Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031816.01.T01 | KEH25659.1 | 89.152 | 719 | 75 | 2 | 1 | 716 | 57 | 775 | 0 | 1267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031816.01.T01 | Q4KKX4 | 40.741 | 81 | 48 | 0 | 2 | 82 | 409 | 489 | 4.34E-15 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031816.01.T01 | A0A072U7C0 | 89.152 | 719 | 75 | 2 | 1 | 716 | 57 | 775 | 0.0 | 1267 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0680031816.01.T01 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0680031816.01 | MsG0680033745.01 | 0.855666 | 5.412311e-62 | 1.259111e-58 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031816.01.T01 | MTR_6g033350 | 89.152 | 719 | 75 | 2 | 1 | 716 | 57 | 775 | 0.0 | 1267 |
| MsG0680031816.01.T01 | MTR_1g095570 | 48.991 | 545 | 223 | 13 | 2 | 536 | 345 | 844 | 1.25e-138 | 438 |
| MsG0680031816.01.T01 | MTR_1g095570 | 43.478 | 161 | 56 | 7 | 546 | 690 | 929 | 1070 | 4.04e-19 | 93.2 |
| MsG0680031816.01.T01 | MTR_1g095570 | 48.991 | 545 | 223 | 13 | 2 | 536 | 777 | 1276 | 9.69e-135 | 435 |
| MsG0680031816.01.T01 | MTR_1g095570 | 43.478 | 161 | 56 | 7 | 546 | 690 | 1361 | 1502 | 5.14e-19 | 92.8 |
| MsG0680031816.01.T01 | MTR_6g033345 | 71.369 | 241 | 68 | 1 | 115 | 355 | 2 | 241 | 1.99e-104 | 319 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680031816.01.T01 | AT3G52250 | 36.520 | 408 | 225 | 9 | 2 | 385 | 845 | 1242 | 2.86e-59 | 218 |
| MsG0680031816.01.T01 | AT3G52250 | 36.520 | 408 | 225 | 9 | 2 | 385 | 845 | 1242 | 2.86e-59 | 218 |
Find 178 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGTTTCTGATGGTTCTTC+TGG | 0.123969 | 6:+27254607 | MsG0680031816.01.T01:CDS |
| AAAACGCTCTGCACTGAAAT+TGG | 0.149053 | 6:-27254045 | None:intergenic |
| TTGGGTGTATCTTCTGAATT+TGG | 0.181231 | 6:-27254967 | None:intergenic |
| TGGCAGTTGAATTAGGCTTC+TGG | 0.225789 | 6:-27255032 | None:intergenic |
| CTCTCTTTCCTCTTGAATAA+TGG | 0.273037 | 6:-27253702 | None:intergenic |
| CCAAAACTGACCTGATAAAA+TGG | 0.273177 | 6:+27253507 | MsG0680031816.01.T01:CDS |
| CGCATGTCGTCATCTATAAA+TGG | 0.276143 | 6:-27255327 | None:intergenic |
| TTAGAGAAATTTGCTGCCTT+TGG | 0.278640 | 6:+27253341 | MsG0680031816.01.T01:CDS |
| TTTCCCTTGGCAGTTGAATT+AGG | 0.285400 | 6:-27255039 | None:intergenic |
| ATCTCGGATAGCACAGAAAT+TGG | 0.297991 | 6:+27254484 | MsG0680031816.01.T01:CDS |
| GGCAGTTGAATTAGGCTTCT+GGG | 0.308996 | 6:-27255031 | None:intergenic |
| GCCTGCATTCTCACCACTTC+CGG | 0.312753 | 6:+27255188 | MsG0680031816.01.T01:CDS |
| TAAGTTGGCTGACAGGTTCC+TGG | 0.314875 | 6:-27254296 | None:intergenic |
| TCATCGAAGTTCTTGAATCT+TGG | 0.319044 | 6:-27254723 | None:intergenic |
| TCTCGTCGGAACAGCTTTCT+TGG | 0.321788 | 6:-27253904 | None:intergenic |
| TGGCTGGTCAACACCTGTTT+TGG | 0.323000 | 6:-27254227 | None:intergenic |
| TACAGAATTGGTGTCTGATA+TGG | 0.335594 | 6:+27254540 | MsG0680031816.01.T01:CDS |
| GGATTTCAATGCTCCCTATA+CGG | 0.343004 | 6:+27255209 | MsG0680031816.01.T01:CDS |
| GATGGTTCTTCTGGGCTTCA+AGG | 0.352703 | 6:+27254616 | MsG0680031816.01.T01:CDS |
| TGGTTTCTGATGGTTCTTCT+GGG | 0.359826 | 6:+27254608 | MsG0680031816.01.T01:CDS |
| ATGGAGGGGTTATGATAATA+AGG | 0.360054 | 6:+27253631 | MsG0680031816.01.T01:CDS |
| GCCAAGGGAAATGAAGAAAA+TGG | 0.363585 | 6:+27255051 | MsG0680031816.01.T01:CDS |
| TGAATAATGGCATGACTGTT+TGG | 0.366219 | 6:-27253689 | None:intergenic |
| TGGGCTTCAAGGAGATGAAT+TGG | 0.376231 | 6:+27254627 | MsG0680031816.01.T01:CDS |
| CTGAATTTGGCAAACACTGC+AGG | 0.376317 | 6:-27254954 | None:intergenic |
| TCATAATGAATCCAATCCTT+TGG | 0.377208 | 6:+27254270 | MsG0680031816.01.T01:CDS |
| GGTTTATGACAATGATTTCC+AGG | 0.380130 | 6:+27255113 | MsG0680031816.01.T01:CDS |
| CAGATGGCATTGCGCTTAAT+CGG | 0.386249 | 6:+27253585 | MsG0680031816.01.T01:CDS |
| TTCTGCTGCTGAGGGTAGAC+TGG | 0.387774 | 6:+27254588 | MsG0680031816.01.T01:CDS |
| GTGTTCCCATCACCCGTATA+GGG | 0.391328 | 6:-27255222 | None:intergenic |
| ACACCCAATGTGAAAATATT+CGG | 0.397797 | 6:+27254982 | MsG0680031816.01.T01:CDS |
| CGACGAGAGCTGCGGTGAAA+TGG | 0.405897 | 6:+27253919 | MsG0680031816.01.T01:CDS |
| AGGATACTTCGCGAGCAATA+TGG | 0.409931 | 6:-27255280 | None:intergenic |
| CCATTGGCTGAAGCTGTCTC+TGG | 0.410250 | 6:-27254187 | None:intergenic |
| AAACGCTCTGCACTGAAATT+GGG | 0.413455 | 6:-27254044 | None:intergenic |
| GCGAAGTATCCTGCTGCATT+TGG | 0.415607 | 6:+27255291 | MsG0680031816.01.T01:CDS |
| TACAGATGCTGTAATTGAAT+TGG | 0.424129 | 6:+27254690 | MsG0680031816.01.T01:CDS |
| ATGATGATGTGGATGGTGGC+AGG | 0.424607 | 6:+27254140 | MsG0680031816.01.T01:CDS |
| GATACGTCAGGTTCCAAAAC+AGG | 0.425689 | 6:+27254214 | MsG0680031816.01.T01:CDS |
| ACCACCAATCACAGATTCAT+TGG | 0.434587 | 6:-27254374 | None:intergenic |
| CTGATCCTGTGAAAGGCAAA+AGG | 0.438936 | 6:+27253810 | MsG0680031816.01.T01:CDS |
| GTTCCTGGCTTCCAAAGGAT+TGG | 0.441132 | 6:-27254281 | None:intergenic |
| GGGAGGTGCTGTTACAGAAT+TGG | 0.447224 | 6:+27254528 | MsG0680031816.01.T01:CDS |
| CTCTGGCTATTGAGAAAGAA+AGG | 0.451886 | 6:+27253276 | MsG0680031816.01.T01:CDS |
| CTGTGAAAGGCAAAAGGGTC+AGG | 0.452467 | 6:+27253816 | MsG0680031816.01.T01:CDS |
| GACGACATGCGGAGAGCAAA+TGG | 0.453906 | 6:+27255339 | MsG0680031816.01.T01:CDS |
| CTTAATCGGAAAATGCGTTC+AGG | 0.458740 | 6:+27253599 | MsG0680031816.01.T01:CDS |
| GGTGAAAGAGCTGGAGTTGT+TGG | 0.462167 | 6:+27254106 | MsG0680031816.01.T01:CDS |
| ATTTCCAATGAATCTGTGAT+TGG | 0.463279 | 6:+27254370 | MsG0680031816.01.T01:CDS |
| AGCTGGAGTTGTTGGATCAC+CGG | 0.463799 | 6:+27254114 | MsG0680031816.01.T01:CDS |
| TAACTATAGCACTCTGGTGC+TGG | 0.467059 | 6:-27254462 | None:intergenic |
| CTCCATGCTCTATCATCCTA+TGG | 0.469177 | 6:+27253980 | MsG0680031816.01.T01:CDS |
| TTCAGGACGTTCCCTATGGA+GGG | 0.471838 | 6:+27253616 | MsG0680031816.01.T01:CDS |
| AAATGATCCCCAACTATGCC+TGG | 0.472815 | 6:+27254801 | MsG0680031816.01.T01:CDS |
| CTGCTCTAATTCTGCTGCTG+AGG | 0.473036 | 6:+27254579 | MsG0680031816.01.T01:CDS |
| AGGATCAGCTGAACTAGTTA+TGG | 0.473205 | 6:-27253795 | None:intergenic |
| TGTGTTCCCATCACCCGTAT+AGG | 0.473642 | 6:-27255223 | None:intergenic |
| ATTCATCTAAGTTGGCTGAC+AGG | 0.474255 | 6:-27254303 | None:intergenic |
| ACAGAATTGGTGTCTGATAT+GGG | 0.477056 | 6:+27254541 | MsG0680031816.01.T01:CDS |
| ATGGAGGAACTCGCTGCCTC+AGG | 0.480085 | 6:-27253776 | None:intergenic |
| CTTTCTCTTCTGAAGTCCAA+GGG | 0.481001 | 6:-27253310 | None:intergenic |
| AATCCAATCCTTTGGAAGCC+AGG | 0.484624 | 6:+27254278 | MsG0680031816.01.T01:CDS |
| TGGGCTGGTTGAAGATCCTC+TGG | 0.485490 | 6:+27253259 | MsG0680031816.01.T01:CDS |
| TAATGCAGCTGCTGATACAT+TGG | 0.488819 | 6:+27253727 | MsG0680031816.01.T01:CDS |
| GATCTCATGGGTGAAAGAGC+TGG | 0.490424 | 6:+27254097 | MsG0680031816.01.T01:CDS |
| GCCAATGGTTCTGATACGTC+AGG | 0.497092 | 6:+27254202 | MsG0680031816.01.T01:CDS |
| ACGCATTGGAATGGATCTCA+TGG | 0.497330 | 6:+27254084 | MsG0680031816.01.T01:CDS |
| GATTTCAATGCTCCCTATAC+GGG | 0.498305 | 6:+27255210 | MsG0680031816.01.T01:CDS |
| CCAGAGTGCTATAGTTATCT+CGG | 0.499101 | 6:+27254468 | MsG0680031816.01.T01:CDS |
| CCGCTGTTGTCTTGTGGTCA+AGG | 0.500291 | 6:-27253391 | None:intergenic |
| ATGAATCACAGGTAGTCAAC+GGG | 0.501056 | 6:+27254320 | MsG0680031816.01.T01:CDS |
| AATGCTCCCTATACGGGTGA+TGG | 0.504458 | 6:+27255216 | MsG0680031816.01.T01:CDS |
| TATTATCATAACCCCTCCAT+AGG | 0.505263 | 6:-27253628 | None:intergenic |
| GATAATAAGGCCATGTCAAA+GGG | 0.505947 | 6:+27253644 | MsG0680031816.01.T01:CDS |
| CCAGAGACAGCTTCAGCCAA+TGG | 0.506318 | 6:+27254187 | MsG0680031816.01.T01:CDS |
| TTCACATTCAATCTTGTGAC+AGG | 0.508681 | 6:-27254856 | None:intergenic |
| CTTCTCCACATCTGTCCAAT+CGG | 0.513579 | 6:-27253948 | None:intergenic |
| TGAAGTCCAAGGGTTTATCA+TGG | 0.514129 | 6:-27253300 | None:intergenic |
| TGTTCTTATCAGATGTTGGC+TGG | 0.516938 | 6:-27254243 | None:intergenic |
| TGCAAGACTCACAAACGCAT+TGG | 0.517176 | 6:+27254070 | MsG0680031816.01.T01:CDS |
| TGCGTTCAGGACGTTCCCTA+TGG | 0.517909 | 6:+27253612 | MsG0680031816.01.T01:CDS |
| TCCTGAGTGGTGACTTGCAT+CGG | 0.518541 | 6:-27253875 | None:intergenic |
| TTAGGCTTCTGGGTGGATGA+AGG | 0.519936 | 6:-27255021 | None:intergenic |
| TACCTGTGATTCATCTAAGT+TGG | 0.520959 | 6:-27254311 | None:intergenic |
| TCTTTCTCTTCTGAAGTCCA+AGG | 0.521180 | 6:-27253311 | None:intergenic |
| GCAGCTTCAGTGACGGCAGA+TGG | 0.526106 | 6:+27253569 | MsG0680031816.01.T01:CDS |
| TGATAATAAGGCCATGTCAA+AGG | 0.526183 | 6:+27253643 | MsG0680031816.01.T01:CDS |
| GCTGGAGTTGTTGGATCACC+GGG | 0.527988 | 6:+27254115 | MsG0680031816.01.T01:CDS |
| GACTCACAAACGCATTGGAA+TGG | 0.528455 | 6:+27254075 | MsG0680031816.01.T01:CDS |
| TTGGACTTCAGAAGAGAAAG+AGG | 0.528606 | 6:+27253313 | MsG0680031816.01.T01:CDS |
| CCCATGGCTAGAACTCATGA+TGG | 0.532113 | 6:-27255154 | None:intergenic |
| TCTGACAAACCTGAGAATTG+AGG | 0.532128 | 6:-27254829 | None:intergenic |
| GACAGGTTCCTGGCTTCCAA+AGG | 0.533901 | 6:-27254286 | None:intergenic |
| ACCTGACGTATCAGAACCAT+TGG | 0.534157 | 6:-27254203 | None:intergenic |
| CTCTGGTGCTGGACAGTACC+CGG | 0.535998 | 6:-27254451 | None:intergenic |
| GAATACTTCACTATCACCCT+TGG | 0.537857 | 6:+27254744 | MsG0680031816.01.T01:CDS |
| CCATGGCTAGAACTCATGAT+GGG | 0.538507 | 6:-27255153 | None:intergenic |
| GAGGGTAGACTGGTTTCTGA+TGG | 0.539296 | 6:+27254598 | MsG0680031816.01.T01:CDS |
| GCTTCAAGGAGATGAATTGG+AGG | 0.539749 | 6:+27254630 | MsG0680031816.01.T01:CDS |
| GTATAGGGAGCATTGAAATC+CGG | 0.540575 | 6:-27255207 | None:intergenic |
| TCTTGAACAAGATGCTTCCA+AGG | 0.542554 | 6:-27254761 | None:intergenic |
| GGGCATTGAAATCAATGCCC+TGG | 0.543279 | 6:-27255131 | None:intergenic |
| CACAGTCCGCTGTTGTCTTG+TGG | 0.546467 | 6:-27253397 | None:intergenic |
| TGCTCTAATTCTGCTGCTGA+GGG | 0.547011 | 6:+27254580 | MsG0680031816.01.T01:CDS |
| GCGAGCAATATGGAAGAAGC+AGG | 0.547361 | 6:-27255270 | None:intergenic |
| GAAGCCTAATTCAACTGCCA+AGG | 0.549559 | 6:+27255035 | MsG0680031816.01.T01:CDS |
| TCCGGAAGTGGTGAGAATGC+AGG | 0.550666 | 6:-27255189 | None:intergenic |
| CAGTCATGCCATTATTCAAG+AGG | 0.553730 | 6:+27253694 | MsG0680031816.01.T01:CDS |
| CAATGTGAAAATATTCGGTA+AGG | 0.553894 | 6:+27254987 | MsG0680031816.01.T01:CDS |
| GAAAAGATAAGCCGAGTGAA+GGG | 0.556375 | 6:+27254506 | MsG0680031816.01.T01:CDS |
| CAATTCTCAGGTTTGTCAGA+GGG | 0.558911 | 6:+27254832 | MsG0680031816.01.T01:CDS |
| CAGGCTGTACTGTGCTCCCA+TGG | 0.559128 | 6:-27255170 | None:intergenic |
| AGCCAACTTAGATGAATCAC+AGG | 0.562308 | 6:+27254309 | MsG0680031816.01.T01:CDS |
| TGATCCTGTGAAAGGCAAAA+GGG | 0.562771 | 6:+27253811 | MsG0680031816.01.T01:CDS |
| AATGGTACCCATGATAATGC+TGG | 0.564415 | 6:+27255069 | MsG0680031816.01.T01:CDS |
| TGCTCTATCATCCTATGGAA+AGG | 0.564466 | 6:+27253985 | MsG0680031816.01.T01:CDS |
| CAATGCAAAATCCTTTCCAT+AGG | 0.567065 | 6:-27253996 | None:intergenic |
| CTTGGCATGGATGGTAATGC+AGG | 0.570979 | 6:+27254406 | MsG0680031816.01.T01:CDS |
| GATACATTGGCTAGTATATG+TGG | 0.571499 | 6:+27253740 | MsG0680031816.01.T01:CDS |
| CTTCTGGGTGGATGAAGGAA+TGG | 0.571648 | 6:-27255016 | None:intergenic |
| ATGCTCCCTATACGGGTGAT+GGG | 0.572242 | 6:+27255217 | MsG0680031816.01.T01:CDS |
| TCAGGAAGTCAGTGAAAGCA+AGG | 0.573458 | 6:+27253834 | MsG0680031816.01.T01:CDS |
| AAAGGGCCATGATAAACCCT+TGG | 0.575607 | 6:+27253294 | MsG0680031816.01.T01:CDS |
| GGAAAAGATAAGCCGAGTGA+AGG | 0.575823 | 6:+27254505 | MsG0680031816.01.T01:CDS |
| GTTCAGGACGTTCCCTATGG+AGG | 0.577250 | 6:+27253615 | MsG0680031816.01.T01:CDS |
| TCTGGCTATTGAGAAAGAAA+GGG | 0.579078 | 6:+27253277 | MsG0680031816.01.T01:CDS |
| GCATTCAGACCAAATGCAGC+AGG | 0.579481 | 6:-27255300 | None:intergenic |
| GGAGCATTGAAATCCGGAAG+TGG | 0.581919 | 6:-27255201 | None:intergenic |
| TACAAAATCAGCGAAGCTGA+AGG | 0.582263 | 6:+27255092 | MsG0680031816.01.T01:CDS |
| CATTTCACCGCAGCTCTCGT+CGG | 0.584245 | 6:-27253918 | None:intergenic |
| GTGAAATGGAGCTTACCGAT+TGG | 0.587122 | 6:+27253933 | MsG0680031816.01.T01:CDS |
| TTCCATAGGATGATAGAGCA+TGG | 0.587419 | 6:-27253982 | None:intergenic |
| CCGAGATAACTATAGCACTC+TGG | 0.587986 | 6:-27254468 | None:intergenic |
| TCAGGACGTTCCCTATGGAG+GGG | 0.588272 | 6:+27253617 | MsG0680031816.01.T01:CDS |
| AGCATGTTCTTATCAGATGT+TGG | 0.589091 | 6:-27254247 | None:intergenic |
| ATTATCATAACCCCTCCATA+GGG | 0.589215 | 6:-27253627 | None:intergenic |
| CTTTCTTTCTCAATAGCCAG+AGG | 0.589301 | 6:-27253275 | None:intergenic |
| CGATTGGACAGATGTGGAGA+AGG | 0.591263 | 6:+27253949 | MsG0680031816.01.T01:CDS |
| CCATCATGAGTTCTAGCCAT+GGG | 0.592587 | 6:+27255154 | MsG0680031816.01.T01:CDS |
| GATGAATCACAGGTAGTCAA+CGG | 0.593526 | 6:+27254319 | MsG0680031816.01.T01:CDS |
| CGAGTTGATAGAGATGAAGC+TGG | 0.594782 | 6:+27254667 | MsG0680031816.01.T01:CDS |
| GTTTATGACAATGATTTCCA+GGG | 0.595004 | 6:+27255114 | MsG0680031816.01.T01:CDS |
| GGGGATGATGATGTGGATGG+TGG | 0.597607 | 6:+27254136 | MsG0680031816.01.T01:CDS |
| AGTTCAGCTGATCCTGTGAA+AGG | 0.598452 | 6:+27253803 | MsG0680031816.01.T01:CDS |
| GAGTCTAAACTTGGCATGGA+TGG | 0.599051 | 6:+27254397 | MsG0680031816.01.T01:CDS |
| CGCATTGGAATGGATCTCAT+GGG | 0.600221 | 6:+27254085 | MsG0680031816.01.T01:CDS |
| AAATGGTTCAGAAAAGAAAG+AGG | 0.601065 | 6:+27255356 | MsG0680031816.01.T01:CDS |
| ATTGGTGGTGAGTCTAAACT+TGG | 0.603710 | 6:+27254388 | MsG0680031816.01.T01:CDS |
| GCTTACCGATTGGACAGATG+TGG | 0.603842 | 6:+27253943 | MsG0680031816.01.T01:CDS |
| TCAATTCTCAGGTTTGTCAG+AGG | 0.610881 | 6:+27254831 | MsG0680031816.01.T01:CDS |
| TGGTGAGTCTAAACTTGGCA+TGG | 0.611435 | 6:+27254393 | MsG0680031816.01.T01:CDS |
| CCCATCATGAGTTCTAGCCA+TGG | 0.612513 | 6:+27255153 | MsG0680031816.01.T01:CDS |
| ATCAGCTGAACTAGTTATGG+AGG | 0.613032 | 6:-27253792 | None:intergenic |
| CCATCCACATCATCATCCCC+CGG | 0.614465 | 6:-27254133 | None:intergenic |
| AAGCCTAATTCAACTGCCAA+GGG | 0.615663 | 6:+27255036 | MsG0680031816.01.T01:CDS |
| GCATTGATTGCACAGTGTGT+CGG | 0.623850 | 6:+27254013 | MsG0680031816.01.T01:CDS |
| CAGAATTGGTGTCTGATATG+GGG | 0.626814 | 6:+27254542 | MsG0680031816.01.T01:CDS |
| TTTGAGGGCAGCTTCAGTGA+CGG | 0.627993 | 6:+27253562 | MsG0680031816.01.T01:CDS |
| TCCAATGAATCTGTGATTGG+TGG | 0.629322 | 6:+27254373 | MsG0680031816.01.T01:CDS |
| AAAAGATAAGCCGAGTGAAG+GGG | 0.630313 | 6:+27254507 | MsG0680031816.01.T01:CDS |
| TCTGAACACATCTAACTACT+CGG | 0.630828 | 6:-27255381 | None:intergenic |
| AGCTGTTCCGACGAGAGCTG+CGG | 0.631018 | 6:+27253911 | MsG0680031816.01.T01:CDS |
| AAAGATAAGCCGAGTGAAGG+GGG | 0.635989 | 6:+27254508 | MsG0680031816.01.T01:CDS |
| CATTTATAGATGACGACATG+CGG | 0.637601 | 6:+27255328 | MsG0680031816.01.T01:CDS |
| GCAGCAGAATTAGAGCAGCA+TGG | 0.638462 | 6:-27254574 | None:intergenic |
| TCCGATGCAAGTCACCACTC+AGG | 0.638810 | 6:+27253874 | MsG0680031816.01.T01:CDS |
| CATGGCTAGAACTCATGATG+GGG | 0.650282 | 6:-27255152 | None:intergenic |
| CTTGAACAAGATGCTTCCAA+GGG | 0.650737 | 6:-27254760 | None:intergenic |
| TGAGTGGTGACTTGCATCGG+AGG | 0.653915 | 6:-27253872 | None:intergenic |
| TGGAGTTGTTGGATCACCGG+GGG | 0.663303 | 6:+27254117 | MsG0680031816.01.T01:CDS |
| TTCTTGGTCAATATCCTGAG+TGG | 0.664707 | 6:-27253888 | None:intergenic |
| CCTTGACCACAAGACAACAG+CGG | 0.674767 | 6:+27253391 | MsG0680031816.01.T01:CDS |
| GTCAACGGGAAAGTAGACAA+TGG | 0.676244 | 6:+27254334 | MsG0680031816.01.T01:CDS |
| ATGGCTAGAACTCATGATGG+GGG | 0.691683 | 6:-27255151 | None:intergenic |
| ACATTGGCTAGTATATGTGG+TGG | 0.720828 | 6:+27253743 | MsG0680031816.01.T01:CDS |
| GCAGGAAGTGATGAGAAACG+AGG | 0.730233 | 6:-27255252 | None:intergenic |
| CTGGAGTTGTTGGATCACCG+GGG | 0.740174 | 6:+27254116 | MsG0680031816.01.T01:CDS |
| AGTTGAATTAGGCTTCTGGG+TGG | 0.746051 | 6:-27255028 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTAAAATCTTTTCCAA+AGG | - | Chr6:27253360-27253379 | None:intergenic | 20.0% |
| !! | TTACCGAATATTTTCACATT+GGG | - | Chr6:27254988-27255007 | None:intergenic | 25.0% |
| AAAAAAGATGATGACAAGCT+AGG | + | Chr6:27253470-27253489 | MsG0680031816.01.T01:CDS | 30.0% | |
| AAAAAGATGATGACAAGCTA+GGG | + | Chr6:27253471-27253490 | MsG0680031816.01.T01:CDS | 30.0% | |
| AAATGGTTCAGAAAAGAAAG+AGG | + | Chr6:27255356-27255375 | MsG0680031816.01.T01:CDS | 30.0% | |
| ACACCCAATGTGAAAATATT+CGG | + | Chr6:27254982-27255001 | MsG0680031816.01.T01:CDS | 30.0% | |
| ATTTCCAATGAATCTGTGAT+TGG | + | Chr6:27254370-27254389 | MsG0680031816.01.T01:CDS | 30.0% | |
| CAATGTGAAAATATTCGGTA+AGG | + | Chr6:27254987-27255006 | MsG0680031816.01.T01:CDS | 30.0% | |
| GTTTATGACAATGATTTCCA+GGG | + | Chr6:27255114-27255133 | MsG0680031816.01.T01:CDS | 30.0% | |
| TACAGATGCTGTAATTGAAT+TGG | + | Chr6:27254690-27254709 | MsG0680031816.01.T01:CDS | 30.0% | |
| TCATAATGAATCCAATCCTT+TGG | + | Chr6:27254270-27254289 | MsG0680031816.01.T01:CDS | 30.0% | |
| ! | ATTTTGTACCAGCATTATCA+TGG | - | Chr6:27255080-27255099 | None:intergenic | 30.0% |
| ! | CTTACCGAATATTTTCACAT+TGG | - | Chr6:27254989-27255008 | None:intergenic | 30.0% |
| ! | CTTCAGAATTCCATTTTATC+AGG | - | Chr6:27253520-27253539 | None:intergenic | 30.0% |
| ! | TTTTGTACCAGCATTATCAT+GGG | - | Chr6:27255079-27255098 | None:intergenic | 30.0% |
| AGCATGTTCTTATCAGATGT+TGG | - | Chr6:27254250-27254269 | None:intergenic | 35.0% | |
| ATGGAGGGGTTATGATAATA+AGG | + | Chr6:27253631-27253650 | MsG0680031816.01.T01:CDS | 35.0% | |
| ATTATCATAACCCCTCCATA+GGG | - | Chr6:27253630-27253649 | None:intergenic | 35.0% | |
| CAATGCAAAATCCTTTCCAT+AGG | - | Chr6:27253999-27254018 | None:intergenic | 35.0% | |
| CATTTATAGATGACGACATG+CGG | + | Chr6:27255328-27255347 | MsG0680031816.01.T01:CDS | 35.0% | |
| CCAAAACTGACCTGATAAAA+TGG | + | Chr6:27253507-27253526 | MsG0680031816.01.T01:CDS | 35.0% | |
| CTCTCTTTCCTCTTGAATAA+TGG | - | Chr6:27253705-27253724 | None:intergenic | 35.0% | |
| GATAATAAGGCCATGTCAAA+GGG | + | Chr6:27253644-27253663 | MsG0680031816.01.T01:CDS | 35.0% | |
| GGTTTATGACAATGATTTCC+AGG | + | Chr6:27255113-27255132 | MsG0680031816.01.T01:CDS | 35.0% | |
| TACCTGTGATTCATCTAAGT+TGG | - | Chr6:27254314-27254333 | None:intergenic | 35.0% | |
| TATTATCATAACCCCTCCAT+AGG | - | Chr6:27253631-27253650 | None:intergenic | 35.0% | |
| TCATCGAAGTTCTTGAATCT+TGG | - | Chr6:27254726-27254745 | None:intergenic | 35.0% | |
| TCTGGCTATTGAGAAAGAAA+GGG | + | Chr6:27253277-27253296 | MsG0680031816.01.T01:CDS | 35.0% | |
| TGAATAATGGCATGACTGTT+TGG | - | Chr6:27253692-27253711 | None:intergenic | 35.0% | |
| TGATAATAAGGCCATGTCAA+AGG | + | Chr6:27253643-27253662 | MsG0680031816.01.T01:CDS | 35.0% | |
| TTCACATTCAATCTTGTGAC+AGG | - | Chr6:27254859-27254878 | None:intergenic | 35.0% | |
| TTGGGTGTATCTTCTGAATT+TGG | - | Chr6:27254970-27254989 | None:intergenic | 35.0% | |
| ! | ACAGAATTGGTGTCTGATAT+GGG | + | Chr6:27254541-27254560 | MsG0680031816.01.T01:CDS | 35.0% |
| ! | ACCATTTTCTTCATTTCCCT+TGG | - | Chr6:27255055-27255074 | None:intergenic | 35.0% |
| ! | CCATTTTATCAGGTCAGTTT+TGG | - | Chr6:27253510-27253529 | None:intergenic | 35.0% |
| ! | GATACATTGGCTAGTATATG+TGG | + | Chr6:27253740-27253759 | MsG0680031816.01.T01:CDS | 35.0% |
| ! | TACAGAATTGGTGTCTGATA+TGG | + | Chr6:27254540-27254559 | MsG0680031816.01.T01:CDS | 35.0% |
| !! | TTAGAGAAATTTGCTGCCTT+TGG | + | Chr6:27253341-27253360 | MsG0680031816.01.T01:CDS | 35.0% |
| !! | TTCTTCGCTTGAAGTTTTGA+GGG | + | Chr6:27253547-27253566 | MsG0680031816.01.T01:CDS | 35.0% |
| !!! | CTGATTGTTTTGAGAACATC+AGG | + | Chr6:27253447-27253466 | MsG0680031816.01.T01:CDS | 35.0% |
| !!! | GTTTTTATCTAGTAATGGGC+TGG | + | Chr6:27253244-27253263 | MsG0680031816.01.T01:CDS | 35.0% |
| AAAACGCTCTGCACTGAAAT+TGG | - | Chr6:27254048-27254067 | None:intergenic | 40.0% | |
| AAAAGATAAGCCGAGTGAAG+GGG | + | Chr6:27254507-27254526 | MsG0680031816.01.T01:CDS | 40.0% | |
| AAACGCTCTGCACTGAAATT+GGG | - | Chr6:27254047-27254066 | None:intergenic | 40.0% | |
| AAGCCTAATTCAACTGCCAA+GGG | + | Chr6:27255036-27255055 | MsG0680031816.01.T01:CDS | 40.0% | |
| ACCACCAATCACAGATTCAT+TGG | - | Chr6:27254377-27254396 | None:intergenic | 40.0% | |
| AGCCAACTTAGATGAATCAC+AGG | + | Chr6:27254309-27254328 | MsG0680031816.01.T01:CDS | 40.0% | |
| AGGATCAGCTGAACTAGTTA+TGG | - | Chr6:27253798-27253817 | None:intergenic | 40.0% | |
| ATCAGCTGAACTAGTTATGG+AGG | - | Chr6:27253795-27253814 | None:intergenic | 40.0% | |
| ATCTCGGATAGCACAGAAAT+TGG | + | Chr6:27254484-27254503 | MsG0680031816.01.T01:CDS | 40.0% | |
| ATGAATCACAGGTAGTCAAC+GGG | + | Chr6:27254320-27254339 | MsG0680031816.01.T01:CDS | 40.0% | |
| CAATTCTCAGGTTTGTCAGA+GGG | + | Chr6:27254832-27254851 | MsG0680031816.01.T01:CDS | 40.0% | |
| CAGTCATGCCATTATTCAAG+AGG | + | Chr6:27253694-27253713 | MsG0680031816.01.T01:CDS | 40.0% | |
| CGCATGTCGTCATCTATAAA+TGG | - | Chr6:27255330-27255349 | None:intergenic | 40.0% | |
| CTCTGGCTATTGAGAAAGAA+AGG | + | Chr6:27253276-27253295 | MsG0680031816.01.T01:CDS | 40.0% | |
| CTGGAAAAACCTCAATTCTC+AGG | + | Chr6:27254820-27254839 | MsG0680031816.01.T01:CDS | 40.0% | |
| CTTAATCGGAAAATGCGTTC+AGG | + | Chr6:27253599-27253618 | MsG0680031816.01.T01:CDS | 40.0% | |
| CTTGAACAAGATGCTTCCAA+GGG | - | Chr6:27254763-27254782 | None:intergenic | 40.0% | |
| CTTTCTTTCTCAATAGCCAG+AGG | - | Chr6:27253278-27253297 | None:intergenic | 40.0% | |
| GAAAAGATAAGCCGAGTGAA+GGG | + | Chr6:27254506-27254525 | MsG0680031816.01.T01:CDS | 40.0% | |
| GAATACTTCACTATCACCCT+TGG | + | Chr6:27254744-27254763 | MsG0680031816.01.T01:CDS | 40.0% | |
| GATGAATCACAGGTAGTCAA+CGG | + | Chr6:27254319-27254338 | MsG0680031816.01.T01:CDS | 40.0% | |
| GATTTCAATGCTCCCTATAC+GGG | + | Chr6:27255210-27255229 | MsG0680031816.01.T01:CDS | 40.0% | |
| GCCAAGGGAAATGAAGAAAA+TGG | + | Chr6:27255051-27255070 | MsG0680031816.01.T01:CDS | 40.0% | |
| GGATTTCAATGCTCCCTATA+CGG | + | Chr6:27255209-27255228 | MsG0680031816.01.T01:CDS | 40.0% | |
| TAATGCAGCTGCTGATACAT+TGG | + | Chr6:27253727-27253746 | MsG0680031816.01.T01:CDS | 40.0% | |
| TACAAAATCAGCGAAGCTGA+AGG | + | Chr6:27255092-27255111 | MsG0680031816.01.T01:CDS | 40.0% | |
| TCAATTCTCAGGTTTGTCAG+AGG | + | Chr6:27254831-27254850 | MsG0680031816.01.T01:CDS | 40.0% | |
| TCCAATGAATCTGTGATTGG+TGG | + | Chr6:27254373-27254392 | MsG0680031816.01.T01:CDS | 40.0% | |
| TCTGACAAACCTGAGAATTG+AGG | - | Chr6:27254832-27254851 | None:intergenic | 40.0% | |
| TCTTGAACAAGATGCTTCCA+AGG | - | Chr6:27254764-27254783 | None:intergenic | 40.0% | |
| TGAAGTCCAAGGGTTTATCA+TGG | - | Chr6:27253303-27253322 | None:intergenic | 40.0% | |
| TGATCCTGTGAAAGGCAAAA+GGG | + | Chr6:27253811-27253830 | MsG0680031816.01.T01:CDS | 40.0% | |
| TGCTCTATCATCCTATGGAA+AGG | + | Chr6:27253985-27254004 | MsG0680031816.01.T01:CDS | 40.0% | |
| TGGTTTCTGATGGTTCTTCT+GGG | + | Chr6:27254608-27254627 | MsG0680031816.01.T01:CDS | 40.0% | |
| TGTTCTTATCAGATGTTGGC+TGG | - | Chr6:27254246-27254265 | None:intergenic | 40.0% | |
| TTCCATAGGATGATAGAGCA+TGG | - | Chr6:27253985-27254004 | None:intergenic | 40.0% | |
| TTCTTGGTCAATATCCTGAG+TGG | - | Chr6:27253891-27253910 | None:intergenic | 40.0% | |
| TTGGACTTCAGAAGAGAAAG+AGG | + | Chr6:27253313-27253332 | MsG0680031816.01.T01:CDS | 40.0% | |
| TTTCCCTTGGCAGTTGAATT+AGG | - | Chr6:27255042-27255061 | None:intergenic | 40.0% | |
| ! | AATGGTACCCATGATAATGC+TGG | + | Chr6:27255069-27255088 | MsG0680031816.01.T01:CDS | 40.0% |
| ! | ACATTGGCTAGTATATGTGG+TGG | + | Chr6:27253743-27253762 | MsG0680031816.01.T01:CDS | 40.0% |
| ! | AGGTTTTTCCAGGCATAGTT+GGG | - | Chr6:27254812-27254831 | None:intergenic | 40.0% |
| ! | ATTCATCTAAGTTGGCTGAC+AGG | - | Chr6:27254306-27254325 | None:intergenic | 40.0% |
| ! | CAGAATTGGTGTCTGATATG+GGG | + | Chr6:27254542-27254561 | MsG0680031816.01.T01:CDS | 40.0% |
| ! | CCAGAGTGCTATAGTTATCT+CGG | + | Chr6:27254468-27254487 | MsG0680031816.01.T01:CDS | 40.0% |
| ! | CTGAGAATTGAGGTTTTTCC+AGG | - | Chr6:27254822-27254841 | None:intergenic | 40.0% |
| ! | CTTCTTCGCTTGAAGTTTTG+AGG | + | Chr6:27253546-27253565 | MsG0680031816.01.T01:CDS | 40.0% |
| ! | GATTTTGTCTCCCTTTGACA+TGG | - | Chr6:27253657-27253676 | None:intergenic | 40.0% |
| ! | TGGTGGTTTTCATTTACCTG+AGG | + | Chr6:27253760-27253779 | MsG0680031816.01.T01:CDS | 40.0% |
| !! | ATTGGTGGTGAGTCTAAACT+TGG | + | Chr6:27254388-27254407 | MsG0680031816.01.T01:CDS | 40.0% |
| !! | CTTTCTCTTCTGAAGTCCAA+GGG | - | Chr6:27253313-27253332 | None:intergenic | 40.0% |
| !! | GTATAGGGAGCATTGAAATC+CGG | - | Chr6:27255210-27255229 | None:intergenic | 40.0% |
| !! | GTGTCTTGTGCAGTTTTGAT+GGG | + | Chr6:27254428-27254447 | MsG0680031816.01.T01:CDS | 40.0% |
| !! | TCTTTCTCTTCTGAAGTCCA+AGG | - | Chr6:27253314-27253333 | None:intergenic | 40.0% |
| !!! | GTTGCTGCTTTTGTCACAAA+AGG | + | Chr6:27254906-27254925 | MsG0680031816.01.T01:CDS | 40.0% |
| AAAGATAAGCCGAGTGAAGG+GGG | + | Chr6:27254508-27254527 | MsG0680031816.01.T01:CDS | 45.0% | |
| AAAGGGCCATGATAAACCCT+TGG | + | Chr6:27253294-27253313 | MsG0680031816.01.T01:CDS | 45.0% | |
| AAATGATCCCCAACTATGCC+TGG | + | Chr6:27254801-27254820 | MsG0680031816.01.T01:CDS | 45.0% | |
| ACCTGACGTATCAGAACCAT+TGG | - | Chr6:27254206-27254225 | None:intergenic | 45.0% | |
| ACGCATTGGAATGGATCTCA+TGG | + | Chr6:27254084-27254103 | MsG0680031816.01.T01:CDS | 45.0% | |
| AGGATACTTCGCGAGCAATA+TGG | - | Chr6:27255283-27255302 | None:intergenic | 45.0% | |
| AGTTCAGCTGATCCTGTGAA+AGG | + | Chr6:27253803-27253822 | MsG0680031816.01.T01:CDS | 45.0% | |
| AGTTGAATTAGGCTTCTGGG+TGG | - | Chr6:27255031-27255050 | None:intergenic | 45.0% | |
| ATGGCTAGAACTCATGATGG+GGG | - | Chr6:27255154-27255173 | None:intergenic | 45.0% | |
| CAGATGGCATTGCGCTTAAT+CGG | + | Chr6:27253585-27253604 | MsG0680031816.01.T01:CDS | 45.0% | |
| CATGGCTAGAACTCATGATG+GGG | - | Chr6:27255155-27255174 | None:intergenic | 45.0% | |
| CCATGGCTAGAACTCATGAT+GGG | - | Chr6:27255156-27255175 | None:intergenic | 45.0% | |
| CCGAGATAACTATAGCACTC+TGG | - | Chr6:27254471-27254490 | None:intergenic | 45.0% | |
| CGCATTGGAATGGATCTCAT+GGG | + | Chr6:27254085-27254104 | MsG0680031816.01.T01:CDS | 45.0% | |
| CTCCATGCTCTATCATCCTA+TGG | + | Chr6:27253980-27253999 | MsG0680031816.01.T01:CDS | 45.0% | |
| CTGAATTTGGCAAACACTGC+AGG | - | Chr6:27254957-27254976 | None:intergenic | 45.0% | |
| CTGATCCTGTGAAAGGCAAA+AGG | + | Chr6:27253810-27253829 | MsG0680031816.01.T01:CDS | 45.0% | |
| CTGGTTTCTGATGGTTCTTC+TGG | + | Chr6:27254607-27254626 | MsG0680031816.01.T01:CDS | 45.0% | |
| CTTCTCCACATCTGTCCAAT+CGG | - | Chr6:27253951-27253970 | None:intergenic | 45.0% | |
| GAAGCCTAATTCAACTGCCA+AGG | + | Chr6:27255035-27255054 | MsG0680031816.01.T01:CDS | 45.0% | |
| GACTCACAAACGCATTGGAA+TGG | + | Chr6:27254075-27254094 | MsG0680031816.01.T01:CDS | 45.0% | |
| GAGTCTAAACTTGGCATGGA+TGG | + | Chr6:27254397-27254416 | MsG0680031816.01.T01:CDS | 45.0% | |
| GATACGTCAGGTTCCAAAAC+AGG | + | Chr6:27254214-27254233 | MsG0680031816.01.T01:CDS | 45.0% | |
| GCTTCAAGGAGATGAATTGG+AGG | + | Chr6:27254630-27254649 | MsG0680031816.01.T01:CDS | 45.0% | |
| GGAAAAGATAAGCCGAGTGA+AGG | + | Chr6:27254505-27254524 | MsG0680031816.01.T01:CDS | 45.0% | |
| GGCAGTTGAATTAGGCTTCT+GGG | - | Chr6:27255034-27255053 | None:intergenic | 45.0% | |
| GTCAACGGGAAAGTAGACAA+TGG | + | Chr6:27254334-27254353 | MsG0680031816.01.T01:CDS | 45.0% | |
| GTGAAATGGAGCTTACCGAT+TGG | + | Chr6:27253933-27253952 | MsG0680031816.01.T01:CDS | 45.0% | |
| TAACTATAGCACTCTGGTGC+TGG | - | Chr6:27254465-27254484 | None:intergenic | 45.0% | |
| TCAGGAAGTCAGTGAAAGCA+AGG | + | Chr6:27253834-27253853 | MsG0680031816.01.T01:CDS | 45.0% | |
| TGCAAGACTCACAAACGCAT+TGG | + | Chr6:27254070-27254089 | MsG0680031816.01.T01:CDS | 45.0% | |
| TGCTCTAATTCTGCTGCTGA+GGG | + | Chr6:27254580-27254599 | MsG0680031816.01.T01:CDS | 45.0% | |
| TGGCAGTTGAATTAGGCTTC+TGG | - | Chr6:27255035-27255054 | None:intergenic | 45.0% | |
| TGGGCTTCAAGGAGATGAAT+TGG | + | Chr6:27254627-27254646 | MsG0680031816.01.T01:CDS | 45.0% | |
| TGGTGAGTCTAAACTTGGCA+TGG | + | Chr6:27254393-27254412 | MsG0680031816.01.T01:CDS | 45.0% | |
| ! | AATCCAATCCTTTGGAAGCC+AGG | + | Chr6:27254278-27254297 | MsG0680031816.01.T01:CDS | 45.0% |
| ! | CCATCATGAGTTCTAGCCAT+GGG | + | Chr6:27255154-27255173 | MsG0680031816.01.T01:CDS | 45.0% |
| ! | GAGGTTTTTCCAGGCATAGT+TGG | - | Chr6:27254813-27254832 | None:intergenic | 45.0% |
| ! | GGTTTTTCCAGGCATAGTTG+GGG | - | Chr6:27254811-27254830 | None:intergenic | 45.0% |
| !! | CGAGTTGATAGAGATGAAGC+TGG | + | Chr6:27254667-27254686 | MsG0680031816.01.T01:CDS | 45.0% |
| !! | GCATTGATTGCACAGTGTGT+CGG | + | Chr6:27254013-27254032 | MsG0680031816.01.T01:CDS | 45.0% |
| !! | GGTGTCTTGTGCAGTTTTGA+TGG | + | Chr6:27254427-27254446 | MsG0680031816.01.T01:CDS | 45.0% |
| AATGCTCCCTATACGGGTGA+TGG | + | Chr6:27255216-27255235 | MsG0680031816.01.T01:CDS | 50.0% | |
| AGCTGGAGTTGTTGGATCAC+CGG | + | Chr6:27254114-27254133 | MsG0680031816.01.T01:CDS | 50.0% | |
| ATGCTCCCTATACGGGTGAT+GGG | + | Chr6:27255217-27255236 | MsG0680031816.01.T01:CDS | 50.0% | |
| CCCATGGCTAGAACTCATGA+TGG | - | Chr6:27255157-27255176 | None:intergenic | 50.0% | |
| CCTTGACCACAAGACAACAG+CGG | + | Chr6:27253391-27253410 | MsG0680031816.01.T01:CDS | 50.0% | |
| CGATTGGACAGATGTGGAGA+AGG | + | Chr6:27253949-27253968 | MsG0680031816.01.T01:CDS | 50.0% | |
| CTGCTCTAATTCTGCTGCTG+AGG | + | Chr6:27254579-27254598 | MsG0680031816.01.T01:CDS | 50.0% | |
| CTGTGAAAGGCAAAAGGGTC+AGG | + | Chr6:27253816-27253835 | MsG0680031816.01.T01:CDS | 50.0% | |
| CTTCTGGGTGGATGAAGGAA+TGG | - | Chr6:27255019-27255038 | None:intergenic | 50.0% | |
| GATCTCATGGGTGAAAGAGC+TGG | + | Chr6:27254097-27254116 | MsG0680031816.01.T01:CDS | 50.0% | |
| GATGGTTCTTCTGGGCTTCA+AGG | + | Chr6:27254616-27254635 | MsG0680031816.01.T01:CDS | 50.0% | |
| GCAGCAGAATTAGAGCAGCA+TGG | - | Chr6:27254577-27254596 | None:intergenic | 50.0% | |
| GCAGGAAGTGATGAGAAACG+AGG | - | Chr6:27255255-27255274 | None:intergenic | 50.0% | |
| GCATTCAGACCAAATGCAGC+AGG | - | Chr6:27255303-27255322 | None:intergenic | 50.0% | |
| GCGAGCAATATGGAAGAAGC+AGG | - | Chr6:27255273-27255292 | None:intergenic | 50.0% | |
| GGTGAAAGAGCTGGAGTTGT+TGG | + | Chr6:27254106-27254125 | MsG0680031816.01.T01:CDS | 50.0% | |
| GTGTTCCCATCACCCGTATA+GGG | - | Chr6:27255225-27255244 | None:intergenic | 50.0% | |
| GTTCCTGGCTTCCAAAGGAT+TGG | - | Chr6:27254284-27254303 | None:intergenic | 50.0% | |
| TCTCGTCGGAACAGCTTTCT+TGG | - | Chr6:27253907-27253926 | None:intergenic | 50.0% | |
| TGTGTTCCCATCACCCGTAT+AGG | - | Chr6:27255226-27255245 | None:intergenic | 50.0% | |
| TTAGGCTTCTGGGTGGATGA+AGG | - | Chr6:27255024-27255043 | None:intergenic | 50.0% | |
| TTCAGGACGTTCCCTATGGA+GGG | + | Chr6:27253616-27253635 | MsG0680031816.01.T01:CDS | 50.0% | |
| TTTGAGGGCAGCTTCAGTGA+CGG | + | Chr6:27253562-27253581 | MsG0680031816.01.T01:CDS | 50.0% | |
| ! | ATGATGATGTGGATGGTGGC+AGG | + | Chr6:27254140-27254159 | MsG0680031816.01.T01:CDS | 50.0% |
| ! | CCCATCATGAGTTCTAGCCA+TGG | + | Chr6:27255153-27255172 | MsG0680031816.01.T01:CDS | 50.0% |
| ! | CTGACCCTTTTGCCTTTCAC+AGG | - | Chr6:27253818-27253837 | None:intergenic | 50.0% |
| ! | CTTGGCATGGATGGTAATGC+AGG | + | Chr6:27254406-27254425 | MsG0680031816.01.T01:CDS | 50.0% |
| ! | GCGAAGTATCCTGCTGCATT+TGG | + | Chr6:27255291-27255310 | MsG0680031816.01.T01:CDS | 50.0% |
| ! | GCTTACCGATTGGACAGATG+TGG | + | Chr6:27253943-27253962 | MsG0680031816.01.T01:CDS | 50.0% |
| ! | TAAGTTGGCTGACAGGTTCC+TGG | - | Chr6:27254299-27254318 | None:intergenic | 50.0% |
| ! | TCCTGAGTGGTGACTTGCAT+CGG | - | Chr6:27253878-27253897 | None:intergenic | 50.0% |
| !! | CTTGTGCAGTTTTGATGGGC+CGG | + | Chr6:27254432-27254451 | MsG0680031816.01.T01:CDS | 50.0% |
| !! | GAGGGTAGACTGGTTTCTGA+TGG | + | Chr6:27254598-27254617 | MsG0680031816.01.T01:CDS | 50.0% |
| !! | GCCAATGGTTCTGATACGTC+AGG | + | Chr6:27254202-27254221 | MsG0680031816.01.T01:CDS | 50.0% |
| !! | GGAGCATTGAAATCCGGAAG+TGG | - | Chr6:27255204-27255223 | None:intergenic | 50.0% |
| !! | GGGAGGTGCTGTTACAGAAT+TGG | + | Chr6:27254528-27254547 | MsG0680031816.01.T01:CDS | 50.0% |
| !! | GGGCATTGAAATCAATGCCC+TGG | - | Chr6:27255134-27255153 | None:intergenic | 50.0% |
| !! | TGGCTGGTCAACACCTGTTT+TGG | - | Chr6:27254230-27254249 | None:intergenic | 50.0% |
| !! | TTGTGCAGTTTTGATGGGCC+GGG | + | Chr6:27254433-27254452 | MsG0680031816.01.T01:CDS | 50.0% |
| CACAGTCCGCTGTTGTCTTG+TGG | - | Chr6:27253400-27253419 | None:intergenic | 55.0% | |
| CATTTCACCGCAGCTCTCGT+CGG | - | Chr6:27253921-27253940 | None:intergenic | 55.0% | |
| CCAGAGACAGCTTCAGCCAA+TGG | + | Chr6:27254187-27254206 | MsG0680031816.01.T01:CDS | 55.0% | |
| CCATCCACATCATCATCCCC+CGG | - | Chr6:27254136-27254155 | None:intergenic | 55.0% | |
| CCGCTGTTGTCTTGTGGTCA+AGG | - | Chr6:27253394-27253413 | None:intergenic | 55.0% | |
| CTGGAGTTGTTGGATCACCG+GGG | + | Chr6:27254116-27254135 | MsG0680031816.01.T01:CDS | 55.0% | |
| GACAGGTTCCTGGCTTCCAA+AGG | - | Chr6:27254289-27254308 | None:intergenic | 55.0% | |
| GACGACATGCGGAGAGCAAA+TGG | + | Chr6:27255339-27255358 | MsG0680031816.01.T01:CDS | 55.0% | |
| GCCTGCATTCTCACCACTTC+CGG | + | Chr6:27255188-27255207 | MsG0680031816.01.T01:CDS | 55.0% | |
| GCTGGAGTTGTTGGATCACC+GGG | + | Chr6:27254115-27254134 | MsG0680031816.01.T01:CDS | 55.0% | |
| GTTCAGGACGTTCCCTATGG+AGG | + | Chr6:27253615-27253634 | MsG0680031816.01.T01:CDS | 55.0% | |
| TCAGGACGTTCCCTATGGAG+GGG | + | Chr6:27253617-27253636 | MsG0680031816.01.T01:CDS | 55.0% | |
| TCCGATGCAAGTCACCACTC+AGG | + | Chr6:27253874-27253893 | MsG0680031816.01.T01:CDS | 55.0% | |
| TCCGGAAGTGGTGAGAATGC+AGG | - | Chr6:27255192-27255211 | None:intergenic | 55.0% | |
| TGCGTTCAGGACGTTCCCTA+TGG | + | Chr6:27253612-27253631 | MsG0680031816.01.T01:CDS | 55.0% | |
| TGGAGTTGTTGGATCACCGG+GGG | + | Chr6:27254117-27254136 | MsG0680031816.01.T01:CDS | 55.0% | |
| TTCTGCTGCTGAGGGTAGAC+TGG | + | Chr6:27254588-27254607 | MsG0680031816.01.T01:CDS | 55.0% | |
| ! | ATCACCGGGGGATGATGATG+TGG | + | Chr6:27254129-27254148 | MsG0680031816.01.T01:CDS | 55.0% |
| ! | CCATTGGCTGAAGCTGTCTC+TGG | - | Chr6:27254190-27254209 | None:intergenic | 55.0% |
| ! | GGGGATGATGATGTGGATGG+TGG | + | Chr6:27254136-27254155 | MsG0680031816.01.T01:CDS | 55.0% |
| ! | TGAGTGGTGACTTGCATCGG+AGG | - | Chr6:27253875-27253894 | None:intergenic | 55.0% |
| !! | TGGGCTGGTTGAAGATCCTC+TGG | + | Chr6:27253259-27253278 | MsG0680031816.01.T01:CDS | 55.0% |
| ACAGCACCTCCCCCTTCACT+CGG | - | Chr6:27254520-27254539 | None:intergenic | 60.0% | |
| AGCTGTTCCGACGAGAGCTG+CGG | + | Chr6:27253911-27253930 | MsG0680031816.01.T01:CDS | 60.0% | |
| ATGGAGGAACTCGCTGCCTC+AGG | - | Chr6:27253779-27253798 | None:intergenic | 60.0% | |
| CAGGCTGTACTGTGCTCCCA+TGG | - | Chr6:27255173-27255192 | None:intergenic | 60.0% | |
| CGACGAGAGCTGCGGTGAAA+TGG | + | Chr6:27253919-27253938 | MsG0680031816.01.T01:CDS | 60.0% | |
| GATAAGCCGAGTGAAGGGGG+AGG | + | Chr6:27254511-27254530 | MsG0680031816.01.T01:CDS | 60.0% | |
| GCAGCTTCAGTGACGGCAGA+TGG | + | Chr6:27253569-27253588 | MsG0680031816.01.T01:CDS | 60.0% | |
| ! | CCGGGGGATGATGATGTGGA+TGG | + | Chr6:27254133-27254152 | MsG0680031816.01.T01:CDS | 60.0% |
| ! | CTCTGGTGCTGGACAGTACC+CGG | - | Chr6:27254454-27254473 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 27253242 | 27255392 | 27253242 | ID=MsG0680031816.01;Name=MsG0680031816.01 |
| Chr6 | mRNA | 27253242 | 27255392 | 27253242 | ID=MsG0680031816.01.T01;Parent=MsG0680031816.01;Name=MsG0680031816.01.T01;_AED=0.42;_eAED=0.42;_QI=0|-1|0|1|-1|1|1|0|716 |
| Chr6 | exon | 27253242 | 27255392 | 27253242 | ID=MsG0680031816.01.T01:exon:8539;Parent=MsG0680031816.01.T01 |
| Chr6 | CDS | 27253242 | 27255392 | 27253242 | ID=MsG0680031816.01.T01:cds;Parent=MsG0680031816.01.T01 |
| Gene Sequence |
| Protein sequence |
