.0%
AAGAAACACTACCACAAACT+CGG - Chr6:26867475-26867494 None:intergenic 35.0%
AAGAAAGATCCTTAGAAGCT+GGG + Chr6:26869309-26869328 MsG0680031790.01.T01:intron 35.0%
ACACAAACCTTCTCATCTAA+GGG - Chr6:26869343-26869362 None:intergenic 35.0%
ACTAACAAAATGCTACCACA+TGG - Chr6:26869288-26869307 None:intergenic 35.0%
ACTTCAAACAACGTTATGAC+GGG + Chr6:26868550-26868569 MsG0680031790.01.T01:CDS 35.0%
AGAAAGAATTATGTGAGGAC+GGG - Chr6:26868056-26868075 None:intergenic 35.0%
AGATACAAAGAGATGCAATC+AGG + Chr6:26867406-26867425 MsG0680031790.01.T01:CDS 35.0%
AGATATGTACATGGTGTAAC+TGG - Chr6:26869377-26869396 None:intergenic 35.0%
AGTCTACTTGAAAGATTACG+AGG + Chr6:26868005-26868024 MsG0680031790.01.T01:intron 35.0%
ATACAATCTGCTTCAAGATG+AGG + Chr6:26866786-26866805 MsG0680031790.01.T01:intron 35.0%
ATATTCTCCGACATACTTTG+TGG - Chr6:26868667-26868686 None:intergenic 35.0%
ATCTCCATCTAGATGTTAGA+TGG + Chr6:26869393-26869412 MsG0680031790.01.T01:intron 35.0%
ATTACGAGGATTCTGTTGTT+AGG + Chr6:26868019-26868038 MsG0680031790.01.T01:intron 35.0%
ATTAGATTCTTGCTTTGTGG+TGG - Chr6:26870718-26870737 None:intergenic 35.0%
ATTCATGTAACCACATAGCT+AGG + Chr6:26866928-26866947 MsG0680031790.01.T01:intron 35.0%
ATTGAAATCATTGTCACAGC+TGG - Chr6:26868079-26868098 None:intergenic 35.0%
CAAACACATCATGAATGGAA+TGG - Chr6:26870742-26870761 None:intergenic 35.0%
CAGAATAAAGATGAGTATCC+AGG + Chr6:26868156-26868175 MsG0680031790.01.T01:intron 35.0%
CATAATATATTCAAGGTCCG+GGG + Chr6:26870089-26870108 MsG0680031790.01.T01:intron 35.0%
CATCTAGATGTTAGATGGAA+AGG + Chr6:26869398-26869417 MsG0680031790.01.T01:intron 35.0%
CATTCATTAGATTACTTCCC+CGG + Chr6:26869124-26869143 MsG0680031790.01.T01:CDS 35.0%
CCCATTAGTGGTAGTAATTA+TGG + Chr6:26866026-26866045 MsG0680031790.01.T01:intron 35.0%
CTAACAAAATGCTACCACAT+GGG - Chr6:26869287-26869306 None:intergenic 35.0%
CTTCAATCTGATCCTCAATT+GGG - Chr6:26867885-26867904 None:intergenic 35.0%
CTTTCCATCTAACATCTAGA+TGG - Chr6:26869400-26869419 None:intergenic 35.0%
GACTTCAAACAACGTTATGA+CGG + Chr6:26868549-26868568 MsG0680031790.01.T01:CDS 35.0%
GAGAAAGAATTATGTGAGGA+CGG - Chr6:26868057-26868076 None:intergenic 35.0%
GCATAATATATTCAAGGTCC+GGG + Chr6:26870088-26870107 MsG0680031790.01.T01:intron 35.0%
GCTTCTGTAAATGTAACTGA+TGG + Chr6:26868757-26868776 MsG0680031790.01.T01:intron 35.0%
GGAATTAGATTCTTGCTTTG+TGG - Chr6:26870721-26870740 None:intergenic 35.0%
GGATAATATAATCCCAGTAG+AGG + Chr6:26867799-26867818 MsG0680031790.01.T01:intron 35.0%
GGGATTTAAGAAACAGATAC+AGG - Chr6:26867538-26867557 None:intergenic 35.0%
TAACAAAATGCTACCACATG+GGG - Chr6:26869286-26869305 None:intergenic 35.0%
TAAGAAAGATCCTTAGAAGC+TGG + Chr6:26869308-26869327 MsG0680031790.01.T01:intron 35.0%
TACACAAACCTTCTCATCTA+AGG - Chr6:26869344-26869363 None:intergenic 35.0%
TATAATTGTGCTTCAGGAAG+AGG + Chr6:26867629-26867648 MsG0680031790.01.T01:intron 35.0%
TCAGTATTCTCAGAAACAAG+GGG - Chr6:26865967-26865986 None:intergenic 35.0%
TCTAGATGGAGATATGTACA+TGG - Chr6:26869386-26869405 None:intergenic 35.0%
TCTTCAATCTGATCCTCAAT+TGG - Chr6:26867886-26867905 None:intergenic 35.0%
TGCATAATATATGCAAGGTC+CGG + Chr6:26869932-26869951 MsG0680031790.01.T01:intron 35.0%
TGGAAGTTAAGAAATTCTGG+AGG + Chr6:26869543-26869562 MsG0680031790.01.T01:intron 35.0%
TTAAACTACCACTAGCGTAT+TGG - Chr6:26870595-26870614 None:intergenic 35.0%
TTACGAGGATTCTGTTGTTA+GGG + Chr6:26868020-26868039 MsG0680031790.01.T01:intron 35.0%
TTCATGTAACCACATAGCTA+GGG + Chr6:26866929-26866948 MsG0680031790.01.T01:intron 35.0%
TTTCATGCCACAAAGTATGT+CGG + Chr6:26868657-26868676 MsG0680031790.01.T01:CDS 35.0%
! GCACACTTCAATATTTTGCT+AGG + Chr6:26867028-26867047 MsG0680031790.01.T01:intron 35.0%
! TCATAACGTTGTTTGAAGTC+TGG - Chr6:26868549-26868568 None:intergenic 35.0%
! TGAGTTTAGTTCAATTGGCA+AGG + Chr6:26869905-26869924 MsG0680031790.01.T01:intron 35.0%
! TGATTTGTGTCAAGAAGAGA+CGG + Chr6:26868376-26868395 MsG0680031790.01.T01:CDS 35.0%
! TTGGCTTTCGTAAGAACTAA+AGG - Chr6:26868440-26868459 None:intergenic 35.0%
! TTTGAAACCTAAGCTCTTCA+TGG + Chr6:26871011-26871030 MsG0680031790.01.T01:CDS 35.0%
! TTTGAAGTCTGGAAATCCAA+CGG - Chr6:26868538-26868557 None:intergenic 35.0%
!! AAAAAGTGTTCGAGGTGTAA+TGG - Chr6:26870266-26870285 None:intergenic 35.0%
!! GTTGCGGTATTGAAAGTTTT+TGG - Chr6:26870405-26870424 None:intergenic 35.0%
!! TCCTTTCAAAAAAGTGTTCG+AGG - Chr6:26870274-26870293 None:intergenic 35.0%
!! TGTAATGGATATCCCATTAG+TGG + Chr6:26866014-26866033 MsG0680031790.01.T01:intron 35.0%
!! TTGATCTTCATTGACTTGAG+AGG - Chr6:26868327-26868346 None:intergenic 35.0%
!!! ACCTCGAACACTTTTTTGAA+AGG + Chr6:26870270-26870289 MsG0680031790.01.T01:intron 35.0%
AAAGGATCATGTAATGCAGG+AGG - Chr6:26869219-26869238 None:intergenic 40.0%
AACTCCAATATCCGAGTTTG+TGG + Chr6:26867461-26867480 MsG0680031790.01.T01:intron 40.0%
AAGCCAATGAATCTTGCCTT+GGG - Chr6:26868741-26868760 None:intergenic 40.0%
AAGGAATGAAACCAAGGAAG+GGG + Chr6:26869417-26869436 MsG0680031790.01.T01:intron 40.0%
AATCTTGCCTTGGGATGAAT+GGG - Chr6:26868732-26868751 None:intergenic 40.0%
ACTACCACAAACTCGGATAT+TGG - Chr6:26867468-26867487 None:intergenic 40.0%
ACTGGATCATAAGAACTACC+GGG - Chr6:26869014-26869033 None:intergenic 40.0%
AGAATGAAGATGTGAGCTCA+GGG + Chr6:26867825-26867844 MsG0680031790.01.T01:intron 40.0%
AGACTGAAACACGAGAACAA+AGG - Chr6:26866348-26866367 None:intergenic 40.0%
AGATGAAGATACATGAGCTC+AGG + Chr6:26867936-26867955 MsG0680031790.01.T01:intron 40.0%
AGATGCAATCAGGAATGCTT+TGG + Chr6:26867416-26867435 MsG0680031790.01.T01:CDS 40.0%
AGATTGAAGATGTGAGCTCA+GGG + Chr6:26867896-26867915 MsG0680031790.01.T01:intron 40.0%
AGTACTTTGTCTCCTTGCTT+GGG - Chr6:26865882-26865901 None:intergenic 40.0%
ATACGTACCCTTAGATGAGA+AGG + Chr6:26869333-26869352 MsG0680031790.01.T01:intron 40.0%
ATCATCCATGACATGTCATC+AGG - Chr6:26869181-26869200 None:intergenic 40.0%
ATTATTATGCGACCAAGGCA+AGG - Chr6:26867569-26867588 None:intergenic 40.0%
ATTCTCTCTTCAATGGAGAG+GGG + Chr6:26868479-26868498 MsG0680031790.01.T01:intron 40.0%
CACGGTTAAGAGACTTAGAT+TGG - Chr6:26867143-26867162 None:intergenic 40.0%
CAGTATTCTCAGAAACAAGG+GGG - Chr6:26865966-26865985 None:intergenic 40.0%
CAGTGCAATGTTAACAACAC+AGG - Chr6:26866222-26866241 None:intergenic 40.0%
CATAATATATGCAAGGTCCG+GGG + Chr6:26869934-26869953 MsG0680031790.01.T01:intron 40.0%
CATTCTCTCTTCAATGGAGA+GGG + Chr6:26868478-26868497 MsG0680031790.01.T01:intron 40.0%
CCATATCCACAGGAACAAAA+AGG + Chr6:26868508-26868527 MsG0680031790.01.T01:intron 40.0%
CGAACTTCAGGATCAAGAAA+AGG + Chr6:26867850-26867869 MsG0680031790.01.T01:intron 40.0%
CGAACTTCATGATCAAGATG+AGG + Chr6:26867778-26867797 MsG0680031790.01.T01:intron 40.0%
CTAAGTCTCTTAACCGTGTT+GGG + Chr6:26867145-26867164 MsG0680031790.01.T01:intron 40.0%
CTATCTCACTAGCATTTCTG+AGG + Chr6:26866740-26866759 MsG0680031790.01.T01:intron 40.0%
CTCCTGAAAACACTCTAGTT+CGG - Chr6:26866183-26866202 None:intergenic 40.0%
CTGAGAATACTGAATTGGCT+GGG + Chr6:26865974-26865993 MsG0680031790.01.T01:intron 40.0%
CTTCAAACAACGTTATGACG+GGG + Chr6:26868551-26868570 MsG0680031790.01.T01:CDS 40.0%
CTTCATTCTGATCCTCTACT+GGG - Chr6:26867814-26867833 None:intergenic 40.0%
GAAAGGAATGAAACCAAGGA+AGG + Chr6:26869415-26869434 MsG0680031790.01.T01:intron 40.0%
GAAGAGGATAATGTGAGCTT+GGG + Chr6:26867645-26867664 MsG0680031790.01.T01:intron 40.0%
GACTGGATCATAAGAACTAC+CGG - Chr6:26869015-26869034 None:intergenic 40.0%
GATGAAGATACATGAGCTCA+GGG + Chr6:26867937-26867956 MsG0680031790.01.T01:intron 40.0%
GATGGAAAGGAATGAAACCA+AGG + Chr6:26869411-26869430 MsG0680031790.01.T01:intron 40.0%
GCATAATATATGCAAGGTCC+GGG + Chr6:26869933-26869952 MsG0680031790.01.T01:intron 40.0%
GCATTACATGATCCTTTGGA+AGG + Chr6:26869222-26869241 MsG0680031790.01.T01:CDS 40.0%
GCTGAGTCATAGTATGAATG+TGG - Chr6:26868263-26868282 None:intergenic 40.0%
GCTGCACATGAATGTTATTG+AGG - Chr6:26867174-26867193 None:intergenic 40.0%
GCTGGAGAAAGAATTATGTG+AGG - Chr6:26868061-26868080 None:intergenic 40.0%
GCTTTCGTAAGAACTAAAGG+AGG - Chr6:26868437-26868456 None:intergenic 40.0%
GGAGACGAAACAAACATACA+TGG - Chr6:26866390-26866409 None:intergenic 40.0%
GGCACTATGAAAGGTAAATC+TGG + Chr6:26865807-26865826 MsG0680031790.01.T01:CDS 40.0%
GTACATGGTGTAACTGGTAT+AGG - Chr6:26869371-26869390 None:intergenic 40.0%
GTGTGAAATGACCAGAACAT+TGG - Chr6:26868582-26868601 None:intergenic 40.0%
TAAGTACCTTCCAACTGCAT+TGG - Chr6:26868695-26868714 None:intergenic 40.0%
TACCAACTGAGTTAAGCTCA+CGG - Chr6:26870060-26870079 None:intergenic 40.0%
TAGCAGATAGCAACACTAAG+AGG - Chr6:26866723-26866742 None:intergenic 40.0%
TCAAGTCAAAATGTTGGCAC+CGG + Chr6:26868933-26868952 MsG0680031790.01.T01:intron 40.0%
TCAGATGGCATGCACATTAA+GGG + Chr6:26865846-26865865 MsG0680031790.01.T01:CDS 40.0%
TCATCAAGACTGAGCCATTA+AGG + Chr6:26866474-26866493 MsG0680031790.01.T01:intron 40.0%
TCATGTAATGCAGGAGGATT+TGG - Chr6:26869213-26869232 None:intergenic 40.0%
TCATTCTCTCTTCAATGGAG+AGG + Chr6:26868477-26868496 MsG0680031790.01.T01:intron 40.0%
TCCAAAGGATCATGTAATGC+AGG - Chr6:26869222-26869241 None:intergenic 40.0%
TCCTGCATTACATGATCCTT+TGG + Chr6:26869218-26869237 MsG0680031790.01.T01:CDS 40.0%
TCCTGTGTTCAAGTGAGATT+GGG - Chr6:26868835-26868854 None:intergenic 40.0%
TCTAAGTCTCTTAACCGTGT+TGG + Chr6:26867144-26867163 MsG0680031790.01.T01:intron 40.0%
TCTAATGAATGTGAAGCCTG+TGG - Chr6:26869115-26869134 None:intergenic 40.0%
TCTGAGAATACTGAATTGGC+TGG + Chr6:26865973-26865992 MsG0680031790.01.T01:intron 40.0%
TCTTCATTCTGATCCTCTAC+TGG - Chr6:26867815-26867834 None:intergenic 40.0%
TGCATGGGCATTTGGATAAT+GGG + Chr6:26868410-26868429 MsG0680031790.01.T01:intron 40.0%
TGTTAACAACACAGGCTAGA+AGG - Chr6:26866214-26866233 None:intergenic 40.0%
TTAGACTTTAGCTGGCATGT+TGG + Chr6:26866108-26866127 MsG0680031790.01.T01:intron 40.0%
TTCAAACAACGTTATGACGG+GGG + Chr6:26868552-26868571 MsG0680031790.01.T01:CDS 40.0%
TTCAGATGGCATGCACATTA+AGG + Chr6:26865845-26865864 MsG0680031790.01.T01:CDS 40.0%
TTCATTCCAATGCAGTTGGA+AGG + Chr6:26868686-26868705 MsG0680031790.01.T01:CDS 40.0%
TTCCTGTGTTCAAGTGAGAT+TGG - Chr6:26868836-26868855 None:intergenic 40.0%
TTGAAAACACCCTAGCTATG+TGG - Chr6:26866941-26866960 None:intergenic 40.0%
TTGAAGTCTGGAAATCCAAC+GGG - Chr6:26868537-26868556 None:intergenic 40.0%
TTGCATGGGCATTTGGATAA+TGG + Chr6:26868409-26868428 MsG0680031790.01.T01:intron 40.0%
TTTCTTGCACCAAGAACGTA+CGG + Chr6:26869049-26869068 MsG0680031790.01.T01:CDS 40.0%
TTTGTATCTGTCTCTGCATC+CGG - Chr6:26867395-26867414 None:intergenic 40.0%
! AGTTAAGAAATTCTGGAGGC+TGG + Chr6:26869547-26869566 MsG0680031790.01.T01:intron 40.0%
! CCTTTTTGTTCCTGTGGATA+TGG - Chr6:26868511-26868530 None:intergenic 40.0%
! CTAAAATCGTGTAACTTGCG+TGG + Chr6:26866310-26866329 MsG0680031790.01.T01:intron 40.0%
! GAATTAAGGCACTTCGATCT+TGG - Chr6:26868459-26868478 None:intergenic 40.0%
! GTGGTAGTGTTTCTTTCTGA+TGG + Chr6:26867480-26867499 MsG0680031790.01.T01:intron 40.0%
! GTTAAGAGTATGAAGCAGTC+TGG + Chr6:26867108-26867127 MsG0680031790.01.T01:intron 40.0%
! TGAGCTTAACTCAGTTGGTA+AGG + Chr6:26870060-26870079 MsG0680031790.01.T01:intron 40.0%
! TTTGGCAGGGTGTTTGATAA+AGG + Chr6:26865786-26865805 MsG0680031790.01.T01:CDS 40.0%
!! AACCGAACTAGAGTGTTTTC+AGG + Chr6:26866178-26866197 MsG0680031790.01.T01:intron 40.0%
!!! AAACTGGTCAGTGTTTTGAC+TGG - Chr6:26869032-26869051 None:intergenic 40.0%
AATAGATGCAGGCACTTCCA+GGG + Chr6:26869072-26869091 MsG0680031790.01.T01:CDS 45.0%
AATGTCAGCGGCATTTGCAA+GGG - Chr6:26868607-26868626 None:intergenic 45.0%
ACAGCACTTCCAGAAGTGAA+AGG - Chr6:26868221-26868240 None:intergenic 45.0%
ACAGCTGACCATCAAAATCG+CGG + Chr6:26868879-26868898 MsG0680031790.01.T01:intron 45.0%
ACATTGCACTGTAGTGCCAT+CGG + Chr6:26866231-26866250 MsG0680031790.01.T01:intron 45.0%
ACCAACTGAGTTAAGCTCAC+GGG - Chr6:26870059-26870078 None:intergenic 45.0%
ACCAAGGCAAGGATCTTCTA+GGG - Chr6:26867558-26867577 None:intergenic 45.0%
ACCTAAGCTCTTCATGGCAT+TGG + Chr6:26871017-26871036 MsG0680031790.01.T01:CDS 45.0%
ACGGTAAGGAGTTGTTGCAT+GGG + Chr6:26868395-26868414 MsG0680031790.01.T01:intron 45.0%
ACTTGAAAGACTGCTGCCAT+TGG - Chr6:26868919-26868938 None:intergenic 45.0%
AGAACGTACGGAATAGATGC+AGG + Chr6:26869061-26869080 MsG0680031790.01.T01:CDS 45.0%
AGGATAATGTGAGCTTGGGA+AGG + Chr6:26867649-26867668 MsG0680031790.01.T01:intron 45.0%
ATCCAGGAATATGAGCACTC+AGG + Chr6:26868172-26868191 MsG0680031790.01.T01:intron 45.0%
ATCCTGAGTGCTCATATTCC+TGG - Chr6:26868177-26868196 None:intergenic 45.0%
CAGAATGAAGATGTGAGCTC+AGG + Chr6:26867824-26867843 MsG0680031790.01.T01:intron 45.0%
CAGATTGAAGATGTGAGCTC+AGG + Chr6:26867895-26867914 MsG0680031790.01.T01:intron 45.0%
CATCCCAAGGCAAGATTCAT+TGG + Chr6:26868735-26868754 MsG0680031790.01.T01:intron 45.0%
CCTGTGTTCAAGTGAGATTG+GGG - Chr6:26868834-26868853 None:intergenic 45.0%
CCTTAAATACGGCCTTCCAA+AGG - Chr6:26869237-26869256 None:intergenic 45.0%
CTCAGTCTTGATGAGCCTTA+GGG - Chr6:26866468-26866487 None:intergenic 45.0%
GAAACACGAGAACAAAGGAG+TGG - Chr6:26866343-26866362 None:intergenic 45.0%
GAAGCCAATGAATCTTGCCT+TGG - Chr6:26868742-26868761 None:intergenic 45.0%
GAAGCCGAGAATACAAGACT+GGG - Chr6:26866411-26866430 None:intergenic 45.0%
GAATCTTGCCTTGGGATGAA+TGG - Chr6:26868733-26868752 None:intergenic 45.0%
GAGTACTTTGTCTCCTTGCT+TGG - Chr6:26865883-26865902 None:intergenic 45.0%
GCATCTATTCCGTACGTTCT+TGG - Chr6:26869061-26869080 None:intergenic 45.0%
GCTTATCTTAACCCCTTCCT+TGG - Chr6:26869431-26869450 None:intergenic 45.0%
GGAACAAAAAGGAAACCCGT+TGG + Chr6:26868519-26868538 MsG0680031790.01.T01:intron 45.0%
GGAAGAGGATAATGTGAGCT+TGG + Chr6:26867644-26867663 MsG0680031790.01.T01:intron 45.0%
GGAGGAAAAAAACCCAAGCA+AGG + Chr6:26865867-26865886 MsG0680031790.01.T01:CDS 45.0%
GGTGGTCTTCTCTCTTCAAT+GGG + Chr6:26866672-26866691 MsG0680031790.01.T01:intron 45.0%
GTACGTATACCCAGCTTCTA+AGG - Chr6:26869321-26869340 None:intergenic 45.0%
TCAGTCTTGATGAGCCTTAG+GGG - Chr6:26866467-26866486 None:intergenic 45.0%
TCTGAATGCACCACCTATAG+CGG - Chr6:26866271-26866290 None:intergenic 45.0%
TGAAGCCGAGAATACAAGAC+TGG - Chr6:26866412-26866431 None:intergenic 45.0%
TGCAATCAGGAATGCTTTGG+TGG + Chr6:26867419-26867438 MsG0680031790.01.T01:CDS 45.0%
TGTGTCAAGAAGAGACGGTA+AGG + Chr6:26868381-26868400 MsG0680031790.01.T01:intron 45.0%
! ACGTTCTTGGTGCAAGAAAC+TGG - Chr6:26869048-26869067 None:intergenic 45.0%
! ACTACCACTAGCGTATTGGT+CGG - Chr6:26870591-26870610 None:intergenic 45.0%
! ATGTGAAGCCTGTGGTAATG+CGG - Chr6:26869107-26869126 None:intergenic 45.0%
! CAGGATGTTTCTACGGATGA+AGG + Chr6:26868191-26868210 MsG0680031790.01.T01:CDS 45.0%
! CCTTTGGAAGGCCGTATTTA+AGG + Chr6:26869234-26869253 MsG0680031790.01.T01:CDS 45.0%
! CGGTTCCATGGCCTTAAATA+CGG - Chr6:26869248-26869267 None:intergenic 45.0%
! CGTATTTAAGGCCATGGAAC+CGG + Chr6:26869246-26869265 MsG0680031790.01.T01:CDS 45.0%
! CTTCGTACTGATCCTCTACT+GGG - Chr6:26867743-26867762 None:intergenic 45.0%
! GAGCACTCAGGATGTTTCTA+CGG + Chr6:26868184-26868203 MsG0680031790.01.T01:CDS 45.0%
! GGGTTTCCTTTTTGTTCCTG+TGG - Chr6:26868517-26868536 None:intergenic 45.0%
! GTCTCCCAGTCTTGTATTCT+CGG + Chr6:26866404-26866423 MsG0680031790.01.T01:intron 45.0%
! TCTTCGTACTGATCCTCTAC+TGG - Chr6:26867744-26867763 None:intergenic 45.0%
!! CGATTTTGATGGTCAGCTGT+GGG - Chr6:26868879-26868898 None:intergenic 45.0%
!! TTGGAAGGTACTTAATCCCC+AGG + Chr6:26868701-26868720 MsG0680031790.01.T01:intron 45.0%
AAGAACTACCGGGCCGTAAT+TGG - Chr6:26869004-26869023 None:intergenic 50.0%
AAGATTCGGGGTTCAAACCC+CGG - Chr6:26870195-26870214 None:intergenic 50.0%
AATGGACGTTCTACCCCATG+TGG + Chr6:26869270-26869289 MsG0680031790.01.T01:CDS 50.0%
ACCATCAAAATCGCGGTGTC+TGG + Chr6:26868886-26868905 MsG0680031790.01.T01:intron 50.0%
ATGAGCTCAGGGATGAGCTT+CGG + Chr6:26867948-26867967 MsG0680031790.01.T01:intron 50.0%
ATGAGCTTGGGGGGAATCTA+GGG + Chr6:26867695-26867714 MsG0680031790.01.T01:intron 50.0%
ATGCAAGGTCCGGGGTTTAA+AGG + Chr6:26869942-26869961 MsG0680031790.01.T01:intron 50.0%
CAAAATCGCGGTGTCTGGAA+CGG + Chr6:26868891-26868910 MsG0680031790.01.T01:intron 50.0%
CAATGTCAGCGGCATTTGCA+AGG - Chr6:26868608-26868627 None:intergenic 50.0%
CAGTACGAAGATGTGAGCTC+TGG + Chr6:26867753-26867772 MsG0680031790.01.T01:intron 50.0%
CAGTGTAACCAATTACGGCC+CGG + Chr6:26868993-26869012 MsG0680031790.01.T01:intron 50.0%
CCAACTGAGTTAAGCTCACG+GGG - Chr6:26870058-26870077 None:intergenic 50.0%
CCCCAATCTCACTTGAACAC+AGG + Chr6:26868831-26868850 MsG0680031790.01.T01:intron 50.0%
CCTGTGATAACCCACTAGCT+GGG - Chr6:26868301-26868320 None:intergenic 50.0%
CTTGCAAATGCCGCTGACAT+TGG + Chr6:26868606-26868625 MsG0680031790.01.T01:CDS 50.0%
GAATAGATGCAGGCACTTCC+AGG + Chr6:26869071-26869090 MsG0680031790.01.T01:CDS 50.0%
GACCAAGGCAAGGATCTTCT+AGG - Chr6:26867559-26867578 None:intergenic 50.0%
GACGGTAAGGAGTTGTTGCA+TGG + Chr6:26868394-26868413 MsG0680031790.01.T01:intron 50.0%
GAGAAGACCACCCAACATCA+CGG - Chr6:26866664-26866683 None:intergenic 50.0%
GATGGCATGCACATTAAGGG+AGG + Chr6:26865849-26865868 MsG0680031790.01.T01:CDS 50.0%
GCCAATGCCATGAAGAGCTT+AGG - Chr6:26871021-26871040 None:intergenic 50.0%
GCTCAGTCTTGATGAGCCTT+AGG - Chr6:26866469-26866488 None:intergenic 50.0%
GGAGTTGTTGCATGGGCATT+TGG + Chr6:26868402-26868421 MsG0680031790.01.T01:intron 50.0%
GGCTGGGAGAAACAGTATAG+TGG + Chr6:26865990-26866009 MsG0680031790.01.T01:intron 50.0%
GGGTGGTCTTCTCTCTTCAA+TGG + Chr6:26866671-26866690 MsG0680031790.01.T01:intron 50.0%
GGTCGACTGTTCCTCTATTC+TGG + Chr6:26866761-26866780 MsG0680031790.01.T01:intron 50.0%
GTGTTCAAGTGAGATTGGGG+TGG - Chr6:26868831-26868850 None:intergenic 50.0%
GTTATTGAGGTCGCCCAACA+CGG - Chr6:26867161-26867180 None:intergenic 50.0%
GTTCTGATCAGTGTTCACGC+CGG - Chr6:26868955-26868974 None:intergenic 50.0%
TAAGGCCATGGAACCGGTAA+TGG + Chr6:26869252-26869271 MsG0680031790.01.T01:CDS 50.0%
TAATGCGGCAGGAATAACCC+TGG - Chr6:26869092-26869111 None:intergenic 50.0%
TATTCCTGCCGCATTACCAC+AGG + Chr6:26869096-26869115 MsG0680031790.01.T01:CDS 50.0%
TCCCTAGAAGATCCTTGCCT+TGG + Chr6:26867554-26867573 MsG0680031790.01.T01:intron 50.0%
TCCCTGTGGCATATGCAAAC+CGG + Chr6:26867373-26867392 MsG0680031790.01.T01:CDS 50.0%
TCTTGCACCACCGTGATGTT+GGG + Chr6:26866651-26866670 MsG0680031790.01.T01:intron 50.0%
TGATTGCGGATCTACCCCTA+AGG + Chr6:26866450-26866469 MsG0680031790.01.T01:intron 50.0%
TGCTAATACCGCTTGCATGG+CGG + Chr6:26868782-26868801 MsG0680031790.01.T01:intron 50.0%
TGGGGTAGAACGTCCATTAC+CGG - Chr6:26869268-26869287 None:intergenic 50.0%
TGGTGCCTGATGACATGTCA+TGG + Chr6:26869173-26869192 MsG0680031790.01.T01:CDS 50.0%
TTATGTGAGGACGGGATCTC+TGG - Chr6:26868048-26868067 None:intergenic 50.0%
! AACAACGTTATGACGGGGGA+TGG + Chr6:26868556-26868575 MsG0680031790.01.T01:CDS 50.0%
! ATCCGGTTTGCATATGCCAC+AGG - Chr6:26867378-26867397 None:intergenic 50.0%
! GAAGGCCGTATTTAAGGCCA+TGG + Chr6:26869240-26869259 MsG0680031790.01.T01:CDS 50.0%
! TCCAGACACCGCGATTTTGA+TGG - Chr6:26868890-26868909 None:intergenic 50.0%
! TCCGGTTTGCATATGCCACA+GGG - Chr6:26867377-26867396 None:intergenic 50.0%
!! AACGTCCATTACCGGTTCCA+TGG - Chr6:26869260-26869279 None:intergenic 50.0%
!! GAAGGAGTGCCTTTCACTTC+TGG + Chr6:26868209-26868228 MsG0680031790.01.T01:CDS 50.0%
!! GCGATTTTGATGGTCAGCTG+TGG - Chr6:26868880-26868899 None:intergenic 50.0%
!! TCACTTCTGGAAGTGCTGTC+TGG + Chr6:26868222-26868241 MsG0680031790.01.T01:CDS 50.0%
AAGACCACCCAACATCACGG+TGG - Chr6:26866661-26866680 None:intergenic 55.0%
ACTCGCAAACACCCAGCTAG+TGG + Chr6:26868287-26868306 MsG0680031790.01.T01:CDS 55.0%
ATGCACCACCTATAGCGGTC+AGG - Chr6:26866266-26866285 None:intergenic 55.0%
CAGGGATGAGCTTCGGAATG+TGG + Chr6:26867955-26867974 MsG0680031790.01.T01:intron 55.0%
CATGAGCTTGGGGGGAATCT+AGG + Chr6:26867694-26867713 MsG0680031790.01.T01:intron 55.0%
CCCCGTGAGCTTAACTCAGT+TGG + Chr6:26870055-26870074 MsG0680031790.01.T01:intron 55.0%
CTAGATTCCCCCCAAGCTCA+TGG - Chr6:26867696-26867715 None:intergenic 55.0%
CTCGCAAACACCCAGCTAGT+GGG + Chr6:26868288-26868307 MsG0680031790.01.T01:CDS 55.0%
CTCTTGCACCACCGTGATGT+TGG + Chr6:26866650-26866669 MsG0680031790.01.T01:intron 55.0%
GAGCTCAGGGAGCAAACTTC+AGG + Chr6:26867909-26867928 MsG0680031790.01.T01:intron 55.0%
GCCTGTGATAACCCACTAGC+TGG - Chr6:26868302-26868321 None:intergenic 55.0%
GGATGAATGGGTCTTGCCTG+GGG - Chr6:26868720-26868739 None:intergenic 55.0%
GGATGAGCTTCGGAATGTGG+TGG + Chr6:26867958-26867977 MsG0680031790.01.T01:intron 55.0%
GGCAAGACCCATTCATCCCA+AGG + Chr6:26868722-26868741 MsG0680031790.01.T01:intron 55.0%
GGCTGCTAATACCGCTTGCA+TGG + Chr6:26868779-26868798 MsG0680031790.01.T01:intron 55.0%
GGGATGAATGGGTCTTGCCT+GGG - Chr6:26868721-26868740 None:intergenic 55.0%
GGGGCTGTTACCATATCCAC+AGG + Chr6:26868498-26868517 MsG0680031790.01.T01:intron 55.0%
GGTTTGCATATGCCACAGGG+AGG - Chr6:26867374-26867393 None:intergenic 55.0%
GTGACCGACCAATACGCTAG+TGG + Chr6:26870584-26870603 MsG0680031790.01.T01:intron 55.0%
TCATCAGGCACCAGTGCACT+AGG - Chr6:26869166-26869185 None:intergenic 55.0%
TGAGCTTCGGAATGTGGTGG+AGG + Chr6:26867961-26867980 MsG0680031790.01.T01:intron 55.0%
TGAGCTTGGGAAGGAGCTTC+AGG + Chr6:26867658-26867677 MsG0680031790.01.T01:intron 55.0%
TGCACCACCTATAGCGGTCA+GGG - Chr6:26866265-26866284 None:intergenic 55.0%
TGGGAAGGAGCTTCAGGATC+AGG + Chr6:26867664-26867683 MsG0680031790.01.T01:intron 55.0%
TGGGATGAATGGGTCTTGCC+TGG - Chr6:26868722-26868741 None:intergenic 55.0%
TTACTTCCCCGGACGTGAGA+CGG + Chr6:26869135-26869154 MsG0680031790.01.T01:CDS 55.0%
! AATGTGGTGGAGGATGGAGG+AGG + Chr6:26867971-26867990 MsG0680031790.01.T01:intron 55.0%
! CTTCGGAATGTGGTGGAGGA+TGG + Chr6:26867965-26867984 MsG0680031790.01.T01:intron 55.0%
! GGTGTCTGGAACGGAACCAA+TGG + Chr6:26868900-26868919 MsG0680031790.01.T01:intron 55.0%
!! CCCAGCTAGTGGGTTATCAC+AGG + Chr6:26868298-26868317 MsG0680031790.01.T01:CDS 55.0%
ACGGGGGATGGCCAATGTTC+TGG + Chr6:26868568-26868587 MsG0680031790.01.T01:CDS 60.0%
AGGACGAGGCCATGAGCTTG+GGG + Chr6:26867684-26867703 MsG0680031790.01.T01:intron 60.0%
AGGGCAGAGGAGAGCTACTG+AGG + Chr6:26868633-26868652 MsG0680031790.01.T01:CDS 60.0%
ATGCCGCTGACATTGGACCC+AGG + Chr6:26868613-26868632 MsG0680031790.01.T01:CDS 60.0%
CAGGACGAGGCCATGAGCTT+GGG + Chr6:26867683-26867702 MsG0680031790.01.T01:intron 60.0%
CAGTAGCTCTCCTCTGCCCT+GGG - Chr6:26868633-26868652 None:intergenic 60.0%
GAGCTCAGGGAGCGAACTTC+AGG + Chr6:26867838-26867857 MsG0680031790.01.T01:intron 60.0%
GCACCACCTATAGCGGTCAG+GGG - Chr6:26866264-26866283 None:intergenic 60.0%
GGAGCTTCAGGATCAGGACG+AGG + Chr6:26867670-26867689 MsG0680031790.01.T01:intron 60.0%
TCAGGACGAGGCCATGAGCT+TGG + Chr6:26867682-26867701 MsG0680031790.01.T01:intron 60.0%
TCAGTAGCTCTCCTCTGCCC+TGG - Chr6:26868634-26868653 None:intergenic 60.0%
TGACATTGGACCCAGGGCAG+AGG + Chr6:26868620-26868639 MsG0680031790.01.T01:CDS 60.0%
TGCACCACCGTGATGTTGGG+TGG + Chr6:26866654-26866673 MsG0680031790.01.T01:intron 60.0%
TGCCCTGGGTCCAATGTCAG+CGG - Chr6:26868619-26868638 None:intergenic 60.0%
TGCCGCTGACATTGGACCCA+GGG + Chr6:26868614-26868633 MsG0680031790.01.T01:CDS 60.0%
TGTGGCTGGGATTCGAACCC+CGG - Chr6:26870109-26870128 None:intergenic 60.0%
! CGGAATGTGGTGGAGGATGG+AGG + Chr6:26867968-26867987 MsG0680031790.01.T01:intron 60.0%
! GAAGCCTGTGGTAATGCGGC+AGG - Chr6:26869103-26869122 None:intergenic 60.0%
! GGTGCTGAAAGACCTCCCTG+TGG + Chr6:26867359-26867378 MsG0680031790.01.T01:CDS 60.0%
CGACCCCTGACCGCTATAGG+TGG + Chr6:26866258-26866277 MsG0680031790.01.T01:intron 65.0%
GACGAGGCCATGAGCTTGGG+GGG + Chr6:26867686-26867705 MsG0680031790.01.T01:intron 65.0%
GACGGTGGCACCTAGTGCAC+TGG + Chr6:26869153-26869172 MsG0680031790.01.T01:CDS 65.0%
GGACGAGGCCATGAGCTTGG+GGG + Chr6:26867685-26867704 MsG0680031790.01.T01:intron 65.0%
GGCGCCAAGTGAGACTGGGA+TGG - Chr6:26868810-26868829 None:intergenic 65.0%
GGCGCCATCCCAGTCTCACT+TGG + Chr6:26868803-26868822 MsG0680031790.01.T01:intron 65.0%
GGGTGGCGCCAAGTGAGACT+GGG - Chr6:26868814-26868833 None:intergenic 65.0%
! AGGTGCCACCGTCTCACGTC+CGG - Chr6:26869146-26869165 None:intergenic 65.0%
CTTCCCCGGACGTGAGACGG+TGG + Chr6:26869138-26869157 MsG0680031790.01.T01:CDS 70.0%
GCGCGACCCCTGACCGCTAT+AGG + Chr6:26866255-26866274 MsG0680031790.01.T01:intron 70.0%
GGATGGCGCCGCCATGCAAG+CGG - Chr6:26868793-26868812 None:intergenic 70.0%
GGGGTGGCGCCAAGTGAGAC+TGG - Chr6:26868815-26868834 None:intergenic 70.0%
GTGCCACCGTCTCACGTCCG+GGG - Chr6:26869144-26869163 None:intergenic 70.0%
! GGTGCCACCGTCTCACGTCC+GGG - Chr6:26869145-26869164 None:intergenic 70.0%
GGTCAGGGGTCGCGCTCCGA+TGG - Chr6:26866250-26866269 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 26865756 26871095 26865756 ID=MsG0680031790.01;Name=MsG0680031790.01
Chr6 mRNA 26865756 26871095 26865756 ID=MsG0680031790.01.T01;Parent=MsG0680031790.01;Name=MsG0680031790.01.T01;_AED=0.46;_eAED=0.51;_QI=0|0|0|1|0.8|0.66|6|0|398
Chr6 exon 26865756 26865952 26865756 ID=MsG0680031790.01.T01:exon:14226;Parent=MsG0680031790.01.T01
Chr6 exon 26867350 26867475 26867350 ID=MsG0680031790.01.T01:exon:14227;Parent=MsG0680031790.01.T01
Chr6 exon 26868178 26868397 26868178 ID=MsG0680031790.01.T01:exon:14228;Parent=MsG0680031790.01.T01
Chr6 exon 26868520 26868707 26868520 ID=MsG0680031790.01.T01:exon:14229;Parent=MsG0680031790.01.T01
Chr6 exon 26869033 26869301 26869033 ID=MsG0680031790.01.T01:exon:14230;Parent=MsG0680031790.01.T01
Chr6 exon 26870899 26871095 26870899 ID=MsG0680031790.01.T01:exon:14231;Parent=MsG0680031790.01.T01
Chr6 CDS 26865756 26865952 26865756 ID=MsG0680031790.01.T01:cds;Parent=MsG0680031790.01.T01
Chr6 CDS 26867350 26867475 26867350 ID=MsG0680031790.01.T01:cds;Parent=MsG0680031790.01.T01
Chr6 CDS 26868178 26868397 26868178 ID=MsG0680031790.01.T01:cds;Parent=MsG0680031790.01.T01
Chr6 CDS 26868520 26868707 26868520 ID=MsG0680031790.01.T01:cds;Parent=MsG0680031790.01.T01
Chr6 CDS 26869033 26869301 26869033 ID=MsG0680031790.01.T01:cds;Parent=MsG0680031790.01.T01
Chr6 CDS 26870899 26871095 26870899 ID=MsG0680031790.01.T01:cds;Parent=MsG0680031790.01.T01
Gene Sequence

>MsG0680031790.01.T01

ATGTTTAATATTACTGTTCTTGAAATAATTTTTGGCAGGGTGTTTGATAAAGGCACTATGAAAGGTAAATCTGGAAATTTGATGCTTACTTCAGATGGCATGCACATTAAGGGAGGAAAAAAACCCAAGCAAGGAGACAAAGTACTCAAGCGTAACATTCATTTATTGAGGGCGAAAAATACATGTCATGTATCAAGGTTGCAATTGGTGCTGAAAGACCTCCCTGTGGCATATGCAAACCGGATGCAGAGACAGATACAAAGAGATGCAATCAGGAATGCTTTGGTGGAAGAGATGAACGACAAATCAACTCCAATATCCGAGAATATGAGCACTCAGGATGTTTCTACGGATGAAGGAGTGCCTTTCACTTCTGGAAGTGCTGTCTGGCAATCAGTTGAAATGCCACATTCATACTATGACTCAGCTGTGACTCGCAAACACCCAGCTAGTGGGTTATCACAGGCTACCTCTCAAGTCAATGAAGATCAAAGAATCAATGTGATTGATCTTGAAGCTGATGATTTGTGTCAAGAAGAGACGGAACAAAAAGGAAACCCGTTGGATTTCCAGACTTCAAACAACGTTATGACGGGGGATGGCCAATGTTCTGGTCATTTCACACAGCCCTTGCAAATGCCGCTGACATTGGACCCAGGGCAGAGGAGAGCTACTGAGGTTTTCATGCCACAAAGTATGTCGGAGAATATTCATTCCAATGCAGTTGGAAGTCAAAACACTGACCAGTTTCTTGCACCAAGAACGTACGGAATAGATGCAGGCACTTCCAGGGTTATTCCTGCCGCATTACCACAGGCTTCACATTCATTAGATTACTTCCCCGGACGTGAGACGGTGGCACCTAGTGCACTGGTGCCTGATGACATGTCATGGATGATTTGCAACATCCAAATCCTCCTGCATTACATGATCCTTTGGAAGGCCGTATTTAAGGCCATGGAACCGGTAATGGACGTTCTACCCCATGTGGTAGCATTTTCTGAAAGAAAAATGGCACATTCATGTTTGGAAGAATCCTACAAAAAAAGTTTGGAAGAAGACAAGAAGAAGAAAGAAGTGATTCGAATAGAACGTGAATCTGTCATTCCAATTTTGAAACCTAAGCTCTTCATGGCATTGGCTAATCTTATTAGTATGTCTCTCTATCCTTCTTTTTTCCTCTATCTTAGACATTAG
Protein sequence

>MsG0680031790.01.T01

MFNITVLEIIFGRVFDKGTMKGKSGNLMLTSDGMHIKGGKKPKQGDKVLKRNIHLLRAKNTCHVSRLQLVLKDLPVAYANRMQRQIQRDAIRNALVEEMNDKSTPISENMSTQDVSTDEGVPFTSGSAVWQSVEMPHSYYDSAVTRKHPASGLSQATSQVNEDQRINVIDLEADDLCQEETEQKGNPLDFQTSNNVMTGDGQCSGHFTQPLQMPLTLDPGQRRATEVFMPQSMSENIHSNAVGSQNTDQFLAPRTYGIDAGTSRVIPAALPQASHSLDYFPGRETVAPSALVPDDMSWMICNIQILLHYMILWKAVFKAMEPVMDVLPHVVAFSERKMAHSCLEESYKKSLEEDKKKKEVIRIERESVIPILKPKLFMALANLISMSLYPSFFLYLRH*