Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019279.01.T01 | XP_003605293.2 | 94.444 | 126 | 6 | 1 | 1 | 125 | 1 | 126 | 1.42E-78 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019279.01.T01 | Q43019 | 56.098 | 123 | 48 | 4 | 1 | 121 | 1 | 119 | 7.93E-36 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048357.01 | MsG0480019279.01 | 0.851737 | 7.304988e-61 | 1.492828e-57 |
| MsG0180000404.01 | MsG0480019279.01 | 0.829723 | 4.387541e-55 | 4.528455e-52 |
| MsG0180001771.01 | MsG0480019279.01 | 0.809971 | 1.453326e-50 | 8.654147e-48 |
| MsG0180003741.01 | MsG0480019279.01 | 0.875256 | 3.554754e-68 | 1.649007e-64 |
| MsG0180005153.01 | MsG0480019279.01 | 0.800008 | 1.762930e-48 | 8.119439e-46 |
| MsG0380011496.01 | MsG0480019279.01 | 0.840864 | 6.723904e-58 | 9.705455e-55 |
| MsG0380011501.01 | MsG0480019279.01 | 0.833275 | 5.857385e-56 | 6.712514e-53 |
| MsG0480018909.01 | MsG0480019279.01 | 0.847710 | 9.733735e-60 | 1.745274e-56 |
| MsG0480019279.01 | MsG0480024022.01 | 0.809916 | 1.493375e-50 | 8.879777e-48 |
| MsG0480019279.01 | MsG0580024966.01 | 0.872862 | 2.295672e-67 | 9.754862e-64 |
| MsG0480019279.01 | MsG0580025466.01 | 0.822621 | 2.147682e-53 | 1.807207e-50 |
| MsG0480019279.01 | MsG0580025973.01 | 0.819846 | 9.369910e-53 | 7.293181e-50 |
| MsG0480019279.01 | MsG0580025974.01 | 0.827017 | 1.973004e-54 | 1.881418e-51 |
| MsG0480019279.01 | MsG0580026000.01 | 0.804289 | 2.319700e-49 | 1.191488e-46 |
| MsG0480019279.01 | MsG0580027925.01 | 0.838265 | 3.186198e-57 | 4.244748e-54 |
| MsG0480019279.01 | MsG0580028960.01 | 0.818328 | 2.075716e-52 | 1.549059e-49 |
| MsG0480019279.01 | MsG0580029310.01 | 0.865162 | 7.210904e-65 | 2.323249e-61 |
| MsG0480019279.01 | MsG0580029417.01 | 0.828318 | 9.610669e-55 | 9.518782e-52 |
| MsG0480019279.01 | MsG0580029418.01 | 0.831500 | 1.611674e-55 | 1.752218e-52 |
| MsG0480019279.01 | MsG0680030328.01 | 0.807476 | 4.962702e-50 | 2.766871e-47 |
| MsG0480019279.01 | MsG0680031342.01 | 0.808425 | 3.116151e-50 | 1.781206e-47 |
| MsG0480019279.01 | MsG0680031707.01 | 0.837682 | 4.501324e-57 | 5.891912e-54 |
| MsG0480019279.01 | MsG0680031959.01 | 0.813072 | 3.079388e-51 | 1.990958e-48 |
| MsG0480019279.01 | MsG0680032064.01 | 0.807836 | 4.159771e-50 | 2.341067e-47 |
| MsG0480019279.01 | MsG0680035658.01 | 0.801501 | 8.739295e-49 | 4.180332e-46 |
| MsG0480019279.01 | MsG0780038847.01 | 0.803842 | 2.874697e-49 | 1.459715e-46 |
| MsG0480019279.01 | MsG0780040286.01 | 0.805263 | 1.452612e-49 | 7.650236e-47 |
| MsG0480019279.01 | MsG0780040287.01 | 0.802741 | 4.858557e-49 | 2.398463e-46 |
| MsG0480019279.01 | MsG0780040846.01 | 0.855769 | 5.051654e-62 | 1.179240e-58 |
| MsG0480019279.01 | MsG0780040855.01 | 0.800384 | 1.478302e-48 | 6.874084e-46 |
| MsG0480019279.01 | MsG0780040966.01 | 0.819243 | 1.286361e-52 | 9.845566e-50 |
| MsG0480019279.01 | MsG0780041259.01 | 0.859066 | 5.348810e-63 | 1.394430e-59 |
| MsG0480019279.01 | MsG0780041698.01 | 0.839640 | 1.404003e-57 | 1.950900e-54 |
| MsG0480019279.01 | MsG0880041834.01 | 0.809509 | 1.827121e-50 | 1.074771e-47 |
| MsG0480019279.01 | MsG0880041858.01 | 0.820000 | 8.639960e-53 | 6.754062e-50 |
| MsG0480019279.01 | MsG0880042442.01 | 0.800195 | 1.615212e-48 | 7.474441e-46 |
| MsG0480019279.01 | MsG0880042958.01 | 0.819776 | 9.725036e-53 | 7.554996e-50 |
| MsG0480019279.01 | MsG0880042959.01 | 0.820757 | 5.794002e-53 | 4.625281e-50 |
| MsG0480019279.01 | MsG0880044704.01 | 0.807265 | 5.498780e-50 | 3.049106e-47 |
| MsG0480019279.01 | MsG0880045585.01 | 0.852427 | 4.649634e-61 | 9.712101e-58 |
| MsG0480019279.01 | MsG0880045586.01 | 0.831121 | 1.997471e-55 | 2.147246e-52 |
| MsG0380016465.01 | MsG0480019279.01 | 0.849510 | 3.087615e-60 | 5.866582e-57 |
| MsG0280007305.01 | MsG0480019279.01 | 0.830342 | 3.099132e-55 | 3.256255e-52 |
| MsG0280007414.01 | MsG0480019279.01 | 0.803888 | 2.812022e-49 | 1.429621e-46 |
| MsG0280008390.01 | MsG0480019279.01 | 0.837451 | 5.159621e-57 | 6.704921e-54 |
| MsG0280008391.01 | MsG0480019279.01 | 0.805948 | 1.043084e-49 | 5.591404e-47 |
| MsG0280008392.01 | MsG0480019279.01 | 0.827159 | 1.825135e-54 | 1.747693e-51 |
| MsG0280008395.01 | MsG0480019279.01 | 0.809721 | 1.644835e-50 | 9.730580e-48 |
| MsG0280010320.01 | MsG0480019279.01 | 0.805581 | 1.245698e-49 | 6.614675e-47 |
| MsG0280010489.01 | MsG0480019279.01 | 0.801908 | 7.211431e-49 | 3.485212e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480019340.01 | MsG0480019279.01 | PPI |
| MsG0480019341.01 | MsG0480019279.01 | PPI |
| MsG0580027761.01 | MsG0480019279.01 | PPI |
| MsG0480019285.01 | MsG0480019279.01 | PPI |
| MsG0580027763.01 | MsG0480019279.01 | PPI |
| MsG0480019283.01 | MsG0480019279.01 | PPI |
| MsG0480019341.01 | MsG0480019279.01 | PPI |
| MsG0480019284.01 | MsG0480019279.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019279.01.T01 | MTR_4g028180 | 94.444 | 126 | 6 | 1 | 1 | 125 | 1 | 126 | 1.72e-82 | 238 |
| MsG0480019279.01.T01 | MTR_7g073170 | 46.667 | 120 | 58 | 2 | 4 | 123 | 3 | 116 | 2.74e-32 | 110 |
| MsG0480019279.01.T01 | MTR_7g073150 | 45.455 | 121 | 61 | 2 | 4 | 124 | 3 | 118 | 3.34e-30 | 105 |
| MsG0480019279.01.T01 | MTR_4g428370 | 48.673 | 113 | 52 | 3 | 9 | 121 | 62 | 168 | 1.53e-28 | 102 |
| MsG0480019279.01.T01 | MTR_4g028190 | 40.323 | 124 | 70 | 1 | 1 | 124 | 1 | 120 | 1.78e-27 | 98.6 |
| MsG0480019279.01.T01 | MTR_7g072930 | 43.548 | 124 | 64 | 3 | 4 | 126 | 3 | 121 | 1.80e-26 | 96.7 |
| MsG0480019279.01.T01 | MTR_4g027800 | 44.248 | 113 | 57 | 3 | 9 | 121 | 5 | 111 | 1.15e-25 | 93.6 |
| MsG0480019279.01.T01 | MTR_4g027840 | 44.248 | 113 | 57 | 3 | 9 | 121 | 5 | 111 | 5.29e-25 | 92.8 |
| MsG0480019279.01.T01 | MTR_7g072900 | 42.500 | 120 | 64 | 2 | 4 | 123 | 3 | 117 | 8.05e-24 | 89.0 |
| MsG0480019279.01.T01 | MTR_7g072993 | 44.715 | 123 | 61 | 3 | 4 | 124 | 3 | 120 | 1.15e-23 | 89.4 |
| MsG0480019279.01.T01 | MTR_2g062600 | 37.815 | 119 | 67 | 3 | 6 | 123 | 1 | 113 | 3.17e-23 | 87.4 |
| MsG0480019279.01.T01 | MTR_7g073130 | 42.857 | 126 | 61 | 4 | 4 | 126 | 3 | 120 | 4.09e-23 | 87.4 |
| MsG0480019279.01.T01 | MTR_1g040335 | 44.715 | 123 | 61 | 3 | 4 | 125 | 3 | 119 | 5.45e-23 | 87.0 |
| MsG0480019279.01.T01 | MTR_7g072830 | 39.024 | 123 | 69 | 3 | 4 | 125 | 3 | 120 | 6.51e-23 | 86.7 |
| MsG0480019279.01.T01 | MTR_4g029210 | 38.983 | 118 | 66 | 3 | 9 | 126 | 5 | 116 | 3.64e-22 | 84.7 |
| MsG0480019279.01.T01 | MTR_4g029350 | 39.837 | 123 | 67 | 3 | 4 | 126 | 2 | 117 | 3.85e-22 | 84.7 |
| MsG0480019279.01.T01 | MTR_7g072730 | 37.705 | 122 | 70 | 3 | 4 | 124 | 3 | 119 | 1.59e-21 | 84.3 |
| MsG0480019279.01.T01 | MTR_4g029390 | 39.837 | 123 | 67 | 3 | 4 | 126 | 2 | 117 | 8.86e-21 | 81.3 |
| MsG0480019279.01.T01 | MTR_7g073120 | 38.889 | 126 | 69 | 4 | 1 | 124 | 1 | 120 | 1.02e-20 | 82.0 |
| MsG0480019279.01.T01 | MTR_7g072980 | 37.705 | 122 | 70 | 3 | 4 | 124 | 3 | 119 | 1.95e-20 | 80.9 |
| MsG0480019279.01.T01 | MTR_7g073060 | 36.885 | 122 | 72 | 2 | 4 | 125 | 3 | 119 | 6.22e-20 | 79.0 |
| MsG0480019279.01.T01 | MTR_7g072810 | 40.984 | 122 | 60 | 4 | 4 | 124 | 3 | 113 | 1.40e-19 | 78.6 |
| MsG0480019279.01.T01 | MTR_7g073100 | 37.190 | 121 | 71 | 2 | 4 | 124 | 3 | 118 | 1.75e-19 | 79.0 |
| MsG0480019279.01.T01 | MTR_7g072960 | 38.710 | 124 | 56 | 3 | 4 | 126 | 3 | 107 | 2.67e-19 | 77.8 |
| MsG0480019279.01.T01 | MTR_7g072760 | 37.903 | 124 | 71 | 3 | 4 | 125 | 3 | 122 | 2.47e-16 | 70.1 |
| MsG0480019279.01.T01 | MTR_7g073030 | 35.537 | 121 | 73 | 2 | 4 | 124 | 3 | 118 | 1.10e-15 | 69.3 |
| MsG0480019279.01.T01 | MTR_7g451500 | 31.183 | 93 | 60 | 1 | 31 | 123 | 9 | 97 | 1.09e-14 | 65.1 |
| MsG0480019279.01.T01 | MTR_3g046515 | 29.508 | 122 | 80 | 2 | 2 | 122 | 3 | 119 | 2.47e-13 | 62.4 |
| MsG0480019279.01.T01 | MTR_3g467100 | 29.839 | 124 | 74 | 5 | 1 | 123 | 1 | 112 | 7.10e-13 | 60.8 |
| MsG0480019279.01.T01 | MTR_3g056640 | 32.456 | 114 | 71 | 2 | 10 | 122 | 11 | 119 | 1.74e-12 | 60.1 |
| MsG0480019279.01.T01 | MTR_1g040330 | 35.537 | 121 | 71 | 3 | 4 | 123 | 3 | 117 | 1.89e-12 | 60.1 |
| MsG0480019279.01.T01 | MTR_3g046530 | 28.689 | 122 | 81 | 2 | 2 | 122 | 3 | 119 | 3.38e-12 | 59.3 |
| MsG0480019279.01.T01 | MTR_3g046540 | 28.689 | 122 | 81 | 2 | 2 | 122 | 3 | 119 | 4.75e-12 | 58.9 |
| MsG0480019279.01.T01 | MTR_4g028250 | 33.613 | 119 | 72 | 4 | 9 | 125 | 5 | 118 | 1.69e-11 | 57.4 |
| MsG0480019279.01.T01 | MTR_3g464130 | 34.409 | 93 | 55 | 2 | 31 | 122 | 19 | 106 | 5.05e-11 | 55.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480019279.01.T01 | AT2G15050 | 52.101 | 119 | 51 | 3 | 9 | 124 | 6 | 121 | 2.73e-32 | 110 |
| MsG0480019279.01.T01 | AT2G15050 | 52.137 | 117 | 50 | 3 | 9 | 122 | 6 | 119 | 1.11e-31 | 109 |
| MsG0480019279.01.T01 | AT2G15050 | 52.252 | 111 | 47 | 3 | 9 | 116 | 6 | 113 | 1.05e-29 | 103 |
| MsG0480019279.01.T01 | AT2G38540 | 44.737 | 114 | 59 | 2 | 9 | 122 | 6 | 115 | 1.02e-28 | 101 |
| MsG0480019279.01.T01 | AT5G01870 | 44.643 | 112 | 56 | 4 | 11 | 122 | 8 | 113 | 2.85e-27 | 97.8 |
| MsG0480019279.01.T01 | AT3G08770 | 48.980 | 98 | 46 | 3 | 25 | 122 | 17 | 110 | 1.14e-25 | 93.6 |
| MsG0480019279.01.T01 | AT3G08770 | 48.980 | 98 | 46 | 3 | 25 | 122 | 17 | 110 | 1.28e-25 | 93.6 |
| MsG0480019279.01.T01 | AT5G59320 | 48.148 | 108 | 50 | 3 | 15 | 122 | 11 | 112 | 5.81e-25 | 92.0 |
| MsG0480019279.01.T01 | AT5G59310 | 48.113 | 106 | 43 | 4 | 16 | 121 | 15 | 108 | 6.67e-24 | 89.0 |
| MsG0480019279.01.T01 | AT2G38530 | 43.860 | 114 | 60 | 2 | 9 | 122 | 6 | 115 | 2.96e-23 | 87.8 |
| MsG0480019279.01.T01 | AT3G51600 | 43.860 | 114 | 60 | 2 | 9 | 122 | 6 | 115 | 1.81e-22 | 85.5 |
| MsG0480019279.01.T01 | AT3G51590 | 40.351 | 114 | 62 | 3 | 9 | 122 | 6 | 113 | 1.45e-21 | 83.2 |
| MsG0480019279.01.T01 | AT2G18370 | 35.088 | 114 | 67 | 2 | 10 | 121 | 4 | 112 | 1.29e-18 | 75.9 |
| MsG0480019279.01.T01 | AT4G33355 | 35.000 | 120 | 71 | 3 | 4 | 123 | 5 | 117 | 7.77e-15 | 66.2 |
| MsG0480019279.01.T01 | AT4G33355 | 34.454 | 119 | 71 | 3 | 4 | 122 | 5 | 116 | 7.95e-14 | 63.5 |
Find 32 sgRNAs with CRISPR-Local
Find 31 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTTTGAGCCATAGTATTA+AGG | 0.282339 | 4:+17657638 | None:intergenic |
| GAAGACCAGCAGCAAGATTA+AGG | 0.290840 | 4:+17657539 | None:intergenic |
| GGCAACTAAGCTTGTTTGTT+TGG | 0.318434 | 4:-17657809 | MsG0480019279.01.T01:CDS |
| ATTGTGTTTCTTGTAACTTT+TGG | 0.338311 | 4:-17657784 | MsG0480019279.01.T01:CDS |
| GCCCTAATACCGACTGTAAC+AGG | 0.378156 | 4:-17657480 | MsG0480019279.01.T01:CDS |
| TACCTGTTACAGTCGGTATT+AGG | 0.379758 | 4:+17657478 | None:intergenic |
| GGGTATAAGCTTGTCACAAC+TGG | 0.381388 | 4:+17657727 | None:intergenic |
| ACCTGTTACAGTCGGTATTA+GGG | 0.395247 | 4:+17657479 | None:intergenic |
| CATCATGGGTTACTCAACTA+TGG | 0.397979 | 4:-17657830 | None:intergenic |
| GTAACAGCTGCTTCAGCCTT+AGG | 0.410392 | 4:+17657760 | None:intergenic |
| AGTAAGGAACCTTAATACTA+TGG | 0.425103 | 4:-17657647 | MsG0480019279.01.T01:CDS |
| GCTAACAGCATTCTTAATAC+AGG | 0.426517 | 4:+17657591 | None:intergenic |
| AACAGCTCTACGATCATTTG+TGG | 0.431202 | 4:+17657618 | None:intergenic |
| TTAAACCTTAATCTTGCTGC+TGG | 0.432503 | 4:-17657544 | MsG0480019279.01.T01:CDS |
| AGTCGGTATTAGGGCTGATC+TGG | 0.443403 | 4:+17657488 | None:intergenic |
| TGTGTTTCTTACATTATGAC+TGG | 0.454062 | 4:-17657703 | MsG0480019279.01.T01:CDS |
| CACAGTGTTGTAATGGAGTA+AGG | 0.467403 | 4:-17657663 | MsG0480019279.01.T01:CDS |
| AAGAATGCTGTTAGCCAAAG+TGG | 0.478268 | 4:-17657583 | MsG0480019279.01.T01:CDS |
| GTTCCAGCACAGTGTTGTAA+TGG | 0.512359 | 4:-17657670 | MsG0480019279.01.T01:CDS |
| ATGTTAACACCACATTTCCT+TGG | 0.522311 | 4:+17657517 | None:intergenic |
| GTATTAGGGCTGATCTGGTA+AGG | 0.526182 | 4:+17657493 | None:intergenic |
| ACTCCATTACAACACTGTGC+TGG | 0.541228 | 4:+17657667 | None:intergenic |
| GCTTGTCACAACTGGACCAC+AGG | 0.541996 | 4:+17657735 | None:intergenic |
| ATCTTGCTGCTGGTCTTCCA+AGG | 0.551966 | 4:-17657534 | MsG0480019279.01.T01:CDS |
| ACATATGTGAATATTATAAG+TGG | 0.553344 | 4:+17657455 | None:intergenic |
| TAGTGTAACTGAAACCACTT+TGG | 0.557954 | 4:+17657569 | None:intergenic |
| GTTTCTTACATTATGACTGG+TGG | 0.579604 | 4:-17657700 | MsG0480019279.01.T01:CDS |
| GCTGGTCTTCCAAGGAAATG+TGG | 0.584199 | 4:-17657526 | MsG0480019279.01.T01:CDS |
| GAAGCAGCTGTTACATCCTG+TGG | 0.593294 | 4:-17657751 | MsG0480019279.01.T01:CDS |
| GTCATAATGTAAGAAACACA+AGG | 0.653065 | 4:+17657706 | None:intergenic |
| TAAGTGGTACCTGTTACAGT+CGG | 0.691959 | 4:+17657471 | None:intergenic |
| TCATAATGTAAGAAACACAA+GGG | 0.708823 | 4:+17657707 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TCATAATGTAAGAAACACAA+GGG | + | Chr4:17657590-17657609 | None:intergenic | 25.0% |
| !! | ATTGTGTTTCTTGTAACTTT+TGG | - | Chr4:17657510-17657529 | MsG0480019279.01.T01:CDS | 25.0% |
| AGTAAGGAACCTTAATACTA+TGG | - | Chr4:17657647-17657666 | MsG0480019279.01.T01:CDS | 30.0% | |
| GTCATAATGTAAGAAACACA+AGG | + | Chr4:17657591-17657610 | None:intergenic | 30.0% | |
| TGTGTTTCTTACATTATGAC+TGG | - | Chr4:17657591-17657610 | MsG0480019279.01.T01:CDS | 30.0% | |
| ATGTTAACACCACATTTCCT+TGG | + | Chr4:17657780-17657799 | None:intergenic | 35.0% | |
| GCTAACAGCATTCTTAATAC+AGG | + | Chr4:17657706-17657725 | None:intergenic | 35.0% | |
| GTTTCTTACATTATGACTGG+TGG | - | Chr4:17657594-17657613 | MsG0480019279.01.T01:CDS | 35.0% | |
| TAGTGTAACTGAAACCACTT+TGG | + | Chr4:17657728-17657747 | None:intergenic | 35.0% | |
| TGGTTTGAGCCATAGTATTA+AGG | + | Chr4:17657659-17657678 | None:intergenic | 35.0% | |
| TTAAACCTTAATCTTGCTGC+TGG | - | Chr4:17657750-17657769 | MsG0480019279.01.T01:CDS | 35.0% | |
| ! | TCTTGTAACTTTTGGTCCTA+AGG | - | Chr4:17657518-17657537 | MsG0480019279.01.T01:CDS | 35.0% |
| AACAGCTCTACGATCATTTG+TGG | + | Chr4:17657679-17657698 | None:intergenic | 40.0% | |
| AAGAATGCTGTTAGCCAAAG+TGG | - | Chr4:17657711-17657730 | MsG0480019279.01.T01:CDS | 40.0% | |
| ACCTGTTACAGTCGGTATTA+GGG | + | Chr4:17657818-17657837 | None:intergenic | 40.0% | |
| TAAGTGGTACCTGTTACAGT+CGG | + | Chr4:17657826-17657845 | None:intergenic | 40.0% | |
| TACCTGTTACAGTCGGTATT+AGG | + | Chr4:17657819-17657838 | None:intergenic | 40.0% | |
| ! | CACAGTGTTGTAATGGAGTA+AGG | - | Chr4:17657631-17657650 | MsG0480019279.01.T01:CDS | 40.0% |
| ! | GGCAACTAAGCTTGTTTGTT+TGG | - | Chr4:17657485-17657504 | MsG0480019279.01.T01:CDS | 40.0% |
| ACTCCATTACAACACTGTGC+TGG | + | Chr4:17657630-17657649 | None:intergenic | 45.0% | |
| GAAGACCAGCAGCAAGATTA+AGG | + | Chr4:17657758-17657777 | None:intergenic | 45.0% | |
| GGGTATAAGCTTGTCACAAC+TGG | + | Chr4:17657570-17657589 | None:intergenic | 45.0% | |
| GTATTAGGGCTGATCTGGTA+AGG | + | Chr4:17657804-17657823 | None:intergenic | 45.0% | |
| GTTCCAGCACAGTGTTGTAA+TGG | - | Chr4:17657624-17657643 | MsG0480019279.01.T01:CDS | 45.0% | |
| AGTCGGTATTAGGGCTGATC+TGG | + | Chr4:17657809-17657828 | None:intergenic | 50.0% | |
| GAAGCAGCTGTTACATCCTG+TGG | - | Chr4:17657543-17657562 | MsG0480019279.01.T01:CDS | 50.0% | |
| GTAACAGCTGCTTCAGCCTT+AGG | + | Chr4:17657537-17657556 | None:intergenic | 50.0% | |
| ! | GCCCTAATACCGACTGTAAC+AGG | - | Chr4:17657814-17657833 | MsG0480019279.01.T01:CDS | 50.0% |
| !! | ATCTTGCTGCTGGTCTTCCA+AGG | - | Chr4:17657760-17657779 | MsG0480019279.01.T01:CDS | 50.0% |
| !! | GCTGGTCTTCCAAGGAAATG+TGG | - | Chr4:17657768-17657787 | MsG0480019279.01.T01:CDS | 50.0% |
| GCTTGTCACAACTGGACCAC+AGG | + | Chr4:17657562-17657581 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 17657468 | 17657848 | 17657468 | ID=MsG0480019279.01;Name=MsG0480019279.01 |
| Chr4 | mRNA | 17657468 | 17657848 | 17657468 | ID=MsG0480019279.01.T01;Parent=MsG0480019279.01;Name=MsG0480019279.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|126 |
| Chr4 | exon | 17657468 | 17657848 | 17657468 | ID=MsG0480019279.01.T01:exon:5481;Parent=MsG0480019279.01.T01 |
| Chr4 | CDS | 17657468 | 17657848 | 17657468 | ID=MsG0480019279.01.T01:cds;Parent=MsG0480019279.01.T01 |
| Gene Sequence |
| Protein sequence |
