AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031303.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031303.01.T01 MTR_6g027790 86.667 345 3 2 1 345 1 302 0.0 588
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031303.01.T01 AT5G55000 70.262 343 56 3 3 345 2 298 4.88e-168 470
MsG0680031303.01.T01 AT5G55000 75.658 304 51 2 3 306 2 282 2.69e-165 462

Find 89 sgRNAs with CRISPR-Local

Find 520 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCGAGGGGTTAATCTTTC+TGG 0.140143 6:+17714875 MsG0680031303.01.T01:CDS
TTCATTAGTATTTGCTTCTA+TGG 0.179621 6:+17720277 MsG0680031303.01.T01:three_prime_UTR
AAATCTTCGTGGTGCTTTAT+TGG 0.215956 6:+17716027 MsG0680031303.01.T01:CDS
CGGAGCAATCAGATAATATT+TGG 0.225108 6:+17720033 MsG0680031303.01.T01:exon
CTTCTTCCTTCCTCTGATTA+AGG 0.228729 6:-17714787 None:intergenic
ATCTTCAATGTGCAAAGTTC+CGG 0.269312 6:+17715464 MsG0680031303.01.T01:CDS
TTAGGGATTGTGTACGTTAT+TGG 0.274793 6:-17711816 None:intergenic
TTGTAAGGAGGAAGCCATTT+AGG 0.294491 6:+17720245 MsG0680031303.01.T01:intron
TAGGGATTGTGTACGTTATT+GGG 0.299856 6:-17711815 None:intergenic
TTTGTTGATTTGTTTGTATC+TGG 0.300113 6:+17720300 MsG0680031303.01.T01:three_prime_UTR
TCGCAGGAGGGAAGAAATTC+TGG 0.301822 6:+17711708 MsG0680031303.01.T01:intron
CTGAATATACAGAGCTGTTA+AGG 0.304499 6:+17714047 MsG0680031303.01.T01:CDS
ATGAACAAGAAAAGCCTAAA+TGG 0.304661 6:-17720259 None:intergenic
CCGGCCATTGATTGATGTTA+TGG 0.316140 6:+17720186 MsG0680031303.01.T01:three_prime_UTR
CTTCGTGGTGCTTTATTGGC+TGG 0.321965 6:+17716031 MsG0680031303.01.T01:CDS
TAGTGAAGATGTGAATTTAC+TGG 0.335318 6:+17716001 MsG0680031303.01.T01:intron
TCCTCTGATTAAGGACATCT+TGG 0.341120 6:-17714778 None:intergenic
TCTGATTGCTCCGAGCAAAT+TGG 0.346394 6:-17720023 None:intergenic
GACACATTCTCAATTGGTTA+AGG 0.350607 6:+17713996 MsG0680031303.01.T01:CDS
TCTGGAAGGAGCTAATTTAA+AGG 0.354617 6:+17718229 MsG0680031303.01.T01:CDS
CAATCTGGAGGGAGCTAATC+TGG 0.361067 6:+17718211 MsG0680031303.01.T01:CDS
TCTCTAAACTGGTAGATTCT+TGG 0.376383 6:+17714906 MsG0680031303.01.T01:CDS
AAATGTTAGGGGCTTATAGA+TGG 0.404279 6:+17714752 MsG0680031303.01.T01:intron
TCTTCAATGTGCAAAGTTCC+GGG 0.410243 6:+17715465 MsG0680031303.01.T01:CDS
TTCCTTCCTTTGTGCGATGA+AGG 0.421591 6:+17711513 MsG0680031303.01.T01:exon
ACTTCAGACACATTCTCAAT+TGG 0.427288 6:+17713990 MsG0680031303.01.T01:CDS
AATAAATAATATTGAGAAGT+GGG 0.428212 6:+17720072 MsG0680031303.01.T01:three_prime_UTR
TGGCATCGACCTCTCTAAAC+TGG 0.430625 6:+17714895 MsG0680031303.01.T01:CDS
ACACATTCTCAATTGGTTAA+GGG 0.441728 6:+17713997 MsG0680031303.01.T01:CDS
CAGATTAGCTCCCTCCAGAT+TGG 0.453075 6:-17718210 None:intergenic
TGTTAGAGAAGATCGTTAAC+AGG 0.453758 6:-17720214 None:intergenic
TTCGTGGTGCTTTATTGGCT+GGG 0.455181 6:+17716032 MsG0680031303.01.T01:CDS
TTGGAAGGAGCAAAGCTTGA+TGG 0.460846 6:+17719998 MsG0680031303.01.T01:CDS
GTATACAATCTGAGAGAGTC+AGG 0.465422 6:+17714852 MsG0680031303.01.T01:CDS
TGATCTTACTAATGCCAATC+TGG 0.476212 6:+17718196 MsG0680031303.01.T01:CDS
TGAATATACAGAGCTGTTAA+GGG 0.481904 6:+17714048 MsG0680031303.01.T01:CDS
TGCTCATGAAGTTGTGCAAC+CGG 0.483898 6:+17720167 MsG0680031303.01.T01:three_prime_UTR
CCTGCGATCTGCACATCTAC+AGG 0.491495 6:+17716563 MsG0680031303.01.T01:CDS
CAAAGTTGCATTATGAAAGA+TGG 0.497185 6:-17715901 None:intergenic
ATAGCAGCGAGCATTGAATC+TGG 0.498707 6:-17711761 None:intergenic
TCTGAGAGAGTCAGGTTTCG+AGG 0.507145 6:+17714860 MsG0680031303.01.T01:CDS
TTAGTAGGTTGTAGCTTCTG+TGG 0.507540 6:+17716534 MsG0680031303.01.T01:CDS
AATATTGAGAAGTGGGGATG+TGG 0.507676 6:+17720079 MsG0680031303.01.T01:three_prime_UTR
CATTAGAAATATACACAAGA+TGG 0.514038 6:-17720364 None:intergenic
CTTGATGGTGCCAATTTGCT+CGG 0.516763 6:+17720013 MsG0680031303.01.T01:CDS
CTGAGAGAGTCAGGTTTCGA+GGG 0.520649 6:+17714861 MsG0680031303.01.T01:CDS
CACAAGTAGCTGATAGTACT+CGG 0.521027 6:-17714074 None:intergenic
AAGGTTAGCATTCTTCAACT+TGG 0.521966 6:-17719110 None:intergenic
TTTATCAATCAGGACTTGGA+AGG 0.525684 6:+17719983 MsG0680031303.01.T01:intron
TTCCTTCATCGCACAAAGGA+AGG 0.527217 6:-17711515 None:intergenic
CGGTGTGGTGCCCACTCTCG+AGG 0.530711 6:+17714021 MsG0680031303.01.T01:CDS
TTATAGGATGTTGATGCTGA+GGG 0.533321 6:+17715876 MsG0680031303.01.T01:intron
AGTGAAGATGTGAATTTACT+GGG 0.537817 6:+17716002 MsG0680031303.01.T01:intron
TTTACTGGGGCAAATCTTCG+TGG 0.542197 6:+17716016 MsG0680031303.01.T01:CDS
GCGCGGAAGATAACTCGGAT+TGG 0.544255 6:-17711540 None:intergenic
CTTCAAAGTGCAAATCTACA+AGG 0.544629 6:+17716061 MsG0680031303.01.T01:CDS
CCTGTAGATGTGCAGATCGC+AGG 0.553123 6:-17716563 None:intergenic
TAATAAATAATATTGAGAAG+TGG 0.564263 6:+17720071 MsG0680031303.01.T01:three_prime_UTR
TCTGTTTACTTGTAAAACAA+AGG 0.566698 6:+17714955 MsG0680031303.01.T01:CDS
ACGAAGCGCGGAAGATAACT+CGG 0.567814 6:-17711545 None:intergenic
TGCAGGGTGGCAAACTGTAG+CGG 0.578760 6:-17719445 None:intergenic
ACAACCATAACATCAATCAA+TGG 0.582184 6:-17720190 None:intergenic
TCCGCGCTTCGTCTCAACAT+CGG 0.582992 6:+17711556 MsG0680031303.01.T01:CDS
TTTATAGGATGTTGATGCTG+AGG 0.585562 6:+17715875 MsG0680031303.01.T01:intron
TTCATCGCACAAAGGAAGGA+AGG 0.590506 6:-17711511 None:intergenic
ATAAATAATATTGAGAAGTG+GGG 0.591367 6:+17720073 MsG0680031303.01.T01:three_prime_UTR
CCATAACATCAATCAATGGC+CGG 0.594728 6:-17720186 None:intergenic
TAATCAGAGGAAGGAAGAAG+AGG 0.598826 6:+17714790 MsG0680031303.01.T01:CDS
ATATTCAGCTTCCTCGAGAG+TGG 0.599483 6:-17714032 None:intergenic
GACGCAGATAAGCTCGCTGA+AGG 0.600007 6:-17719129 None:intergenic
TCGCACAAAGGAAGGAAGGA+AGG 0.602549 6:-17711507 None:intergenic
AGATGTCCTTAATCAGAGGA+AGG 0.610696 6:+17714781 MsG0680031303.01.T01:CDS
TGGGATCTTGAGAGAGAGTG+TGG 0.611226 6:-17711796 None:intergenic
TATTCAGCTTCCTCGAGAGT+GGG 0.616194 6:-17714031 None:intergenic
ACCGATGTTGAGACGAAGCG+CGG 0.616509 6:-17711557 None:intergenic
CTTACTAATGCCAATCTGGA+GGG 0.617585 6:+17718200 MsG0680031303.01.T01:CDS
TCCAAGATGTCCTTAATCAG+AGG 0.618218 6:+17714777 MsG0680031303.01.T01:CDS
CTGGAGGGAGCTAATCTGGA+AGG 0.618931 6:+17718215 MsG0680031303.01.T01:CDS
ACAAAGGAAGGAAGGAAGGA+AGG 0.624618 6:-17711503 None:intergenic
ATGCTCGCTGCTATGTTCAG+TGG 0.625132 6:+17711770 MsG0680031303.01.T01:CDS
TCTTACTAATGCCAATCTGG+AGG 0.628999 6:+17718199 MsG0680031303.01.T01:CDS
CAGTACGTGTCAATTCTGTA+CGG 0.635724 6:-17714817 None:intergenic
ATCAGATAATATTTGGACTG+AGG 0.642240 6:+17720040 MsG0680031303.01.T01:exon
ATTCTCAATTGGTTAAGGGA+CGG 0.649000 6:+17714001 MsG0680031303.01.T01:CDS
CAATTGGTTAAGGGACGGTG+TGG 0.649884 6:+17714006 MsG0680031303.01.T01:CDS
GGAATTCCTTCATCGCACAA+AGG 0.654643 6:-17711519 None:intergenic
TGAGAGAGTCAGGTTTCGAG+GGG 0.661863 6:+17714862 MsG0680031303.01.T01:CDS
AAGAATCTACCAGTTTAGAG+AGG 0.681373 6:-17714904 None:intergenic
GTGAAGATGTGAATTTACTG+GGG 0.736367 6:+17716003 MsG0680031303.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAATGTATAAATAAA+GGG + Chr6:17712283-17712302 MsG0680031303.01.T01:intron 10.0%
!! TAAATAACAGTAATTATATA+AGG - Chr6:17718973-17718992 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + Chr6:17712282-17712301 MsG0680031303.01.T01:intron 10.0%
!! TTCAAATTATAAATCATATA+AGG - Chr6:17716605-17716624 None:intergenic 10.0%
!!! ATTTTATTTTTTGACAAAAA+AGG - Chr6:17714393-17714412 None:intergenic 10.0%
!!! CAATTTTTTATTAAAAGATA+AGG + Chr6:17716249-17716268 MsG0680031303.01.T01:intron 10.0%
!!! CATACATTTTATATAATAAA+TGG - Chr6:17714933-17714952 None:intergenic 10.0%
!!! TTATGTTAATTTCTAAAAAA+TGG - Chr6:17715264-17715283 None:intergenic 10.0%
!!! TTTTATTTTTTGACAAAAAA+GGG - Chr6:17714392-17714411 None:intergenic 10.0%
!!! TTTTGTCAAAAAATAAAATT+CGG + Chr6:17714394-17714413 MsG0680031303.01.T01:intron 10.0%
!!! TTTTTTTTAATGATTTTGTT+TGG + Chr6:17711867-17711886 MsG0680031303.01.T01:intron 10.0%
!! AAAATCATATTAATAGGAAT+TGG - Chr6:17719309-17719328 None:intergenic 15.0%
!! AAAATTGTGTCAATTAAATT+GGG - Chr6:17712247-17712266 None:intergenic 15.0%
!! AAATGATATGTAAATAACTT+CGG + Chr6:17714176-17714195 MsG0680031303.01.T01:intron 15.0%
!! AAGCGTATATATATAATATT+AGG + Chr6:17715545-17715564 MsG0680031303.01.T01:intron 15.0%
!! AATAAATAATATTGAGAAGT+GGG + Chr6:17720072-17720091 MsG0680031303.01.T01:three_prime_UTR 15.0%
!! AATATATTGATGTAAATGAT+TGG + Chr6:17715699-17715718 MsG0680031303.01.T01:intron 15.0%
!! ACATCAATATATTTATGTTA+AGG - Chr6:17715692-17715711 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + Chr6:17712284-17712303 MsG0680031303.01.T01:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG + Chr6:17712348-17712367 MsG0680031303.01.T01:intron 15.0%
!! CTATATTATGAACAAATATT+TGG + Chr6:17714593-17714612 MsG0680031303.01.T01:intron 15.0%
!! TAATAAATAATATTGAGAAG+TGG + Chr6:17720071-17720090 MsG0680031303.01.T01:three_prime_UTR 15.0%
!! TATAAATAATATATTTCCAG+AGG + Chr6:17718060-17718079 MsG0680031303.01.T01:intron 15.0%
!! TATATATATAATATTAGGCA+AGG + Chr6:17715550-17715569 MsG0680031303.01.T01:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + Chr6:17712347-17712366 MsG0680031303.01.T01:intron 15.0%
!! TTATTTATGAATGAATACAT+CGG - Chr6:17717221-17717240 None:intergenic 15.0%
!! TTTGTCAAAAAATAAAATTC+GGG + Chr6:17714395-17714414 MsG0680031303.01.T01:intron 15.0%
!!! GAAATGTTATTTTTCTATTT+TGG + Chr6:17719034-17719053 MsG0680031303.01.T01:intron 15.0%
!!! TAATTTCTAAAAAATGGTTA+AGG - Chr6:17715258-17715277 None:intergenic 15.0%
!!! TATTCAATAGAGTTTTTAAA+TGG + Chr6:17715309-17715328 MsG0680031303.01.T01:intron 15.0%
!!! TTTGTTAGATTTGTTAATTT+GGG + Chr6:17713907-17713926 MsG0680031303.01.T01:intron 15.0%
!!! TTTTCTTGATTACAATATTT+TGG + Chr6:17715786-17715805 MsG0680031303.01.T01:intron 15.0%
!!! TTTTGTTAGATTTGTTAATT+TGG + Chr6:17713906-17713925 MsG0680031303.01.T01:intron 15.0%
!! AAACAAATAATTAGGTTTCT+TGG + Chr6:17717664-17717683 MsG0680031303.01.T01:intron 20.0%
!! AAACGAATTTCAAACAAAAT+GGG - Chr6:17718814-17718833 None:intergenic 20.0%
!! AAATAAAATGAAGAAGCTTA+GGG - Chr6:17711836-17711855 None:intergenic 20.0%
!! AAATTCAAGAGATTAATGTA+AGG - Chr6:17715372-17715391 None:intergenic 20.0%
!! AACAAATAATTAGGTTTCTT+GGG + Chr6:17717665-17717684 MsG0680031303.01.T01:intron 20.0%
!! AATATATTTATGTTAAGGAC+AGG - Chr6:17715687-17715706 None:intergenic 20.0%
!! AATTCAAGAGATTAATGTAA+GGG - Chr6:17715371-17715390 None:intergenic 20.0%
!! ACTCATAAAATGAAACATTA+AGG + Chr6:17718837-17718856 MsG0680031303.01.T01:intron 20.0%
!! AGAAACAAAGCAAAAAATAA+AGG - Chr6:17714118-17714137 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + Chr6:17712380-17712399 MsG0680031303.01.T01:intron 20.0%
!! ATAAATAATATTGAGAAGTG+GGG + Chr6:17720073-17720092 MsG0680031303.01.T01:three_prime_UTR 20.0%
!! ATTATGTTTAGCAAAATTAC+AGG - Chr6:17718944-17718963 None:intergenic 20.0%
!! ATTGTAATCAAGAAAATATG+TGG - Chr6:17715782-17715801 None:intergenic 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG - Chr6:17712248-17712267 None:intergenic 20.0%
!! CACAAATTGTTTCATAATTT+GGG - Chr6:17713544-17713563 None:intergenic 20.0%
!! CCAAATTAAAAATATTATGC+CGG - Chr6:17716410-17716429 None:intergenic 20.0%
!! CTTATAAATCAACTAAATTG+TGG + Chr6:17717954-17717973 MsG0680031303.01.T01:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + Chr6:17712381-17712400 MsG0680031303.01.T01:intron 20.0%
!! TAAACGAATTTCAAACAAAA+TGG - Chr6:17718815-17718834 None:intergenic 20.0%
!! TAAATAAAATGAAGAAGCTT+AGG - Chr6:17711837-17711856 None:intergenic 20.0%
!! TAAATACTCTTAACAATACA+TGG - Chr6:17718386-17718405 None:intergenic 20.0%
!! TAAGAAGGAAAAAATTAATG+CGG - Chr6:17717571-17717590 None:intergenic 20.0%
!! TCACAAATTGTTTCATAATT+TGG - Chr6:17713545-17713564 None:intergenic 20.0%
!! TCTACAGTTTAACAATTATA+CGG - Chr6:17713886-17713905 None:intergenic 20.0%
!! TCTTAAGTATTATACAATTG+TGG + Chr6:17715171-17715190 MsG0680031303.01.T01:intron 20.0%
!! TGTGTTAAAAACATCTTAAT+TGG + Chr6:17720403-17720422 MsG0680031303.01.T01:three_prime_UTR 20.0%
!! TTAAATGGTAAATTTATGCA+GGG + Chr6:17715324-17715343 MsG0680031303.01.T01:intron 20.0%
!! TTAGTAAAAATAAAAGCTAC+AGG + Chr6:17712522-17712541 MsG0680031303.01.T01:intron 20.0%
!! TTCTAATAAGTTAATTCAAG+TGG - Chr6:17712492-17712511 None:intergenic 20.0%
!! TTTAAATGGTAAATTTATGC+AGG + Chr6:17715323-17715342 MsG0680031303.01.T01:intron 20.0%
!! TTTCCATATAAGAAACTTAA+AGG - Chr6:17714676-17714695 None:intergenic 20.0%
!!! ATACCTTTAAGTTTCTTATA+TGG + Chr6:17714670-17714689 MsG0680031303.01.T01:intron 20.0%
!!! ATGATTTTTATTTCAAGTGA+TGG + Chr6:17718083-17718102 MsG0680031303.01.T01:intron 20.0%
!!! ATTTTTTCAATCAAGATATC+AGG + Chr6:17712188-17712207 MsG0680031303.01.T01:intron 20.0%
!!! CTATTAATATGATTTTCTGA+GGG + Chr6:17719313-17719332 MsG0680031303.01.T01:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + Chr6:17712417-17712436 MsG0680031303.01.T01:intron 20.0%
!!! GGTAGAAAATTCAATTTTTT+TGG + Chr6:17713095-17713114 MsG0680031303.01.T01:intron 20.0%
!!! TAAAACCTATGTGATTTTAT+AGG + Chr6:17715860-17715879 MsG0680031303.01.T01:intron 20.0%
!!! TACATTAATCTCTTGAATTT+TGG + Chr6:17715372-17715391 MsG0680031303.01.T01:intron 20.0%
!!! TATAAAATCACATAGGTTTT+AGG - Chr6:17715861-17715880 None:intergenic 20.0%
!!! TATTAATATGATTTTCTGAG+GGG + Chr6:17719314-17719333 MsG0680031303.01.T01:intron 20.0%
!!! TGATTTTTATTTCAAGTGAT+GGG + Chr6:17718084-17718103 MsG0680031303.01.T01:intron 20.0%
!!! TGTTATCTAATATTTTTCAC+AGG - Chr6:17718493-17718512 None:intergenic 20.0%
!!! TTAATGTTTCATTTTATGAG+TGG - Chr6:17718838-17718857 None:intergenic 20.0%
!!! TTGTTAGATTTGTTAATTTG+GGG + Chr6:17713908-17713927 MsG0680031303.01.T01:intron 20.0%
!!! TTTTCAAAATAGCAAAAATC+AGG - Chr6:17719284-17719303 None:intergenic 20.0%
!!! TTTTTCAATTAAGATTGCAA+GGG - Chr6:17712792-17712811 None:intergenic 20.0%
!!! TTTTTTCAATTAAGATTGCA+AGG - Chr6:17712793-17712812 None:intergenic 20.0%
! AAATGAGCTTACAAGATATT+GGG + Chr6:17712582-17712601 MsG0680031303.01.T01:intron 25.0%
! AACATCCTATAAAATCACAT+AGG - Chr6:17715868-17715887 None:intergenic 25.0%
! AAGAAGATTATATCAGATAG+AGG + Chr6:17713342-17713361 MsG0680031303.01.T01:intron 25.0%
! AAGGATGATATGGTTATATT+AGG + Chr6:17718856-17718875 MsG0680031303.01.T01:intron 25.0%
! AATACATCGGTAAGAAAATT+GGG - Chr6:17717208-17717227 None:intergenic 25.0%
! AATCACGTGTATTTAAATTC+AGG + Chr6:17719790-17719809 MsG0680031303.01.T01:intron 25.0%
! AATCATATCAAATACCTGAT+TGG - Chr6:17717771-17717790 None:intergenic 25.0%
! AATTAGACAATAGTCTATGT+AGG - Chr6:17717903-17717922 None:intergenic 25.0%
! ACAAAGATTTCACCAAATTA+AGG - Chr6:17717988-17718007 None:intergenic 25.0%
! ACAAATAATTAGGTTTCTTG+GGG + Chr6:17717666-17717685 MsG0680031303.01.T01:intron 25.0%
! AGAAGATTATATCAGATAGA+GGG + Chr6:17713343-17713362 MsG0680031303.01.T01:intron 25.0%
! AGACAAATGAACAACATTTA+CGG - Chr6:17716488-17716507 None:intergenic 25.0%
! AGATAACAAATGCATTTGAT+AGG + Chr6:17714333-17714352 MsG0680031303.01.T01:intron 25.0%
! AGGATGATATGGTTATATTA+GGG + Chr6:17718857-17718876 MsG0680031303.01.T01:intron 25.0%
! ATAAAATTTGCCATTCATTC+AGG - Chr6:17713023-17713042 None:intergenic 25.0%
! ATAAGCTATAAGCACAAAAA+TGG - Chr6:17712623-17712642 None:intergenic 25.0%
! ATAATAATTACTTCACCTTG+AGG - Chr6:17713844-17713863 None:intergenic 25.0%
! ATATAGAAATGACAGACTTT+GGG + Chr6:17713455-17713474 MsG0680031303.01.T01:intron 25.0%
! ATCACGTGTATTTAAATTCA+GGG + Chr6:17719791-17719810 MsG0680031303.01.T01:intron 25.0%
! ATGAAACATTAAGGATGATA+TGG + Chr6:17718846-17718865 MsG0680031303.01.T01:intron 25.0%
! ATTCATAGGTTTGTAGTATT+TGG + Chr6:17712090-17712109 MsG0680031303.01.T01:intron 25.0%
! CAATAAGTAAATATCCCAAA+TGG - Chr6:17713778-17713797 None:intergenic 25.0%
! CATTAGAAATATACACAAGA+TGG - Chr6:17720367-17720386 None:intergenic 25.0%
! CCCACAATTAAAAATGAATT+CGG - Chr6:17714311-17714330 None:intergenic 25.0%
! CCTCAGAAAATCATATTAAT+AGG - Chr6:17719315-17719334 None:intergenic 25.0%
! CTAAACATACAAGACAAAAT+AGG - Chr6:17717245-17717264 None:intergenic 25.0%
! CTTCATTGAAATCATTTCAA+TGG + Chr6:17719005-17719024 MsG0680031303.01.T01:intron 25.0%
! GATAAGGGAAATATCAATAA+TGG + Chr6:17716265-17716284 MsG0680031303.01.T01:intron 25.0%
! GCACTAACAAACAAATAATT+AGG + Chr6:17717656-17717675 MsG0680031303.01.T01:intron 25.0%
! GGAAAGATGAAATAATTAAG+AGG - Chr6:17715981-17716000 None:intergenic 25.0%
! GTTAAGTAAATTATCAACCT+TGG + Chr6:17718631-17718650 MsG0680031303.01.T01:intron 25.0%
! TAAAATTTGCCATTCATTCA+GGG - Chr6:17713022-17713041 None:intergenic 25.0%
! TAAGCTATAAGCACAAAAAT+GGG - Chr6:17712622-17712641 None:intergenic 25.0%
! TAATATTTACAACGTTGAGT+GGG - Chr6:17717454-17717473 None:intergenic 25.0%
! TACAAACCAAGAAAATTACT+TGG - Chr6:17716443-17716462 None:intergenic 25.0%
! TAGAAACTATTGTAGAAACT+TGG + Chr6:17713272-17713291 MsG0680031303.01.T01:intron 25.0%
! TATATAATATTAGGCAAGGT+AGG + Chr6:17715554-17715573 MsG0680031303.01.T01:intron 25.0%
! TATTAAAAAACCCTATAAGC+TGG - Chr6:17712722-17712741 None:intergenic 25.0%
! TCTGTTTACTTGTAAAACAA+AGG + Chr6:17714955-17714974 MsG0680031303.01.T01:CDS 25.0%
! TGAAAGTCTAAACTCATAAA+CGG - Chr6:17715614-17715633 None:intergenic 25.0%
! TTCAGTGTAATTATATGTGT+CGG + Chr6:17712010-17712029 MsG0680031303.01.T01:intron 25.0%
! TTCATTAGTATTTGCTTCTA+TGG + Chr6:17720277-17720296 MsG0680031303.01.T01:three_prime_UTR 25.0%
! TTCTTAAAAATCTCACATGT+AGG + Chr6:17713677-17713696 MsG0680031303.01.T01:intron 25.0%
! TTGAAATAAAAATCATCCTC+TGG - Chr6:17718079-17718098 None:intergenic 25.0%
!! AACTTAAAGGTATAACATCA+TGG - Chr6:17714663-17714682 None:intergenic 25.0%
!! ATCATATAAGGATTCAAGTT+TGG - Chr6:17716593-17716612 None:intergenic 25.0%
!! ATGAATTTTTGTCCTAATGA+AGG + Chr6:17717742-17717761 MsG0680031303.01.T01:intron 25.0%
!! CATTAATTGTAAAGAAGTGT+CGG - Chr6:17717384-17717403 None:intergenic 25.0%
!! CATTATCCAAGTAATTTTCT+TGG + Chr6:17716434-17716453 MsG0680031303.01.T01:intron 25.0%
!! CCTATTAATATGATTTTCTG+AGG + Chr6:17719312-17719331 MsG0680031303.01.T01:intron 25.0%
!! GTATTTAAATTCAGGGTTTT+TGG + Chr6:17719798-17719817 MsG0680031303.01.T01:intron 25.0%
!! GTTTCTTTTATAGTTCTTCT+AGG - Chr6:17713397-17713416 None:intergenic 25.0%
!! TATTACTTGGATATGAGTTT+TGG + Chr6:17714982-17715001 MsG0680031303.01.T01:intron 25.0%
!! TATTTGAGAATGTTAGTTCT+CGG + Chr6:17713711-17713730 MsG0680031303.01.T01:intron 25.0%
!! TATTTTGTATTGGACAAAGA+AGG - Chr6:17713582-17713601 None:intergenic 25.0%
!! TTATGTCTTATAAGCTTGTT+TGG + Chr6:17712639-17712658 MsG0680031303.01.T01:intron 25.0%
!! TTTGGGATATTTACTTATTG+TGG + Chr6:17713778-17713797 MsG0680031303.01.T01:intron 25.0%
!!! AAGTTTTTTCCTACTTGTTT+AGG + Chr6:17714439-17714458 MsG0680031303.01.T01:intron 25.0%
!!! ACTTATTTTTACCAGCTTAT+AGG + Chr6:17712708-17712727 MsG0680031303.01.T01:intron 25.0%
!!! CCGAATTCATTTTTAATTGT+GGG + Chr6:17714308-17714327 MsG0680031303.01.T01:intron 25.0%
!!! CCGGCATAATATTTTTAATT+TGG + Chr6:17716407-17716426 MsG0680031303.01.T01:intron 25.0%
!!! CTTATTTTTACCAGCTTATA+GGG + Chr6:17712709-17712728 MsG0680031303.01.T01:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + Chr6:17712416-17712435 MsG0680031303.01.T01:intron 25.0%
!!! TCCGAATTCATTTTTAATTG+TGG + Chr6:17714307-17714326 MsG0680031303.01.T01:intron 25.0%
!!! TTTGTTGATTTGTTTGTATC+TGG + Chr6:17720300-17720319 MsG0680031303.01.T01:three_prime_UTR 25.0%
!!! TTTTCAGGATTTATCATTTG+TGG + Chr6:17715396-17715415 MsG0680031303.01.T01:intron 25.0%
AAACAAAGGTCGTTATTACT+TGG + Chr6:17714969-17714988 MsG0680031303.01.T01:intron 30.0%
AAAGAAACTGAAACTTCTTC+TGG + Chr6:17714694-17714713 MsG0680031303.01.T01:intron 30.0%
AAATAATTAGGTTTCTTGGG+GGG + Chr6:17717668-17717687 MsG0680031303.01.T01:intron 30.0%
AAATCAATTCCCTATATCTC+AGG + Chr6:17719069-17719088 MsG0680031303.01.T01:intron 30.0%
AACACATTAATGTCATCCTT+TGG - Chr6:17715212-17715231 None:intergenic 30.0%
AACCTATAGAAGTCTCAATA+TGG - Chr6:17717123-17717142 None:intergenic 30.0%
AAGATTTCACCAAATTAAGG+TGG - Chr6:17717985-17718004 None:intergenic 30.0%
AATACAGTGTTGTCAAATAG+CGG + Chr6:17719568-17719587 MsG0680031303.01.T01:intron 30.0%
AATATTTACAACGTTGAGTG+GGG - Chr6:17717453-17717472 None:intergenic 30.0%
AATCAATTCCCTATATCTCA+GGG + Chr6:17719070-17719089 MsG0680031303.01.T01:intron 30.0%
AATGACAACATTAGAGAATG+AGG + Chr6:17713236-17713255 MsG0680031303.01.T01:intron 30.0%
ACAACCATAACATCAATCAA+TGG - Chr6:17720193-17720212 None:intergenic 30.0%
ACACATTCTCAATTGGTTAA+GGG + Chr6:17713997-17714016 MsG0680031303.01.T01:CDS 30.0%
ACACTAGATAAAGCAAAGTT+TGG - Chr6:17715052-17715071 None:intergenic 30.0%
AGTAAATTCACATCTTCACT+AGG - Chr6:17716002-17716021 None:intergenic 30.0%
AGTCAAATCATTAGAAGTAG+AGG + Chr6:17713367-17713386 MsG0680031303.01.T01:intron 30.0%
AGTGAAGATGTGAATTTACT+GGG + Chr6:17716002-17716021 MsG0680031303.01.T01:intron 30.0%
ATAACCAGTCTTCATACTTA+GGG + Chr6:17715499-17715518 MsG0680031303.01.T01:intron 30.0%
ATATATACGCTTGAATGAAC+TGG - Chr6:17715537-17715556 None:intergenic 30.0%
ATCAGATAATATTTGGACTG+AGG + Chr6:17720040-17720059 MsG0680031303.01.T01:exon 30.0%
ATGAACAAGAAAAGCCTAAA+TGG - Chr6:17720262-17720281 None:intergenic 30.0%
ATGATATGGTTATATTAGGG+AGG + Chr6:17718860-17718879 MsG0680031303.01.T01:intron 30.0%
ATGATCACTTGCAAAATGTT+AGG + Chr6:17714739-17714758 MsG0680031303.01.T01:intron 30.0%
ATTTCATTTCTGAATTTCGC+AGG + Chr6:17711692-17711711 MsG0680031303.01.T01:intron 30.0%
CAAAGTTGCATTATGAAAGA+TGG - Chr6:17715904-17715923 None:intergenic 30.0%
CAAATAATTAGGTTTCTTGG+GGG + Chr6:17717667-17717686 MsG0680031303.01.T01:intron 30.0%
CAAATGAGCTTACAAGATAT+TGG + Chr6:17712581-17712600 MsG0680031303.01.T01:intron 30.0%
CAAATGGTATCTATAAGACA+AGG + Chr6:17717484-17717503 MsG0680031303.01.T01:intron 30.0%
CAAGTCCTGATTGATAAAAA+AGG - Chr6:17719981-17720000 None:intergenic 30.0%
CCTATATTGGTGAAAGTAAT+AGG + Chr6:17718266-17718285 MsG0680031303.01.T01:intron 30.0%
CCTATTACTTTCACCAATAT+AGG - Chr6:17718269-17718288 None:intergenic 30.0%
CGACACTTCTTTACAATTAA+TGG + Chr6:17717382-17717401 MsG0680031303.01.T01:intron 30.0%
CTACCTTATAGAATCACATT+GGG + Chr6:17719766-17719785 MsG0680031303.01.T01:intron 30.0%
CTATTGTAGAAACTTGGATT+AGG + Chr6:17713278-17713297 MsG0680031303.01.T01:intron 30.0%
CTCATTTGACCAAAAAAAAC+TGG - Chr6:17712569-17712588 None:intergenic 30.0%
CTTTATACTTACGCATAAGA+GGG - Chr6:17713076-17713095 None:intergenic 30.0%
GAATACATCGGTAAGAAAAT+TGG - Chr6:17717209-17717228 None:intergenic 30.0%
GACAAATGAACAACATTTAC+GGG - Chr6:17716487-17716506 None:intergenic 30.0%
GAGATATCAAGAACCTATAT+TGG + Chr6:17718253-17718272 MsG0680031303.01.T01:intron 30.0%
GATATAGAAATGACAGACTT+TGG + Chr6:17713454-17713473 MsG0680031303.01.T01:intron 30.0%
GGAAGTTGTAAATTAAGAAG+AGG - Chr6:17717606-17717625 None:intergenic 30.0%
GTAATATTTACAACGTTGAG+TGG - Chr6:17717455-17717474 None:intergenic 30.0%
GTACGTATAGAAACCATATA+AGG + Chr6:17717147-17717166 MsG0680031303.01.T01:intron 30.0%
GTTCAGCAATGATACATATA+TGG - Chr6:17718591-17718610 None:intergenic 30.0%
TAATGTCTAACTCATCTGAA+GGG + Chr6:17713488-17713507 MsG0680031303.01.T01:intron 30.0%
TAGATAAAGCAAAGTTTGGA+GGG - Chr6:17715048-17715067 None:intergenic 30.0%
TAGGTTATAGGAATTCAATG+CGG - Chr6:17714720-17714739 None:intergenic 30.0%
TAGTATTTGGCAAGAATTAG+CGG + Chr6:17712103-17712122 MsG0680031303.01.T01:intron 30.0%
TAGTGAAGATGTGAATTTAC+TGG + Chr6:17716001-17716020 MsG0680031303.01.T01:intron 30.0%
TAGTTGCTCTTAATCTTAAG+AGG - Chr6:17716941-17716960 None:intergenic 30.0%
TATAACCAGTCTTCATACTT+AGG + Chr6:17715498-17715517 MsG0680031303.01.T01:intron 30.0%
TCGGAAAAAAGAAGAAACTT+CGG - Chr6:17714292-17714311 None:intergenic 30.0%
TCTAACATACTGTCTTTGTA+AGG + Chr6:17720230-17720249 MsG0680031303.01.T01:intron 30.0%
TGAATATACAGAGCTGTTAA+GGG + Chr6:17714048-17714067 MsG0680031303.01.T01:CDS 30.0%
TGACATTAATGTGTTACCTT+AGG + Chr6:17715217-17715236 MsG0680031303.01.T01:intron 30.0%
TGACTATACCTAGTTGAAAA+AGG - Chr6:17716970-17716989 None:intergenic 30.0%
TGATCACTTGCAAAATGTTA+GGG + Chr6:17714740-17714759 MsG0680031303.01.T01:intron 30.0%
TGGTAGAATATTGCCTTATA+TGG - Chr6:17717163-17717182 None:intergenic 30.0%
TGGTTATATTCATACTTACC+CGG - Chr6:17715486-17715505 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + Chr6:17712291-17712310 MsG0680031303.01.T01:intron 30.0%
TGTTATATATAACGACAGAC+AGG - Chr6:17716788-17716807 None:intergenic 30.0%
TTAATCAACACACAACACTA+GGG - Chr6:17718130-17718149 None:intergenic 30.0%
TTAATCTTAAGAGGAGTTAG+AGG - Chr6:17716932-17716951 None:intergenic 30.0%
TTAATGTCTAACTCATCTGA+AGG + Chr6:17713487-17713506 MsG0680031303.01.T01:intron 30.0%
TTACCCAATGTGATTCTATA+AGG - Chr6:17719772-17719791 None:intergenic 30.0%
TTCGAGATACAGTATGTAAA+CGG + Chr6:17719161-17719180 MsG0680031303.01.T01:intron 30.0%
TTCTACAATAGTTTCTACGT+AGG - Chr6:17713269-17713288 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG - Chr6:17712243-17712262 None:intergenic 30.0%
TTTAATCAACACACAACACT+AGG - Chr6:17718131-17718150 None:intergenic 30.0%
! AAATCTAGAGTTTAATGTGC+TGG + Chr6:17713426-17713445 MsG0680031303.01.T01:intron 30.0%
! AACATTTTGCAAGTGATCAT+AGG - Chr6:17714739-17714758 None:intergenic 30.0%
! AATTTTGTCAAACCTCAAGT+GGG - Chr6:17718779-17718798 None:intergenic 30.0%
! AATTTTTGTCCTAATGAAGG+TGG + Chr6:17717745-17717764 MsG0680031303.01.T01:intron 30.0%
! AGTTTTGCAAATGTGAATCA+GGG + Chr6:17718890-17718909 MsG0680031303.01.T01:intron 30.0%
! CATTTTCCCTCATATTAAAC+AGG - Chr6:17713643-17713662 None:intergenic 30.0%
! CGTTTTTCATAAAGATTGTG+TGG + Chr6:17717517-17717536 MsG0680031303.01.T01:intron 30.0%
! CTCTTGAATTTTGGATTTTC+AGG + Chr6:17715381-17715400 MsG0680031303.01.T01:intron 30.0%
! GGATAGTAAGTTATAGCTTT+TGG - Chr6:17717877-17717896 None:intergenic 30.0%
! TAAGAGGGAAACTAACTTTT+TGG - Chr6:17713061-17713080 None:intergenic 30.0%
! TGATTGAATTTGTGGTGTTT+TGG - Chr6:17712886-17712905 None:intergenic 30.0%
! TGCTATTTACGTGAACAAAT+AGG + Chr6:17716329-17716348 MsG0680031303.01.T01:intron 30.0%
! TGTTGACTAATGTAGATGTT+TGG + Chr6:17715732-17715751 MsG0680031303.01.T01:intron 30.0%
! TTGAAATGGGTCAGTTATTT+TGG + Chr6:17712394-17712413 MsG0680031303.01.T01:intron 30.0%
! TTGAGACTTCTATAGGTTTT+TGG + Chr6:17717125-17717144 MsG0680031303.01.T01:intron 30.0%
! TTTTCAGATGCTTGTTTAGT+AGG + Chr6:17716519-17716538 MsG0680031303.01.T01:intron 30.0%
!! ACACATGGACTATTTTGTAT+TGG - Chr6:17713592-17713611 None:intergenic 30.0%
!! ACTTCAGTTTTGTCAATACT+TGG + Chr6:17715078-17715097 MsG0680031303.01.T01:intron 30.0%
!! TAGTGTTGTGTGTTGATTAA+AGG + Chr6:17718130-17718149 MsG0680031303.01.T01:intron 30.0%
!! TAGTTCTAAGCCAATACAAA+AGG - Chr6:17719483-17719502 None:intergenic 30.0%
!! TAGTTTTGCAAATGTGAATC+AGG + Chr6:17718889-17718908 MsG0680031303.01.T01:intron 30.0%
!! TATGTTTTTGTTGATAGGGA+TGG + Chr6:17713962-17713981 MsG0680031303.01.T01:CDS 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG + Chr6:17712395-17712414 MsG0680031303.01.T01:intron 30.0%
!!! CTTTTTTATCAATCAGGACT+TGG + Chr6:17719979-17719998 MsG0680031303.01.T01:intron 30.0%
!!! GCTATTTTGATATACTCCAA+TGG - Chr6:17716230-17716249 None:intergenic 30.0%
!!! TACAAAAGCCTTTTTCAACT+AGG + Chr6:17716959-17716978 MsG0680031303.01.T01:intron 30.0%
!!! TCGTTCCTTTTTTATCAATC+AGG + Chr6:17719973-17719992 MsG0680031303.01.T01:intron 30.0%
AAATCTTCGTGGTGCTTTAT+TGG + Chr6:17716027-17716046 MsG0680031303.01.T01:CDS 35.0%
AAATGTTAGGGGCTTATAGA+TGG + Chr6:17714752-17714771 MsG0680031303.01.T01:intron 35.0%
AACACAAGGAAATAGCATGT+GGG + Chr6:17719895-17719914 MsG0680031303.01.T01:intron 35.0%
AACATACTGTCTTTGTAAGG+AGG + Chr6:17720233-17720252 MsG0680031303.01.T01:intron 35.0%
AACCTTATCTCACTATGACA+TGG + Chr6:17716198-17716217 MsG0680031303.01.T01:intron 35.0%
AACTACAGCATAAGATGTGT+TGG - Chr6:17718462-17718481 None:intergenic 35.0%
AAGAATCTACCAGTTTAGAG+AGG - Chr6:17714907-17714926 None:intergenic 35.0%
AAGCTAGCTGATTGAATTTG+TGG - Chr6:17712894-17712913 None:intergenic 35.0%
AAGGGGTAAATAACCAATGT+GGG + Chr6:17713141-17713160 MsG0680031303.01.T01:intron 35.0%
AAGGTTAGCATTCTTCAACT+TGG - Chr6:17719113-17719132 None:intergenic 35.0%
AATAGCATGTGGGAAAAAGA+TGG + Chr6:17719905-17719924 MsG0680031303.01.T01:intron 35.0%
ACCTCAAAAGGTTAAGAGAT+AGG - Chr6:17717345-17717364 None:intergenic 35.0%
ACGAAGACCTGTTTAATATG+AGG + Chr6:17713633-17713652 MsG0680031303.01.T01:intron 35.0%
ACTTCAGACACATTCTCAAT+TGG + Chr6:17713990-17714009 MsG0680031303.01.T01:CDS 35.0%
AGAAAATGGGTCAGTTATTC+CGG + Chr6:17712430-17712449 MsG0680031303.01.T01:intron 35.0%
AGAAATGACAAGGAAACATG+TGG - Chr6:17716148-17716167 None:intergenic 35.0%
AGATAAAGCAAAGTTTGGAG+GGG - Chr6:17715047-17715066 None:intergenic 35.0%
AGATTAATGCCTTGCAACAT+GGG + Chr6:17718664-17718683 MsG0680031303.01.T01:intron 35.0%
AGCAATGATACATATATGGC+TGG - Chr6:17718587-17718606 None:intergenic 35.0%
AGGCTAGATGTTTAATTACC+CGG + Chr6:17718150-17718169 MsG0680031303.01.T01:intron 35.0%
AGGTAACTAGCATCTTAAGA+AGG - Chr6:17717586-17717605 None:intergenic 35.0%
ATAAGCACATGAGAAAGTGA+CGG - Chr6:17712687-17712706 None:intergenic 35.0%
ATCCATGTCATAGTGAGATA+AGG - Chr6:17716203-17716222 None:intergenic 35.0%
ATCTTCAATGTGCAAAGTTC+CGG + Chr6:17715464-17715483 MsG0680031303.01.T01:CDS 35.0%
ATTCTCAATTGGTTAAGGGA+CGG + Chr6:17714001-17714020 MsG0680031303.01.T01:CDS 35.0%
CAACGTTGTAAATATTACCC+TGG + Chr6:17717457-17717476 MsG0680031303.01.T01:intron 35.0%
CATTAATGTGTTACCTTAGG+TGG + Chr6:17715220-17715239 MsG0680031303.01.T01:intron 35.0%
CCAATGTGATTCTATAAGGT+AGG - Chr6:17719768-17719787 None:intergenic 35.0%
CCTACCTTATAGAATCACAT+TGG + Chr6:17719765-17719784 MsG0680031303.01.T01:intron 35.0%
CCTCTTATGCGTAAGTATAA+AGG + Chr6:17713074-17713093 MsG0680031303.01.T01:intron 35.0%
CCTTTATACTTACGCATAAG+AGG - Chr6:17713077-17713096 None:intergenic 35.0%
CGAAGACCTGTTTAATATGA+GGG + Chr6:17713634-17713653 MsG0680031303.01.T01:intron 35.0%
CGGAAAAAAGAAGAAACTTC+GGG - Chr6:17714291-17714310 None:intergenic 35.0%
CGGAGCAATCAGATAATATT+TGG + Chr6:17720033-17720052 MsG0680031303.01.T01:exon 35.0%
CTAAGACGTTAAGACCTATT+TGG - Chr6:17713740-17713759 None:intergenic 35.0%
CTAGATAAAGCAAAGTTTGG+AGG - Chr6:17715049-17715068 None:intergenic 35.0%
CTCCATATTGAGACTTCTAT+AGG + Chr6:17717118-17717137 MsG0680031303.01.T01:intron 35.0%
CTGAATATACAGAGCTGTTA+AGG + Chr6:17714047-17714066 MsG0680031303.01.T01:CDS 35.0%
CTTCAAAGTGCAAATCTACA+AGG + Chr6:17716061-17716080 MsG0680031303.01.T01:CDS 35.0%
GACACATTCTCAATTGGTTA+AGG + Chr6:17713996-17714015 MsG0680031303.01.T01:CDS 35.0%
GATCACTTGCAAAATGTTAG+GGG + Chr6:17714741-17714760 MsG0680031303.01.T01:intron 35.0%
GCAAAATAGCAGAAATGACA+AGG - Chr6:17716158-17716177 None:intergenic 35.0%
GCAAGCTTTGCTTAATATTC+AGG + Chr6:17718559-17718578 MsG0680031303.01.T01:intron 35.0%
GCATAAATTATGCCAACACA+AGG + Chr6:17719881-17719900 MsG0680031303.01.T01:intron 35.0%
GTCAATACTTGGAAGATGAA+AGG + Chr6:17715089-17715108 MsG0680031303.01.T01:intron 35.0%
GTCTGAAAGCTAACAATAAG+AGG - Chr6:17719856-17719875 None:intergenic 35.0%
GTGAAGATGTGAATTTACTG+GGG + Chr6:17716003-17716022 MsG0680031303.01.T01:intron 35.0%
GTTTCTTGTCATGACCATTT+GGG + Chr6:17713761-17713780 MsG0680031303.01.T01:intron 35.0%
TAAGGGGTAAATAACCAATG+TGG + Chr6:17713140-17713159 MsG0680031303.01.T01:intron 35.0%
TAATGTATGTTTGCACTGCA+GGG + Chr6:17713938-17713957 MsG0680031303.01.T01:intron 35.0%
TACAAGATATTGGGTCTGTT+TGG + Chr6:17712591-17712610 MsG0680031303.01.T01:intron 35.0%
TAGGGATTGTGTACGTTATT+GGG - Chr6:17711818-17711837 None:intergenic 35.0%
TATGACATGGATCAATCCAT+TGG + Chr6:17716211-17716230 MsG0680031303.01.T01:intron 35.0%
TCAAAAGGTTAAGAGATAGG+AGG - Chr6:17717342-17717361 None:intergenic 35.0%
TCAAGAGATTAATGTAAGGG+TGG - Chr6:17715368-17715387 None:intergenic 35.0%
TCATTAAGAGCAATCTGCAA+TGG + Chr6:17714535-17714554 MsG0680031303.01.T01:intron 35.0%
TCGAGATACAGTATGTAAAC+GGG + Chr6:17719162-17719181 MsG0680031303.01.T01:intron 35.0%
TCTCAAATTATTAGCCGTGT+CGG - Chr6:17711979-17711998 None:intergenic 35.0%
TCTCTAAACTGGTAGATTCT+TGG + Chr6:17714906-17714925 MsG0680031303.01.T01:CDS 35.0%
TCTGGAAGGAGCTAATTTAA+AGG + Chr6:17718229-17718248 MsG0680031303.01.T01:CDS 35.0%
TGATCTTACTAATGCCAATC+TGG + Chr6:17718196-17718215 MsG0680031303.01.T01:CDS 35.0%
TGCAAGTGATCATAGGTTAT+AGG - Chr6:17714732-17714751 None:intergenic 35.0%
TGGAGGGGCTATATATATAA+TGG - Chr6:17715032-17715051 None:intergenic 35.0%
TGTCATAGTGAGATAAGGTT+TGG - Chr6:17716198-17716217 None:intergenic 35.0%
TGTTAGAGAAGATCGTTAAC+AGG - Chr6:17720217-17720236 None:intergenic 35.0%
TGTTTCTTGTCATGACCATT+TGG + Chr6:17713760-17713779 MsG0680031303.01.T01:intron 35.0%
TTAATTGCATACATGCTTGC+AGG + Chr6:17715955-17715974 MsG0680031303.01.T01:intron 35.0%
TTAGGGATTGTGTACGTTAT+TGG - Chr6:17711819-17711838 None:intergenic 35.0%
TTAGTAAGATCAGCATTCTG+TGG - Chr6:17718188-17718207 None:intergenic 35.0%
TTATAGGATGTTGATGCTGA+GGG + Chr6:17715876-17715895 MsG0680031303.01.T01:intron 35.0%
TTATCAATTGCACCACAAGT+AGG - Chr6:17717279-17717298 None:intergenic 35.0%
TTGTACTAAATAGCGTATCG+CGG - Chr6:17719631-17719650 None:intergenic 35.0%
TTTATAGGATGTTGATGCTG+AGG + Chr6:17715875-17715894 MsG0680031303.01.T01:intron 35.0%
TTTATCAATCAGGACTTGGA+AGG + Chr6:17719983-17720002 MsG0680031303.01.T01:intron 35.0%
TTTGCTCATGGTGTAATGAT+AGG + Chr6:17718717-17718736 MsG0680031303.01.T01:intron 35.0%
! AAAACCAAGTCCAACTTTTG+AGG + Chr6:17716367-17716386 MsG0680031303.01.T01:intron 35.0%
! AAACTTGGATTAGGTGGTTT+AGG + Chr6:17713287-17713306 MsG0680031303.01.T01:intron 35.0%
! ACAGGGAAATCCTTTTGTAT+TGG + Chr6:17719470-17719489 MsG0680031303.01.T01:intron 35.0%
! ATGATCGCTTTGAGTTTAGA+TGG - Chr6:17714570-17714589 None:intergenic 35.0%
! ATTTGTTAATTTGGGGACAG+TGG + Chr6:17713915-17713934 MsG0680031303.01.T01:intron 35.0%
! CAATTTTGTCAAACCTCAAG+TGG - Chr6:17718780-17718799 None:intergenic 35.0%
! TCCTATCTCTTAACCTTTTG+AGG + Chr6:17717341-17717360 MsG0680031303.01.T01:intron 35.0%
! TCTAATGTAGCTTGTGCTTT+AGG + Chr6:17714208-17714227 MsG0680031303.01.T01:intron 35.0%
! TCTGTGGAGTTAAAAAGTAC+CGG - Chr6:17718172-17718191 None:intergenic 35.0%
! TGATCGCTTTGAGTTTAGAT+GGG - Chr6:17714569-17714588 None:intergenic 35.0%
! TTCTAAAGAAAACGACAGAC+AGG - Chr6:17716874-17716893 None:intergenic 35.0%
! TTGTAGAAACTTGGATTAGG+TGG + Chr6:17713281-17713300 MsG0680031303.01.T01:intron 35.0%
!! AAGTGGGTTAGTGTTTAGAA+AGG - Chr6:17718763-17718782 None:intergenic 35.0%
!! AGGGGTATGTTTTTGTTGAT+AGG + Chr6:17713957-17713976 MsG0680031303.01.T01:intron 35.0%
!! AGTGGGTTAGTGTTTAGAAA+GGG - Chr6:17718762-17718781 None:intergenic 35.0%
!! ATTTTCTGAGGGGAAATTTG+TGG + Chr6:17719324-17719343 MsG0680031303.01.T01:intron 35.0%
!! ATTTTGCCTTTAGCCTTTCT+TGG + Chr6:17717071-17717090 MsG0680031303.01.T01:intron 35.0%
!! GGGGTATGTTTTTGTTGATA+GGG + Chr6:17713958-17713977 MsG0680031303.01.T01:intron 35.0%
!!! TCTGTCGTTTTCTTTAGAAG+TGG + Chr6:17716875-17716894 MsG0680031303.01.T01:intron 35.0%
!!! TGACGGTTACCAGTTTTTTT+TGG + Chr6:17712557-17712576 MsG0680031303.01.T01:intron 35.0%
AATATTATGCCGGATGCCAT+AGG - Chr6:17716400-17716419 None:intergenic 40.0%
AATATTGAGAAGTGGGGATG+TGG + Chr6:17720079-17720098 MsG0680031303.01.T01:three_prime_UTR 40.0%
AATGACAAGGAAACATGTGG+AGG - Chr6:17716145-17716164 None:intergenic 40.0%
AATGTAAGGGTGGATGTTAG+TGG - Chr6:17715358-17715377 None:intergenic 40.0%
AATGTATGTTTGCACTGCAG+GGG + Chr6:17713939-17713958 MsG0680031303.01.T01:intron 40.0%
ACATCCCTAAGTATGAAGAC+TGG - Chr6:17715506-17715525 None:intergenic 40.0%
AGAAAGTGACGGTTACCAAA+CGG - Chr6:17712676-17712695 None:intergenic 40.0%
AGAGTTTAATGTGCTGGACA+GGG + Chr6:17713432-17713451 MsG0680031303.01.T01:intron 40.0%
AGATGTCCTTAATCAGAGGA+AGG + Chr6:17714781-17714800 MsG0680031303.01.T01:CDS 40.0%
AGCAGGTGAACATAGTCAAA+AGG - Chr6:17719256-17719275 None:intergenic 40.0%
AGGAAGGTAACCTCAAAAGT+TGG - Chr6:17716380-17716399 None:intergenic 40.0%
ATCAATAATGGCCAGTACTG+TGG + Chr6:17716277-17716296 MsG0680031303.01.T01:intron 40.0%
ATGACATTGTGGACCTCAAA+AGG - Chr6:17717357-17717376 None:intergenic 40.0%
ATGTAAGGGTGGATGTTAGT+GGG - Chr6:17715357-17715376 None:intergenic 40.0%
ATGTGGGAATAAGATAAGCG+TGG + Chr6:17713157-17713176 MsG0680031303.01.T01:intron 40.0%
ATTGCACCACAAGTAGGATT+AGG - Chr6:17717273-17717292 None:intergenic 40.0%
CAACACAAGGAAATAGCATG+TGG + Chr6:17719894-17719913 MsG0680031303.01.T01:intron 40.0%
CACAAGTAGCTGATAGTACT+CGG - Chr6:17714077-17714096 None:intergenic 40.0%
CACATGTATCTGCCCATTAT+TGG - Chr6:17719373-17719392 None:intergenic 40.0%
CAGTACGTGTCAATTCTGTA+CGG - Chr6:17714820-17714839 None:intergenic 40.0%
CATCGGTAAGAAAATTGGGA+TGG - Chr6:17717204-17717223 None:intergenic 40.0%
CATTTCTGAATTTCGCAGGA+GGG + Chr6:17711696-17711715 MsG0680031303.01.T01:intron 40.0%
CCAAACAAACCCTGAATGAA+TGG + Chr6:17713010-17713029 MsG0680031303.01.T01:intron 40.0%
CCATAACATCAATCAATGGC+CGG - Chr6:17720189-17720208 None:intergenic 40.0%
CGCTTATCTTATTCCCACAT+TGG - Chr6:17713157-17713176 None:intergenic 40.0%
CGTTGTAAATATTACCCTGG+CGG + Chr6:17717460-17717479 MsG0680031303.01.T01:intron 40.0%
CTTACTAATGCCAATCTGGA+GGG + Chr6:17718200-17718219 MsG0680031303.01.T01:CDS 40.0%
CTTCTTCCTTCCTCTGATTA+AGG - Chr6:17714790-17714809 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + Chr6:17712431-17712450 MsG0680031303.01.T01:intron 40.0%
GAAATAAGCTTCTCCACCTA+AGG - Chr6:17715236-17715255 None:intergenic 40.0%
GACAAAAATCCACAGAACAC+AGG - Chr6:17717635-17717654 None:intergenic 40.0%
GACAATAGTCTATGTAGGCA+TGG - Chr6:17717898-17717917 None:intergenic 40.0%
GACAGCTTATGCTCTCTATT+TGG - Chr6:17712964-17712983 None:intergenic 40.0%
GAGATTAATGCCTTGCAACA+TGG + Chr6:17718663-17718682 MsG0680031303.01.T01:intron 40.0%
GATTAATGCCTTGCAACATG+GGG + Chr6:17718665-17718684 MsG0680031303.01.T01:intron 40.0%
GATTGTGATATGAGACCTCA+AGG + Chr6:17713826-17713845 MsG0680031303.01.T01:intron 40.0%
GCATTGCATCTGCCAATAAT+GGG + Chr6:17719358-17719377 MsG0680031303.01.T01:intron 40.0%
GCATTTGAAGAATGCACCAA+AGG + Chr6:17715193-17715212 MsG0680031303.01.T01:intron 40.0%
GCATTTGATAGGTTTCGAAC+AGG + Chr6:17714344-17714363 MsG0680031303.01.T01:intron 40.0%
GCTCAAATTTCAAGCAGAAC+AGG - Chr6:17717313-17717332 None:intergenic 40.0%
GTAACCTCAAAAGTTGGACT+TGG - Chr6:17716374-17716393 None:intergenic 40.0%
GTAATGTATGTTTGCACTGC+AGG + Chr6:17713937-17713956 MsG0680031303.01.T01:intron 40.0%
GTATACAATCTGAGAGAGTC+AGG + Chr6:17714852-17714871 MsG0680031303.01.T01:CDS 40.0%
TAATCAGAGGAAGGAAGAAG+AGG + Chr6:17714790-17714809 MsG0680031303.01.T01:CDS 40.0%
TACATCTTGCACAAGGATCA+CGG + Chr6:17714495-17714514 MsG0680031303.01.T01:intron 40.0%
TAGAGTTTAATGTGCTGGAC+AGG + Chr6:17713431-17713450 MsG0680031303.01.T01:intron 40.0%
TATGAATCACAGACACTCCT+CGG - Chr6:17712077-17712096 None:intergenic 40.0%
TCATTTCTGAATTTCGCAGG+AGG + Chr6:17711695-17711714 MsG0680031303.01.T01:intron 40.0%
TCCAAGATGTCCTTAATCAG+AGG + Chr6:17714777-17714796 MsG0680031303.01.T01:CDS 40.0%
TCCAGAATACATCTTGCACA+AGG + Chr6:17714488-17714507 MsG0680031303.01.T01:intron 40.0%
TCCTCTGATTAAGGACATCT+TGG - Chr6:17714781-17714800 None:intergenic 40.0%
TCCTTGTGCAAGATGTATTC+TGG - Chr6:17714492-17714511 None:intergenic 40.0%
TCGAGTATTAGCCCAAAGTA+TGG - Chr6:17713514-17713533 None:intergenic 40.0%
TCGCACATAGGAGAGAAAAA+TGG - Chr6:17716684-17716703 None:intergenic 40.0%
TCTAAACACTAACCCACTTG+AGG + Chr6:17718764-17718783 MsG0680031303.01.T01:intron 40.0%
TCTTACTAATGCCAATCTGG+AGG + Chr6:17718199-17718218 MsG0680031303.01.T01:CDS 40.0%
TCTTCAATGTGCAAAGTTCC+GGG + Chr6:17715465-17715484 MsG0680031303.01.T01:CDS 40.0%
TGCATTGCATCTGCCAATAA+TGG + Chr6:17719357-17719376 MsG0680031303.01.T01:intron 40.0%
TGTCAATTAAATTGGGACGG+AGG - Chr6:17712240-17712259 None:intergenic 40.0%
TGTCGAAAGCAAACTACACA+TGG - Chr6:17713607-17713626 None:intergenic 40.0%
TGTTAAGGACAGGTATCCTT+TGG - Chr6:17715677-17715696 None:intergenic 40.0%
TTAATCTCATCGTTGTGCCA+AGG - Chr6:17718651-17718670 None:intergenic 40.0%
TTAGTAGGTTGTAGCTTCTG+TGG + Chr6:17716534-17716553 MsG0680031303.01.T01:CDS 40.0%
TTGCACCACAAGTAGGATTA+GGG - Chr6:17717272-17717291 None:intergenic 40.0%
TTGCTACGTCCTAAACAAGT+AGG - Chr6:17714451-17714470 None:intergenic 40.0%
TTGGCTAAAAAAGACCCGTT+TGG + Chr6:17712658-17712677 MsG0680031303.01.T01:intron 40.0%
TTGTAAGGAGGAAGCCATTT+AGG + Chr6:17720245-17720264 MsG0680031303.01.T01:intron 40.0%
TTTCGAGGGGTTAATCTTTC+TGG + Chr6:17714875-17714894 MsG0680031303.01.T01:CDS 40.0%
TTTGCGATTGTTGTCAACAC+TGG + Chr6:17719731-17719750 MsG0680031303.01.T01:intron 40.0%
! AAAGGATTTCCCTGTTTTGC+AGG - Chr6:17719465-17719484 None:intergenic 40.0%
! AAATTATTAGCCGTGTCGGT+CGG - Chr6:17711975-17711994 None:intergenic 40.0%
! AAGGATTTCCCTGTTTTGCA+GGG - Chr6:17719464-17719483 None:intergenic 40.0%
! AGCATAAGATGTGTTGGTCT+TGG - Chr6:17718456-17718475 None:intergenic 40.0%
! ATTTTTCTCTCCTATGTGCG+AGG + Chr6:17716683-17716702 MsG0680031303.01.T01:intron 40.0%
! CCATTCATTCAGGGTTTGTT+TGG - Chr6:17713013-17713032 None:intergenic 40.0%
! GATCGCTTTGAGTTTAGATG+GGG - Chr6:17714568-17714587 None:intergenic 40.0%
! GTGGATTGACCACCTTAATT+TGG + Chr6:17717973-17717992 MsG0680031303.01.T01:intron 40.0%
! TTAGTTCTCGGAGACCAAAT+AGG + Chr6:17713723-17713742 MsG0680031303.01.T01:intron 40.0%
!! CACATGCTATTTCCTTGTGT+TGG - Chr6:17719896-17719915 None:intergenic 40.0%
!! CATAAGATGTGTTGGTCTTG+GGG - Chr6:17718454-17718473 None:intergenic 40.0%
!! CTGTGGAGTTAAAAAGTACC+GGG - Chr6:17718171-17718190 None:intergenic 40.0%
!! GCATAAGATGTGTTGGTCTT+GGG - Chr6:17718455-17718474 None:intergenic 40.0%
!!! CTTTTGAGGTTACCTTCCTA+TGG + Chr6:17716381-17716400 MsG0680031303.01.T01:intron 40.0%
AAGGATCACGGTTCTTGTGA+AGG + Chr6:17714507-17714526 MsG0680031303.01.T01:intron 45.0%
AATTGGGATGGCATCAACTG+CGG - Chr6:17717192-17717211 None:intergenic 45.0%
ACAAAGGAAGGAAGGAAGGA+AGG - Chr6:17711506-17711525 None:intergenic 45.0%
ACACTACAATGCCACAGTAC+TGG - Chr6:17716291-17716310 None:intergenic 45.0%
ACAGGCTCGTGAGAAAATGA+CGG + Chr6:17712540-17712559 MsG0680031303.01.T01:intron 45.0%
ACTAGGACATGCATAATCCG+AGG + Chr6:17712057-17712076 MsG0680031303.01.T01:intron 45.0%
AGAAACAGCGTCTTTGCTCA+TGG + Chr6:17718705-17718724 MsG0680031303.01.T01:intron 45.0%
AGCTACTGTGTGACCAAGAA+AGG - Chr6:17717087-17717106 None:intergenic 45.0%
AGCTTTGCACCCTGAGATAT+AGG - Chr6:17719082-17719101 None:intergenic 45.0%
ATAAGAGGACAACAGACACC+AGG - Chr6:17719841-17719860 None:intergenic 45.0%
ATAGATACCATTTGACCGCC+AGG - Chr6:17717478-17717497 None:intergenic 45.0%
ATATTACCCTGGCGGTCAAA+TGG + Chr6:17717468-17717487 MsG0680031303.01.T01:intron 45.0%
ATATTCAGCTTCCTCGAGAG+TGG - Chr6:17714035-17714054 None:intergenic 45.0%
CAACTTCATTGTCCAGCCAA+AGG + Chr6:17715658-17715677 MsG0680031303.01.T01:intron 45.0%
CATCTGAAGGGCCATACTTT+GGG + Chr6:17713500-17713519 MsG0680031303.01.T01:intron 45.0%
CTTGCAATGAAGTCCCGATA+CGG + Chr6:17711933-17711952 MsG0680031303.01.T01:intron 45.0%
CTTTGGCTGGACAATGAAGT+TGG - Chr6:17715660-17715679 None:intergenic 45.0%
GAAAGTGACGGTTACCAAAC+GGG - Chr6:17712675-17712694 None:intergenic 45.0%
GCGAAATCACGTGTATTTCC+TGG + Chr6:17719820-17719839 MsG0680031303.01.T01:intron 45.0%
GCTTTGCACCCTGAGATATA+GGG - Chr6:17719081-17719100 None:intergenic 45.0%
GGAATTCCTTCATCGCACAA+AGG - Chr6:17711522-17711541 None:intergenic 45.0%
GTCATCCCTAATCCTACTTG+TGG + Chr6:17717264-17717283 MsG0680031303.01.T01:intron 45.0%
GTGTCGGATGAATGACATTG+TGG - Chr6:17717368-17717387 None:intergenic 45.0%
GTGTGACCAAGAAAGGCTAA+AGG - Chr6:17717080-17717099 None:intergenic 45.0%
TAGATACCATTTGACCGCCA+GGG - Chr6:17717477-17717496 None:intergenic 45.0%
TATTCAGCTTCCTCGAGAGT+GGG - Chr6:17714034-17714053 None:intergenic 45.0%
TCATCTGAAGGGCCATACTT+TGG + Chr6:17713499-17713518 MsG0680031303.01.T01:intron 45.0%
TCCACAGAACACAGGATTGA+TGG - Chr6:17717627-17717646 None:intergenic 45.0%
TCCATCAATCCTGTGTTCTG+TGG + Chr6:17717623-17717642 MsG0680031303.01.T01:intron 45.0%
TCCTAGTGTCAGACACATGT+CGG - Chr6:17712044-17712063 None:intergenic 45.0%
TCTGATTGCTCCGAGCAAAT+TGG - Chr6:17720026-17720045 None:intergenic 45.0%
TGCTCATGAAGTTGTGCAAC+CGG + Chr6:17720167-17720186 MsG0680031303.01.T01:three_prime_UTR 45.0%
TGTCGTGTCTGTATCCGTAT+CGG - Chr6:17711950-17711969 None:intergenic 45.0%
TTCATCGCACAAAGGAAGGA+AGG - Chr6:17711514-17711533 None:intergenic 45.0%
TTCCTTCATCGCACAAAGGA+AGG - Chr6:17711518-17711537 None:intergenic 45.0%
TTCCTTCCTTTGTGCGATGA+AGG + Chr6:17711513-17711532 MsG0680031303.01.T01:exon 45.0%
TTCTGATGAACCTCGCACAT+AGG - Chr6:17716696-17716715 None:intergenic 45.0%
TTGACTATGTTCACCTGCTG+TGG + Chr6:17719257-17719276 MsG0680031303.01.T01:intron 45.0%
TTGGAAGGAGCAAAGCTTGA+TGG + Chr6:17719998-17720017 MsG0680031303.01.T01:CDS 45.0%
TTTACTGGGGCAAATCTTCG+TGG + Chr6:17716016-17716035 MsG0680031303.01.T01:CDS 45.0%
! ACCCCTTACAGTTGTGCTTT+TGG - Chr6:17713128-17713147 None:intergenic 45.0%
! AGAATGCAGCGTTGAATGTG+TGG + Chr6:17713188-17713207 MsG0680031303.01.T01:intron 45.0%
! CCCAAAAGCACAACTGTAAG+GGG + Chr6:17713124-17713143 MsG0680031303.01.T01:intron 45.0%
! CCCCTTACAGTTGTGCTTTT+GGG - Chr6:17713127-17713146 None:intergenic 45.0%
! CCGGCCATTGATTGATGTTA+TGG + Chr6:17720186-17720205 MsG0680031303.01.T01:three_prime_UTR 45.0%
! GCCCAAAAGCACAACTGTAA+GGG + Chr6:17713123-17713142 MsG0680031303.01.T01:intron 45.0%
! TGCCCAAAAGCACAACTGTA+AGG + Chr6:17713122-17713141 MsG0680031303.01.T01:intron 45.0%
! TTCGTGGTGCTTTATTGGCT+GGG + Chr6:17716032-17716051 MsG0680031303.01.T01:CDS 45.0%
!! ATAGCAGCGAGCATTGAATC+TGG - Chr6:17711764-17711783 None:intergenic 45.0%
!! CTTGATGGTGCCAATTTGCT+CGG + Chr6:17720013-17720032 MsG0680031303.01.T01:CDS 45.0%
!! GAGCAAAGACGCTGTTTCTA+TGG - Chr6:17718704-17718723 None:intergenic 45.0%
!! GAGGAGTGTCTGTGATTCAT+AGG + Chr6:17712076-17712095 MsG0680031303.01.T01:intron 45.0%
!! GCCAAAAACTCGTGCTGTTT+CGG - Chr6:17719531-17719550 None:intergenic 45.0%
!!! CAGCACGAGTTTTTGGCTAT+AGG + Chr6:17719534-17719553 MsG0680031303.01.T01:intron 45.0%
!!! AATTTTTTATTAAAAGATAA+GGG + Chr6:17716250-17716269 MsG0680031303.01.T01:intron 5.0%
AAGGACAGGTATCCTTTGGC+TGG - Chr6:17715673-17715692 None:intergenic 50.0%
ACGAAGCGCGGAAGATAACT+CGG - Chr6:17711548-17711567 None:intergenic 50.0%
AGTTTGCCACCCTGCAAAAC+AGG + Chr6:17719452-17719471 MsG0680031303.01.T01:intron 50.0%
ATGCTCGCTGCTATGTTCAG+TGG + Chr6:17711770-17711789 MsG0680031303.01.T01:CDS 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + Chr6:17712435-17712454 MsG0680031303.01.T01:intron 50.0%
CAATCTGGAGGGAGCTAATC+TGG + Chr6:17718211-17718230 MsG0680031303.01.T01:CDS 50.0%
CAATTGGTTAAGGGACGGTG+TGG + Chr6:17714006-17714025 MsG0680031303.01.T01:CDS 50.0%
CCTAATGAAGGTGGCCAATC+AGG + Chr6:17717754-17717773 MsG0680031303.01.T01:intron 50.0%
CTGAGAGAGTCAGGTTTCGA+GGG + Chr6:17714861-17714880 MsG0680031303.01.T01:CDS 50.0%
GACGGAGGGAGTAAGCTATA+AGG + Chr6:17712453-17712472 MsG0680031303.01.T01:intron 50.0%
GCAAAAATCAGGACCACAGC+AGG - Chr6:17719273-17719292 None:intergenic 50.0%
GGCATCAACTGCGGAAAAGA+TGG - Chr6:17717183-17717202 None:intergenic 50.0%
GGTTACCTTCCTATGGCATC+CGG + Chr6:17716388-17716407 MsG0680031303.01.T01:intron 50.0%
GTCGTGTCTGTATCCGTATC+GGG - Chr6:17711949-17711968 None:intergenic 50.0%
GTTTGCCACCCTGCAAAACA+GGG + Chr6:17719453-17719472 MsG0680031303.01.T01:intron 50.0%
TCCGACATGTGTCTGACACT+AGG + Chr6:17712040-17712059 MsG0680031303.01.T01:intron 50.0%
TCGCACAAAGGAAGGAAGGA+AGG - Chr6:17711510-17711529 None:intergenic 50.0%
TCGCAGGAGGGAAGAAATTC+TGG + Chr6:17711708-17711727 MsG0680031303.01.T01:intron 50.0%
TCTGAGAGAGTCAGGTTTCG+AGG + Chr6:17714860-17714879 MsG0680031303.01.T01:CDS 50.0%
TGACAGACTTTGGGCTCAAG+TGG + Chr6:17713464-17713483 MsG0680031303.01.T01:intron 50.0%
TGAGAGAGTCAGGTTTCGAG+GGG + Chr6:17714862-17714881 MsG0680031303.01.T01:CDS 50.0%
TGGGATCTTGAGAGAGAGTG+TGG - Chr6:17711799-17711818 None:intergenic 50.0%
TTACAACGTTGAGTGGGGCA+AGG - Chr6:17717448-17717467 None:intergenic 50.0%
TTATGCCGGATGCCATAGGA+AGG - Chr6:17716396-17716415 None:intergenic 50.0%
! CAGATTAGCTCCCTCCAGAT+TGG - Chr6:17718213-17718232 None:intergenic 50.0%
! CCTGATTGGCCACCTTCATT+AGG - Chr6:17717757-17717776 None:intergenic 50.0%
! CTTCGTGGTGCTTTATTGGC+TGG + Chr6:17716031-17716050 MsG0680031303.01.T01:CDS 50.0%
! GATTTCCCTGTTTTGCAGGG+TGG - Chr6:17719461-17719480 None:intergenic 50.0%
! GCCGAAACAGCACGAGTTTT+TGG + Chr6:17719527-17719546 MsG0680031303.01.T01:intron 50.0%
!! TGGCATCGACCTCTCTAAAC+TGG + Chr6:17714895-17714914 MsG0680031303.01.T01:CDS 50.0%
AACTGCGACCCCATGTTGCA+AGG - Chr6:17718676-17718695 None:intergenic 55.0%
ACCGATGTTGAGACGAAGCG+CGG - Chr6:17711560-17711579 None:intergenic 55.0%
ATAGCTTACTCCCTCCGTCC+CGG - Chr6:17712452-17712471 None:intergenic 55.0%
CCTGCGATCTGCACATCTAC+AGG + Chr6:17716563-17716582 MsG0680031303.01.T01:CDS 55.0%
CCTGTAGATGTGCAGATCGC+AGG - Chr6:17716566-17716585 None:intergenic 55.0%
CTGGAGGGAGCTAATCTGGA+AGG + Chr6:17718215-17718234 MsG0680031303.01.T01:CDS 55.0%
GACGCAGATAAGCTCGCTGA+AGG - Chr6:17719132-17719151 None:intergenic 55.0%
GCGCGGAAGATAACTCGGAT+TGG - Chr6:17711543-17711562 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG + Chr6:17712439-17712458 MsG0680031303.01.T01:intron 55.0%
TCCGCGCTTCGTCTCAACAT+CGG + Chr6:17711556-17711575 MsG0680031303.01.T01:CDS 55.0%
TGCAGGGTGGCAAACTGTAG+CGG - Chr6:17719448-17719467 None:intergenic 55.0%
ACACGACATGCCGACCGACA+CGG + Chr6:17711962-17711981 MsG0680031303.01.T01:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG + Chr6:17712438-17712457 MsG0680031303.01.T01:intron 60.0%
CGGTGTGGTGCCCACTCTCG+AGG + Chr6:17714021-17714040 MsG0680031303.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 17711463 17720424 17711463 ID=MsG0680031303.01;Name=MsG0680031303.01
Chr6 mRNA 17711463 17720424 17711463 ID=MsG0680031303.01.T01;Parent=MsG0680031303.01;Name=MsG0680031303.01.T01;_AED=0.42;_eAED=0.46;_QI=66|0.75|0.84|1|0.58|0.61|13|352|345
Chr6 exon 17711463 17711577 17711463 ID=MsG0680031303.01.T01:exon:1606;Parent=MsG0680031303.01.T01
Chr6 exon 17711714 17711823 17711714 ID=MsG0680031303.01.T01:exon:1607;Parent=MsG0680031303.01.T01
Chr6 exon 17713959 17714093 17713959 ID=MsG0680031303.01.T01:exon:1608;Parent=MsG0680031303.01.T01
Chr6 exon 17714761 17714976 17714761 ID=MsG0680031303.01.T01:exon:1609;Parent=MsG0680031303.01.T01
Chr6 exon 17715403 17715486 17715403 ID=MsG0680031303.01.T01:exon:1610;Parent=MsG0680031303.01.T01
Chr6 exon 17715882 17715928 17715882 ID=MsG0680031303.01.T01:exon:1611;Parent=MsG0680031303.01.T01
Chr6 exon 17716009 17716082 17716009 ID=MsG0680031303.01.T01:exon:1612;Parent=MsG0680031303.01.T01
Chr6 exon 17716526 17716584 17716526 ID=MsG0680031303.01.T01:exon:1613;Parent=MsG0680031303.01.T01
Chr6 exon 17718191 17718250 17718191 ID=MsG0680031303.01.T01:exon:1614;Parent=MsG0680031303.01.T01
Chr6 exon 17719091 17719171 17719091 ID=MsG0680031303.01.T01:exon:1615;Parent=MsG0680031303.01.T01
Chr6 exon 17719384 17719452 17719384 ID=MsG0680031303.01.T01:exon:1616;Parent=MsG0680031303.01.T01
Chr6 exon 17719995 17720230 17719995 ID=MsG0680031303.01.T01:exon:1617;Parent=MsG0680031303.01.T01
Chr6 exon 17720255 17720424 17720255 ID=MsG0680031303.01.T01:exon:1618;Parent=MsG0680031303.01.T01
Chr6 five_prime_UTR 17711463 17711528 17711463 ID=MsG0680031303.01.T01:five_prime_utr;Parent=MsG0680031303.01.T01
Chr6 CDS 17711529 17711577 17711529 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 CDS 17711714 17711823 17711714 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 CDS 17713959 17714093 17713959 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 CDS 17714761 17714976 17714761 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 CDS 17715403 17715486 17715403 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 CDS 17715882 17715928 17715882 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 CDS 17716009 17716082 17716009 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 CDS 17716526 17716584 17716526 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 CDS 17718191 17718250 17718191 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 CDS 17719091 17719171 17719091 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 CDS 17719384 17719452 17719384 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 CDS 17719995 17720048 17719995 ID=MsG0680031303.01.T01:cds;Parent=MsG0680031303.01.T01
Chr6 three_prime_UTR 17720049 17720230 17720049 ID=MsG0680031303.01.T01:three_prime_utr;Parent=MsG0680031303.01.T01
Chr6 three_prime_UTR 17720255 17720424 17720255 ID=MsG0680031303.01.T01:three_prime_utr;Parent=MsG0680031303.01.T01
Gene Sequence

>MsG0680031303.01.T01

ATGAAGGAATTCCAATCCGAGTTATCTTCCGCGCTTCGTCTCAACATCGGAGGGAAGAAATTCTGGACAACGATCGATACAGTTACTCAACGTGAACCAGATTCAATGCTCGCTGCTATGTTCAGTGGTCGCCACACTCTCTCTCAAGATCCCAATAACGGGTATGTTTTTGTTGATAGGGATGGTAAACACTTCAGACACATTCTCAATTGGTTAAGGGACGGTGTGGTGCCCACTCTCGAGGAAGCTGAATATACAGAGCTGTTAAGGGAAGCCGAGTACTATCAGCTACTTGGGCTTATAGATGGAATCCAAGATGTCCTTAATCAGAGGAAGGAAGAAGAGGAGCTCCGTACAGAATTGACACGTACTGATATCATCAAATGTATACAATCTGAGAGAGTCAGGTTTCGAGGGGTTAATCTTTCTGGCATCGACCTCTCTAAACTGGTAGATTCTTGGACCATTTATTATATAAAATGTATGTATCTGTTTACTTGTAAAACAAAGGATTTATCATTTGTGGATTTCAGCTATGCTTGTCTTAAAAATGTGTTCTTTTCACGAGCAAATCTTCAATGTGCAAAGTTCCGGGATGTTGATGCTGAGGGCTCCATCTTTCATAATGCAACTTTGCGTGAATGTGAATTTACTGGGGCAAATCTTCGTGGTGCTTTATTGGCTGGGACAAATCTTCAAAGTGCAAATCTACAAGATGCTTGTTTAGTAGGTTGTAGCTTCTGTGGAGCAGACCTGCGATCTGCACATCTACAGAATGCTGATCTTACTAATGCCAATCTGGAGGGAGCTAATCTGGAAGGAGCTAATTTAAAGGGTGCAAAGCTGAACAGTGCCAAGTTGAAGAATGCTAACCTTCAGCGAGCTTATCTGCGTCATGTCAATCTTCGAGATACAATACATGTGCAGTTTGCGACAATTGATTTTGAAAATGTAGTTTTAAACAAGTTGAACACAACCGCTACAGACTTGGAAGGAGCAAAGCTTGATGGTGCCAATTTGCTCGGAGCAATCAGATAA
Protein sequence

>MsG0680031303.01.T01

MKEFQSELSSALRLNIGGKKFWTTIDTVTQREPDSMLAAMFSGRHTLSQDPNNGYVFVDRDGKHFRHILNWLRDGVVPTLEEAEYTELLREAEYYQLLGLIDGIQDVLNQRKEEEELRTELTRTDIIKCIQSERVRFRGVNLSGIDLSKLVDSWTIYYIKCMYLFTCKTKDLSFVDFSYACLKNVFFSRANLQCAKFRDVDAEGSIFHNATLRECEFTGANLRGALLAGTNLQSANLQDACLVGCSFCGADLRSAHLQNADLTNANLEGANLEGANLKGAKLNSAKLKNANLQRAYLRHVNLRDTIHVQFATIDFENVVLNKLNTTATDLEGAKLDGANLLGAIR*