AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031952.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031952.01.T01 MTR_6g018930 96.703 364 7 1 1 364 1 359 0.0 727
MsG0680031952.01.T01 MTR_7g032640 56.300 373 113 4 1 358 1 338 1.14e-146 419
MsG0680031952.01.T01 MTR_7g017430 59.167 360 122 4 1 355 1 340 1.23e-145 417
MsG0680031952.01.T01 MTR_3g075410 59.116 362 121 6 1 358 1 339 7.20e-145 415
MsG0680031952.01.T01 MTR_8g037335 55.000 320 124 5 1 320 1 300 2.83e-111 328
MsG0680031952.01.T01 MTR_5g029210 58.929 280 103 2 1 280 1 268 1.96e-109 326
MsG0680031952.01.T01 MTR_4g125660 26.667 180 101 5 87 241 82 255 1.32e-11 65.1
MsG0680031952.01.T01 MTR_4g125660 26.667 180 101 5 87 241 82 255 1.43e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031952.01.T01 AT5G38220 70.055 364 81 4 1 364 1 336 0.0 511
MsG0680031952.01.T01 AT5G38220 70.055 364 81 4 1 364 1 336 0.0 511
MsG0680031952.01.T01 AT1G66900 71.678 286 65 1 1 286 1 270 1.32e-152 431
MsG0680031952.01.T01 AT4G24760 57.542 358 130 3 1 358 1 336 1.28e-145 417
MsG0680031952.01.T01 AT5G14390 57.895 361 117 5 1 358 1 329 5.11e-145 415
MsG0680031952.01.T01 AT3G01690 55.526 380 125 5 1 357 1 359 2.27e-144 413
MsG0680031952.01.T01 AT3G30380 54.974 382 134 6 1 362 1 364 1.48e-140 404
MsG0680031952.01.T01 AT3G30380 55.914 372 126 6 1 352 1 354 8.44e-140 403
MsG0680031952.01.T01 AT4G31020 61.429 280 91 1 1 280 1 263 9.90e-126 363
MsG0680031952.01.T01 AT4G31020 61.429 280 91 1 1 280 1 263 9.90e-126 363
MsG0680031952.01.T01 AT1G13610 50.556 360 157 5 1 358 1 341 2.02e-124 362
MsG0680031952.01.T01 AT2G24320 56.129 310 114 4 1 306 1 292 5.25e-124 359
MsG0680031952.01.T01 AT2G24320 55.776 303 112 4 8 306 1 285 3.14e-120 349
MsG0680031952.01.T01 AT5G38220 73.333 225 41 1 1 225 1 206 4.10e-118 342
MsG0680031952.01.T01 AT1G32190 58.633 278 107 1 1 278 1 270 1.95e-113 337
MsG0680031952.01.T01 AT1G13610 50.218 229 107 3 132 358 18 241 1.64e-74 231
MsG0680031952.01.T01 AT1G32190 66.216 148 50 0 131 278 38 185 5.46e-67 215
MsG0680031952.01.T01 AT5G20520 27.602 221 123 9 51 241 42 255 9.34e-13 68.6

Find 143 sgRNAs with CRISPR-Local

Find 527 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAATATCAAGGTTAAATT+TGG 0.106829 6:+30549095 None:intergenic
TTTCAGAATATTGATAAAAT+TGG 0.185085 6:-30550090 MsG0680031952.01.T01:intron
ACGGCTATCTAAACTGTTTC+TGG 0.191277 6:+30549344 None:intergenic
TCATGGAAATGCTGCTGATT+TGG 0.240573 6:-30555910 MsG0680031952.01.T01:CDS
ACTCTCAACCCCGACAAAAT+TGG 0.271360 6:+30550233 None:intergenic
CGCGTGAAGTTTGTTTGGTT+TGG 0.282918 6:+30556235 None:intergenic
CGAGATTTCTCTGGTTTGTT+TGG 0.284152 6:+30549303 None:intergenic
GGAGAAGAAAGGGGTTAGTT+TGG 0.287342 6:-30549251 MsG0680031952.01.T01:CDS
CCATTTGCAGTAGTTGGTTT+AGG 0.301079 6:+30549480 None:intergenic
GGTAACGAAGCTTTCGATTC+CGG 0.303961 6:-30556045 MsG0680031952.01.T01:CDS
CATGGAAATGCTGCTGATTT+GGG 0.311090 6:-30555909 MsG0680031952.01.T01:CDS
TTCTCCTTCATCGGAACTTC+CGG 0.316023 6:+30556026 None:intergenic
GCAACCATGGTAATTTGTTT+TGG 0.321056 6:-30548848 None:intergenic
GTGTCTGTACAAATTTCTTT+AGG 0.321791 6:+30549511 None:intergenic
ACCCTGTAAAACGGACATAT+TGG 0.325725 6:-30550205 MsG0680031952.01.T01:CDS
CAGATCATGTTGATAGGTTT+AGG 0.326627 6:-30549272 MsG0680031952.01.T01:CDS
GGCGGTGGAGGTGGTGGAGG+TGG 0.336634 6:+30556097 None:intergenic
TCACCCCGTATTGTTCCTTC+AGG 0.367696 6:+30550357 None:intergenic
CGTCTCAGAATTAATGTTAT+GGG 0.367996 6:-30555852 MsG0680031952.01.T01:CDS
CATGGTCAAATGTCCTGTTT+TGG 0.370656 6:-30550067 MsG0680031952.01.T01:CDS
ATATTGGTTTGATATTTATA+AGG 0.372086 6:-30550189 MsG0680031952.01.T01:intron
TTTAGGTGTTTAATGAACTC+TGG 0.374332 6:+30549528 None:intergenic
GGCGGTGGCGGTGGAGGTGG+TGG 0.378403 6:+30556091 None:intergenic
TTCTGCGGCGGCGGTGGCGG+TGG 0.379719 6:+30556082 None:intergenic
GTTTGTTGAAATGATTCTTA+AGG 0.379957 6:+30556288 None:intergenic
TGGATAAGACCAGATAATTC+AGG 0.392107 6:+30549208 None:intergenic
AAACTGTTTCTGGAAGCTTC+AGG 0.395568 6:+30549354 None:intergenic
TCGTCTCAGAATTAATGTTA+TGG 0.395877 6:-30555853 MsG0680031952.01.T01:CDS
GGCGGCGGTGGCGGTGGAGG+TGG 0.396280 6:+30556088 None:intergenic
CTTTATAATTTAAAATATCA+AGG 0.397549 6:+30549085 None:intergenic
TGCGGCGGCGGTGGCGGTGG+AGG 0.402224 6:+30556085 None:intergenic
CCACAGATCCAGCTCCTTTG+CGG 0.412175 6:-30549180 MsG0680031952.01.T01:three_prime_UTR
GATAGGTTTAGGAGAAGAAA+GGG 0.412852 6:-30549261 MsG0680031952.01.T01:CDS
GATGAACAATTGATATTGTA+TGG 0.413194 6:-30550332 MsG0680031952.01.T01:CDS
GGTGGCGGTGGAGGTGGTGG+AGG 0.413962 6:+30556094 None:intergenic
TCAAGCAAAGAATCAGAAAC+TGG 0.416754 6:-30549411 MsG0680031952.01.T01:CDS
GTGCTCATTCGAGATTTCTC+TGG 0.419922 6:+30549294 None:intergenic
AAATTGTATCCTGAATTATC+TGG 0.421826 6:-30549217 MsG0680031952.01.T01:three_prime_UTR
GGCATCATTGCACGAGGAGC+TGG 0.423641 6:+30548973 None:intergenic
TCGGAACCATTTGCAGTAGT+TGG 0.425330 6:+30549474 None:intergenic
GTGTAGGATGGTGGTTGTGG+TGG 0.425455 6:+30556137 None:intergenic
TGATAGGTTTAGGAGAAGAA+AGG 0.429077 6:-30549262 MsG0680031952.01.T01:CDS
GTTACCGACCGTGTTGATGC+GGG 0.430154 6:-30549006 MsG0680031952.01.T01:three_prime_UTR
CCACACTTGACCTTGCTTCA+AGG 0.439617 6:-30550289 MsG0680031952.01.T01:CDS
TGAGCACAGATCATGTTGAT+AGG 0.443214 6:-30549278 MsG0680031952.01.T01:CDS
CTTACATGGATAACCAAAAC+AGG 0.445236 6:+30550054 None:intergenic
GGAATCGAAAGCTTCGTTAC+CGG 0.445386 6:+30556047 None:intergenic
AAATTTGGACCGCCCCATCT+TGG 0.445859 6:+30549110 None:intergenic
CCTAAACCAACTACTGCAAA+TGG 0.453101 6:-30549480 MsG0680031952.01.T01:CDS
TGTACCATGCTTTATTCTCA+TGG 0.453831 6:-30555927 MsG0680031952.01.T01:CDS
GATTCCGGAAGTTCCGATGA+AGG 0.459283 6:-30556030 MsG0680031952.01.T01:CDS
GGTGGCGCGTGAAGTTTGTT+TGG 0.460467 6:+30556230 None:intergenic
AATCTCGACCGCAAAGGAGC+TGG 0.463626 6:+30549172 None:intergenic
AGCGAACTTTGCAGCTATTG+AGG 0.466467 6:+30556166 None:intergenic
TAAAGCAATATGCATTTGTA+TGG 0.466495 6:-30548902 MsG0680031952.01.T01:three_prime_UTR
CAATATATTCATCTTCCAAC+AGG 0.467145 6:+30548952 None:intergenic
AGTGTGTAGGATGGTGGTTG+TGG 0.468402 6:+30556134 None:intergenic
TAGTGGTCGTTCGATCTAAT+CGG 0.469758 6:+30549031 None:intergenic
GAGCTGGATCTGTGGAATAG+TGG 0.470101 6:+30549188 None:intergenic
TTAGGTGTTTAATGAACTCT+GGG 0.485862 6:+30549529 None:intergenic
GCCACCGCCGCCGCAGAAAA+CGG 0.494053 6:-30556077 MsG0680031952.01.T01:CDS
TGTTCTGACTGCGTGAATGC+GGG 0.495420 6:+30549148 None:intergenic
TCTGGCTACGGACAGTCGAC+AGG 0.497808 6:-30553852 MsG0680031952.01.T01:CDS
TATGAACCCTTGTGGGTAAG+TGG 0.501164 6:-30549579 MsG0680031952.01.T01:CDS
GGTGGTTGTACGACCAAGAT+GGG 0.504473 6:-30549123 MsG0680031952.01.T01:three_prime_UTR
TGTAGGATGGTGGTTGTGGT+GGG 0.504481 6:+30556138 None:intergenic
AAATGCCTGAAGGAACAATA+CGG 0.508399 6:-30550362 MsG0680031952.01.T01:CDS
GTGAAGGTGAAAACAAGAAG+AGG 0.509873 6:-30555993 MsG0680031952.01.T01:CDS
TACTGCAAATGGTTCCGAAA+AGG 0.510277 6:-30549469 MsG0680031952.01.T01:CDS
ACATCCACGTTCTCCTTCAT+CGG 0.512503 6:+30556017 None:intergenic
AAGAAATTTGTACAGACACT+TGG 0.516658 6:-30549507 MsG0680031952.01.T01:CDS
CGGTGGTTGTACGACCAAGA+TGG 0.517196 6:-30549124 MsG0680031952.01.T01:three_prime_UTR
TGTTACCGACCGTGTTGATG+CGG 0.518487 6:-30549007 MsG0680031952.01.T01:three_prime_UTR
CCCTTGTGGGTAAGTGGAGG+TGG 0.520672 6:-30549573 MsG0680031952.01.T01:CDS
GGTAAAGTATGAACCCTTGT+GGG 0.522785 6:-30549586 MsG0680031952.01.T01:CDS
TGTCCCATGGAAAACAGCTA+TGG 0.527028 6:-30549620 MsG0680031952.01.T01:CDS
GAGTACTATACCCTGTAAAA+CGG 0.536738 6:-30550214 MsG0680031952.01.T01:CDS
CGCAGAAAACGGTACTTCAC+CGG 0.537592 6:-30556066 MsG0680031952.01.T01:CDS
ATATTGTATGGTCAATCCGT+TGG 0.544622 6:-30550320 MsG0680031952.01.T01:CDS
AATGCCTGAAGGAACAATAC+GGG 0.546260 6:-30550361 MsG0680031952.01.T01:CDS
TGAGGAAGTTACTCCGCCCA+TGG 0.549032 6:+30556184 None:intergenic
AGAAGAAAGAAACTGTTCAA+TGG 0.554028 6:+30556395 None:intergenic
TTTGCCAGTTACGATTACTC+TGG 0.554706 6:-30553870 MsG0680031952.01.T01:intron
AACACGGTCGGTAACAATAG+TGG 0.556342 6:+30549014 None:intergenic
CCTCGTGCAATGATGCCTGT+TGG 0.561223 6:-30548967 MsG0680031952.01.T01:three_prime_UTR
AAGTGTGGGACCGCTGCCAA+CGG 0.563321 6:+30550304 None:intergenic
TGGATTTGAAGAGTGAAAAG+TGG 0.564261 6:+30556255 None:intergenic
GAGGAAGTTACTCCGCCCAT+GGG 0.564502 6:+30556185 None:intergenic
TATGGTCAATCCGTTGGCAG+CGG 0.565164 6:-30550314 MsG0680031952.01.T01:CDS
TGAAGGTGAAAACAAGAAGA+GGG 0.565452 6:-30555992 MsG0680031952.01.T01:CDS
CCTTGAAGCAAGGTCAAGTG+TGG 0.568843 6:+30550289 None:intergenic
GAATATTGATAAAATTGGCA+TGG 0.570904 6:-30550085 MsG0680031952.01.T01:CDS
ACAGCTATGGGAACTTTGCA+AGG 0.582110 6:-30549607 MsG0680031952.01.T01:CDS
GAATAAAGCATGGTACATGC+AGG 0.585350 6:+30555933 None:intergenic
ATAGGTTTAGGAGAAGAAAG+GGG 0.589775 6:-30549260 MsG0680031952.01.T01:CDS
CCGCAAAGGAGCTGGATCTG+TGG 0.594141 6:+30549180 None:intergenic
GGTGGAGGTGGATTCAGATA+CGG 0.594745 6:+30556109 None:intergenic
CTATGAATCAACCTCCCCAT+GGG 0.596237 6:-30556200 MsG0680031952.01.T01:exon
TCTATGAATCAACCTCCCCA+TGG 0.599085 6:-30556201 MsG0680031952.01.T01:exon
GGGAGGTTGATTCATAGAGA+TGG 0.604510 6:+30556206 None:intergenic
CTGGCTACGGACAGTCGACA+GGG 0.608648 6:-30553851 MsG0680031952.01.T01:CDS
GCGTACGTATTATATTCAGT+TGG 0.611689 6:+30550404 None:intergenic
GTCCCATGGAAAACAGCTAT+GGG 0.613275 6:-30549619 MsG0680031952.01.T01:CDS
GGAGAACGTGGATGTAGTGA+AGG 0.613495 6:-30556009 MsG0680031952.01.T01:CDS
AAGTTACTCCGCCCATGGGG+AGG 0.615234 6:+30556189 None:intergenic
GTCTCAGAATTAATGTTATG+GGG 0.618285 6:-30555851 MsG0680031952.01.T01:intron
AGGTAAAGTATGAACCCTTG+TGG 0.618886 6:-30549587 MsG0680031952.01.T01:CDS
TGATCTAGTAAATGCAACCA+TGG 0.624234 6:-30548861 MsG0680031952.01.T01:three_prime_UTR
AGTTACGATTACTCTGGCTA+CGG 0.626545 6:-30553864 MsG0680031952.01.T01:CDS
ATGTTCTGACTGCGTGAATG+CGG 0.627342 6:+30549147 None:intergenic
TTACCGACCGTGTTGATGCG+GGG 0.627491 6:-30549005 MsG0680031952.01.T01:three_prime_UTR
CTACGGACAGTCGACAGGGA+AGG 0.629086 6:-30553847 MsG0680031952.01.T01:intron
ACGGTGAGTGTGTAGGATGG+TGG 0.631180 6:+30556128 None:intergenic
TCCACCTCCACTTACCCACA+AGG 0.631987 6:+30549572 None:intergenic
AGCTGCATATAAATGCCTGA+AGG 0.634850 6:-30550372 MsG0680031952.01.T01:CDS
GCGGGGAATCTCGACCGCAA+AGG 0.637942 6:+30549166 None:intergenic
TTGATTCATAGAGATGGCGG+TGG 0.644287 6:+30556212 None:intergenic
TGAATCAACCTCCCCATGGG+CGG 0.645335 6:-30556197 MsG0680031952.01.T01:exon
ATTCTGATATCCTTGAAGCA+AGG 0.650913 6:+30550279 None:intergenic
CTTGAAGCAAGGTCAAGTGT+GGG 0.653272 6:+30550290 None:intergenic
TCTACCAAAACAAATTACCA+TGG 0.655465 6:+30548844 None:intergenic
AGTTCCGATGAAGGAGAACG+TGG 0.663164 6:-30556021 MsG0680031952.01.T01:CDS
GTTGTACGACCAAGATGGGG+CGG 0.668637 6:-30549119 MsG0680031952.01.T01:three_prime_UTR
AAGAAGAGGGAATGAAATCG+TGG 0.673015 6:-30555979 MsG0680031952.01.T01:CDS
GTTCTGACTGCGTGAATGCG+GGG 0.675680 6:+30549149 None:intergenic
AAACCCCGCATCAACACGGT+CGG 0.678984 6:+30549002 None:intergenic
GAAGTTGTAGATGTGTCCCA+TGG 0.679447 6:-30549633 MsG0680031952.01.T01:CDS
GATACGGTGAGTGTGTAGGA+TGG 0.681650 6:+30556125 None:intergenic
TCAAGGATATCAGAATTGAG+AGG 0.684211 6:-30550272 MsG0680031952.01.T01:CDS
CCAACAGGCATCATTGCACG+AGG 0.685556 6:+30548967 None:intergenic
TCACGCAGTCAGAACATCGG+TGG 0.688910 6:-30549141 MsG0680031952.01.T01:three_prime_UTR
GGTCGTTCGATCTAATCGGA+CGG 0.691217 6:+30549035 None:intergenic
GTGGTTGTACGACCAAGATG+GGG 0.692977 6:-30549122 MsG0680031952.01.T01:three_prime_UTR
TTCAGATACGGTGAGTGTGT+AGG 0.695569 6:+30556121 None:intergenic
TCAGAAACCCCGCATCAACA+CGG 0.697193 6:+30548998 None:intergenic
ATTTCCATGAGAATAAAGCA+TGG 0.702446 6:+30555923 None:intergenic
AGGTTGATTCATAGAGATGG+CGG 0.704398 6:+30556209 None:intergenic
CCACCTCCACTTACCCACAA+GGG 0.707721 6:+30549573 None:intergenic
ATGCCTGAAGGAACAATACG+GGG 0.708481 6:-30550360 MsG0680031952.01.T01:CDS
GAACCCTTGTGGGTAAGTGG+AGG 0.709321 6:-30549576 MsG0680031952.01.T01:CDS
CATTCACGCAGTCAGAACAT+CGG 0.715316 6:-30549144 MsG0680031952.01.T01:three_prime_UTR
AGGAAGTTACTCCGCCCATG+GGG 0.719382 6:+30556186 None:intergenic
AAGAGGGAATGAAATCGTGG+CGG 0.757446 6:-30555976 MsG0680031952.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATGATTGAATAAAT+AGG + Chr6:30555538-30555557 None:intergenic 10.0%
!!! CTTATGATTAATTTTTTTTT+TGG - Chr6:30549550-30549569 MsG0680031952.01.T01:CDS 10.0%
!!! CTTTATAATTTAAAATATCA+AGG + Chr6:30556178-30556197 None:intergenic 10.0%
!!! TTTTTTTATATTTTGCTTAT+TGG - Chr6:30551091-30551110 MsG0680031952.01.T01:intron 10.0%
!!! TTTTTTTTTCTTTTTCTTTT+TGG - Chr6:30550446-30550465 MsG0680031952.01.T01:intron 10.0%
!!! TTTTTTTTTTTGCAATAATT+GGG - Chr6:30550001-30550020 MsG0680031952.01.T01:intron 10.0%
!!! TTTTTTTTTTTTGCAATAAT+TGG - Chr6:30550000-30550019 MsG0680031952.01.T01:intron 10.0%
!! CTTATGATTAATTAAGTAAA+AGG - Chr6:30549581-30549600 MsG0680031952.01.T01:CDS 15.0%
!! TAAAATATCAAGGTTAAATT+TGG + Chr6:30556168-30556187 None:intergenic 15.0%
!! TGAATATTTATTAATTGATG+TGG + Chr6:30549795-30549814 None:intergenic 15.0%
!! TTTCAGAATATTGATAAAAT+TGG - Chr6:30555170-30555189 MsG0680031952.01.T01:intron 15.0%
!!! ACTTTTCAAAATGATTTAAA+AGG - Chr6:30553633-30553652 MsG0680031952.01.T01:intron 15.0%
!!! ATATTGGTTTGATATTTATA+AGG - Chr6:30555071-30555090 MsG0680031952.01.T01:intron 15.0%
!!! CATAATAGTATTTAAAACAT+CGG + Chr6:30554766-30554785 None:intergenic 15.0%
!!! TAATGTAATAATTTTATGCT+TGG - Chr6:30550702-30550721 MsG0680031952.01.T01:intron 15.0%
!!! TTAAAGTTAAGATCTAAAAT+GGG - Chr6:30550195-30550214 MsG0680031952.01.T01:CDS 15.0%
!!! TTATAAATTTGTTTGAGAAT+TGG + Chr6:30554057-30554076 None:intergenic 15.0%
!!! TTTAAAGTTAAGATCTAAAA+TGG - Chr6:30550194-30550213 MsG0680031952.01.T01:CDS 15.0%
!! AAAAATTGCAACACAATTAT+AGG + Chr6:30552628-30552647 None:intergenic 20.0%
!! AAAAGAACATTACATATTTG+GGG + Chr6:30555259-30555278 None:intergenic 20.0%
!! AAAATTGCAACACAATTATA+GGG + Chr6:30552627-30552646 None:intergenic 20.0%
!! AAATTAGTTATTACGATGTT+AGG + Chr6:30551855-30551874 None:intergenic 20.0%
!! AAATTTATTACCTCTAAATC+AGG + Chr6:30550166-30550185 None:intergenic 20.0%
!! AACTAATTTATGAATGAAGA+AGG - Chr6:30551866-30551885 MsG0680031952.01.T01:intron 20.0%
!! AAGTTTATATTGTGTGATTT+AGG - Chr6:30552125-30552144 MsG0680031952.01.T01:intron 20.0%
!! ACAAATTATTAACCAATAGT+TGG + Chr6:30553668-30553687 None:intergenic 20.0%
!! ATAATACTCAAGTATTATAC+CGG - Chr6:30554207-30554226 MsG0680031952.01.T01:intron 20.0%
!! CAAAAGAACATTACATATTT+GGG + Chr6:30555260-30555279 None:intergenic 20.0%
!! CAAATTATTAACCAATAGTT+GGG + Chr6:30553667-30553686 None:intergenic 20.0%
!! CTAGAGAATTTCTAAATATA+GGG + Chr6:30553423-30553442 None:intergenic 20.0%
!! GATTATATATGATGATCATA+TGG - Chr6:30550025-30550044 MsG0680031952.01.T01:intron 20.0%
!! GGAAAAAAAAAAAAAAATCG+TGG + Chr6:30554419-30554438 None:intergenic 20.0%
!! GGTTTATATAAGAAATTCAT+CGG + Chr6:30552542-30552561 None:intergenic 20.0%
!! GTAAAATATAATTCCTTATG+TGG - Chr6:30551777-30551796 MsG0680031952.01.T01:intron 20.0%
!! GTAAAGAATGAATGATATAT+TGG + Chr6:30551148-30551167 None:intergenic 20.0%
!! GTTTATATAAGAAATTCATC+GGG + Chr6:30552541-30552560 None:intergenic 20.0%
!! TATACTTATAACTTACCTTA+TGG - Chr6:30550364-30550383 MsG0680031952.01.T01:CDS 20.0%
!! TATATAAACCCCTATAAATT+GGG - Chr6:30552552-30552571 MsG0680031952.01.T01:intron 20.0%
!! TCAAAAGAACATTACATATT+TGG + Chr6:30555261-30555280 None:intergenic 20.0%
!! TGTCAATCTTAAAGTAATAA+TGG - Chr6:30551238-30551257 MsG0680031952.01.T01:intron 20.0%
!! TTATATAAACCCCTATAAAT+TGG - Chr6:30552551-30552570 MsG0680031952.01.T01:intron 20.0%
!!! AAATATGTAATGTTCTTTTG+AGG - Chr6:30555260-30555279 MsG0680031952.01.T01:intron 20.0%
!!! AATAATTTTATGCTTGGAAT+TGG - Chr6:30550708-30550727 MsG0680031952.01.T01:intron 20.0%
!!! AGTTAAGTTTTTTCTGAAAA+AGG - Chr6:30553460-30553479 MsG0680031952.01.T01:intron 20.0%
!!! ATATTTTTTTGTCCAATATC+AGG - Chr6:30555593-30555612 MsG0680031952.01.T01:intron 20.0%
!!! GAGATAATTTAACTTTTTAC+TGG - Chr6:30550790-30550809 MsG0680031952.01.T01:intron 20.0%
!!! GTTTTTATAAAATAGCATTC+TGG + Chr6:30553139-30553158 None:intergenic 20.0%
!!! GTTTTTTAGACTTTTTAAGA+CGG + Chr6:30555938-30555957 None:intergenic 20.0%
!!! TACTATTATGTTGTTTATGA+CGG - Chr6:30554776-30554795 MsG0680031952.01.T01:intron 20.0%
!!! TATTTTTTTGTCCAATATCA+GGG - Chr6:30555594-30555613 MsG0680031952.01.T01:intron 20.0%
!!! TTTTAATGATTTGTTAGTTG+CGG - Chr6:30549605-30549624 MsG0680031952.01.T01:CDS 20.0%
!!! TTTTCAGAAAAAACTTAACT+TGG + Chr6:30553460-30553479 None:intergenic 20.0%
! AAACAAGTGTTTATAAGGAT+GGG - Chr6:30554346-30554365 MsG0680031952.01.T01:intron 25.0%
! AAACAGGTATATGTATTCAT+AGG + Chr6:30554440-30554459 None:intergenic 25.0%
! AAACATCTTAGCTGTATTAA+TGG + Chr6:30551476-30551495 None:intergenic 25.0%
! AAAGAAATTGCCCAATTTAT+AGG + Chr6:30552565-30552584 None:intergenic 25.0%
! AAAGAACATTACATATTTGG+GGG + Chr6:30555258-30555277 None:intergenic 25.0%
! AAATTGCAAAAAATTTGACC+CGG + Chr6:30552507-30552526 None:intergenic 25.0%
! AAATTGTATCCTGAATTATC+TGG - Chr6:30556043-30556062 MsG0680031952.01.T01:CDS 25.0%
! AAGAAATTGCCCAATTTATA+GGG + Chr6:30552564-30552583 None:intergenic 25.0%
! AATAAATCATGTTTGTGTGT+TGG + Chr6:30551821-30551840 None:intergenic 25.0%
! AATATTGATGTATGTATCAG+TGG - Chr6:30552818-30552837 MsG0680031952.01.T01:intron 25.0%
! AATGTTATTATATACGCTGA+TGG - Chr6:30554702-30554721 MsG0680031952.01.T01:intron 25.0%
! AATTACACTCGTAAACAAAA+AGG - Chr6:30549880-30549899 MsG0680031952.01.T01:intron 25.0%
! ACACACAAATATATAAAGGA+GGG + Chr6:30554244-30554263 None:intergenic 25.0%
! AGAATTTAATCAGTATACTC+TGG - Chr6:30549728-30549747 MsG0680031952.01.T01:intron 25.0%
! AGCAAAATAAGTTATAGTGT+TGG + Chr6:30554504-30554523 None:intergenic 25.0%
! ATAAAGGAAAAAACACTAGA+TGG + Chr6:30554476-30554495 None:intergenic 25.0%
! ATATGATGATCATATGGAAT+GGG - Chr6:30550031-30550050 MsG0680031952.01.T01:intron 25.0%
! ATCCTTATAAACACTTGTTT+AGG + Chr6:30554346-30554365 None:intergenic 25.0%
! ATTACACTCGTAAACAAAAA+GGG - Chr6:30549881-30549900 MsG0680031952.01.T01:intron 25.0%
! CATATTGAAATACAATCTGT+AGG + Chr6:30555106-30555125 None:intergenic 25.0%
! CCTAGAGAATTTCTAAATAT+AGG + Chr6:30553424-30553443 None:intergenic 25.0%
! CCTATATTTAGAAATTCTCT+AGG - Chr6:30553421-30553440 MsG0680031952.01.T01:intron 25.0%
! CTACAGATTGTATTTCAATA+TGG - Chr6:30555104-30555123 MsG0680031952.01.T01:intron 25.0%
! CTGATACATACATCAATATT+TGG + Chr6:30552818-30552837 None:intergenic 25.0%
! GAAACTGAAAAATAAATTGC+AGG - Chr6:30551594-30551613 MsG0680031952.01.T01:intron 25.0%
! GAATATTGATAAAATTGGCA+TGG - Chr6:30555175-30555194 MsG0680031952.01.T01:intron 25.0%
! GATGAACAATTGATATTGTA+TGG - Chr6:30554928-30554947 MsG0680031952.01.T01:intron 25.0%
! GTCATATTCATTAATTGATG+TGG - Chr6:30549823-30549842 MsG0680031952.01.T01:intron 25.0%
! TAAACAAGTGTTTATAAGGA+TGG - Chr6:30554345-30554364 MsG0680031952.01.T01:intron 25.0%
! TAAAGCAATATGCATTTGTA+TGG - Chr6:30556358-30556377 MsG0680031952.01.T01:five_prime_UTR 25.0%
! TAGGTCAAAAATCTGTTAAA+TGG + Chr6:30552364-30552383 None:intergenic 25.0%
! TATATGATGATCATATGGAA+TGG - Chr6:30550030-30550049 MsG0680031952.01.T01:intron 25.0%
! TATGATTCTCACAAGTTAAA+TGG + Chr6:30553032-30553051 None:intergenic 25.0%
! TATTAAAGAGAGTAGAGATT+TGG - Chr6:30550113-30550132 MsG0680031952.01.T01:intron 25.0%
! TGCTTATATTTCATTCAAGA+TGG - Chr6:30549961-30549980 MsG0680031952.01.T01:intron 25.0%
! TGGTGTATTTATAGTTAGTT+AGG + Chr6:30553012-30553031 None:intergenic 25.0%
! TTATAACATTCTTGGCATAT+AGG + Chr6:30552383-30552402 None:intergenic 25.0%
! TTATAAGTATAGTCATAGTC+TGG + Chr6:30550355-30550374 None:intergenic 25.0%
!! AGTGAGTTTTACTAGATAAT+GGG - Chr6:30553999-30554018 MsG0680031952.01.T01:intron 25.0%
!! ATAAGTTGACATATAAACGT+TGG - Chr6:30554073-30554092 MsG0680031952.01.T01:intron 25.0%
!! CTCATTTACAAGTTGAAAAA+AGG + Chr6:30554740-30554759 None:intergenic 25.0%
!! GTTTGTTGAAATGATTCTTA+AGG + Chr6:30548975-30548994 None:intergenic 25.0%
!! TAAGTTGACATATAAACGTT+GGG - Chr6:30554074-30554093 MsG0680031952.01.T01:intron 25.0%
!!! ATTGTCTTTATTTTAAGCTC+GGG - Chr6:30551029-30551048 MsG0680031952.01.T01:intron 25.0%
!!! GATTGTCTTTATTTTAAGCT+CGG - Chr6:30551028-30551047 MsG0680031952.01.T01:intron 25.0%
!!! TACATATACCTGTTTTGTTT+TGG - Chr6:30554445-30554464 MsG0680031952.01.T01:intron 25.0%
!!! TATAGTGTTGGCTAATATAA+AGG + Chr6:30554492-30554511 None:intergenic 25.0%
!!! TATTTTTGAGGTTTTACCAA+CGG - Chr6:30555389-30555408 MsG0680031952.01.T01:intron 25.0%
!!! TCTGTTTTTTTTAATGCTAG+TGG + Chr6:30552043-30552062 None:intergenic 25.0%
!!! TCTTGAATGTAAAGTATTGT+AGG + Chr6:30553562-30553581 None:intergenic 25.0%
!!! TTAACTTGTGAGAATCATAA+TGG - Chr6:30553033-30553052 MsG0680031952.01.T01:intron 25.0%
AAAAAGGAGGAAGTCAAAAA+AGG - Chr6:30553262-30553281 MsG0680031952.01.T01:intron 30.0%
AACACGATCCTTTATTATTC+TGG - Chr6:30554613-30554632 MsG0680031952.01.T01:intron 30.0%
AACATGTATCTTTATGACAG+AGG + Chr6:30551177-30551196 None:intergenic 30.0%
AAGAAATTTGTACAGACACT+TGG - Chr6:30555753-30555772 MsG0680031952.01.T01:intron 30.0%
AAGTTGACATATAAACGTTG+GGG - Chr6:30554075-30554094 MsG0680031952.01.T01:intron 30.0%
AATCATGATAAGATGCATGT+AGG + Chr6:30551534-30551553 None:intergenic 30.0%
ACGTTCAATAAATTTGGCAA+TGG + Chr6:30552241-30552260 None:intergenic 30.0%
ACTACATAGTAAAAGAACGA+AGG + Chr6:30551981-30552000 None:intergenic 30.0%
ACTGCTTCAAAAATAGTAAC+AGG + Chr6:30550951-30550970 None:intergenic 30.0%
AGAAATTGCCCAATTTATAG+GGG + Chr6:30552563-30552582 None:intergenic 30.0%
AGAAGAAAGAAACTGTTCAA+TGG + Chr6:30548868-30548887 None:intergenic 30.0%
AGCAAAAATGTCATGTGAAA+AGG + Chr6:30549945-30549964 None:intergenic 30.0%
AGCCTATTAAGAATACATAG+TGG - Chr6:30552892-30552911 MsG0680031952.01.T01:intron 30.0%
AGTTAGTTAGGTGAATAGTT+AGG + Chr6:30553000-30553019 None:intergenic 30.0%
ATATATTTGTGTGTGTGCAT+TGG - Chr6:30554250-30554269 MsG0680031952.01.T01:intron 30.0%
ATCGAACATTAGCATAAGTT+AGG - Chr6:30555493-30555512 MsG0680031952.01.T01:intron 30.0%
ATGAAACATAACATAGACAC+GGG + Chr6:30553517-30553536 None:intergenic 30.0%
ATTGAATTAGTGTTTGACCT+TGG - Chr6:30551551-30551570 MsG0680031952.01.T01:intron 30.0%
ATTTCAATTCCTATAGTAGG+TGG + Chr6:30552268-30552287 None:intergenic 30.0%
ATTTCATATCGTCGTAACAT+CGG - Chr6:30554180-30554199 MsG0680031952.01.T01:intron 30.0%
ATTTCCATGAGAATAAAGCA+TGG + Chr6:30549340-30549359 None:intergenic 30.0%
ATTTGGCAATGGCTAAATAT+TGG + Chr6:30552230-30552249 None:intergenic 30.0%
CAATATATTCATCTTCCAAC+AGG + Chr6:30556311-30556330 None:intergenic 30.0%
CAATTGACTAAATTGCATTC+AGG + Chr6:30551721-30551740 None:intergenic 30.0%
CACACACAAATATATAAAGG+AGG + Chr6:30554245-30554264 None:intergenic 30.0%
CATGAAACATAACATAGACA+CGG + Chr6:30553518-30553537 None:intergenic 30.0%
CGTAATGTTACAAGAGAATT+CGG - Chr6:30550615-30550634 MsG0680031952.01.T01:intron 30.0%
CGTCTCAGAATTAATGTTAT+GGG - Chr6:30549408-30549427 MsG0680031952.01.T01:CDS 30.0%
CTACATAGTAAAAGAACGAA+GGG + Chr6:30551980-30551999 None:intergenic 30.0%
CTCTCAATTAATAGTGTGTT+TGG - Chr6:30555342-30555361 MsG0680031952.01.T01:intron 30.0%
CTGTCATAAAGATACATGTT+TGG - Chr6:30551177-30551196 MsG0680031952.01.T01:intron 30.0%
GCACACACACAAATATATAA+AGG + Chr6:30554248-30554267 None:intergenic 30.0%
GCATAACAATTCAACTCAAA+TGG - Chr6:30554104-30554123 MsG0680031952.01.T01:intron 30.0%
GCGAATCTTTATAACATTCT+TGG + Chr6:30552391-30552410 None:intergenic 30.0%
GGGTTTATGATAGAATAGTA+TGG - Chr6:30550215-30550234 MsG0680031952.01.T01:CDS 30.0%
GGTCATAACCAGAATAATAA+AGG + Chr6:30554624-30554643 None:intergenic 30.0%
GTAATGTTACAAGAGAATTC+GGG - Chr6:30550616-30550635 MsG0680031952.01.T01:intron 30.0%
GTCCACTATGTATTCTTAAT+AGG + Chr6:30552897-30552916 None:intergenic 30.0%
GTCTCAGAATTAATGTTATG+GGG - Chr6:30549409-30549428 MsG0680031952.01.T01:CDS 30.0%
GTGAAAATTAAACCGAAGAA+AGG - Chr6:30552725-30552744 MsG0680031952.01.T01:intron 30.0%
GTGCTATAATTCATCTAAAC+AGG + Chr6:30550878-30550897 None:intergenic 30.0%
GTGTCTGTACAAATTTCTTT+AGG + Chr6:30555752-30555771 None:intergenic 30.0%
GTTTGGAAATTCATTGGATT+TGG - Chr6:30555359-30555378 MsG0680031952.01.T01:intron 30.0%
TACACTGACAGTGTAAAAAT+TGG - Chr6:30549486-30549505 MsG0680031952.01.T01:CDS 30.0%
TACATAGTAAAAGAACGAAG+GGG + Chr6:30551979-30551998 None:intergenic 30.0%
TAGTGTGTTTGGAAATTCAT+TGG - Chr6:30555353-30555372 MsG0680031952.01.T01:intron 30.0%
TATATTTGTGTGTGTGCATT+GGG - Chr6:30554251-30554270 MsG0680031952.01.T01:intron 30.0%
TCATAAAGATACATGTTTGG+TGG - Chr6:30551180-30551199 MsG0680031952.01.T01:intron 30.0%
TCGAACATTAGCATAAGTTA+GGG - Chr6:30555494-30555513 MsG0680031952.01.T01:intron 30.0%
TCGTCTCAGAATTAATGTTA+TGG - Chr6:30549407-30549426 MsG0680031952.01.T01:CDS 30.0%
TGCATTTCAATTCCTATAGT+AGG + Chr6:30552271-30552290 None:intergenic 30.0%
TGCTGTCTTTGTTCATTAAT+TGG - Chr6:30550058-30550077 MsG0680031952.01.T01:intron 30.0%
TTAGGTGTTTAATGAACTCT+GGG + Chr6:30555734-30555753 None:intergenic 30.0%
TTGTGCGTTAACTATGATTT+CGG - Chr6:30554676-30554695 MsG0680031952.01.T01:intron 30.0%
TTTAGGTGTTTAATGAACTC+TGG + Chr6:30555735-30555754 None:intergenic 30.0%
TTTCACTCAAGTTAGTACAT+GGG + Chr6:30552711-30552730 None:intergenic 30.0%
! AAGCATCACAAAGCTTTATA+TGG + Chr6:30552794-30552813 None:intergenic 30.0%
! AGTCCAAAATGCATTTTGTT+TGG - Chr6:30552323-30552342 MsG0680031952.01.T01:intron 30.0%
! GAGTGAGTTTTACTAGATAA+TGG - Chr6:30553998-30554017 MsG0680031952.01.T01:intron 30.0%
! TAAATATAGGGTCGCATTTT+TGG + Chr6:30553411-30553430 None:intergenic 30.0%
! TGGTGCATCAATTTTCTTTT+AGG - Chr6:30555313-30555332 MsG0680031952.01.T01:intron 30.0%
! TTATTCTGGTTATGACCATT+AGG - Chr6:30554627-30554646 MsG0680031952.01.T01:intron 30.0%
! TTTTCACTCAAGTTAGTACA+TGG + Chr6:30552712-30552731 None:intergenic 30.0%
!! AATAAAGGATCGTGTTTTAG+TGG + Chr6:30554609-30554628 None:intergenic 30.0%
!! ATGCTTTTAGGGATTGAAAA+TGG + Chr6:30553806-30553825 None:intergenic 30.0%
!! ATGGAACAAATGCTTTAAAG+AGG - Chr6:30550768-30550787 MsG0680031952.01.T01:intron 30.0%
!! ATTGGTAATTGTGACTTTTG+TGG - Chr6:30550726-30550745 MsG0680031952.01.T01:intron 30.0%
!! GTCCAAAATGCATTTTGTTT+GGG - Chr6:30552324-30552343 MsG0680031952.01.T01:intron 30.0%
!! TGGTGTTATATCATTAGCTT+AGG - Chr6:30551111-30551130 MsG0680031952.01.T01:intron 30.0%
!!! ATTGACTTTTTTTAAACCCG+TGG + Chr6:30553941-30553960 None:intergenic 30.0%
!!! CAATCCCTAAAAGCATTTTT+GGG - Chr6:30553810-30553829 MsG0680031952.01.T01:intron 30.0%
!!! GATCAAGATGTTGATTTTAC+AGG + Chr6:30556384-30556403 None:intergenic 30.0%
!!! TCAATCCCTAAAAGCATTTT+TGG - Chr6:30553809-30553828 MsG0680031952.01.T01:intron 30.0%
!!! TGGTTTTGAACTTCTGATTA+TGG - Chr6:30550749-30550768 MsG0680031952.01.T01:intron 30.0%
!!! TGTTGCAATTTTTTTTTGCC+CGG - Chr6:30552635-30552654 MsG0680031952.01.T01:intron 30.0%
!!! TTGTCTTTATTTTAAGCTCG+GGG - Chr6:30551030-30551049 MsG0680031952.01.T01:intron 30.0%
!!! TTTATTTTGTGTTAACCCTC+TGG + Chr6:30550426-30550445 None:intergenic 30.0%
!!! TTTGGTCAAGCTTATTTTTG+AGG - Chr6:30555377-30555396 MsG0680031952.01.T01:intron 30.0%
AAAACAGATGCTTGATCCTA+TGG - Chr6:30552055-30552074 MsG0680031952.01.T01:intron 35.0%
AAATGCCTGAAGGAACAATA+CGG - Chr6:30554898-30554917 MsG0680031952.01.T01:intron 35.0%
AACATTACATATTTGGGGGA+GGG + Chr6:30555254-30555273 None:intergenic 35.0%
AAGGAAAAAACACTAGATGG+TGG + Chr6:30554473-30554492 None:intergenic 35.0%
AATTGATGCACCAACAACAA+AGG + Chr6:30555306-30555325 None:intergenic 35.0%
AATTTGATCGAAAGCTTCCA+AGG + Chr6:30551571-30551590 None:intergenic 35.0%
ACAAATCATGGTAGGTCAAA+TGG - Chr6:30553239-30553258 MsG0680031952.01.T01:intron 35.0%
ACAAGAGAATTCGGGATAAA+CGG - Chr6:30550624-30550643 MsG0680031952.01.T01:intron 35.0%
AGATTGTAGACTGCATAACA+TGG - Chr6:30553579-30553598 MsG0680031952.01.T01:intron 35.0%
AGTTCAATTCACTCAACATC+AGG + Chr6:30550975-30550994 None:intergenic 35.0%
ATAAAATAGCATTCTGGCAG+AGG + Chr6:30553133-30553152 None:intergenic 35.0%
ATAGGTTTAGGAGAAGAAAG+GGG - Chr6:30556000-30556019 MsG0680031952.01.T01:CDS 35.0%
ATATTGTATGGTCAATCCGT+TGG - Chr6:30554940-30554959 MsG0680031952.01.T01:intron 35.0%
ATATTTGTGTGTGTGCATTG+GGG - Chr6:30554252-30554271 MsG0680031952.01.T01:intron 35.0%
ATGCTTGACTCAAATTCTGT+GGG + Chr6:30553850-30553869 None:intergenic 35.0%
ATGGTAGGTCAAATGGAAAA+AGG - Chr6:30553246-30553265 MsG0680031952.01.T01:intron 35.0%
ATTAAACCGAAGAAAGGCTT+TGG - Chr6:30552731-30552750 MsG0680031952.01.T01:intron 35.0%
ATTCGGGATAAAAATCTGTC+GGG - Chr6:30553313-30553332 MsG0680031952.01.T01:intron 35.0%
ATTCTGATATCCTTGAAGCA+AGG + Chr6:30554984-30555003 None:intergenic 35.0%
ATTTGACCTACCATGATTTG+TGG + Chr6:30553240-30553259 None:intergenic 35.0%
CATGTTTAGCATGTTCAGAT+CGG - Chr6:30551496-30551515 MsG0680031952.01.T01:intron 35.0%
CGTGTCTACTCTTAAAATAG+CGG + Chr6:30550597-30550616 None:intergenic 35.0%
CTTACATGGATAACCAAAAC+AGG + Chr6:30555209-30555228 None:intergenic 35.0%
CTTCAATAGAATAGACTCTC+AGG + Chr6:30552108-30552127 None:intergenic 35.0%
CTTCTAACAGAATTCTGACT+TGG + Chr6:30552968-30552987 None:intergenic 35.0%
GAAGTTGAATCTGAAAGTAG+AGG + Chr6:30553108-30553127 None:intergenic 35.0%
GAGTACTATACCCTGTAAAA+CGG - Chr6:30555046-30555065 MsG0680031952.01.T01:intron 35.0%
GATAGGTTTAGGAGAAGAAA+GGG - Chr6:30555999-30556018 MsG0680031952.01.T01:CDS 35.0%
GATTCGGGATAAAAATCTGT+CGG - Chr6:30553312-30553331 MsG0680031952.01.T01:intron 35.0%
GCGTACGTATTATATTCAGT+TGG + Chr6:30554859-30554878 None:intergenic 35.0%
GGCCTAAACAAGTGTTTATA+AGG - Chr6:30554341-30554360 MsG0680031952.01.T01:intron 35.0%
GTAACAGGAAGATAGATAAC+AGG + Chr6:30550936-30550955 None:intergenic 35.0%
GTCAGAATTCTGTTAGAAGT+TGG - Chr6:30552969-30552988 MsG0680031952.01.T01:intron 35.0%
GTTGAGTGAATTGAACTTCA+TGG - Chr6:30550978-30550997 MsG0680031952.01.T01:intron 35.0%
TCAAGCAAAGAATCAGAAAC+TGG - Chr6:30555849-30555868 MsG0680031952.01.T01:intron 35.0%
TCAAGGATATCAGAATTGAG+AGG - Chr6:30554988-30555007 MsG0680031952.01.T01:intron 35.0%
TCTTAGCTGTATTAATGGAG+TGG + Chr6:30551471-30551490 None:intergenic 35.0%
TGAAGGTGAAAACAAGAAGA+GGG - Chr6:30549268-30549287 MsG0680031952.01.T01:CDS 35.0%
TGATAGGTTTAGGAGAAGAA+AGG - Chr6:30555998-30556017 MsG0680031952.01.T01:CDS 35.0%
TGATCTAGTAAATGCAACCA+TGG - Chr6:30556399-30556418 MsG0680031952.01.T01:five_prime_UTR 35.0%
TGGATAAGACCAGATAATTC+AGG + Chr6:30556055-30556074 None:intergenic 35.0%
TGGATTTGAAGAGTGAAAAG+TGG + Chr6:30549008-30549027 None:intergenic 35.0%
TTAAACCGAAGAAAGGCTTT+GGG - Chr6:30552732-30552751 MsG0680031952.01.T01:intron 35.0%
TTAGTTGTTGCCTGATTTAG+AGG - Chr6:30550153-30550172 MsG0680031952.01.T01:intron 35.0%
! AACCAATATGTCCGTTTTAC+AGG + Chr6:30555060-30555079 None:intergenic 35.0%
! ACCAATATGTCCGTTTTACA+GGG + Chr6:30555059-30555078 None:intergenic 35.0%
! AGCTTTATATGGACTCAAAC+AGG + Chr6:30552783-30552802 None:intergenic 35.0%
! ATTTGGGATACTCGAGTATA+TGG + Chr6:30552436-30552455 None:intergenic 35.0%
! CAGATCATGTTGATAGGTTT+AGG - Chr6:30555988-30556007 MsG0680031952.01.T01:CDS 35.0%
! CTCCCAAACAAAATGCATTT+TGG + Chr6:30552329-30552348 None:intergenic 35.0%
! GGGAAAAGCAAAGTTTTCAT+TGG + Chr6:30553219-30553238 None:intergenic 35.0%
! GTTGCATAGTCCAATTTTGT+CGG - Chr6:30555017-30555036 MsG0680031952.01.T01:intron 35.0%
! TGTACCATGCTTTATTCTCA+TGG - Chr6:30549333-30549352 MsG0680031952.01.T01:CDS 35.0%
! TTCAACTACAGCTTCCTTTT+CGG + Chr6:30555808-30555827 None:intergenic 35.0%
! TTGCATAGTCCAATTTTGTC+GGG - Chr6:30555018-30555037 MsG0680031952.01.T01:intron 35.0%
! TTGGCTGTTTCAACAGAAAA+AGG + Chr6:30554840-30554859 None:intergenic 35.0%
! TTTGACCTACCATGATTTGT+GGG + Chr6:30553239-30553258 None:intergenic 35.0%
!! AGAATTCTGACTTGGTAGTT+GGG + Chr6:30552960-30552979 None:intergenic 35.0%
!! AGTTTTGTGGAGTTGTGTTA+GGG - Chr6:30554389-30554408 MsG0680031952.01.T01:intron 35.0%
!! CTTTTATTTCTTGATGCCCT+CGG + Chr6:30553193-30553212 None:intergenic 35.0%
!! TTTGCTTTTCCCACAAATCA+TGG - Chr6:30553227-30553246 MsG0680031952.01.T01:intron 35.0%
!! TTTTATTTCTTGATGCCCTC+GGG + Chr6:30553192-30553211 None:intergenic 35.0%
!!! ACTTATTTTGCTAGAGCAGA+AGG - Chr6:30554512-30554531 MsG0680031952.01.T01:intron 35.0%
!!! GTTGCAATTTTTTTTTGCCC+GGG - Chr6:30552636-30552655 MsG0680031952.01.T01:intron 35.0%
!!! TGTCTTTATTTTAAGCTCGG+GGG - Chr6:30551031-30551050 MsG0680031952.01.T01:intron 35.0%
!!! TTTTTTTAAACCCGTGGCTA+GGG + Chr6:30553935-30553954 None:intergenic 35.0%
AACGTAACACAGTCCACATA+AGG + Chr6:30551793-30551812 None:intergenic 40.0%
AAGAAGAGGGAATGAAATCG+TGG - Chr6:30549281-30549300 MsG0680031952.01.T01:CDS 40.0%
AAGATTCGCAAGTTGCTCTA+AGG - Chr6:30552402-30552421 MsG0680031952.01.T01:intron 40.0%
AAGGAGGAAGTCAAAAAAGG+TGG - Chr6:30553265-30553284 MsG0680031952.01.T01:intron 40.0%
AATGCCTGAAGGAACAATAC+GGG - Chr6:30554899-30554918 MsG0680031952.01.T01:intron 40.0%
AATGCTAGTGGCATCATACA+TGG + Chr6:30552031-30552050 None:intergenic 40.0%
ACATGGATTTAGGGGAGATT+AGG + Chr6:30555430-30555449 None:intergenic 40.0%
ACCCTCAAGACATGGATTTA+GGG + Chr6:30555439-30555458 None:intergenic 40.0%
ACCCTGTAAAACGGACATAT+TGG - Chr6:30555055-30555074 MsG0680031952.01.T01:intron 40.0%
ACGGCTATCTAAACTGTTTC+TGG + Chr6:30555919-30555938 None:intergenic 40.0%
ACTGATGTATTCAGTTTGGG+AGG - Chr6:30552683-30552702 MsG0680031952.01.T01:intron 40.0%
AGCGGTCAAAATTTCAACTC+CGG + Chr6:30550579-30550598 None:intergenic 40.0%
AGCTGCATATAAATGCCTGA+AGG - Chr6:30554888-30554907 MsG0680031952.01.T01:intron 40.0%
AGGTAAAGTATGAACCCTTG+TGG - Chr6:30555673-30555692 MsG0680031952.01.T01:intron 40.0%
AGGTTACATTGCCCAACTAT+TGG - Chr6:30553653-30553672 MsG0680031952.01.T01:intron 40.0%
AGTTACGATTACTCTGGCTA+CGG - Chr6:30551396-30551415 MsG0680031952.01.T01:intron 40.0%
CAAACTGAATACATCAGTGG+CGG + Chr6:30552681-30552700 None:intergenic 40.0%
CCTAAACCAACTACTGCAAA+TGG - Chr6:30555780-30555799 MsG0680031952.01.T01:intron 40.0%
CGATATGTAGCTTGAAACCT+TGG - Chr6:30553756-30553775 MsG0680031952.01.T01:intron 40.0%
CTAACACAACTCCACAAAAC+TGG + Chr6:30554390-30554409 None:intergenic 40.0%
GAACATTACATATTTGGGGG+AGG + Chr6:30555255-30555274 None:intergenic 40.0%
GAATAAAGCATGGTACATGC+AGG + Chr6:30549330-30549349 None:intergenic 40.0%
GACAGGTTACCAAAATGTAC+TGG + Chr6:30554025-30554044 None:intergenic 40.0%
GATGCTTGACTCAAATTCTG+TGG + Chr6:30553851-30553870 None:intergenic 40.0%
GCCACTGATGTATTCAGTTT+GGG - Chr6:30552680-30552699 MsG0680031952.01.T01:intron 40.0%
GGCTGCACGTTCAATAAATT+TGG + Chr6:30552247-30552266 None:intergenic 40.0%
GGTAAAGTATGAACCCTTGT+GGG - Chr6:30555674-30555693 MsG0680031952.01.T01:intron 40.0%
GTAGGTCAAATGGAAAAAGG+AGG - Chr6:30553249-30553268 MsG0680031952.01.T01:intron 40.0%
GTATTGTAGGTTCTGCAGAA+AGG + Chr6:30553549-30553568 None:intergenic 40.0%
GTGAAGGTGAAAACAAGAAG+AGG - Chr6:30549267-30549286 MsG0680031952.01.T01:CDS 40.0%
TAAACCGAAGAAAGGCTTTG+GGG - Chr6:30552733-30552752 MsG0680031952.01.T01:intron 40.0%
TACTGCAAATGGTTCCGAAA+AGG - Chr6:30555791-30555810 MsG0680031952.01.T01:intron 40.0%
TAGTGGTCGTTCGATCTAAT+CGG + Chr6:30556232-30556251 None:intergenic 40.0%
TATTTGTGTGTGTGCATTGG+GGG - Chr6:30554253-30554272 MsG0680031952.01.T01:intron 40.0%
TCAAAATTTCAACTCCGGTC+TGG + Chr6:30550574-30550593 None:intergenic 40.0%
TCCCAAACTGAATACATCAG+TGG + Chr6:30552684-30552703 None:intergenic 40.0%
TCCTACTTGATTTCATGTCG+AGG - Chr6:30553960-30553979 MsG0680031952.01.T01:intron 40.0%
TCTGGTTATGACCATTAGGT+AGG - Chr6:30554631-30554650 MsG0680031952.01.T01:intron 40.0%
TGAGCACAGATCATGTTGAT+AGG - Chr6:30555982-30556001 MsG0680031952.01.T01:CDS 40.0%
TTACTTTCACCCTCAAGACA+TGG + Chr6:30555447-30555466 None:intergenic 40.0%
TTGATGTGGCAACACATCAT+TGG + Chr6:30549781-30549800 None:intergenic 40.0%
TTGTGTGATTTAGGCCAGAA+TGG - Chr6:30552134-30552153 MsG0680031952.01.T01:intron 40.0%
TTTATCCCACTAAGTGGGAT+CGG + Chr6:30550260-30550279 None:intergenic 40.0%
TTTGCCAGTTACGATTACTC+TGG - Chr6:30551390-30551409 MsG0680031952.01.T01:intron 40.0%
! AAACCTGAGCTTTTGTCATG+AGG - Chr6:30553732-30553751 MsG0680031952.01.T01:intron 40.0%
! ACACTATCTAGTCGCTTTCT+CGG + Chr6:30551633-30551652 None:intergenic 40.0%
! AGGTTGATTCATAGAGATGG+CGG + Chr6:30549054-30549073 None:intergenic 40.0%
! ATCTTTGCTGCCTTTGTTGT+TGG - Chr6:30555293-30555312 MsG0680031952.01.T01:intron 40.0%
! CAAGCTTTATCCCACTAAGT+GGG + Chr6:30550265-30550284 None:intergenic 40.0%
! CATGGTCAAATGTCCTGTTT+TGG - Chr6:30555193-30555212 MsG0680031952.01.T01:intron 40.0%
! CCATTTGCAGTAGTTGGTTT+AGG + Chr6:30555783-30555802 None:intergenic 40.0%
! CTTTTCCCACAAATCATGGT+AGG - Chr6:30553231-30553250 MsG0680031952.01.T01:intron 40.0%
! GACACGGGAACTTTGAAAAA+AGG + Chr6:30553502-30553521 None:intergenic 40.0%
! GCAGCCCAAAAATGCTTTTA+GGG + Chr6:30553817-30553836 None:intergenic 40.0%
! GGTAATTGTGACTTTTGTGG+TGG - Chr6:30550729-30550748 MsG0680031952.01.T01:intron 40.0%
! TCAAGCTTTATCCCACTAAG+TGG + Chr6:30550266-30550285 None:intergenic 40.0%
! TCACTACCCACTGTATTTTC+TGG - Chr6:30550548-30550567 MsG0680031952.01.T01:intron 40.0%
! TCATGGAAATGCTGCTGATT+TGG - Chr6:30549350-30549369 MsG0680031952.01.T01:CDS 40.0%
! TGCAGCCCAAAAATGCTTTT+AGG + Chr6:30553818-30553837 None:intergenic 40.0%
! TGCATAGTCCAATTTTGTCG+GGG - Chr6:30555019-30555038 MsG0680031952.01.T01:intron 40.0%
!! AAACTGTTTCTGGAAGCTTC+AGG + Chr6:30555909-30555928 None:intergenic 40.0%
!! CAGAATTCTGACTTGGTAGT+TGG + Chr6:30552961-30552980 None:intergenic 40.0%
!! CAGTTTTGTGGAGTTGTGTT+AGG - Chr6:30554388-30554407 MsG0680031952.01.T01:intron 40.0%
!! CATGGAAATGCTGCTGATTT+GGG - Chr6:30549351-30549370 MsG0680031952.01.T01:CDS 40.0%
!! CGAGATTTCTCTGGTTTGTT+TGG + Chr6:30555960-30555979 None:intergenic 40.0%
!! GAATTCTGACTTGGTAGTTG+GGG + Chr6:30552959-30552978 None:intergenic 40.0%
!! GATTTCGGGGTTTTTCAATC+TGG - Chr6:30552162-30552181 MsG0680031952.01.T01:intron 40.0%
!! GTACATTTTGGTAACCTGTC+TGG - Chr6:30554025-30554044 MsG0680031952.01.T01:intron 40.0%
!! TTCCCATAGCTGTTTTCCAT+GGG + Chr6:30555646-30555665 None:intergenic 40.0%
!!! CTTTTTTTAAACCCGTGGCT+AGG + Chr6:30553936-30553955 None:intergenic 40.0%
!!! GATAATGGGCCAGTACATTT+TGG - Chr6:30554013-30554032 MsG0680031952.01.T01:intron 40.0%
AAAAAATTTGACCCGGAGCC+CGG + Chr6:30552500-30552519 None:intergenic 45.0%
AACACGGTCGGTAACAATAG+TGG + Chr6:30556249-30556268 None:intergenic 45.0%
AAGAGGGAATGAAATCGTGG+CGG - Chr6:30549284-30549303 MsG0680031952.01.T01:CDS 45.0%
ACAGCTATGGGAACTTTGCA+AGG - Chr6:30555653-30555672 MsG0680031952.01.T01:intron 45.0%
ACATCCACGTTCTCCTTCAT+CGG + Chr6:30549246-30549265 None:intergenic 45.0%
ACTCGAGTATCCCAAATGTC+AGG - Chr6:30552439-30552458 MsG0680031952.01.T01:intron 45.0%
ACTCTCAACCCCGACAAAAT+TGG + Chr6:30555030-30555049 None:intergenic 45.0%
ACTGGAGATGTCTGCTATAG+TGG - Chr6:30550808-30550827 MsG0680031952.01.T01:intron 45.0%
AGAATTGGCAACAACCAGAC+AGG + Chr6:30554042-30554061 None:intergenic 45.0%
AGCGAACTTTGCAGCTATTG+AGG + Chr6:30549097-30549116 None:intergenic 45.0%
AGTCAAAAAAGGTGGCTGTG+TGG - Chr6:30553273-30553292 MsG0680031952.01.T01:intron 45.0%
ATGCCTGAAGGAACAATACG+GGG - Chr6:30554900-30554919 MsG0680031952.01.T01:intron 45.0%
ATGTTCTGACTGCGTGAATG+CGG + Chr6:30556116-30556135 None:intergenic 45.0%
ATTACATATTTGGGGGAGGG+AGG + Chr6:30555251-30555270 None:intergenic 45.0%
CACCCTCAAGACATGGATTT+AGG + Chr6:30555440-30555459 None:intergenic 45.0%
CAGAATGGCACATGATTTCG+GGG - Chr6:30552149-30552168 MsG0680031952.01.T01:intron 45.0%
CATTCACGCAGTCAGAACAT+CGG - Chr6:30556116-30556135 MsG0680031952.01.T01:CDS 45.0%
CCAATCATGACTAGATCACG+AGG - Chr6:30550494-30550513 MsG0680031952.01.T01:intron 45.0%
CCAGAATGGCACATGATTTC+GGG - Chr6:30552148-30552167 MsG0680031952.01.T01:intron 45.0%
CCAGGATTATTGTAAAGCCC+GGG + Chr6:30552656-30552675 None:intergenic 45.0%
CCCCTAAATCCATGTCTTGA+GGG - Chr6:30555435-30555454 MsG0680031952.01.T01:intron 45.0%
CCCTCAAGACATGGATTTAG+GGG + Chr6:30555438-30555457 None:intergenic 45.0%
CCTCGTGATCTAGTCATGAT+TGG + Chr6:30550497-30550516 None:intergenic 45.0%
CGCCACTGATGTATTCAGTT+TGG - Chr6:30552679-30552698 MsG0680031952.01.T01:intron 45.0%
CTATGAATCAACCTCCCCAT+GGG - Chr6:30549060-30549079 MsG0680031952.01.T01:three_prime_UTR 45.0%
CTCGAGTATCCCAAATGTCA+GGG - Chr6:30552440-30552459 MsG0680031952.01.T01:intron 45.0%
CTTACCTTATGGCCAAACTC+CGG - Chr6:30550375-30550394 MsG0680031952.01.T01:CDS 45.0%
CTTGAAGCAAGGTCAAGTGT+GGG + Chr6:30554973-30554992 None:intergenic 45.0%
GAAGTTGTAGATGTGTCCCA+TGG - Chr6:30555627-30555646 MsG0680031952.01.T01:intron 45.0%
GAGTTTCTTCTCCAAGACCA+AGG + Chr6:30553776-30553795 None:intergenic 45.0%
GATAACCCGAGTTCGATTAC+TGG - Chr6:30550314-30550333 MsG0680031952.01.T01:CDS 45.0%
GATTTCATGTCGAGGCTATG+TGG - Chr6:30553968-30553987 MsG0680031952.01.T01:intron 45.0%
GCCAGAATGGCACATGATTT+CGG - Chr6:30552147-30552166 MsG0680031952.01.T01:intron 45.0%
GCCAGGATTATTGTAAAGCC+CGG + Chr6:30552657-30552676 None:intergenic 45.0%
GCCTCGACATGAAATCAAGT+AGG + Chr6:30553964-30553983 None:intergenic 45.0%
GGAATCGAAAGCTTCGTTAC+CGG + Chr6:30549216-30549235 None:intergenic 45.0%
GGTAACGAAGCTTTCGATTC+CGG - Chr6:30549215-30549234 MsG0680031952.01.T01:three_prime_UTR 45.0%
GTAGCCAGAGTAATCGTAAC+TGG + Chr6:30551397-30551416 None:intergenic 45.0%
GTAGCTTGAAACCTTGGTCT+TGG - Chr6:30553762-30553781 MsG0680031952.01.T01:intron 45.0%
GTCCCATGGAAAACAGCTAT+GGG - Chr6:30555641-30555660 MsG0680031952.01.T01:intron 45.0%
GTCTCACCAGTAATCGAACT+CGG + Chr6:30550323-30550342 None:intergenic 45.0%
GTCTGGCCAGAAAATACAGT+GGG + Chr6:30550557-30550576 None:intergenic 45.0%
GTGCTCATTCGAGATTTCTC+TGG + Chr6:30555969-30555988 None:intergenic 45.0%
GTGTGTGTTTGGAAATCCGT+TGG + Chr6:30555408-30555427 None:intergenic 45.0%
TAATCCGGAGTTTGGCCATA+AGG + Chr6:30550382-30550401 None:intergenic 45.0%
TAATGGAGTGGTAGACTCAG+AGG + Chr6:30551459-30551478 None:intergenic 45.0%
TATGAACCCTTGTGGGTAAG+TGG - Chr6:30555681-30555700 MsG0680031952.01.T01:intron 45.0%
TCCCCTAAATCCATGTCTTG+AGG - Chr6:30555434-30555453 MsG0680031952.01.T01:intron 45.0%
TCGAGTATCCCAAATGTCAG+GGG - Chr6:30552441-30552460 MsG0680031952.01.T01:intron 45.0%
TCGGAACCATTTGCAGTAGT+TGG + Chr6:30555789-30555808 None:intergenic 45.0%
TCTATGAATCAACCTCCCCA+TGG - Chr6:30549059-30549078 MsG0680031952.01.T01:three_prime_UTR 45.0%
TCTCACCAGTAATCGAACTC+GGG + Chr6:30550322-30550341 None:intergenic 45.0%
TGATGTCTTGTGTGTGTGCT+TGG + Chr6:30553387-30553406 None:intergenic 45.0%
TGGTGGAGCCAAAACAAAAC+AGG + Chr6:30554456-30554475 None:intergenic 45.0%
TGTCCCATGGAAAACAGCTA+TGG - Chr6:30555640-30555659 MsG0680031952.01.T01:intron 45.0%
TTACATATTTGGGGGAGGGA+GGG + Chr6:30555250-30555269 None:intergenic 45.0%
TTCAGATACGGTGAGTGTGT+AGG + Chr6:30549142-30549161 None:intergenic 45.0%
TTCTCCTTCATCGGAACTTC+CGG + Chr6:30549237-30549256 None:intergenic 45.0%
TTGAGATGCAGCCTACCTAA+TGG + Chr6:30554645-30554664 None:intergenic 45.0%
TTGGGTCAAATCCCAACTGT+CGG + Chr6:30552932-30552951 None:intergenic 45.0%
! ATTACAGGGCCTCTTTTCCT+AGG - Chr6:30550398-30550417 MsG0680031952.01.T01:CDS 45.0%
! CGCGTGAAGTTTGTTTGGTT+TGG + Chr6:30549028-30549047 None:intergenic 45.0%
! CTCTTTTCCTAGGAACCAGA+GGG - Chr6:30550408-30550427 MsG0680031952.01.T01:intron 45.0%
! GGGAGGTTGATTCATAGAGA+TGG + Chr6:30549057-30549076 None:intergenic 45.0%
! TTGATTCATAGAGATGGCGG+TGG + Chr6:30549051-30549070 None:intergenic 45.0%
! TTTGGACTTGCTCACTGAAG+CGG + Chr6:30552311-30552330 None:intergenic 45.0%
!! ACTGTATTTTCTGGCCAGAC+CGG - Chr6:30550557-30550576 MsG0680031952.01.T01:intron 45.0%
!! GGAGAAGAAAGGGGTTAGTT+TGG - Chr6:30556009-30556028 MsG0680031952.01.T01:CDS 45.0%
!! GTTCCCATAGCTGTTTTCCA+TGG + Chr6:30555647-30555666 None:intergenic 45.0%
!!! AATACTTTTTAAAAAAATTT+GGG - Chr6:30555465-30555484 MsG0680031952.01.T01:intron 5.0%
!!! TAATACTTTTTAAAAAAATT+TGG - Chr6:30555464-30555483 MsG0680031952.01.T01:intron 5.0%
AAAAATTTGACCCGGAGCCC+GGG + Chr6:30552499-30552518 None:intergenic 50.0%
AAATGTCAGGGGCGGTTCTA+TGG - Chr6:30552452-30552471 MsG0680031952.01.T01:intron 50.0%
AAATTTGGACCGCCCCATCT+TGG + Chr6:30556153-30556172 None:intergenic 50.0%
AACGTGCAGCCACCTACTAT+AGG - Chr6:30552256-30552275 MsG0680031952.01.T01:intron 50.0%
AAGGAGGGATTGAACTGCAC+CGG + Chr6:30554229-30554248 None:intergenic 50.0%
AATACACGCTCGGGCTGATT+CGG - Chr6:30553296-30553315 MsG0680031952.01.T01:intron 50.0%
ACCCGAAAAAATCCATCCCG+AGG - Chr6:30553173-30553192 MsG0680031952.01.T01:intron 50.0%
ACTAAGTGGGATCGGCTACA+TGG + Chr6:30550252-30550271 None:intergenic 50.0%
AGTATCCCAAATGTCAGGGG+CGG - Chr6:30552444-30552463 MsG0680031952.01.T01:intron 50.0%
AGTTCCGATGAAGGAGAACG+TGG - Chr6:30549239-30549258 MsG0680031952.01.T01:exon 50.0%
ATAGAACCGCCCCTGACATT+TGG + Chr6:30552453-30552472 None:intergenic 50.0%
ATCCCAACTGTCGGCACAAT+AGG + Chr6:30552923-30552942 None:intergenic 50.0%
ATGGCCAAACTCCGGATTAC+AGG - Chr6:30550383-30550402 MsG0680031952.01.T01:CDS 50.0%
ATGTAGCCGATCCCACTTAG+TGG - Chr6:30550251-30550270 MsG0680031952.01.T01:CDS 50.0%
ATTTCTTGATGCCCTCGGGA+TGG + Chr6:30553188-30553207 None:intergenic 50.0%
CATCTGCTGTGCCCTGATAT+TGG + Chr6:30555608-30555627 None:intergenic 50.0%
CCACACTTGACCTTGCTTCA+AGG - Chr6:30554971-30554990 MsG0680031952.01.T01:intron 50.0%
CCCGAAAAAATCCATCCCGA+GGG - Chr6:30553174-30553193 MsG0680031952.01.T01:intron 50.0%
CCCGGGCTTTACAATAATCC+TGG - Chr6:30552653-30552672 MsG0680031952.01.T01:intron 50.0%
CCTTGAAGCAAGGTCAAGTG+TGG + Chr6:30554974-30554993 None:intergenic 50.0%
CGACCTCATGACAAAAGCTC+AGG + Chr6:30553738-30553757 None:intergenic 50.0%
CGCAGAAAACGGTACTTCAC+CGG - Chr6:30549194-30549213 MsG0680031952.01.T01:three_prime_UTR 50.0%
CGTGTTAAAGAGTCCCACAC+TGG - Chr6:30554309-30554328 MsG0680031952.01.T01:intron 50.0%
CTTGCTCACTGAAGCGGATA+TGG + Chr6:30552305-30552324 None:intergenic 50.0%
GAGCTGGATCTGTGGAATAG+TGG + Chr6:30556075-30556094 None:intergenic 50.0%
GATACGGTGAGTGTGTAGGA+TGG + Chr6:30549138-30549157 None:intergenic 50.0%
GATTCCGGAAGTTCCGATGA+AGG - Chr6:30549230-30549249 MsG0680031952.01.T01:exon 50.0%
GGAAAAGAGGCCCTGTAATC+CGG + Chr6:30550397-30550416 None:intergenic 50.0%
GGAGAACGTGGATGTAGTGA+AGG - Chr6:30549251-30549270 MsG0680031952.01.T01:CDS 50.0%
GGAGAGAGGAGTCACTTACA+TGG + Chr6:30555223-30555242 None:intergenic 50.0%
GGGGAGATTAGGTGTGTGTT+TGG + Chr6:30555419-30555438 None:intergenic 50.0%
GGTCGTTCGATCTAATCGGA+CGG + Chr6:30556228-30556247 None:intergenic 50.0%
GGTCTGGCCAGAAAATACAG+TGG + Chr6:30550558-30550577 None:intergenic 50.0%
GGTGGTTGTACGACCAAGAT+GGG - Chr6:30556137-30556156 MsG0680031952.01.T01:CDS 50.0%
GTGGTTGTACGACCAAGATG+GGG - Chr6:30556138-30556157 MsG0680031952.01.T01:CDS 50.0%
TAGAACCGCCCCTGACATTT+GGG + Chr6:30552452-30552471 None:intergenic 50.0%
TATGGTCAATCCGTTGGCAG+CGG - Chr6:30554946-30554965 MsG0680031952.01.T01:intron 50.0%
TCACCCCGTATTGTTCCTTC+AGG + Chr6:30554906-30554925 None:intergenic 50.0%
TCAGAAACCCCGCATCAACA+CGG + Chr6:30556265-30556284 None:intergenic 50.0%
TGGCCAAACTCCGGATTACA+GGG - Chr6:30550384-30550403 MsG0680031952.01.T01:CDS 50.0%
TGTAGCCGATCCCACTTAGT+GGG - Chr6:30550252-30550271 MsG0680031952.01.T01:CDS 50.0%
TGTTCTGACTGCGTGAATGC+GGG + Chr6:30556115-30556134 None:intergenic 50.0%
! AGTGTGTAGGATGGTGGTTG+TGG + Chr6:30549129-30549148 None:intergenic 50.0%
! CACCTCACAAGCCAGTTTTG+TGG - Chr6:30554376-30554395 MsG0680031952.01.T01:intron 50.0%
! CCCGAAATCATGTGCCATTC+TGG + Chr6:30552151-30552170 None:intergenic 50.0%
! CCTCTGGTTCCTAGGAAAAG+AGG + Chr6:30550410-30550429 None:intergenic 50.0%
! CCTCTTTTCCTAGGAACCAG+AGG - Chr6:30550407-30550426 MsG0680031952.01.T01:CDS 50.0%
! GGTGGAGGTGGATTCAGATA+CGG + Chr6:30549154-30549173 None:intergenic 50.0%
! GTCCTATTGTGCCGACAGTT+GGG - Chr6:30552918-30552937 MsG0680031952.01.T01:intron 50.0%
! GTGTTAACCCTCTGGTTCCT+AGG + Chr6:30550418-30550437 None:intergenic 50.0%
! TGTAGGATGGTGGTTGTGGT+GGG + Chr6:30549125-30549144 None:intergenic 50.0%
! TGTCCTATTGTGCCGACAGT+TGG - Chr6:30552917-30552936 MsG0680031952.01.T01:intron 50.0%
! TGTTACCGACCGTGTTGATG+CGG - Chr6:30556253-30556272 MsG0680031952.01.T01:five_prime_UTR 50.0%
! TTTTGCAGTAGCAGTCGCAC+TGG + Chr6:30552085-30552104 None:intergenic 50.0%
!! CAAAACTGGCTTGTGAGGTG+AGG + Chr6:30554376-30554395 None:intergenic 50.0%
!! CATGATTGGTCTCTTTCGCG+AGG + Chr6:30550483-30550502 None:intergenic 50.0%
!! CTCCACAAAACTGGCTTGTG+AGG + Chr6:30554381-30554400 None:intergenic 50.0%
!! TCTGACTTGGTAGTTGGGGA+GGG + Chr6:30552955-30552974 None:intergenic 50.0%
!! TTCTGACTTGGTAGTTGGGG+AGG + Chr6:30552956-30552975 None:intergenic 50.0%
!!! CCCTCGGGATGGATTTTTTC+GGG + Chr6:30553177-30553196 None:intergenic 50.0%
!!! CGGTGAAGTACCGTTTTCTG+CGG + Chr6:30549196-30549215 None:intergenic 50.0%
!!! GCCCTCGGGATGGATTTTTT+CGG + Chr6:30553178-30553197 None:intergenic 50.0%
!!! TGAAGTACCGTTTTCTGCGG+CGG + Chr6:30549193-30549212 None:intergenic 50.0%
AAACCCCGCATCAACACGGT+CGG + Chr6:30556261-30556280 None:intergenic 55.0%
AATCTCGACCGCAAAGGAGC+TGG + Chr6:30556091-30556110 None:intergenic 55.0%
ACGGTGAGTGTGTAGGATGG+TGG + Chr6:30549135-30549154 None:intergenic 55.0%
AGGAAGTTACTCCGCCCATG+GGG + Chr6:30549077-30549096 None:intergenic 55.0%
AGGCCCTGTAATCCGGAGTT+TGG + Chr6:30550390-30550409 None:intergenic 55.0%
ATGCTCTTAGCCCTAGCCAC+GGG - Chr6:30553922-30553941 MsG0680031952.01.T01:intron 55.0%
CATGCTCTTAGCCCTAGCCA+CGG - Chr6:30553921-30553940 MsG0680031952.01.T01:intron 55.0%
CCAACAGGCATCATTGCACG+AGG + Chr6:30556296-30556315 None:intergenic 55.0%
CCACAGATCCAGCTCCTTTG+CGG - Chr6:30556080-30556099 MsG0680031952.01.T01:CDS 55.0%
CCACCTCCACTTACCCACAA+GGG + Chr6:30555690-30555709 None:intergenic 55.0%
CCTCGTGCAATGATGCCTGT+TGG - Chr6:30556293-30556312 MsG0680031952.01.T01:five_prime_UTR 55.0%
CGGTGGTTGTACGACCAAGA+TGG - Chr6:30556136-30556155 MsG0680031952.01.T01:CDS 55.0%
GAACCCTTGTGGGTAAGTGG+AGG - Chr6:30555684-30555703 MsG0680031952.01.T01:intron 55.0%
GAGGAAGTTACTCCGCCCAT+GGG + Chr6:30549078-30549097 None:intergenic 55.0%
GCTGTGTGGAATACACGCTC+GGG - Chr6:30553287-30553306 MsG0680031952.01.T01:intron 55.0%
GGCTCCCCAAAGCCTTTCTT+CGG + Chr6:30552740-30552759 None:intergenic 55.0%
GGCTGTGTGGAATACACGCT+CGG - Chr6:30553286-30553305 MsG0680031952.01.T01:intron 55.0%
GTCCCACACTGGATGAGAGA+CGG - Chr6:30554320-30554339 MsG0680031952.01.T01:intron 55.0%
GTTCTGACTGCGTGAATGCG+GGG + Chr6:30556114-30556133 None:intergenic 55.0%
GTTGTACGACCAAGATGGGG+CGG - Chr6:30556141-30556160 MsG0680031952.01.T01:CDS 55.0%
TCACGCAGTCAGAACATCGG+TGG - Chr6:30556119-30556138 MsG0680031952.01.T01:CDS 55.0%
TCCACCTCCACTTACCCACA+AGG + Chr6:30555691-30555710 None:intergenic 55.0%
TGAATCAACCTCCCCATGGG+CGG - Chr6:30549063-30549082 MsG0680031952.01.T01:three_prime_UTR 55.0%
TGAGGAAGTTACTCCGCCCA+TGG + Chr6:30549079-30549098 None:intergenic 55.0%
! AATACATCAGTGGCGGAGCC+AGG + Chr6:30552674-30552693 None:intergenic 55.0%
! ACTTGGTAGTTGGGGAGGGT+TGG + Chr6:30552951-30552970 None:intergenic 55.0%
! ATACACGCTCGGGCTGATTC+GGG - Chr6:30553297-30553316 MsG0680031952.01.T01:intron 55.0%
! CTTGGTAGTTGGGGAGGGTT+GGG + Chr6:30552950-30552969 None:intergenic 55.0%
! GGTGGCGCGTGAAGTTTGTT+TGG + Chr6:30549033-30549052 None:intergenic 55.0%
! GTGTAGGATGGTGGTTGTGG+TGG + Chr6:30549126-30549145 None:intergenic 55.0%
! GTTACCGACCGTGTTGATGC+GGG - Chr6:30556254-30556273 MsG0680031952.01.T01:five_prime_UTR 55.0%
! TTACCGACCGTGTTGATGCG+GGG - Chr6:30556255-30556274 MsG0680031952.01.T01:five_prime_UTR 55.0%
!! AAAGGCTTTGGGGAGCCTGT+CGG - Chr6:30552743-30552762 MsG0680031952.01.T01:intron 55.0%
AAGTGTGGGACCGCTGCCAA+CGG + Chr6:30554959-30554978 None:intergenic 60.0%
AAGTTACTCCGCCCATGGGG+AGG + Chr6:30549074-30549093 None:intergenic 60.0%
AGGCCGTCTCTCATCCAGTG+TGG + Chr6:30554326-30554345 None:intergenic 60.0%
ATTTGGGGGAGGGAGGGAGA+GGG + Chr6:30555244-30555263 None:intergenic 60.0%
CCCTTGTGGGTAAGTGGAGG+TGG - Chr6:30555687-30555706 MsG0680031952.01.T01:intron 60.0%
CCGCAAAGGAGCTGGATCTG+TGG + Chr6:30556083-30556102 None:intergenic 60.0%
CTACGGACAGTCGACAGGGA+AGG - Chr6:30551413-30551432 MsG0680031952.01.T01:intron 60.0%
CTCAAACAGGCCCTTGAGCC+AGG + Chr6:30552770-30552789 None:intergenic 60.0%
CTGGCTACGGACAGTCGACA+GGG - Chr6:30551409-30551428 MsG0680031952.01.T01:intron 60.0%
GGCATCATTGCACGAGGAGC+TGG + Chr6:30556290-30556309 None:intergenic 60.0%
GGCCGTCTCTCATCCAGTGT+GGG + Chr6:30554325-30554344 None:intergenic 60.0%
TATTTGGGGGAGGGAGGGAG+AGG + Chr6:30555245-30555264 None:intergenic 60.0%
TCTGGCTACGGACAGTCGAC+AGG - Chr6:30551408-30551427 MsG0680031952.01.T01:intron 60.0%
! AGTACCGTTTTCTGCGGCGG+CGG + Chr6:30549190-30549209 None:intergenic 60.0%
!! CAGTCGCACTGGTTCGCCAT+AGG + Chr6:30552074-30552093 None:intergenic 60.0%
AGCCTGTCGGACCTGGCTCA+AGG - Chr6:30552756-30552775 MsG0680031952.01.T01:intron 65.0%
GCCTGTCGGACCTGGCTCAA+GGG - Chr6:30552757-30552776 MsG0680031952.01.T01:intron 65.0%
GCGGGGAATCTCGACCGCAA+AGG + Chr6:30556097-30556116 None:intergenic 65.0%
TCAGGGGCGGTTCTATGGCC+CGG - Chr6:30552457-30552476 MsG0680031952.01.T01:intron 65.0%
TTTGGGGAGCCTGTCGGACC+TGG - Chr6:30552749-30552768 MsG0680031952.01.T01:intron 65.0%
GCCACCGCCGCCGCAGAAAA+CGG - Chr6:30549183-30549202 MsG0680031952.01.T01:three_prime_UTR 70.0%
GCCCTTGAGCCAGGTCCGAC+AGG + Chr6:30552761-30552780 None:intergenic 70.0%
GGAGGGAGGGAGAGGGAGAG+AGG + Chr6:30555237-30555256 None:intergenic 70.0%
GTTCTATGGCCCGGCGACCC+CGG - Chr6:30552466-30552485 MsG0680031952.01.T01:intron 70.0%
TTCTATGGCCCGGCGACCCC+GGG - Chr6:30552467-30552486 MsG0680031952.01.T01:intron 70.0%
! ACCGTTTTCTGCGGCGGCGG+TGG + Chr6:30549187-30549206 None:intergenic 70.0%
! GTTTTCTGCGGCGGCGGTGG+CGG + Chr6:30549184-30549203 None:intergenic 70.0%
! GGTGGCGGTGGAGGTGGTGG+AGG + Chr6:30549169-30549188 None:intergenic 75.0%
!! GGCGGTGGAGGTGGTGGAGG+TGG + Chr6:30549166-30549185 None:intergenic 75.0%
!! GGCGGTGGCGGTGGAGGTGG+TGG + Chr6:30549172-30549191 None:intergenic 80.0%
!! TTCTGCGGCGGCGGTGGCGG+TGG + Chr6:30549181-30549200 None:intergenic 80.0%
! CCGGAGCCCGGGCGAGTGCC+CGG + Chr6:30552488-30552507 None:intergenic 85.0%
! CCGGGCACTCGCCCGGGCTC+CGG - Chr6:30552485-30552504 MsG0680031952.01.T01:intron 85.0%
! CGGAGCCCGGGCGAGTGCCC+GGG + Chr6:30552487-30552506 None:intergenic 85.0%
! CGGGCACTCGCCCGGGCTCC+GGG - Chr6:30552486-30552505 MsG0680031952.01.T01:intron 85.0%
! GCGACCCCGGGCACTCGCCC+GGG - Chr6:30552479-30552498 MsG0680031952.01.T01:intron 85.0%
! GGAGCCCGGGCGAGTGCCCG+GGG + Chr6:30552486-30552505 None:intergenic 85.0%
! GGCGACCCCGGGCACTCGCC+CGG - Chr6:30552478-30552497 MsG0680031952.01.T01:intron 85.0%
! GGCGAGTGCCCGGGGTCGCC+GGG + Chr6:30552478-30552497 None:intergenic 85.0%
! GGGCGAGTGCCCGGGGTCGC+CGG + Chr6:30552479-30552498 None:intergenic 85.0%
!! GGCGGCGGTGGCGGTGGAGG+TGG + Chr6:30549175-30549194 None:intergenic 85.0%
!! TGCGGCGGCGGTGGCGGTGG+AGG + Chr6:30549178-30549197 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
Chr6 gene 30548849 30556433 30548849 ID=MsG0680031952.01;Name=MsG0680031952.01
Chr6 mRNA 30548849 30556433 30548849 ID=MsG0680031952.01.T01;Parent=MsG0680031952.01;Name=MsG0680031952.01.T01;_AED=0.39;_eAED=0.39;_QI=229|1|1|1|1|1|5|399|364
Chr6 exon 30548849 30549667 30548849 ID=MsG0680031952.01.T01:exon:8478;Parent=MsG0680031952.01.T01
Chr6 exon 30550059 30550106 30550059 ID=MsG0680031952.01.T01:exon:8477;Parent=MsG0680031952.01.T01
Chr6 exon 30550190 30550426 30550190 ID=MsG0680031952.01.T01:exon:8476;Parent=MsG0680031952.01.T01
Chr6 exon 30553848 30553884 30553848 ID=MsG0680031952.01.T01:exon:8475;Parent=MsG0680031952.01.T01
Chr6 exon 30555852 30556433 30555852 ID=MsG0680031952.01.T01:exon:8474;Parent=MsG0680031952.01.T01
Chr6 five_prime_UTR 30556205 30556433 30556205 ID=MsG0680031952.01.T01:five_prime_utr;Parent=MsG0680031952.01.T01
Chr6 CDS 30555852 30556204 30555852 ID=MsG0680031952.01.T01:cds;Parent=MsG0680031952.01.T01
Chr6 CDS 30553848 30553884 30553848 ID=MsG0680031952.01.T01:cds;Parent=MsG0680031952.01.T01
Chr6 CDS 30550190 30550426 30550190 ID=MsG0680031952.01.T01:cds;Parent=MsG0680031952.01.T01
Chr6 CDS 30550059 30550106 30550059 ID=MsG0680031952.01.T01:cds;Parent=MsG0680031952.01.T01
Chr6 CDS 30549248 30549667 30549248 ID=MsG0680031952.01.T01:cds;Parent=MsG0680031952.01.T01
Chr6 three_prime_UTR 30548849 30549247 30548849 ID=MsG0680031952.01.T01:three_prime_utr;Parent=MsG0680031952.01.T01
Gene Sequence

>MsG0680031952.01.T01

ATGGGCGGAGTAACTTCCTCAATAGCTGCAAAGTTCGCTTTCTTCCCACCACAACCACCATCCTACACACTCACCGTATCTGAATCCACCTCCACCACCTCCACCGCCACCGCCGCCGCAGAAAACGGTACTTCACCGGTAACGAAGCTTTCGATTCCGGAAGTTCCGATGAAGGAGAACGTGGATGTAGTGAAGGTGAAAACAAGAAGAGGGAATGAAATCGTGGCGGTGTATGTTAAGTATCATAGACCTGCATGTACCATGCTTTATTCTCATGGAAATGCTGCTGATTTGGGTCAGATGTTTGAATTGTTTGTTGAATTGAGTAATCGTCTCAGAATTAATGTTATGGGTTACGATTACTCTGGCTACGGACAGTCGACAGGGAAGCCAACTGAATATAATACGTACGCAGATATTGAAGCTGCATATAAATGCCTGAAGGAACAATACGGGGTGAAAGATGAACAATTGATATTGTATGGTCAATCCGTTGGCAGCGGTCCCACACTTGACCTTGCTTCAAGGATATCAGAATTGAGAGGTGTTGTGTTGCATAGTCCAATTTTGTCGGGGTTGAGAGTACTATACCCTGTAAAACGGACATATTGGTTTGATATTTATAAGAATATTGATAAAATTGGCATGGTCAAATGTCCTGTTTTGGTTATCCATGGCACAGCAGATGAAGTTGTAGATGTGTCCCATGGAAAACAGCTATGGGAACTTTGCAAGGTAAAGTATGAACCCTTGTGGGTAAGTGGAGGTGGACATTGTAATCTTGAGCTTTACCCAGAGTTCATTAAACACCTAAAGAAATTTGTACAGACACTTGGAAAACCTAAACCAACTACTGCAAATGGTTCCGAAAAGGAAGCTGTAGTTGAAACTGAGAATCAAAGCAACAAATCAAGCAAAGAATCAGAAACTGGAACTTCTAGTACTTCTGAATTGAGTACAGAAATTCCTGAAGCTTCCAGAAACAGTTTAGATAGCCGTCTTAAAAAGTCTAAAAAACCAAACAAACCAGAGAAATCTCGAATGAGCACAGATCATGTTGATAGGTTTAGGAGAAGAAAGGGGTTAGTTTGGTAG
Protein sequence

>MsG0680031952.01.T01

MGGVTSSIAAKFAFFPPQPPSYTLTVSESTSTTSTATAAAENGTSPVTKLSIPEVPMKENVDVVKVKTRRGNEIVAVYVKYHRPACTMLYSHGNAADLGQMFELFVELSNRLRINVMGYDYSGYGQSTGKPTEYNTYADIEAAYKCLKEQYGVKDEQLILYGQSVGSGPTLDLASRISELRGVVLHSPILSGLRVLYPVKRTYWFDIYKNIDKIGMVKCPVLVIHGTADEVVDVSHGKQLWELCKVKYEPLWVSGGGHCNLELYPEFIKHLKKFVQTLGKPKPTTANGSEKEAVVETENQSNKSSKESETGTSSTSELSTEIPEASRNSLDSRLKKSKKPNKPEKSRMSTDHVDRFRRRKGLVW*