Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032064.01.T01 | XP_003619060.1 | 89.773 | 264 | 3 | 1 | 1 | 240 | 1 | 264 | 4.94E-165 | 471 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032064.01.T01 | Q6NMB7 | 49.804 | 255 | 97 | 4 | 11 | 240 | 1 | 249 | 4.52E-68 | 216 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032064.01.T01 | G7KHQ6 | 89.773 | 264 | 3 | 1 | 1 | 240 | 1 | 264 | 2.36e-165 | 471 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0480019279.01 | MsG0680032064.01 | 0.807836 | 4.159771e-50 | 2.341067e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032064.01.T01 | MTR_6g036450 | 89.773 | 264 | 3 | 1 | 1 | 240 | 1 | 264 | 5.98e-169 | 471 |
MsG0680032064.01.T01 | MTR_8g092650 | 41.154 | 260 | 119 | 4 | 12 | 240 | 1 | 257 | 3.29e-55 | 181 |
MsG0680032064.01.T01 | MTR_3g095460 | 40.154 | 259 | 120 | 4 | 12 | 240 | 1 | 254 | 7.96e-55 | 180 |
MsG0680032064.01.T01 | MTR_1g068630 | 39.370 | 254 | 123 | 5 | 12 | 239 | 11 | 259 | 1.99e-49 | 166 |
MsG0680032064.01.T01 | MTR_3g095450 | 38.132 | 257 | 121 | 6 | 17 | 240 | 6 | 257 | 4.78e-49 | 165 |
MsG0680032064.01.T01 | MTR_3g095440 | 38.372 | 258 | 121 | 6 | 17 | 241 | 6 | 258 | 1.72e-48 | 161 |
MsG0680032064.01.T01 | MTR_3g095420 | 37.500 | 256 | 124 | 6 | 17 | 240 | 8 | 259 | 2.51e-48 | 164 |
MsG0680032064.01.T01 | MTR_3g095440 | 38.132 | 257 | 121 | 6 | 17 | 240 | 6 | 257 | 2.23e-46 | 158 |
MsG0680032064.01.T01 | MTR_3g012420 | 33.969 | 262 | 137 | 6 | 8 | 239 | 9 | 264 | 1.53e-41 | 147 |
MsG0680032064.01.T01 | MTR_7g100050 | 35.039 | 254 | 128 | 5 | 16 | 239 | 13 | 259 | 1.66e-41 | 146 |
MsG0680032064.01.T01 | MTR_1g030580 | 32.806 | 253 | 142 | 3 | 12 | 239 | 12 | 261 | 3.32e-41 | 145 |
MsG0680032064.01.T01 | MTR_1g023180 | 35.271 | 258 | 125 | 5 | 10 | 226 | 15 | 271 | 3.66e-41 | 145 |
MsG0680032064.01.T01 | MTR_3g072500 | 31.250 | 256 | 150 | 3 | 11 | 241 | 15 | 269 | 1.84e-40 | 141 |
MsG0680032064.01.T01 | MTR_2g007990 | 34.470 | 264 | 145 | 4 | 1 | 239 | 3 | 263 | 5.22e-40 | 142 |
MsG0680032064.01.T01 | MTR_1g051120 | 31.786 | 280 | 160 | 5 | 1 | 253 | 1 | 276 | 2.37e-39 | 140 |
MsG0680032064.01.T01 | MTR_8g041390 | 31.128 | 257 | 146 | 5 | 13 | 240 | 10 | 264 | 4.14e-39 | 140 |
MsG0680032064.01.T01 | MTR_5g021160 | 32.941 | 255 | 143 | 5 | 13 | 241 | 4 | 256 | 6.01e-39 | 137 |
MsG0680032064.01.T01 | MTR_3g112480 | 37.302 | 252 | 123 | 4 | 10 | 226 | 14 | 265 | 6.38e-39 | 140 |
MsG0680032064.01.T01 | MTR_3g072500 | 31.102 | 254 | 149 | 3 | 11 | 239 | 15 | 267 | 8.47e-39 | 139 |
MsG0680032064.01.T01 | MTR_1g074160 | 34.241 | 257 | 138 | 5 | 12 | 242 | 9 | 260 | 1.48e-38 | 135 |
MsG0680032064.01.T01 | MTR_1g074120 | 32.342 | 269 | 143 | 6 | 1 | 239 | 1 | 260 | 2.53e-38 | 137 |
MsG0680032064.01.T01 | MTR_1g073990 | 33.585 | 265 | 140 | 7 | 1 | 236 | 1 | 258 | 3.19e-38 | 137 |
MsG0680032064.01.T01 | MTR_1g074070 | 34.981 | 263 | 136 | 6 | 3 | 239 | 7 | 260 | 4.59e-38 | 136 |
MsG0680032064.01.T01 | MTR_5g021160 | 33.471 | 242 | 133 | 5 | 13 | 228 | 4 | 243 | 1.42e-37 | 135 |
MsG0680032064.01.T01 | MTR_1g074160 | 34.252 | 254 | 136 | 5 | 12 | 239 | 9 | 257 | 6.13e-37 | 133 |
MsG0680032064.01.T01 | MTR_1g030600 | 31.228 | 285 | 160 | 6 | 6 | 255 | 1 | 284 | 1.14e-36 | 134 |
MsG0680032064.01.T01 | MTR_2g007260 | 31.518 | 257 | 147 | 3 | 12 | 239 | 10 | 266 | 2.41e-35 | 130 |
MsG0680032064.01.T01 | MTR_3g072560 | 30.924 | 249 | 142 | 3 | 16 | 239 | 18 | 261 | 1.73e-34 | 128 |
MsG0680032064.01.T01 | MTR_3g072530 | 29.119 | 261 | 155 | 5 | 6 | 239 | 4 | 261 | 2.19e-34 | 127 |
MsG0680032064.01.T01 | MTR_1g074020 | 31.496 | 254 | 143 | 5 | 12 | 239 | 9 | 257 | 1.19e-33 | 125 |
MsG0680032064.01.T01 | MTR_4g094352 | 33.080 | 263 | 146 | 4 | 7 | 239 | 3 | 265 | 4.05e-33 | 124 |
MsG0680032064.01.T01 | MTR_2g007960 | 33.071 | 254 | 140 | 4 | 16 | 239 | 12 | 265 | 4.92e-33 | 124 |
MsG0680032064.01.T01 | MTR_7g111830 | 29.572 | 257 | 142 | 5 | 17 | 239 | 8 | 259 | 1.41e-32 | 122 |
MsG0680032064.01.T01 | MTR_0096s0100 | 31.970 | 269 | 146 | 6 | 15 | 257 | 17 | 274 | 1.48e-32 | 122 |
MsG0680032064.01.T01 | MTR_1g070175 | 30.483 | 269 | 153 | 6 | 11 | 253 | 11 | 271 | 1.54e-32 | 122 |
MsG0680032064.01.T01 | MTR_3g072520 | 31.765 | 255 | 145 | 5 | 12 | 239 | 5 | 257 | 2.66e-31 | 119 |
MsG0680032064.01.T01 | MTR_4g106720 | 30.337 | 267 | 146 | 7 | 1 | 239 | 3 | 257 | 3.12e-31 | 118 |
MsG0680032064.01.T01 | MTR_4g129650 | 31.200 | 250 | 135 | 4 | 9 | 228 | 1 | 243 | 4.99e-31 | 118 |
MsG0680032064.01.T01 | MTR_6g081840 | 31.474 | 251 | 146 | 3 | 25 | 249 | 19 | 269 | 2.64e-30 | 116 |
MsG0680032064.01.T01 | MTR_8g092650 | 39.227 | 181 | 77 | 3 | 90 | 240 | 2 | 179 | 1.09e-29 | 112 |
MsG0680032064.01.T01 | MTR_3g072530 | 26.246 | 301 | 158 | 7 | 6 | 245 | 4 | 301 | 1.70e-29 | 113 |
MsG0680032064.01.T01 | MTR_8g006010 | 32.787 | 244 | 132 | 5 | 12 | 228 | 6 | 244 | 5.77e-29 | 113 |
MsG0680032064.01.T01 | MTR_2g065550 | 29.508 | 244 | 141 | 4 | 12 | 228 | 6 | 245 | 6.89e-29 | 112 |
MsG0680032064.01.T01 | MTR_2g027030 | 30.233 | 258 | 146 | 5 | 11 | 239 | 7 | 259 | 8.75e-29 | 112 |
MsG0680032064.01.T01 | MTR_2g016710 | 28.571 | 252 | 150 | 4 | 13 | 239 | 5 | 251 | 1.36e-28 | 110 |
MsG0680032064.01.T01 | MTR_2g016710 | 28.516 | 256 | 153 | 4 | 9 | 239 | 1 | 251 | 1.41e-28 | 111 |
MsG0680032064.01.T01 | MTR_8g006120 | 30.800 | 250 | 141 | 6 | 6 | 228 | 1 | 245 | 2.32e-28 | 111 |
MsG0680032064.01.T01 | MTR_1g051120 | 30.986 | 213 | 117 | 4 | 1 | 187 | 1 | 209 | 9.79e-28 | 106 |
MsG0680032064.01.T01 | MTR_3g019050 | 27.236 | 246 | 152 | 3 | 19 | 239 | 21 | 264 | 1.24e-27 | 109 |
MsG0680032064.01.T01 | MTR_1g038560 | 30.040 | 253 | 140 | 5 | 16 | 239 | 3 | 247 | 1.56e-27 | 108 |
MsG0680032064.01.T01 | MTR_2g102340 | 28.727 | 275 | 166 | 4 | 3 | 251 | 25 | 295 | 1.74e-27 | 108 |
MsG0680032064.01.T01 | MTR_1g114210 | 28.740 | 254 | 148 | 5 | 13 | 239 | 8 | 255 | 2.39e-27 | 108 |
MsG0680032064.01.T01 | MTR_2g007970 | 31.325 | 249 | 145 | 3 | 16 | 239 | 12 | 259 | 2.57e-27 | 108 |
MsG0680032064.01.T01 | MTR_4g094342 | 29.572 | 257 | 150 | 5 | 12 | 239 | 9 | 263 | 3.75e-27 | 107 |
MsG0680032064.01.T01 | MTR_8g006090 | 28.731 | 268 | 160 | 4 | 12 | 252 | 7 | 270 | 4.76e-27 | 106 |
MsG0680032064.01.T01 | MTR_1g051120 | 30.556 | 216 | 120 | 4 | 1 | 190 | 1 | 212 | 6.82e-27 | 105 |
MsG0680032064.01.T01 | MTR_5g089390 | 27.615 | 239 | 152 | 4 | 20 | 239 | 18 | 254 | 5.71e-26 | 104 |
MsG0680032064.01.T01 | MTR_8g006090 | 29.098 | 244 | 142 | 4 | 12 | 228 | 7 | 246 | 7.32e-26 | 103 |
MsG0680032064.01.T01 | MTR_8g006090 | 29.098 | 244 | 142 | 4 | 12 | 228 | 7 | 246 | 1.68e-25 | 103 |
MsG0680032064.01.T01 | MTR_5g034970 | 32.558 | 258 | 139 | 6 | 20 | 247 | 11 | 263 | 2.58e-25 | 102 |
MsG0680032064.01.T01 | MTR_1g030400 | 28.205 | 234 | 136 | 5 | 25 | 228 | 16 | 247 | 3.07e-25 | 102 |
MsG0680032064.01.T01 | MTR_2g102340 | 29.134 | 254 | 150 | 4 | 12 | 239 | 8 | 257 | 3.45e-25 | 102 |
MsG0680032064.01.T01 | MTR_4g094362 | 28.968 | 252 | 153 | 3 | 12 | 238 | 10 | 260 | 4.84e-25 | 102 |
MsG0680032064.01.T01 | MTR_4g094360 | 27.413 | 259 | 149 | 4 | 12 | 238 | 10 | 261 | 2.81e-24 | 99.4 |
MsG0680032064.01.T01 | MTR_3g072500 | 29.208 | 202 | 117 | 3 | 11 | 187 | 15 | 215 | 5.44e-24 | 96.7 |
MsG0680032064.01.T01 | MTR_4g094360 | 27.413 | 259 | 149 | 4 | 12 | 238 | 10 | 261 | 8.37e-24 | 99.4 |
MsG0680032064.01.T01 | MTR_3g090550 | 29.921 | 254 | 135 | 6 | 17 | 239 | 7 | 248 | 4.73e-23 | 96.7 |
MsG0680032064.01.T01 | MTR_5g034910 | 30.451 | 266 | 152 | 7 | 11 | 247 | 2 | 263 | 1.88e-22 | 94.7 |
MsG0680032064.01.T01 | MTR_4g094340 | 29.730 | 259 | 140 | 7 | 16 | 241 | 9 | 258 | 2.73e-22 | 93.2 |
MsG0680032064.01.T01 | MTR_4g094340 | 29.730 | 259 | 140 | 7 | 16 | 241 | 27 | 276 | 3.01e-22 | 93.2 |
MsG0680032064.01.T01 | MTR_0103s0090 | 30.522 | 249 | 138 | 6 | 17 | 237 | 12 | 253 | 3.74e-22 | 94.4 |
MsG0680032064.01.T01 | MTR_8g006050 | 26.939 | 245 | 131 | 5 | 12 | 228 | 7 | 231 | 5.21e-22 | 93.6 |
MsG0680032064.01.T01 | MTR_5g068790 | 25.296 | 253 | 162 | 4 | 13 | 239 | 15 | 266 | 7.34e-22 | 93.6 |
MsG0680032064.01.T01 | MTR_6g007743 | 31.915 | 235 | 125 | 6 | 31 | 237 | 25 | 252 | 1.03e-21 | 93.2 |
MsG0680032064.01.T01 | MTR_5g034980 | 30.078 | 256 | 146 | 6 | 21 | 247 | 12 | 263 | 1.33e-21 | 92.4 |
MsG0680032064.01.T01 | MTR_5g034990 | 29.762 | 252 | 145 | 5 | 13 | 239 | 11 | 255 | 1.63e-21 | 92.4 |
MsG0680032064.01.T01 | MTR_3g112480 | 33.333 | 192 | 94 | 3 | 69 | 226 | 19 | 210 | 1.78e-21 | 92.0 |
MsG0680032064.01.T01 | MTR_5g069040 | 26.172 | 256 | 158 | 4 | 13 | 239 | 15 | 268 | 2.18e-21 | 92.4 |
MsG0680032064.01.T01 | MTR_5g034980 | 29.960 | 247 | 143 | 5 | 21 | 241 | 12 | 254 | 2.27e-21 | 91.3 |
MsG0680032064.01.T01 | MTR_3g072500 | 32.121 | 165 | 87 | 2 | 99 | 239 | 1 | 164 | 2.30e-21 | 90.9 |
MsG0680032064.01.T01 | MTR_4g094340 | 29.572 | 257 | 139 | 7 | 16 | 239 | 27 | 274 | 3.56e-21 | 91.7 |
MsG0680032064.01.T01 | MTR_4g094340 | 29.572 | 257 | 139 | 7 | 16 | 239 | 9 | 256 | 4.36e-21 | 91.3 |
MsG0680032064.01.T01 | MTR_5g034930 | 29.555 | 247 | 140 | 6 | 21 | 239 | 11 | 251 | 1.29e-20 | 89.7 |
MsG0680032064.01.T01 | MTR_5g025340 | 26.792 | 265 | 156 | 7 | 13 | 240 | 7 | 270 | 9.79e-20 | 87.8 |
MsG0680032064.01.T01 | MTR_5g025400 | 27.737 | 274 | 155 | 9 | 6 | 240 | 4 | 273 | 1.14e-19 | 87.4 |
MsG0680032064.01.T01 | MTR_6g007740 | 29.555 | 247 | 141 | 5 | 17 | 237 | 13 | 252 | 1.52e-19 | 87.8 |
MsG0680032064.01.T01 | MTR_6g007750 | 32.773 | 238 | 122 | 7 | 31 | 237 | 25 | 255 | 1.61e-19 | 87.0 |
MsG0680032064.01.T01 | MTR_6g007757 | 29.600 | 250 | 140 | 6 | 30 | 250 | 24 | 266 | 3.43e-19 | 84.7 |
MsG0680032064.01.T01 | MTR_5g025370 | 27.341 | 267 | 154 | 8 | 13 | 240 | 7 | 272 | 4.24e-19 | 85.9 |
MsG0680032064.01.T01 | MTR_5g025330 | 26.820 | 261 | 153 | 7 | 16 | 239 | 9 | 268 | 2.67e-18 | 84.3 |
MsG0680032064.01.T01 | MTR_6g007747 | 30.901 | 233 | 128 | 5 | 31 | 237 | 25 | 250 | 5.69e-18 | 82.4 |
MsG0680032064.01.T01 | MTR_6g007760 | 28.226 | 248 | 146 | 5 | 17 | 237 | 12 | 254 | 8.52e-18 | 81.6 |
MsG0680032064.01.T01 | MTR_5g021160 | 30.000 | 160 | 85 | 4 | 94 | 228 | 3 | 160 | 1.66e-17 | 80.1 |
MsG0680032064.01.T01 | MTR_6g007757 | 30.085 | 236 | 129 | 6 | 31 | 237 | 25 | 253 | 1.47e-16 | 78.6 |
MsG0680032064.01.T01 | MTR_1g014510 | 28.000 | 250 | 147 | 6 | 17 | 237 | 12 | 257 | 2.22e-16 | 78.6 |
MsG0680032064.01.T01 | MTR_5g025290 | 25.296 | 253 | 152 | 5 | 13 | 228 | 8 | 260 | 3.71e-16 | 77.4 |
MsG0680032064.01.T01 | MTR_4g094342 | 29.717 | 212 | 118 | 5 | 12 | 194 | 9 | 218 | 3.76e-16 | 76.3 |
MsG0680032064.01.T01 | MTR_5g025290 | 25.296 | 253 | 152 | 5 | 13 | 228 | 36 | 288 | 3.79e-16 | 77.8 |
MsG0680032064.01.T01 | MTR_3g093450 | 33.628 | 113 | 53 | 1 | 129 | 241 | 30 | 120 | 2.52e-15 | 72.8 |
MsG0680032064.01.T01 | MTR_4g094340 | 29.310 | 174 | 91 | 3 | 94 | 239 | 21 | 190 | 1.67e-13 | 68.9 |
MsG0680032064.01.T01 | MTR_8g072350 | 24.576 | 236 | 129 | 6 | 16 | 208 | 9 | 238 | 6.45e-13 | 68.2 |
MsG0680032064.01.T01 | MTR_6g007753 | 29.897 | 194 | 105 | 4 | 68 | 237 | 350 | 536 | 8.81e-12 | 65.1 |
MsG0680032064.01.T01 | MTR_4g094340 | 28.780 | 205 | 104 | 7 | 16 | 187 | 27 | 222 | 2.45e-11 | 62.0 |
MsG0680032064.01.T01 | MTR_4g094360 | 26.437 | 174 | 90 | 3 | 96 | 238 | 48 | 214 | 2.59e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680032064.01.T01 | AT1G43650 | 50.195 | 257 | 97 | 4 | 11 | 242 | 1 | 251 | 5.41e-72 | 221 |
MsG0680032064.01.T01 | AT1G43650 | 49.804 | 255 | 97 | 4 | 11 | 240 | 1 | 249 | 4.61e-69 | 216 |
MsG0680032064.01.T01 | AT5G64700 | 39.695 | 262 | 127 | 5 | 12 | 243 | 3 | 263 | 2.15e-50 | 166 |
MsG0680032064.01.T01 | AT5G64700 | 39.768 | 259 | 125 | 5 | 12 | 240 | 3 | 260 | 1.09e-48 | 164 |
MsG0680032064.01.T01 | AT2G37460 | 37.008 | 254 | 129 | 6 | 12 | 239 | 10 | 258 | 9.16e-48 | 162 |
MsG0680032064.01.T01 | AT5G07050 | 33.206 | 262 | 145 | 4 | 8 | 239 | 9 | 270 | 1.98e-45 | 157 |
MsG0680032064.01.T01 | AT3G56620 | 34.127 | 252 | 134 | 4 | 13 | 239 | 7 | 251 | 3.59e-43 | 150 |
MsG0680032064.01.T01 | AT1G21890 | 32.692 | 260 | 144 | 3 | 11 | 239 | 5 | 264 | 3.62e-43 | 150 |
MsG0680032064.01.T01 | AT1G21890 | 33.333 | 255 | 139 | 3 | 16 | 239 | 10 | 264 | 7.70e-43 | 150 |
MsG0680032064.01.T01 | AT2G40900 | 33.730 | 252 | 134 | 3 | 13 | 239 | 7 | 250 | 9.55e-43 | 150 |
MsG0680032064.01.T01 | AT2G39510 | 35.433 | 254 | 135 | 5 | 12 | 239 | 3 | 253 | 7.60e-42 | 147 |
MsG0680032064.01.T01 | AT5G13670 | 32.677 | 254 | 143 | 5 | 13 | 239 | 4 | 256 | 1.45e-40 | 144 |
MsG0680032064.01.T01 | AT4G08290 | 30.651 | 261 | 155 | 3 | 7 | 242 | 3 | 262 | 1.35e-39 | 139 |
MsG0680032064.01.T01 | AT1G75500 | 34.661 | 251 | 133 | 5 | 13 | 232 | 16 | 266 | 6.67e-37 | 134 |
MsG0680032064.01.T01 | AT1G75500 | 34.661 | 251 | 133 | 5 | 13 | 232 | 16 | 266 | 6.67e-37 | 134 |
MsG0680032064.01.T01 | AT4G08290 | 30.233 | 258 | 154 | 3 | 7 | 239 | 3 | 259 | 8.26e-37 | 134 |
MsG0680032064.01.T01 | AT2G37450 | 33.074 | 257 | 120 | 7 | 9 | 239 | 1 | 231 | 1.40e-36 | 132 |
MsG0680032064.01.T01 | AT4G08300 | 30.709 | 254 | 149 | 4 | 12 | 239 | 6 | 258 | 4.13e-36 | 132 |
MsG0680032064.01.T01 | AT3G18200 | 33.600 | 250 | 128 | 6 | 6 | 226 | 24 | 264 | 4.59e-36 | 132 |
MsG0680032064.01.T01 | AT1G44800 | 29.779 | 272 | 159 | 6 | 12 | 255 | 6 | 273 | 1.04e-35 | 130 |
MsG0680032064.01.T01 | AT4G30420 | 32.422 | 256 | 126 | 5 | 9 | 228 | 1 | 245 | 3.27e-34 | 127 |
MsG0680032064.01.T01 | AT1G09380 | 29.762 | 252 | 145 | 5 | 17 | 239 | 8 | 256 | 3.16e-32 | 121 |
MsG0680032064.01.T01 | AT3G53210 | 30.116 | 259 | 148 | 4 | 11 | 241 | 4 | 257 | 1.05e-31 | 117 |
MsG0680032064.01.T01 | AT4G30420 | 32.114 | 246 | 120 | 5 | 19 | 228 | 1 | 235 | 1.27e-30 | 117 |
MsG0680032064.01.T01 | AT3G53210 | 30.488 | 246 | 138 | 4 | 11 | 228 | 4 | 244 | 1.88e-30 | 117 |
MsG0680032064.01.T01 | AT3G30340 | 29.008 | 262 | 140 | 6 | 16 | 241 | 7 | 258 | 1.61e-28 | 110 |
MsG0680032064.01.T01 | AT2G37450 | 31.330 | 233 | 117 | 7 | 9 | 239 | 1 | 192 | 1.95e-27 | 107 |
MsG0680032064.01.T01 | AT3G30340 | 28.846 | 260 | 139 | 6 | 16 | 239 | 7 | 256 | 2.54e-27 | 108 |
MsG0680032064.01.T01 | AT4G28040 | 28.077 | 260 | 142 | 6 | 12 | 243 | 3 | 245 | 4.29e-24 | 99.8 |
MsG0680032064.01.T01 | AT4G28040 | 28.077 | 260 | 142 | 6 | 12 | 243 | 3 | 245 | 4.29e-24 | 99.8 |
MsG0680032064.01.T01 | AT4G28040 | 28.077 | 260 | 142 | 6 | 12 | 243 | 3 | 245 | 4.29e-24 | 99.8 |
MsG0680032064.01.T01 | AT4G28040 | 28.077 | 260 | 142 | 6 | 12 | 243 | 3 | 245 | 4.29e-24 | 99.8 |
MsG0680032064.01.T01 | AT4G28040 | 28.077 | 260 | 142 | 6 | 12 | 243 | 3 | 245 | 4.29e-24 | 99.8 |
MsG0680032064.01.T01 | AT4G01440 | 26.255 | 259 | 159 | 5 | 14 | 245 | 7 | 260 | 7.55e-24 | 97.4 |
MsG0680032064.01.T01 | AT4G01440 | 26.087 | 253 | 155 | 5 | 14 | 239 | 7 | 254 | 6.00e-23 | 95.9 |
MsG0680032064.01.T01 | AT1G25270 | 29.880 | 251 | 146 | 4 | 16 | 239 | 2 | 249 | 7.26e-23 | 96.3 |
MsG0680032064.01.T01 | AT1G68170 | 27.099 | 262 | 166 | 2 | 13 | 249 | 9 | 270 | 7.89e-23 | 96.3 |
MsG0680032064.01.T01 | AT4G01440 | 26.087 | 253 | 155 | 5 | 14 | 239 | 7 | 254 | 1.12e-22 | 95.9 |
MsG0680032064.01.T01 | AT1G68170 | 27.413 | 259 | 163 | 2 | 16 | 249 | 2 | 260 | 1.24e-22 | 95.5 |
MsG0680032064.01.T01 | AT2G37450 | 33.537 | 164 | 79 | 5 | 101 | 239 | 1 | 159 | 2.60e-20 | 87.8 |
MsG0680032064.01.T01 | AT1G01070 | 25.292 | 257 | 160 | 5 | 11 | 239 | 10 | 262 | 3.71e-19 | 85.9 |
MsG0680032064.01.T01 | AT1G11460 | 25.000 | 280 | 166 | 4 | 13 | 251 | 12 | 288 | 7.44e-19 | 84.7 |
MsG0680032064.01.T01 | AT4G01450 | 26.400 | 250 | 158 | 5 | 14 | 241 | 7 | 252 | 8.21e-19 | 83.6 |
MsG0680032064.01.T01 | AT1G70260 | 26.642 | 274 | 163 | 7 | 17 | 255 | 12 | 282 | 1.55e-18 | 84.3 |
MsG0680032064.01.T01 | AT1G11450 | 26.446 | 242 | 148 | 3 | 11 | 226 | 10 | 247 | 1.60e-18 | 83.6 |
MsG0680032064.01.T01 | AT1G11450 | 26.446 | 242 | 148 | 3 | 11 | 226 | 10 | 247 | 3.08e-18 | 83.2 |
MsG0680032064.01.T01 | AT4G01450 | 26.423 | 246 | 155 | 5 | 14 | 237 | 7 | 248 | 3.54e-18 | 83.2 |
MsG0680032064.01.T01 | AT4G01450 | 26.316 | 247 | 156 | 5 | 14 | 238 | 7 | 249 | 3.65e-18 | 83.2 |
MsG0680032064.01.T01 | AT4G01430 | 25.490 | 255 | 160 | 5 | 13 | 239 | 5 | 257 | 3.02e-17 | 80.1 |
MsG0680032064.01.T01 | AT3G28100 | 29.528 | 254 | 142 | 6 | 20 | 242 | 17 | 264 | 6.42e-17 | 78.6 |
MsG0680032064.01.T01 | AT4G01430 | 25.490 | 255 | 160 | 5 | 13 | 239 | 5 | 257 | 8.12e-17 | 79.3 |
MsG0680032064.01.T01 | AT5G40210 | 28.163 | 245 | 129 | 6 | 20 | 237 | 16 | 240 | 1.99e-16 | 78.2 |
MsG0680032064.01.T01 | AT3G45870 | 26.800 | 250 | 148 | 5 | 13 | 228 | 8 | 256 | 2.22e-15 | 74.3 |
MsG0680032064.01.T01 | AT1G60050 | 24.903 | 257 | 159 | 5 | 13 | 235 | 9 | 265 | 3.09e-15 | 74.7 |
MsG0680032064.01.T01 | AT3G28100 | 29.317 | 249 | 139 | 6 | 20 | 237 | 17 | 259 | 3.10e-15 | 74.7 |
MsG0680032064.01.T01 | AT3G28130 | 29.572 | 257 | 138 | 8 | 20 | 242 | 16 | 263 | 4.54e-15 | 73.2 |
MsG0680032064.01.T01 | AT4G01450 | 27.189 | 217 | 132 | 5 | 14 | 208 | 7 | 219 | 4.62e-15 | 72.8 |
MsG0680032064.01.T01 | AT5G45370 | 25.506 | 247 | 147 | 4 | 7 | 228 | 10 | 244 | 4.75e-15 | 74.3 |
MsG0680032064.01.T01 | AT3G45870 | 26.800 | 250 | 148 | 5 | 13 | 228 | 8 | 256 | 6.36e-15 | 73.6 |
MsG0680032064.01.T01 | AT1G11450 | 27.228 | 202 | 117 | 3 | 51 | 226 | 6 | 203 | 8.62e-15 | 73.2 |
MsG0680032064.01.T01 | AT3G45870 | 26.800 | 250 | 148 | 5 | 13 | 228 | 8 | 256 | 9.72e-15 | 73.6 |
MsG0680032064.01.T01 | AT3G28050 | 28.287 | 251 | 139 | 7 | 17 | 237 | 12 | 251 | 1.84e-14 | 72.4 |
MsG0680032064.01.T01 | AT5G45370 | 24.242 | 264 | 153 | 4 | 7 | 228 | 10 | 268 | 2.17e-14 | 72.4 |
MsG0680032064.01.T01 | AT5G45370 | 24.242 | 264 | 153 | 4 | 7 | 228 | 10 | 268 | 2.17e-14 | 72.4 |
MsG0680032064.01.T01 | AT5G40240 | 28.462 | 260 | 137 | 6 | 17 | 239 | 20 | 267 | 6.09e-14 | 71.2 |
MsG0680032064.01.T01 | AT5G40240 | 28.462 | 260 | 137 | 6 | 17 | 239 | 20 | 267 | 6.09e-14 | 71.2 |
MsG0680032064.01.T01 | AT5G40240 | 28.462 | 260 | 137 | 6 | 17 | 239 | 34 | 281 | 6.38e-14 | 71.2 |
MsG0680032064.01.T01 | AT3G53210 | 25.904 | 166 | 91 | 3 | 90 | 228 | 27 | 187 | 9.61e-14 | 70.1 |
MsG0680032064.01.T01 | AT4G15540 | 29.719 | 249 | 135 | 6 | 17 | 239 | 17 | 251 | 1.23e-13 | 70.1 |
MsG0680032064.01.T01 | AT4G15540 | 29.719 | 249 | 135 | 6 | 17 | 239 | 17 | 251 | 1.23e-13 | 70.1 |
MsG0680032064.01.T01 | AT3G28130 | 29.365 | 252 | 135 | 8 | 20 | 237 | 16 | 258 | 1.94e-13 | 69.7 |
MsG0680032064.01.T01 | AT1G11450 | 26.904 | 197 | 114 | 3 | 56 | 226 | 4 | 196 | 2.74e-13 | 68.6 |
MsG0680032064.01.T01 | AT4G19185 | 24.710 | 259 | 146 | 5 | 13 | 228 | 17 | 269 | 3.67e-13 | 68.9 |
MsG0680032064.01.T01 | AT5G47470 | 25.941 | 239 | 154 | 6 | 1 | 222 | 48 | 280 | 7.20e-13 | 68.2 |
MsG0680032064.01.T01 | AT5G47470 | 25.941 | 239 | 154 | 6 | 1 | 222 | 48 | 280 | 7.75e-13 | 67.8 |
MsG0680032064.01.T01 | AT5G47470 | 25.941 | 239 | 154 | 6 | 1 | 222 | 20 | 252 | 8.71e-13 | 67.8 |
MsG0680032064.01.T01 | AT3G28070 | 28.916 | 249 | 140 | 6 | 20 | 237 | 20 | 262 | 7.90e-12 | 64.7 |
MsG0680032064.01.T01 | AT3G28070 | 28.916 | 249 | 140 | 6 | 20 | 237 | 20 | 262 | 8.33e-12 | 64.7 |
MsG0680032064.01.T01 | AT3G28080 | 27.376 | 263 | 153 | 7 | 7 | 237 | 3 | 259 | 3.17e-11 | 63.2 |
MsG0680032064.01.T01 | AT5G40230 | 26.693 | 251 | 153 | 5 | 17 | 239 | 21 | 268 | 7.76e-11 | 62.0 |
Find 41 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATCATGGCTGTTATAAT+TGG | 0.113026 | 6:+32959183 | MsG0680032064.01.T01:CDS |
CTTCATACAGTCAGGTATTT+TGG | 0.149137 | 6:+32960616 | MsG0680032064.01.T01:CDS |
CAAATACTGGTTGGTCCTTA+TGG | 0.204380 | 6:+32959508 | MsG0680032064.01.T01:CDS |
ACCTTTGATGTTATCTCCTT+TGG | 0.260967 | 6:-32959466 | None:intergenic |
TGTTTCTAGTTTCCCTTGTT+GGG | 0.337914 | 6:+32958344 | MsG0680032064.01.T01:CDS |
TTGTTTCTAGTTTCCCTTGT+TGG | 0.358231 | 6:+32958343 | MsG0680032064.01.T01:CDS |
AGCAATACCCAGCAAAATTC+AGG | 0.360924 | 6:+32960567 | MsG0680032064.01.T01:CDS |
TCATCATGGCTGTTATAATT+GGG | 0.406285 | 6:+32959184 | MsG0680032064.01.T01:CDS |
GACCTTCAATAGATTTCATA+AGG | 0.409891 | 6:+32959391 | MsG0680032064.01.T01:CDS |
TTTATACAATTTGTATATGC+AGG | 0.416988 | 6:+32958058 | MsG0680032064.01.T01:CDS |
ATGATGCTCTCAGCAAATAC+TGG | 0.425417 | 6:+32959495 | MsG0680032064.01.T01:CDS |
GCTAGGGTGTATGACAATCT+TGG | 0.427472 | 6:+32958006 | MsG0680032064.01.T01:CDS |
TCAAAAGCAGCAATTTCTAA+AGG | 0.431244 | 6:+32958094 | MsG0680032064.01.T01:CDS |
TTCTTTAGCTTCATACAGTC+AGG | 0.441860 | 6:+32960608 | MsG0680032064.01.T01:CDS |
CACCTTATGAAATCTATTGA+AGG | 0.459224 | 6:-32959393 | None:intergenic |
ATAGTATTTGCTTTAGTCAA+AGG | 0.464003 | 6:+32959369 | MsG0680032064.01.T01:CDS |
AATCCTTCTGCATGGAAACT+AGG | 0.471251 | 6:+32960656 | MsG0680032064.01.T01:CDS |
CCCATCCATTACTTTCATCA+TGG | 0.481919 | 6:+32959170 | MsG0680032064.01.T01:CDS |
AACCTGTCAAAATAAGCAAA+TGG | 0.483793 | 6:-32958175 | None:intergenic |
CTTCTGCATGGAAACTAGGA+TGG | 0.504402 | 6:+32960660 | MsG0680032064.01.T01:CDS |
CGATAAACAACAAACACATA+AGG | 0.511217 | 6:-32958124 | None:intergenic |
AAAATGAAGAGTAGTTTGCT+AGG | 0.511951 | 6:+32957989 | None:intergenic |
AGTTTATTGCAACATAGTAA+AGG | 0.512581 | 6:-32959107 | None:intergenic |
ACAATTTGTATATGCAGGAA+TGG | 0.512712 | 6:+32958063 | MsG0680032064.01.T01:CDS |
TACCTGCAAAATAAGCCATA+AGG | 0.517356 | 6:-32959523 | None:intergenic |
TTCACAAAGATTCATTCCAA+AGG | 0.524836 | 6:+32959450 | MsG0680032064.01.T01:CDS |
AACAGCCATGATGAAAGTAA+TGG | 0.555241 | 6:-32959175 | None:intergenic |
GCCATGATGAAAGTAATGGA+TGG | 0.556035 | 6:-32959171 | None:intergenic |
CATCCTAGTTTCCATGCAGA+AGG | 0.557522 | 6:-32960659 | None:intergenic |
CACAACAAGTTGCATGACAA+AGG | 0.565116 | 6:-32958316 | None:intergenic |
TGCTCTCAGCAAATACTGGT+TGG | 0.570774 | 6:+32959499 | MsG0680032064.01.T01:CDS |
CCATGATGAAAGTAATGGAT+GGG | 0.578119 | 6:-32959170 | None:intergenic |
TCCAAAGGAGATAACATCAA+AGG | 0.584499 | 6:+32959465 | MsG0680032064.01.T01:CDS |
TTCTGCATGGAAACTAGGAT+GGG | 0.584632 | 6:+32960661 | MsG0680032064.01.T01:CDS |
AAATGAAGAGTAGTTTGCTA+GGG | 0.593410 | 6:+32957990 | None:intergenic |
TGCAGCAGCAAATGTTGCAG+AGG | 0.596488 | 6:-32959133 | None:intergenic |
CTTCAATAGATTTCATAAGG+TGG | 0.601473 | 6:+32959394 | MsG0680032064.01.T01:CDS |
TGGAGAGGAATCCTTCTGCA+TGG | 0.613429 | 6:+32960648 | MsG0680032064.01.T01:CDS |
TGAGACATCCATACCCAACA+AGG | 0.614317 | 6:-32958357 | None:intergenic |
AGGATTCCTCTCCATTGCAA+TGG | 0.621411 | 6:-32960639 | None:intergenic |
GAGACATCCATACCCAACAA+GGG | 0.706894 | 6:-32958356 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAATAATTTATTAAAAA+TGG | - | Chr6:32959601-32959620 | None:intergenic | 0.0% |
!! | TATTATATTTATAAAATATA+TGG | + | Chr6:32959715-32959734 | MsG0680032064.01.T01:intron | 0.0% |
!! | AAAATAAGAAATAAAATTTC+AGG | + | Chr6:32959273-32959292 | MsG0680032064.01.T01:intron | 10.0% |
!! | AAAATTAAACAGTTAAATTA+AGG | - | Chr6:32960475-32960494 | None:intergenic | 10.0% |
!! | AAATTAAAATAACTAAGATT+AGG | - | Chr6:32960035-32960054 | None:intergenic | 10.0% |
!! | AATAATTTAGTAAAAAGAAA+AGG | - | Chr6:32958227-32958246 | None:intergenic | 10.0% |
!!! | AATTTAAACTTTTTGAAATA+TGG | - | Chr6:32958402-32958421 | None:intergenic | 10.0% |
!!! | ATCTTAGTTATTTTAATTTA+AGG | + | Chr6:32960036-32960055 | MsG0680032064.01.T01:intron | 10.0% |
!!! | ATTATTAATGTATTTTTTCA+TGG | - | Chr6:32959229-32959248 | None:intergenic | 10.0% |
!! | AAAAAAAAAAAAATTGTCCT+TGG | - | Chr6:32958963-32958982 | None:intergenic | 15.0% |
!!! | AATATTGTATAATTTTGCTA+TGG | - | Chr6:32960742-32960761 | None:intergenic | 15.0% |
!!! | ATTTATTTTCACCTTAATTT+TGG | + | Chr6:32958270-32958289 | MsG0680032064.01.T01:intron | 15.0% |
!!! | GAGTTTTTAAATTAAATATC+AGG | - | Chr6:32958686-32958705 | None:intergenic | 15.0% |
!!! | TTAAAATTAGTCATCTTTTT+AGG | + | Chr6:32960243-32960262 | MsG0680032064.01.T01:intron | 15.0% |
!!! | TTTTGAAATATGGAAATAAA+GGG | - | Chr6:32958392-32958411 | None:intergenic | 15.0% |
!!! | TTTTTGAAATATGGAAATAA+AGG | - | Chr6:32958393-32958412 | None:intergenic | 15.0% |
!! | AAGTAAATAATGTGTAACTA+AGG | - | Chr6:32959969-32959988 | None:intergenic | 20.0% |
!! | ATGAGATATAATTAGATATG+TGG | - | Chr6:32959839-32959858 | None:intergenic | 20.0% |
!! | ATTTCAATAAAATACATGCA+TGG | + | Chr6:32959304-32959323 | MsG0680032064.01.T01:intron | 20.0% |
!! | GTTACACATTATTTACTTAT+CGG | + | Chr6:32959971-32959990 | MsG0680032064.01.T01:intron | 20.0% |
!! | TTTATACAATTTGTATATGC+AGG | + | Chr6:32958058-32958077 | MsG0680032064.01.T01:CDS | 20.0% |
!!! | AAAAACTAAAAGAACTTGTT+TGG | + | Chr6:32960351-32960370 | MsG0680032064.01.T01:intron | 20.0% |
!!! | AAAACTAAAAGAACTTGTTT+GGG | + | Chr6:32960352-32960371 | MsG0680032064.01.T01:intron | 20.0% |
!!! | AAAAGATGACTAATTTTAAG+TGG | - | Chr6:32960242-32960261 | None:intergenic | 20.0% |
!!! | AAAGATGACTAATTTTAAGT+GGG | - | Chr6:32960241-32960260 | None:intergenic | 20.0% |
!!! | AAATATCAGGTAGTTTTTTT+TGG | - | Chr6:32958673-32958692 | None:intergenic | 20.0% |
!!! | AACTAATATACTTTTGTTTC+AGG | + | Chr6:32960532-32960551 | MsG0680032064.01.T01:intron | 20.0% |
!!! | ACTAATATACTTTTGTTTCA+GGG | + | Chr6:32960533-32960552 | MsG0680032064.01.T01:intron | 20.0% |
!!! | ATAAAAAGCATTGCAATATA+AGG | - | Chr6:32958043-32958062 | None:intergenic | 20.0% |
!!! | CTTTTAAGTAGTTCAATATT+AGG | + | Chr6:32958898-32958917 | MsG0680032064.01.T01:intron | 20.0% |
!!! | TTTGAAATATGGAAATAAAG+GGG | - | Chr6:32958391-32958410 | None:intergenic | 20.0% |
! | AATAAAATACATGCATGGAA+TGG | + | Chr6:32959309-32959328 | MsG0680032064.01.T01:intron | 25.0% |
! | ACTGCAAAATTCCAAAATTA+AGG | - | Chr6:32958284-32958303 | None:intergenic | 25.0% |
! | AGTTTATTGCAACATAGTAA+AGG | - | Chr6:32959110-32959129 | None:intergenic | 25.0% |
! | ATAGTATTTGCTTTAGTCAA+AGG | + | Chr6:32959369-32959388 | MsG0680032064.01.T01:CDS | 25.0% |
! | CTGTTAACCTGTATTTATAT+AGG | - | Chr6:32959077-32959096 | None:intergenic | 25.0% |
! | GAAACGATTCAAAAACTAAA+AGG | - | Chr6:32960360-32960341 | None:intergenic | 25.0% |
! | TAAACATAATCAACCTACAT+GGG | + | Chr6:32958777-32958796 | MsG0680032064.01.T01:intron | 25.0% |
! | TTAAACATAATCAACCTACA+TGG | + | Chr6:32958776-32958795 | MsG0680032064.01.T01:intron | 25.0% |
! | TTAAGTAGTTCAATATTAGG+TGG | + | Chr6:32958901-32958920 | MsG0680032064.01.T01:intron | 25.0% |
! | TTATGTGCCTATATAAATAC+AGG | + | Chr6:32959067-32959086 | MsG0680032064.01.T01:intron | 25.0% |
! | TTGAAATATGGAAATAAAGG+GGG | - | Chr6:32958390-32958409 | None:intergenic | 25.0% |
! | TTTCATATTAAGCATGCAAT+AGG | + | Chr6:32959566-32959585 | MsG0680032064.01.T01:intron | 25.0% |
!! | AAAAACTAAAAGGACTTGTT+TGG | - | Chr6:32960129-32960148 | None:intergenic | 25.0% |
!! | AAAACTAAAAGGACTTGTTT+GGG | - | Chr6:32960128-32960147 | None:intergenic | 25.0% |
!! | ATATGGACTAAATTGAAGAT+GGG | + | Chr6:32959732-32959751 | MsG0680032064.01.T01:intron | 25.0% |
!! | TATATGGACTAAATTGAAGA+TGG | + | Chr6:32959731-32959750 | MsG0680032064.01.T01:intron | 25.0% |
!! | TGAATTTGAAACCTTACTTA+AGG | - | Chr6:32958527-32958546 | None:intergenic | 25.0% |
!!! | ATTAGTCATCTTTTTAGGTA+TGG | + | Chr6:32960248-32960267 | MsG0680032064.01.T01:intron | 25.0% |
!!! | TTTCAAACAAGTCATTTTAG+AGG | - | Chr6:32960325-32960344 | None:intergenic | 25.0% |
AACCTGTCAAAATAAGCAAA+TGG | - | Chr6:32958178-32958197 | None:intergenic | 30.0% | |
ACAATTTGTATATGCAGGAA+TGG | + | Chr6:32958063-32958082 | MsG0680032064.01.T01:CDS | 30.0% | |
ATGTCTTGTAATCATGAGTT+TGG | - | Chr6:32959997-32960016 | None:intergenic | 30.0% | |
CAATGTTAGTAAGCTGTAAT+GGG | - | Chr6:32958475-32958494 | None:intergenic | 30.0% | |
CACCTTATGAAATCTATTGA+AGG | - | Chr6:32959396-32959415 | None:intergenic | 30.0% | |
CGATAAACAACAAACACATA+AGG | - | Chr6:32958127-32958146 | None:intergenic | 30.0% | |
CTTCAATAGATTTCATAAGG+TGG | + | Chr6:32959394-32959413 | MsG0680032064.01.T01:CDS | 30.0% | |
GAAACTTAAAGGATCACTTT+GGG | + | Chr6:32960410-32960429 | MsG0680032064.01.T01:intron | 30.0% | |
GACCTTCAATAGATTTCATA+AGG | + | Chr6:32959391-32959410 | MsG0680032064.01.T01:CDS | 30.0% | |
GTAAGAGTTTAACTCTATGA+TGG | + | Chr6:32958923-32958942 | MsG0680032064.01.T01:intron | 30.0% | |
TCAAAAGCAGCAATTTCTAA+AGG | + | Chr6:32958094-32958113 | MsG0680032064.01.T01:CDS | 30.0% | |
TCATCATGGCTGTTATAATT+GGG | + | Chr6:32959184-32959203 | MsG0680032064.01.T01:CDS | 30.0% | |
TCTCATTGCTTAGATATATG+TGG | + | Chr6:32959853-32959872 | MsG0680032064.01.T01:intron | 30.0% | |
TGAAACTTAAAGGATCACTT+TGG | + | Chr6:32960409-32960428 | MsG0680032064.01.T01:intron | 30.0% | |
TGGGAAAAACAAACAACTAA+AGG | - | Chr6:32960080-32960099 | None:intergenic | 30.0% | |
TTAAGGTCAAATGCATCTAA+AGG | - | Chr6:32960458-32960477 | None:intergenic | 30.0% | |
TTCACAAAGATTCATTCCAA+AGG | + | Chr6:32959450-32959469 | MsG0680032064.01.T01:CDS | 30.0% | |
TTCATCATGGCTGTTATAAT+TGG | + | Chr6:32959183-32959202 | MsG0680032064.01.T01:CDS | 30.0% | |
! | TAAGATTAGGCAGTTTTTGA+GGG | - | Chr6:32960022-32960041 | None:intergenic | 30.0% |
! | TATGGACTAAATTGAAGATG+GGG | + | Chr6:32959733-32959752 | MsG0680032064.01.T01:intron | 30.0% |
!! | ACTAATTTTAAGTGGGTGTT+AGG | - | Chr6:32960234-32960253 | None:intergenic | 30.0% |
!! | AGTGACATAATTTTGACAAG+TGG | + | Chr6:32959902-32959921 | MsG0680032064.01.T01:intron | 30.0% |
!!! | ATCTTTTTAGGTATGGCAAA+TGG | + | Chr6:32960255-32960274 | MsG0680032064.01.T01:intron | 30.0% |
!!! | TTGGGACTTTTGAAACTTAA+AGG | + | Chr6:32960370-32960389 | MsG0680032064.01.T01:intron | 30.0% |
!!! | TTGGGACTTTTGAAACTTAA+AGG | - | Chr6:32960389-32960370 | None:intergenic | 30.0% |
AACAGCCATGATGAAAGTAA+TGG | - | Chr6:32959178-32959197 | None:intergenic | 35.0% | |
ACAAACAACTAAAGGACCTT+TGG | - | Chr6:32960072-32960091 | None:intergenic | 35.0% | |
ACAGCTTACTAACATTGCAT+TGG | + | Chr6:32958478-32958497 | MsG0680032064.01.T01:intron | 35.0% | |
ACCTTTGATGTTATCTCCTT+TGG | - | Chr6:32959469-32959488 | None:intergenic | 35.0% | |
ATCAAACCTAAGACCTTGAA+AGG | - | Chr6:32958842-32958861 | None:intergenic | 35.0% | |
CAAATACTATAGCCCTGAAA+GGG | - | Chr6:32959359-32959378 | None:intergenic | 35.0% | |
CCAACTATGCTATCTACAAT+AGG | - | Chr6:32960170-32960189 | None:intergenic | 35.0% | |
CCTATTGTAGATAGCATAGT+TGG | + | Chr6:32960167-32960186 | MsG0680032064.01.T01:intron | 35.0% | |
GAAACTTAAAGGACCACTTT+GGG | - | Chr6:32960099-32960118 | None:intergenic | 35.0% | |
GAAACTTAAAGGACGTGTTT+GGG | + | Chr6:32960381-32960400 | MsG0680032064.01.T01:intron | 35.0% | |
GATTCTCCCTGTATCAATAT+CGG | + | Chr6:32958859-32958878 | MsG0680032064.01.T01:intron | 35.0% | |
GCAATGTTAGTAAGCTGTAA+TGG | - | Chr6:32958476-32958495 | None:intergenic | 35.0% | |
GGTTTCAAATTCAAACCTTC+TGG | + | Chr6:32958534-32958553 | MsG0680032064.01.T01:intron | 35.0% | |
TACCTGCAAAATAAGCCATA+AGG | - | Chr6:32959526-32959545 | None:intergenic | 35.0% | |
TCCAAAGGAGATAACATCAA+AGG | + | Chr6:32959465-32959484 | MsG0680032064.01.T01:CDS | 35.0% | |
TGAAACTTAAAGGACCACTT+TGG | - | Chr6:32960100-32960119 | None:intergenic | 35.0% | |
TGAAACTTAAAGGACGTGTT+TGG | + | Chr6:32960380-32960399 | MsG0680032064.01.T01:intron | 35.0% | |
TTAAGGTCAAATGCATCCAA+AGG | + | Chr6:32960053-32960072 | MsG0680032064.01.T01:intron | 35.0% | |
! | CATGGAATGGCAAAGATTTT+GGG | + | Chr6:32959322-32959341 | MsG0680032064.01.T01:intron | 35.0% |
! | CTAACATTGCATTGGTACAA+TGG | + | Chr6:32958486-32958505 | MsG0680032064.01.T01:intron | 35.0% |
! | CTAAGATTAGGCAGTTTTTG+AGG | - | Chr6:32960023-32960042 | None:intergenic | 35.0% |
! | CTTCATACAGTCAGGTATTT+TGG | + | Chr6:32960616-32960635 | MsG0680032064.01.T01:CDS | 35.0% |
! | GGATTTTCATCTTCTTTCTG+TGG | + | Chr6:32960682-32960701 | MsG0680032064.01.T01:CDS | 35.0% |
! | TTCTTTAGCTTCATACAGTC+AGG | + | Chr6:32960608-32960627 | MsG0680032064.01.T01:CDS | 35.0% |
!! | CAAGTCATTTTAGAGGATGA+TGG | - | Chr6:32960318-32960337 | None:intergenic | 35.0% |
!! | CCATGATGAAAGTAATGGAT+GGG | - | Chr6:32959173-32959192 | None:intergenic | 35.0% |
!! | GTTGTTTGTTTTTCCCAAAG+TGG | + | Chr6:32960083-32960102 | MsG0680032064.01.T01:intron | 35.0% |
!! | TGTTTCTAGTTTCCCTTGTT+GGG | + | Chr6:32958344-32958363 | MsG0680032064.01.T01:CDS | 35.0% |
!! | TTGTTTCTAGTTTCCCTTGT+TGG | + | Chr6:32958343-32958362 | MsG0680032064.01.T01:CDS | 35.0% |
!!! | CTCCATTTGCTTATTTTGAC+AGG | + | Chr6:32958173-32958192 | MsG0680032064.01.T01:CDS | 35.0% |
!!! | TTTTTAGGTATGGCAAATGG+TGG | + | Chr6:32960258-32960277 | MsG0680032064.01.T01:intron | 35.0% |
AATCCTTCTGCATGGAAACT+AGG | + | Chr6:32960656-32960675 | MsG0680032064.01.T01:CDS | 40.0% | |
AGCAATACCCAGCAAAATTC+AGG | + | Chr6:32960567-32960586 | MsG0680032064.01.T01:CDS | 40.0% | |
AGTCCACCGATATTGATACA+GGG | - | Chr6:32958868-32958887 | None:intergenic | 40.0% | |
ATCGAAAAATGCCGTTGGAA+GGG | + | Chr6:32958557-32958576 | MsG0680032064.01.T01:intron | 40.0% | |
ATGATGCTCTCAGCAAATAC+TGG | + | Chr6:32959495-32959514 | MsG0680032064.01.T01:CDS | 40.0% | |
CACAACAAGTTGCATGACAA+AGG | - | Chr6:32958319-32958338 | None:intergenic | 40.0% | |
CCCATCCATTACTTTCATCA+TGG | + | Chr6:32959170-32959189 | MsG0680032064.01.T01:CDS | 40.0% | |
CTCATCTTTGGTACCAAATC+TGG | + | Chr6:32960206-32960225 | MsG0680032064.01.T01:intron | 40.0% | |
CTTCGAATATGCTCCTTTCA+AGG | + | Chr6:32958826-32958845 | MsG0680032064.01.T01:intron | 40.0% | |
GCAAATACTATAGCCCTGAA+AGG | - | Chr6:32959360-32959379 | None:intergenic | 40.0% | |
GCTCTATCTTATCCCTTTCA+GGG | + | Chr6:32959344-32959363 | MsG0680032064.01.T01:intron | 40.0% | |
TAGTCCACCGATATTGATAC+AGG | - | Chr6:32958869-32958888 | None:intergenic | 40.0% | |
TATGCTCCTTTCAAGGTCTT+AGG | + | Chr6:32958833-32958852 | MsG0680032064.01.T01:intron | 40.0% | |
TGCTTCCTTGAACTCATCTT+TGG | + | Chr6:32960194-32960213 | MsG0680032064.01.T01:intron | 40.0% | |
TGGAGTTCAAATTCACTCCA+AGG | + | Chr6:32958943-32958962 | MsG0680032064.01.T01:intron | 40.0% | |
TGGTACAATGGAACTTGACT+CGG | + | Chr6:32958498-32958517 | MsG0680032064.01.T01:intron | 40.0% | |
TGGTACCAAAGATGAGTTCA+AGG | - | Chr6:32960202-32960221 | None:intergenic | 40.0% | |
TTAATCTCTGCCGTGAAACT+TGG | - | Chr6:32958605-32958624 | None:intergenic | 40.0% | |
TTCACGGCAGAGATTAATCT+TGG | + | Chr6:32958608-32958627 | MsG0680032064.01.T01:intron | 40.0% | |
TTCTGCATGGAAACTAGGAT+GGG | + | Chr6:32960661-32960680 | MsG0680032064.01.T01:CDS | 40.0% | |
! | ATAGTGAGCCTGAATTTTGC+TGG | - | Chr6:32960578-32960597 | None:intergenic | 40.0% |
! | CAAATACTGGTTGGTCCTTA+TGG | + | Chr6:32959508-32959527 | MsG0680032064.01.T01:CDS | 40.0% |
! | CTTGAAAGGAGCATATTCGA+AGG | - | Chr6:32958828-32958847 | None:intergenic | 40.0% |
! | GCATGGAATGGCAAAGATTT+TGG | + | Chr6:32959321-32959340 | MsG0680032064.01.T01:intron | 40.0% |
! | GCCATGATGAAAGTAATGGA+TGG | - | Chr6:32959174-32959193 | None:intergenic | 40.0% |
! | TAGTGAGCCTGAATTTTGCT+GGG | - | Chr6:32960577-32960596 | None:intergenic | 40.0% |
! | TGACTCGGATTCCTTAAGTA+AGG | + | Chr6:32958513-32958532 | MsG0680032064.01.T01:intron | 40.0% |
!! | TGACTTGATGGTGTTGGTTT+GGG | + | Chr6:32958801-32958820 | MsG0680032064.01.T01:intron | 40.0% |
!! | TTGACTTGATGGTGTTGGTT+TGG | + | Chr6:32958800-32958819 | MsG0680032064.01.T01:intron | 40.0% |
!!! | AGGTATTTTGGCCATTGCAA+TGG | + | Chr6:32960628-32960647 | MsG0680032064.01.T01:CDS | 40.0% |
!!! | GTCCTTATGGCTTATTTTGC+AGG | + | Chr6:32959521-32959540 | MsG0680032064.01.T01:CDS | 40.0% |
ACCATCAAGTCAACCCATGT+AGG | - | Chr6:32958793-32958812 | None:intergenic | 45.0% | |
AGGATTCCTCTCCATTGCAA+TGG | - | Chr6:32960642-32960661 | None:intergenic | 45.0% | |
CATCCTAGTTTCCATGCAGA+AGG | - | Chr6:32960662-32960681 | None:intergenic | 45.0% | |
CTAGTTTCCCTTGTTGGGTA+TGG | + | Chr6:32958349-32958368 | MsG0680032064.01.T01:intron | 45.0% | |
CTTCTGCATGGAAACTAGGA+TGG | + | Chr6:32960660-32960679 | MsG0680032064.01.T01:CDS | 45.0% | |
GAGACATCCATACCCAACAA+GGG | - | Chr6:32958359-32958378 | None:intergenic | 45.0% | |
GATCGAAAAATGCCGTTGGA+AGG | + | Chr6:32958556-32958575 | MsG0680032064.01.T01:intron | 45.0% | |
GCTAGGGTGTATGACAATCT+TGG | + | Chr6:32958006-32958025 | MsG0680032064.01.T01:CDS | 45.0% | |
GGCTCTATCTTATCCCTTTC+AGG | + | Chr6:32959343-32959362 | MsG0680032064.01.T01:intron | 45.0% | |
TCTCCCTGTATCAATATCGG+TGG | + | Chr6:32958862-32958881 | MsG0680032064.01.T01:intron | 45.0% | |
TCTGGATCGAAAAATGCCGT+TGG | + | Chr6:32958552-32958571 | MsG0680032064.01.T01:intron | 45.0% | |
TGAGACATCCATACCCAACA+AGG | - | Chr6:32958360-32958379 | None:intergenic | 45.0% | |
TGCTCTCAGCAAATACTGGT+TGG | + | Chr6:32959499-32959518 | MsG0680032064.01.T01:CDS | 45.0% | |
! | TTTTGGCCATTGCAATGGAG+AGG | + | Chr6:32960633-32960652 | MsG0680032064.01.T01:CDS | 45.0% |
!! | ACCTACATGGGTTGACTTGA+TGG | + | Chr6:32958789-32958808 | MsG0680032064.01.T01:intron | 45.0% |
!! | ACGGCATTTTTCGATCCAGA+AGG | - | Chr6:32958552-32958571 | None:intergenic | 45.0% |
!! | ATGGGTTGACTTGATGGTGT+TGG | + | Chr6:32958795-32958814 | MsG0680032064.01.T01:intron | 45.0% |
AAGGGAGACCCAACTAAAGG+GGG | + | Chr6:32958575-32958594 | MsG0680032064.01.T01:intron | 50.0% | |
GAAGGGAGACCCAACTAAAG+GGG | + | Chr6:32958574-32958593 | MsG0680032064.01.T01:intron | 50.0% | |
GGAAGGGAGACCCAACTAAA+GGG | + | Chr6:32958573-32958592 | MsG0680032064.01.T01:intron | 50.0% | |
TAGTTGGGTCTCCCTTCCAA+CGG | - | Chr6:32958571-32958590 | None:intergenic | 50.0% | |
TGCAGCAGCAAATGTTGCAG+AGG | - | Chr6:32959136-32959155 | None:intergenic | 50.0% | |
TGGAAGGGAGACCCAACTAA+AGG | + | Chr6:32958572-32958591 | MsG0680032064.01.T01:intron | 50.0% | |
TGGAGAGGAATCCTTCTGCA+TGG | + | Chr6:32960648-32960667 | MsG0680032064.01.T01:CDS | 50.0% | |
TGGGTGTTAGGAGCCAGATT+TGG | - | Chr6:32960222-32960241 | None:intergenic | 50.0% | |
GAGACCCAACTAAAGGGGGT+CGG | + | Chr6:32958579-32958598 | MsG0680032064.01.T01:intron | 55.0% | |
TTGGCCGACCCCCTTTAGTT+GGG | - | Chr6:32958586-32958605 | None:intergenic | 55.0% | |
AGGGGGTCGGCCAAGTTTCA+CGG | + | Chr6:32958592-32958611 | MsG0680032064.01.T01:intron | 60.0% | |
CTTGGCCGACCCCCTTTAGT+TGG | - | Chr6:32958587-32958606 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 32957992 | 32960766 | 32957992 | ID=MsG0680032064.01;Name=MsG0680032064.01 |
Chr6 | mRNA | 32957992 | 32960766 | 32957992 | ID=MsG0680032064.01.T01;Parent=MsG0680032064.01;Name=MsG0680032064.01.T01;_AED=0.44;_eAED=0.46;_QI=0|0|0|1|1|1|5|0|257 |
Chr6 | exon | 32957992 | 32958194 | 32957992 | ID=MsG0680032064.01.T01:exon:18207;Parent=MsG0680032064.01.T01 |
Chr6 | exon | 32958303 | 32958365 | 32958303 | ID=MsG0680032064.01.T01:exon:18208;Parent=MsG0680032064.01.T01 |
Chr6 | exon | 32959089 | 32959205 | 32959089 | ID=MsG0680032064.01.T01:exon:18209;Parent=MsG0680032064.01.T01 |
Chr6 | exon | 32959365 | 32959542 | 32959365 | ID=MsG0680032064.01.T01:exon:18210;Parent=MsG0680032064.01.T01 |
Chr6 | exon | 32960554 | 32960766 | 32960554 | ID=MsG0680032064.01.T01:exon:18211;Parent=MsG0680032064.01.T01 |
Chr6 | CDS | 32957992 | 32958194 | 32957992 | ID=MsG0680032064.01.T01:cds;Parent=MsG0680032064.01.T01 |
Chr6 | CDS | 32958303 | 32958365 | 32958303 | ID=MsG0680032064.01.T01:cds;Parent=MsG0680032064.01.T01 |
Chr6 | CDS | 32959089 | 32959205 | 32959089 | ID=MsG0680032064.01.T01:cds;Parent=MsG0680032064.01.T01 |
Chr6 | CDS | 32959365 | 32959542 | 32959365 | ID=MsG0680032064.01.T01:cds;Parent=MsG0680032064.01.T01 |
Chr6 | CDS | 32960554 | 32960766 | 32960554 | ID=MsG0680032064.01.T01:cds;Parent=MsG0680032064.01.T01 |
Gene Sequence |
Protein sequence |