AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680032247.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032247.01.T01 MTR_6g038720 81.098 164 31 0 1 164 80 243 3.31e-90 270
MsG0680032247.01.T01 MTR_8g042660 40.076 262 106 4 7 218 732 992 7.28e-46 166
MsG0680032247.01.T01 MTR_8g087130 40.506 237 130 5 4 235 519 749 4.83e-44 160
MsG0680032247.01.T01 MTR_8g042440 39.231 260 107 4 9 218 737 995 6.79e-43 157
MsG0680032247.01.T01 MTR_8g042470 36.614 254 116 3 4 213 730 982 4.90e-42 155
MsG0680032247.01.T01 MTR_8g042470 36.614 254 116 3 4 213 730 982 5.04e-42 155
MsG0680032247.01.T01 MTR_8g042470 36.614 254 116 3 4 213 730 982 1.05e-41 154
MsG0680032247.01.T01 MTR_8g075440 42.056 214 113 5 4 212 732 939 2.12e-41 153
MsG0680032247.01.T01 MTR_1g060030 43.269 208 111 5 4 208 561 764 3.93e-41 152
MsG0680032247.01.T01 MTR_6g077500 42.174 230 117 8 7 230 741 960 5.66e-41 152
MsG0680032247.01.T01 MTR_6g075950 39.474 228 130 5 4 229 596 817 1.48e-40 150
MsG0680032247.01.T01 MTR_0038s0060 39.474 228 130 5 4 229 614 835 1.64e-40 150
MsG0680032247.01.T01 MTR_6g075970 41.667 216 118 5 4 217 740 949 5.85e-40 149
MsG0680032247.01.T01 MTR_0038s0080 41.667 216 118 5 4 217 740 949 5.85e-40 149
MsG0680032247.01.T01 MTR_6g075690 40.741 216 116 4 4 215 708 915 1.21e-39 148
MsG0680032247.01.T01 MTR_8g042650 38.281 256 111 5 4 213 725 979 2.96e-39 147
MsG0680032247.01.T01 MTR_6g078480 42.105 209 111 3 4 212 901 1099 1.03e-38 145
MsG0680032247.01.T01 MTR_6g078480 42.105 209 111 3 4 212 723 921 1.08e-38 145
MsG0680032247.01.T01 MTR_3g006280 40.670 209 109 4 4 212 1233 1426 1.14e-38 145
MsG0680032247.01.T01 MTR_5g038180 38.462 247 129 8 7 242 745 979 3.82e-38 144
MsG0680032247.01.T01 MTR_6g079140 38.679 212 124 3 4 212 974 1182 1.15e-37 142
MsG0680032247.01.T01 MTR_6g077640 38.679 212 124 3 4 212 954 1162 1.39e-37 142
MsG0680032247.01.T01 MTR_0019s0100 41.410 227 113 8 4 220 740 956 1.46e-37 142
MsG0680032247.01.T01 MTR_6g079120 40.191 209 114 3 4 212 835 1032 2.71e-37 141
MsG0680032247.01.T01 MTR_8g039910 38.610 259 104 5 7 212 744 1000 4.72e-37 140
MsG0680032247.01.T01 MTR_8g039870 38.610 259 104 5 7 212 744 1000 4.72e-37 140
MsG0680032247.01.T01 MTR_1g019550 40.376 213 95 3 4 212 1292 1476 2.50e-36 139
MsG0680032247.01.T01 MTR_1g019550 40.376 213 95 3 4 212 1325 1509 2.54e-36 138
MsG0680032247.01.T01 MTR_1g019550 40.376 213 95 3 4 212 1148 1332 2.81e-36 138
MsG0680032247.01.T01 MTR_1g063970 39.234 209 118 5 4 208 376 579 1.59e-35 135
MsG0680032247.01.T01 MTR_4g016610 40.476 210 117 5 4 209 715 920 3.02e-35 135
MsG0680032247.01.T01 MTR_0007s0150 37.981 208 119 2 5 212 270 467 4.55e-35 134
MsG0680032247.01.T01 MTR_2g041070 40.976 205 111 7 4 203 719 918 1.33e-34 133
MsG0680032247.01.T01 MTR_2g041070 40.976 205 111 7 4 203 719 918 1.50e-34 133
MsG0680032247.01.T01 MTR_6g076220 40.465 215 117 6 4 215 739 945 1.84e-34 133
MsG0680032247.01.T01 MTR_1g063960 38.164 207 121 4 4 207 706 908 7.95e-34 131
MsG0680032247.01.T01 MTR_6g073250 40.865 208 112 6 4 207 732 932 2.25e-33 130
MsG0680032247.01.T01 MTR_6g083860 39.698 199 112 6 19 212 715 910 2.79e-33 129
MsG0680032247.01.T01 MTR_6g078930 38.278 209 118 3 4 212 1154 1351 5.53e-33 129
MsG0680032247.01.T01 MTR_3g019080 37.156 218 124 6 3 212 710 922 7.59e-33 128
MsG0680032247.01.T01 MTR_0012s0290 38.647 207 112 4 6 212 729 920 1.53e-32 127
MsG0680032247.01.T01 MTR_0012s0290 38.647 207 112 4 6 212 847 1038 1.84e-32 127
MsG0680032247.01.T01 MTR_6g076090 42.105 209 113 7 4 209 731 934 5.18e-31 123
MsG0680032247.01.T01 MTR_6g072460 38.426 216 124 5 4 216 723 932 1.28e-29 119
MsG0680032247.01.T01 MTR_6g071430 33.803 213 115 4 3 213 747 935 2.21e-29 118
MsG0680032247.01.T01 MTR_6g072480 37.727 220 119 7 4 214 732 942 3.07e-29 118
MsG0680032247.01.T01 MTR_0277s0020 37.799 209 118 6 9 211 721 923 1.03e-28 116
MsG0680032247.01.T01 MTR_0277s0020 37.799 209 118 6 9 211 697 899 1.18e-28 116
MsG0680032247.01.T01 MTR_6g072250 40.462 173 94 5 45 215 688 853 3.94e-28 114
MsG0680032247.01.T01 MTR_6g071895 40.462 173 94 5 45 215 688 853 3.94e-28 114
MsG0680032247.01.T01 MTR_6g071895 40.462 173 94 5 45 215 468 633 4.09e-28 114
MsG0680032247.01.T01 MTR_6g079090 37.745 204 113 6 6 209 988 1177 4.14e-28 114
MsG0680032247.01.T01 MTR_6g072320 35.349 215 129 8 9 218 697 906 1.45e-27 113
MsG0680032247.01.T01 MTR_6g071945 35.349 215 129 8 9 218 697 906 1.45e-27 113
MsG0680032247.01.T01 MTR_6g471270 35.047 214 112 8 4 213 209 399 5.57e-27 110
MsG0680032247.01.T01 MTR_6g471220 44.295 149 76 5 69 214 7 151 7.53e-27 105
MsG0680032247.01.T01 MTR_0419s0040 38.424 203 114 5 9 206 714 910 8.75e-27 110
MsG0680032247.01.T01 MTR_5g040490 33.040 227 135 5 4 217 733 955 1.90e-26 109
MsG0680032247.01.T01 MTR_6g074810 34.061 229 142 7 7 230 712 936 2.22e-26 109
MsG0680032247.01.T01 MTR_6g074660 35.349 215 125 6 9 216 715 922 2.25e-26 109
MsG0680032247.01.T01 MTR_8g069625 36.275 204 118 6 19 216 704 901 2.39e-26 109
MsG0680032247.01.T01 MTR_6g075880 34.722 216 88 6 6 219 727 891 2.89e-26 109
MsG0680032247.01.T01 MTR_8g032830 43.836 146 78 3 68 212 816 958 4.62e-26 108
MsG0680032247.01.T01 MTR_6g471270 35.577 208 107 8 4 207 209 393 6.11e-26 106
MsG0680032247.01.T01 MTR_0277s0010 39.336 211 113 8 9 211 697 900 7.25e-26 108
MsG0680032247.01.T01 MTR_0277s0010 39.336 211 113 8 9 211 624 827 7.58e-26 108
MsG0680032247.01.T01 MTR_6g079000 34.762 210 121 3 4 212 1409 1603 1.81e-25 107
MsG0680032247.01.T01 MTR_6g008140 35.749 207 110 6 3 209 907 1090 2.92e-25 106
MsG0680032247.01.T01 MTR_6g008140 35.749 207 110 6 3 209 731 914 3.30e-25 106
MsG0680032247.01.T01 MTR_6g008140 35.749 207 110 6 3 209 592 775 3.53e-25 106
MsG0680032247.01.T01 MTR_6g008140 35.749 207 110 6 3 209 577 760 4.48e-25 105
MsG0680032247.01.T01 MTR_6g074650 30.738 244 136 5 11 252 556 768 4.70e-25 105
MsG0680032247.01.T01 MTR_3g012470 32.143 224 134 5 7 220 720 935 5.52e-25 105
MsG0680032247.01.T01 MTR_3g012470 32.143 224 134 5 7 220 720 935 6.53e-25 105
MsG0680032247.01.T01 MTR_6g071790 35.484 217 131 7 9 220 682 894 1.15e-24 104
MsG0680032247.01.T01 MTR_6g074875 33.333 207 132 5 9 213 695 897 1.18e-24 104
MsG0680032247.01.T01 MTR_6g078420 31.441 229 136 7 3 220 726 944 1.81e-24 103
MsG0680032247.01.T01 MTR_6g472230 34.862 218 109 8 3 213 883 1074 1.96e-24 103
MsG0680032247.01.T01 MTR_6g472300 34.562 217 111 7 3 213 699 890 2.18e-24 103
MsG0680032247.01.T01 MTR_6g072450 34.742 213 130 5 9 219 699 904 3.35e-24 103
MsG0680032247.01.T01 MTR_6g072460 42.675 157 87 2 4 159 723 877 3.35e-24 103
MsG0680032247.01.T01 MTR_6g039100 80.392 51 9 1 164 213 18 68 5.93e-24 95.1
MsG0680032247.01.T01 MTR_6g069560 35.616 219 115 7 4 215 717 916 1.08e-23 101
MsG0680032247.01.T01 MTR_6g072590 35.526 228 114 7 6 230 702 899 4.00e-23 100
MsG0680032247.01.T01 MTR_6g072310 31.925 213 139 4 9 218 693 902 9.80e-23 99.0
MsG0680032247.01.T01 MTR_6g072570 36.782 174 103 5 37 207 5 174 1.03e-22 96.3
MsG0680032247.01.T01 MTR_6g071935 31.925 213 139 4 9 218 674 883 1.12e-22 99.0
MsG0680032247.01.T01 MTR_6g072290 41.611 149 82 3 66 212 676 821 4.36e-22 97.1
MsG0680032247.01.T01 MTR_6g071925 42.446 139 75 3 76 212 592 727 6.46e-22 96.7
MsG0680032247.01.T01 MTR_6g478030 36.813 182 105 4 9 185 718 894 4.72e-21 94.0
MsG0680032247.01.T01 MTR_1g007300 32.692 208 133 5 9 213 711 914 6.38e-21 93.6
MsG0680032247.01.T01 MTR_6g074820 32.110 218 112 6 3 218 735 918 7.70e-21 93.2
MsG0680032247.01.T01 MTR_5g040440 37.419 155 92 2 4 153 475 629 3.73e-20 91.3
MsG0680032247.01.T01 MTR_6g478020 36.538 156 91 3 9 159 945 1097 4.67e-20 91.3
MsG0680032247.01.T01 MTR_6g072760 40.157 127 70 4 94 218 738 860 7.39e-20 90.5
MsG0680032247.01.T01 MTR_4g023260 29.004 231 148 5 4 224 720 944 1.60e-19 89.7
MsG0680032247.01.T01 MTR_6g083860 36.364 143 88 3 9 148 717 859 9.98e-19 87.0
MsG0680032247.01.T01 MTR_0012s0290 37.162 148 81 2 6 153 847 982 1.59e-18 86.7
MsG0680032247.01.T01 MTR_4g051738 31.925 213 127 9 9 213 694 896 4.74e-17 82.0
MsG0680032247.01.T01 MTR_6g471160 32.500 160 82 3 4 159 679 816 5.63e-17 81.6
MsG0680032247.01.T01 MTR_6g471160 32.317 164 85 3 4 163 524 665 5.65e-17 81.6
MsG0680032247.01.T01 MTR_4g051688 32.243 214 110 7 7 213 393 578 8.75e-17 81.3
MsG0680032247.01.T01 MTR_4g023060 27.928 222 152 4 4 219 705 924 1.35e-16 80.9
MsG0680032247.01.T01 MTR_6g072780 32.512 203 129 6 9 207 633 831 5.89e-16 78.6
MsG0680032247.01.T01 MTR_6g072780 32.843 204 128 7 9 207 633 832 6.71e-16 78.6
MsG0680032247.01.T01 MTR_4g023040 26.923 234 163 4 4 231 678 909 1.06e-15 78.2
MsG0680032247.01.T01 MTR_5g090940 26.336 262 153 9 4 234 726 978 3.21e-15 76.6
MsG0680032247.01.T01 MTR_6g074780 37.209 129 74 4 90 213 715 841 4.75e-15 76.3
MsG0680032247.01.T01 MTR_4g051682 35.570 149 88 4 69 213 669 813 5.74e-15 75.9
MsG0680032247.01.T01 MTR_6g072510 32.692 208 119 10 15 213 660 855 5.24e-14 72.8
MsG0680032247.01.T01 MTR_6g008140 35.099 151 78 4 3 153 625 755 1.76e-13 71.2
MsG0680032247.01.T01 MTR_6g008140 35.099 151 78 4 3 153 592 722 1.78e-13 71.2
MsG0680032247.01.T01 MTR_6g078890 46.316 95 47 3 119 212 956 1047 2.44e-13 70.9
MsG0680032247.01.T01 MTR_4g023220 27.103 214 141 5 5 212 309 513 2.84e-13 70.9
MsG0680032247.01.T01 MTR_4g051662 28.436 211 118 6 7 213 625 806 2.92e-13 70.9
MsG0680032247.01.T01 MTR_8g059550 29.861 144 76 1 5 148 66 184 1.37e-12 66.2
MsG0680032247.01.T01 MTR_6g074620 34.752 141 85 5 93 230 734 870 2.80e-12 67.8
MsG0680032247.01.T01 MTR_4g051698 31.959 194 101 6 7 198 712 876 3.09e-12 67.4
MsG0680032247.01.T01 MTR_2g012770 36.522 115 56 3 3 115 738 837 4.50e-11 63.9
MsG0680032247.01.T01 MTR_5g090870 32.164 171 103 5 6 168 588 753 5.01e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 67 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATAACAATGTTTGATTTAC+TGG 0.132439 6:+37286990 None:intergenic
AGTGGTTTATTATAAAATTA+AGG 0.144374 6:+37291896 MsG0680032247.01.T01:CDS
GCAACCTTCTAAATGAATTT+TGG 0.153411 6:-37287355 None:intergenic
GTCTTAAATTTAGGTCTTTC+AGG 0.170041 6:+37287207 MsG0680032247.01.T01:CDS
AAATTAAGGGAATGCTTAAT+TGG 0.198421 6:+37291910 MsG0680032247.01.T01:CDS
CACACTGGAATACGTCTTTC+TGG 0.235581 6:-37287757 None:intergenic
GCTTCAAAATCGGCTGATTT+TGG 0.242689 6:-37287168 None:intergenic
GCAGATAATGTTTCCAAGTT+TGG 0.246729 6:-37287408 None:intergenic
AGCTCAGTGGTCTTAAATTT+AGG 0.277453 6:+37287198 MsG0680032247.01.T01:CDS
ATGATGCATCAATTACTTTC+TGG 0.294873 6:+37287800 MsG0680032247.01.T01:CDS
CTAACCAAAATTCATTTAGA+AGG 0.327844 6:+37287351 MsG0680032247.01.T01:CDS
GTGGTTTATTATAAAATTAA+GGG 0.330262 6:+37291897 MsG0680032247.01.T01:CDS
ACACACATCTCTACTATGAT+AGG 0.334158 6:-37291871 None:intergenic
TGACATACTTTGACGCCTTT+AGG 0.347814 6:-37287474 None:intergenic
TAGAGGATTGACAAGGAATA+AGG 0.351848 6:+37288994 MsG0680032247.01.T01:CDS
TTAAGACCACTGAGCTCAAT+TGG 0.356728 6:-37287191 None:intergenic
GAACTTCATCAGTTAATTGC+TGG 0.371476 6:+37287126 MsG0680032247.01.T01:CDS
TCAGAAGATTTCCTTCGAAT+TGG 0.376733 6:+37287240 MsG0680032247.01.T01:CDS
CTCTGTCTTGTTGTTCGAGC+CGG 0.377171 6:+37287850 MsG0680032247.01.T01:CDS
CGCCTTTAGGAAGAAGTGTT+AGG 0.399182 6:-37287461 None:intergenic
GATCTAATTGTGCTGCTTTG+CGG 0.415942 6:+37291944 MsG0680032247.01.T01:CDS
TTGTGGTATTCCTCCAAACT+TGG 0.416442 6:+37287395 MsG0680032247.01.T01:CDS
GCAATTAACTGATGAAGTTC+CGG 0.420012 6:-37287123 None:intergenic
AATAAGGCTGTGGTTAATCT+AGG 0.423051 6:+37289010 MsG0680032247.01.T01:CDS
GACCTAACACTTCTTCCTAA+AGG 0.438616 6:+37287459 MsG0680032247.01.T01:CDS
AAACTGGCATGAACTCAGTT+TGG 0.441748 6:-37291801 None:intergenic
GCTCAATTGGGCTTCAAAAT+CGG 0.444351 6:-37287178 None:intergenic
TGCAAAGTGGTGCACATCCT+TGG 0.455408 6:+37287428 MsG0680032247.01.T01:CDS
CTTGAAAGAGTAGTACTGAT+TGG 0.459673 6:+37287060 MsG0680032247.01.T01:CDS
AACTTCATCAGTTAATTGCT+GGG 0.461119 6:+37287127 MsG0680032247.01.T01:CDS
GGAATGCTTAATTGGATTCG+TGG 0.471960 6:+37291918 MsG0680032247.01.T01:CDS
CATTGAAAGCTCAATAAGAC+GGG 0.482220 6:-37291836 None:intergenic
TAAGACCACTGAGCTCAATT+GGG 0.484273 6:-37287190 None:intergenic
CAGTACTACTCTTTCAAGTC+GGG 0.495016 6:-37287055 None:intergenic
GTGAGATTGTGAATTGTAAA+CGG 0.502244 6:-37287033 None:intergenic
TAACATTCTTTGATGCATGC+AGG 0.525290 6:-37287324 None:intergenic
GATAATGTTTCCAAGTTTGG+AGG 0.532587 6:-37287405 None:intergenic
TCCTCAAGAGTGTGAAAGAT+CGG 0.533357 6:+37291777 MsG0680032247.01.T01:CDS
TCCGATCTTTCACACTCTTG+AGG 0.536274 6:-37291778 None:intergenic
ACAAGACAGAGAGATATTGC+AGG 0.540260 6:-37287838 None:intergenic
TCAGTACTACTCTTTCAAGT+CGG 0.558120 6:-37287056 None:intergenic
CACACATCTCTACTATGATA+GGG 0.560936 6:-37291870 None:intergenic
CTAATTGTGCTGCTTTGCGG+AGG 0.569464 6:+37291947 MsG0680032247.01.T01:CDS
GCACGCGGAGGGTGGCAACA+AGG 0.586684 6:+37287723 MsG0680032247.01.T01:CDS
GTGTGGTTTGATCACCAAGT+TGG 0.592247 6:+37287775 MsG0680032247.01.T01:CDS
TATCAGAAACTGCACGCGGA+GGG 0.592825 6:+37287712 MsG0680032247.01.T01:intron
ATCTCTACTATGATAGGGTG+AGG 0.596595 6:-37291865 None:intergenic
TCATTGAAAGCTCAATAAGA+CGG 0.600332 6:-37291837 None:intergenic
ACTTTAGGGGCTGAAGCTAG+AGG 0.600732 6:+37288977 MsG0680032247.01.T01:intron
ATTGACAAGGAATAAGGCTG+TGG 0.602052 6:+37289000 MsG0680032247.01.T01:CDS
ACAAAGGCATACCAATTCGA+AGG 0.607713 6:-37287251 None:intergenic
TAGTAGAGATGTGTGTCAAG+TGG 0.615096 6:+37291878 MsG0680032247.01.T01:CDS
CAGAAACTGCACGCGGAGGG+TGG 0.615965 6:+37287715 MsG0680032247.01.T01:intron
ACTTCATCAGTTAATTGCTG+GGG 0.634531 6:+37287128 MsG0680032247.01.T01:CDS
TGAAGCCCAATTGAGCTCAG+TGG 0.639207 6:+37287185 MsG0680032247.01.T01:CDS
CAAGACAGAGAGATATTGCA+GGG 0.653616 6:-37287837 None:intergenic
TGTTAGGTCTAAATTTACCA+AGG 0.653706 6:-37287445 None:intergenic
TCTTTCACGTTAGAAAACAA+AGG 0.654005 6:-37287267 None:intergenic
ACTTGGTGATCAAACCACAC+TGG 0.655886 6:-37287772 None:intergenic
TGGAAACATTATCTGCAAAG+TGG 0.656613 6:+37287415 MsG0680032247.01.T01:CDS
TTATCAGAAACTGCACGCGG+AGG 0.664344 6:+37287711 MsG0680032247.01.T01:intron
AGAGTAGTACTGATTGGTTG+TGG 0.668889 6:+37287066 MsG0680032247.01.T01:CDS
CTGAAGCTAGAGGATTGACA+AGG 0.673324 6:+37288987 MsG0680032247.01.T01:CDS
CAGAAAGACGTATTCCAGTG+TGG 0.689966 6:+37287758 MsG0680032247.01.T01:CDS
TTGATGCATCATGACCAACT+TGG 0.717161 6:-37287789 None:intergenic
GAAGGAAATCTTCTGATACG+TGG 0.746978 6:-37287233 None:intergenic
ATATTATCAGAAACTGCACG+CGG 0.797057 6:+37287708 MsG0680032247.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGAAAATTTATCAAAAAT+AGG - Chr6:37291097-37291116 None:intergenic 10.0%
!! TTAGTAAAAATAATCAAAAT+GGG - Chr6:37290142-37290161 None:intergenic 10.0%
!! TTTAGTAAAAATAATCAAAA+TGG - Chr6:37290143-37290162 None:intergenic 10.0%
!!! AGATATTTTTTTTTTATAAG+TGG + Chr6:37288735-37288754 MsG0680032247.01.T01:intron 10.0%
!!! TTTTGATTATTTTTACTAAA+TGG + Chr6:37290143-37290162 MsG0680032247.01.T01:intron 10.0%
!! AAAAATCTCAAAAAAATTTG+TGG + Chr6:37287378-37287397 MsG0680032247.01.T01:CDS 15.0%
!! AAATAAAAACAATTCCAATT+CGG - Chr6:37290787-37290806 None:intergenic 15.0%
!! AGTGGTTTATTATAAAATTA+AGG + Chr6:37291896-37291915 MsG0680032247.01.T01:CDS 15.0%
!! CTGTAAAAATATAAGAAAAA+GGG - Chr6:37290466-37290485 None:intergenic 15.0%
!! GTGGTTTATTATAAAATTAA+GGG + Chr6:37291897-37291916 MsG0680032247.01.T01:CDS 15.0%
!! TAAAAAAAAAATATCTTGAG+AGG - Chr6:37288731-37288750 None:intergenic 15.0%
!! TCTGTAAAAATATAAGAAAA+AGG - Chr6:37290467-37290486 None:intergenic 15.0%
!! TGTAAAAATATAAGAAAAAG+GGG - Chr6:37290465-37290484 None:intergenic 15.0%
!!! AAACTTTTCATTGATAAAAT+AGG + Chr6:37288090-37288109 MsG0680032247.01.T01:intron 15.0%
!!! GAAATATTCTTATTTGATTT+TGG + Chr6:37290305-37290324 MsG0680032247.01.T01:intron 15.0%
!!! GTTAAAGTGTTTTATAAAAT+GGG + Chr6:37289663-37289682 MsG0680032247.01.T01:intron 15.0%
!!! TGTTAAAGTGTTTTATAAAA+TGG + Chr6:37289662-37289681 MsG0680032247.01.T01:intron 15.0%
!!! TTAAAGTGTTTTATAAAATG+GGG + Chr6:37289664-37289683 MsG0680032247.01.T01:intron 15.0%
!! AAAAATGTTAATTGAGATAC+TGG + Chr6:37290659-37290678 MsG0680032247.01.T01:intron 20.0%
!! AATAATTTCTTCATATGAAC+CGG - Chr6:37287872-37287891 None:intergenic 20.0%
!! AATTTATCAAAAATAGGACT+AGG - Chr6:37291091-37291110 None:intergenic 20.0%
!! ATTCAAACAAGAAATTAACA+TGG + Chr6:37288122-37288141 MsG0680032247.01.T01:intron 20.0%
!! GAGAAGAGTTAATTATTTAA+TGG + Chr6:37288592-37288611 MsG0680032247.01.T01:intron 20.0%
!! TGAATTATTATTGCTAATAG+TGG + Chr6:37289056-37289075 MsG0680032247.01.T01:intron 20.0%
!! TGACTTAAAGAAAATGATAA+AGG + Chr6:37291241-37291260 MsG0680032247.01.T01:intron 20.0%
!! TGGATTAATAGAATGTTATA+CGG + Chr6:37290325-37290344 MsG0680032247.01.T01:intron 20.0%
!!! AAATTTTCTTTCATTTAGTG+AGG + Chr6:37291106-37291125 MsG0680032247.01.T01:intron 20.0%
!!! AATTTTCTTTCATTTAGTGA+GGG + Chr6:37291107-37291126 MsG0680032247.01.T01:intron 20.0%
!!! ATAAAACAGGTTTTTAAAAC+AGG + Chr6:37290685-37290704 MsG0680032247.01.T01:intron 20.0%
!!! ATGAGATTTTTTTAAGAGAA+GGG + Chr6:37288688-37288707 MsG0680032247.01.T01:intron 20.0%
!!! TTTTGAGAAACTTAATTACT+CGG + Chr6:37290374-37290393 MsG0680032247.01.T01:intron 20.0%
! AAATTAAGGGAATGCTTAAT+TGG + Chr6:37291910-37291929 MsG0680032247.01.T01:CDS 25.0%
! AAGACAAGAAAAATATTCGA+AGG - Chr6:37289697-37289716 None:intergenic 25.0%
! ACAATAATCTCTATCATCAT+TGG - Chr6:37291346-37291365 None:intergenic 25.0%
! AGTAGACATATAAAAGGTAA+AGG - Chr6:37291515-37291534 None:intergenic 25.0%
! AGTGTAAAACATCTTCAATT+AGG - Chr6:37290009-37290028 None:intergenic 25.0%
! AGTTGTCTATAATAGATACA+AGG - Chr6:37288467-37288486 None:intergenic 25.0%
! ATGATGATAGAGATTATTGT+TGG + Chr6:37291346-37291365 MsG0680032247.01.T01:intron 25.0%
! ATTATGATGCTCTCATTTAA+AGG + Chr6:37291586-37291605 MsG0680032247.01.T01:intron 25.0%
! CTAACCAAAATTCATTTAGA+AGG + Chr6:37287351-37287370 MsG0680032247.01.T01:CDS 25.0%
! CTTCTCTTAAAAAAATCTCA+TGG - Chr6:37288689-37288708 None:intergenic 25.0%
! CTTGAAAAGTTGAATTTACA+GGG + Chr6:37290716-37290735 MsG0680032247.01.T01:intron 25.0%
! GAAATTTGTGTCTAAATTGA+AGG - Chr6:37289211-37289230 None:intergenic 25.0%
! TAAAGTCGATGATATTATTG+TGG + Chr6:37289727-37289746 MsG0680032247.01.T01:intron 25.0%
! TAAAGTTTGTAAAATTCTGC+TGG + Chr6:37289269-37289288 MsG0680032247.01.T01:intron 25.0%
! TAAATAATAGAAATAGCGGT+CGG - Chr6:37288316-37288335 None:intergenic 25.0%
! TAATTCATCCATAACATATC+TGG - Chr6:37288250-37288269 None:intergenic 25.0%
! TAGTTTGATATATTTACACG+TGG + Chr6:37291665-37291684 MsG0680032247.01.T01:intron 25.0%
! TCTTGAAAAGTTGAATTTAC+AGG + Chr6:37290715-37290734 MsG0680032247.01.T01:intron 25.0%
! TGGAATCTTCAATAAATTAG+AGG + Chr6:37287528-37287547 MsG0680032247.01.T01:intron 25.0%
! TGGATATAATGACTTATTGA+CGG + Chr6:37291542-37291561 MsG0680032247.01.T01:intron 25.0%
! TTAATCTAGGTAAGGTTAAA+TGG + Chr6:37289023-37289042 MsG0680032247.01.T01:intron 25.0%
! TTGAAAAGTTGAATTTACAG+GGG + Chr6:37290717-37290736 MsG0680032247.01.T01:intron 25.0%
! TTTGAGAAACTTAATTACTC+GGG + Chr6:37290375-37290394 MsG0680032247.01.T01:intron 25.0%
!! AGAGTTTATCTATGATTTGT+AGG + Chr6:37289759-37289778 MsG0680032247.01.T01:intron 25.0%
!! ATAATATAAGTTGGAAGGTA+TGG + Chr6:37291634-37291653 MsG0680032247.01.T01:intron 25.0%
!! ATTTGATATTTTACGAAGCA+TGG + Chr6:37289823-37289842 MsG0680032247.01.T01:intron 25.0%
!! ATTTTATCTTTCGGAAAATC+TGG - Chr6:37288168-37288187 None:intergenic 25.0%
!! CCAATCTTATGATTTCTTTT+GGG + Chr6:37291037-37291056 MsG0680032247.01.T01:intron 25.0%
!! CGATTCTTGATATTTCTTTT+TGG + Chr6:37288350-37288369 MsG0680032247.01.T01:intron 25.0%
!! CTGATTCCAATTTTATCTTT+CGG - Chr6:37288177-37288196 None:intergenic 25.0%
!! GATTTTCCGAAAGATAAAAT+TGG + Chr6:37288168-37288187 MsG0680032247.01.T01:intron 25.0%
!! TCCAATCTTATGATTTCTTT+TGG + Chr6:37291036-37291055 MsG0680032247.01.T01:intron 25.0%
!! TTACCTTTTATATGTCTACT+AGG + Chr6:37291515-37291534 MsG0680032247.01.T01:intron 25.0%
!! TTGACATAATATAAGTTGGA+AGG + Chr6:37291629-37291648 MsG0680032247.01.T01:intron 25.0%
!!! AAGACTTTTGCTATGATTTT+CGG + Chr6:37290223-37290242 MsG0680032247.01.T01:intron 25.0%
!!! ACCGCTATTTCTATTATTTA+GGG + Chr6:37288316-37288335 MsG0680032247.01.T01:intron 25.0%
!!! AGTATCGGTTATTTTATCTT+TGG + Chr6:37288561-37288580 MsG0680032247.01.T01:intron 25.0%
!!! ATGTTGTTTTCGAAAACAAA+TGG + Chr6:37288031-37288050 MsG0680032247.01.T01:intron 25.0%
!!! CAATGAAAAGTTTGTTTTTG+AGG - Chr6:37288083-37288102 None:intergenic 25.0%
!!! CATGAGATTTTTTTAAGAGA+AGG + Chr6:37288687-37288706 MsG0680032247.01.T01:intron 25.0%
!!! GAAAGTTATTACTGTTTTAG+TGG - Chr6:37289324-37289343 None:intergenic 25.0%
!!! TCGTTTTTTTTAGAAAGTGT+TGG + Chr6:37291745-37291764 MsG0680032247.01.T01:intron 25.0%
!!! TGAGATTTTTTTAAGAGAAG+GGG + Chr6:37288689-37288708 MsG0680032247.01.T01:intron 25.0%
AAAAAGCTATTAGCACTCTA+TGG + Chr6:37290998-37291017 MsG0680032247.01.T01:intron 30.0%
AACTTCATCAGTTAATTGCT+GGG + Chr6:37287127-37287146 MsG0680032247.01.T01:CDS 30.0%
AAGGAAATGAATAGGAATGA+AGG - Chr6:37288841-37288860 None:intergenic 30.0%
ACACCTAGTAGACATATAAA+AGG - Chr6:37291521-37291540 None:intergenic 30.0%
AGGAAATGAATAGGAATGAA+GGG - Chr6:37288840-37288859 None:intergenic 30.0%
ATAACATATCTGGCATTCAT+AGG - Chr6:37288240-37288259 None:intergenic 30.0%
ATGATCCTAGAATTATCTAG+AGG + Chr6:37288765-37288784 MsG0680032247.01.T01:intron 30.0%
ATGATGCATCAATTACTTTC+TGG + Chr6:37287800-37287819 MsG0680032247.01.T01:CDS 30.0%
ATTGTTGGACAATAACAACA+TGG + Chr6:37291400-37291419 MsG0680032247.01.T01:intron 30.0%
CAAACAAGAAATTAACATGG+AGG + Chr6:37288125-37288144 MsG0680032247.01.T01:intron 30.0%
CCCAAAAGAAATCATAAGAT+TGG - Chr6:37291040-37291059 None:intergenic 30.0%
CCCCTAAATAATAGAAATAG+CGG - Chr6:37288320-37288339 None:intergenic 30.0%
CCTAATTGAAATCACATACT+AGG - Chr6:37289905-37289924 None:intergenic 30.0%
CCTAGTATGTGATTTCAATT+AGG + Chr6:37289902-37289921 MsG0680032247.01.T01:intron 30.0%
CGCATGTAAAATTTCAGTAT+CGG + Chr6:37288546-37288565 MsG0680032247.01.T01:intron 30.0%
CTAGAGCTAAATTTCGAAAA+CGG + Chr6:37287934-37287953 MsG0680032247.01.T01:intron 30.0%
CTCATTTAAAGGTGGATATA+AGG + Chr6:37291597-37291616 MsG0680032247.01.T01:intron 30.0%
GACACAAATTTCGTATGATT+CGG + Chr6:37289219-37289238 MsG0680032247.01.T01:intron 30.0%
GGAATCAGTTTATTCAAACA+AGG + Chr6:37288189-37288208 MsG0680032247.01.T01:intron 30.0%
GGAGTTGACATAATATAAGT+TGG + Chr6:37291625-37291644 MsG0680032247.01.T01:intron 30.0%
GTCTTAAATTTAGGTCTTTC+AGG + Chr6:37287207-37287226 MsG0680032247.01.T01:CDS 30.0%
GTGAGATTGTGAATTGTAAA+CGG - Chr6:37287036-37287055 None:intergenic 30.0%
GTTTGTCAAGATGAATCAAT+AGG + Chr6:37290811-37290830 MsG0680032247.01.T01:intron 30.0%
TAACAACCATATTCCATTCT+GGG - Chr6:37289163-37289182 None:intergenic 30.0%
TAAGTCATAAAGACTTAGTC+AGG - Chr6:37290442-37290461 None:intergenic 30.0%
TAGGCAAAGGATTACAAATT+GGG + Chr6:37289778-37289797 MsG0680032247.01.T01:intron 30.0%
TATGAATGCCAGATATGTTA+TGG + Chr6:37288239-37288258 MsG0680032247.01.T01:intron 30.0%
TATTGAAGTGAAAACCGAAT+TGG + Chr6:37290770-37290789 MsG0680032247.01.T01:intron 30.0%
TCATTGAAAGCTCAATAAGA+CGG - Chr6:37291840-37291859 None:intergenic 30.0%
TCTATTATTTAGGGGAGTTT+GGG + Chr6:37288325-37288344 MsG0680032247.01.T01:intron 30.0%
TCTTTCACGTTAGAAAACAA+AGG - Chr6:37287270-37287289 None:intergenic 30.0%
TGTAAAATTCTGCTGGAATT+TGG + Chr6:37289276-37289295 MsG0680032247.01.T01:intron 30.0%
TGTTAGGTCTAAATTTACCA+AGG - Chr6:37287448-37287467 None:intergenic 30.0%
TTAACAACCATATTCCATTC+TGG - Chr6:37289164-37289183 None:intergenic 30.0%
TTCTATTATTTAGGGGAGTT+TGG + Chr6:37288324-37288343 MsG0680032247.01.T01:intron 30.0%
TTTCTCCTCTAGATAATTCT+AGG - Chr6:37288773-37288792 None:intergenic 30.0%
! AAGTATTGTGTTGGACTTTA+GGG + Chr6:37288963-37288982 MsG0680032247.01.T01:intron 30.0%
! ATACTGAAATTTTACATGCG+GGG - Chr6:37288546-37288565 None:intergenic 30.0%
! CCTATTTGACTAAGGTTTTA+CGG - Chr6:37291196-37291215 None:intergenic 30.0%
! CGATACTGAAATTTTACATG+CGG - Chr6:37288548-37288567 None:intergenic 30.0%
! GATACTGAAATTTTACATGC+GGG - Chr6:37288547-37288566 None:intergenic 30.0%
! GCAACCTTCTAAATGAATTT+TGG - Chr6:37287358-37287377 None:intergenic 30.0%
! GTAAACGGAAGTTCTTTTAT+CGG - Chr6:37287021-37287040 None:intergenic 30.0%
! TATCTATGATTTGTAGGCAA+AGG + Chr6:37289765-37289784 MsG0680032247.01.T01:intron 30.0%
! TCTAGATGAACTTTTCTTGT+GGG - Chr6:37291453-37291472 None:intergenic 30.0%
! TTCGGCGATATATTTTCTAA+AGG + Chr6:37290241-37290260 MsG0680032247.01.T01:intron 30.0%
!! AAAGTATTGTGTTGGACTTT+AGG + Chr6:37288962-37288981 MsG0680032247.01.T01:intron 30.0%
!! AATGCTCAAAAGTATTGTGT+TGG + Chr6:37288954-37288973 MsG0680032247.01.T01:intron 30.0%
!! CCGCTATTTCTATTATTTAG+GGG + Chr6:37288317-37288336 MsG0680032247.01.T01:intron 30.0%
!! GAATTGATTCATGTGAGTTT+TGG + Chr6:37288931-37288950 MsG0680032247.01.T01:intron 30.0%
!! GACCGCTATTTCTATTATTT+AGG + Chr6:37288315-37288334 MsG0680032247.01.T01:intron 30.0%
!! TGCTTGAGTTTTATGAGATT+GGG + Chr6:37289082-37289101 MsG0680032247.01.T01:intron 30.0%
!!! AGATCTATCAGTGTCATTTT+TGG + Chr6:37290525-37290544 MsG0680032247.01.T01:intron 30.0%
!!! ATTTTTTGTGTCTGTTGTCT+TGG + Chr6:37288274-37288293 MsG0680032247.01.T01:intron 30.0%
!!! TCAAAGTATGTCACTTTTTG+CGG + Chr6:37287484-37287503 MsG0680032247.01.T01:intron 30.0%
!!! TGGAGACAATTTTGAAGTAT+GGG + Chr6:37289447-37289466 MsG0680032247.01.T01:intron 30.0%
AAAGGTGGATATAAGGATGA+GGG + Chr6:37291604-37291623 MsG0680032247.01.T01:intron 35.0%
AACAATCATCACCAACTAGA+AGG - Chr6:37290415-37290434 None:intergenic 35.0%
AATAAGGCTGTGGTTAATCT+AGG + Chr6:37289010-37289029 MsG0680032247.01.T01:CDS 35.0%
AATAGCTGCAGATACATCAA+TGG - Chr6:37290597-37290616 None:intergenic 35.0%
AATGACGACCTATTTGACTA+AGG - Chr6:37291204-37291223 None:intergenic 35.0%
ACAACATCTGTGGAATCTAA+TGG - Chr6:37288018-37288037 None:intergenic 35.0%
ACAAGTAGGATAACCTTTGT+TGG + Chr6:37291691-37291710 MsG0680032247.01.T01:intron 35.0%
ACAATCATCACCAACTAGAA+GGG - Chr6:37290414-37290433 None:intergenic 35.0%
ACACACATCTCTACTATGAT+AGG - Chr6:37291874-37291893 None:intergenic 35.0%
ACTTCATCAGTTAATTGCTG+GGG + Chr6:37287128-37287147 MsG0680032247.01.T01:CDS 35.0%
AGCCCAGATTTATCATCAAT+GGG + Chr6:37287893-37287912 MsG0680032247.01.T01:intron 35.0%
AGGTTCTCATTGAGATTTCT+TGG + Chr6:37289497-37289516 MsG0680032247.01.T01:intron 35.0%
AGTATTGTGTTGGACTTTAG+GGG + Chr6:37288964-37288983 MsG0680032247.01.T01:intron 35.0%
ATATTATCAGAAACTGCACG+CGG + Chr6:37287708-37287727 MsG0680032247.01.T01:intron 35.0%
ATCTTTCGGAAAATCTGGAT+TGG - Chr6:37288163-37288182 None:intergenic 35.0%
ATGAATAGGAATGAAGGGTT+TGG - Chr6:37288835-37288854 None:intergenic 35.0%
ATGATGCTCTCATTTAAAGG+TGG + Chr6:37291589-37291608 MsG0680032247.01.T01:intron 35.0%
ATTCTGCTGGAATTTGGTTA+CGG + Chr6:37289282-37289301 MsG0680032247.01.T01:intron 35.0%
CAAGTAGGATAACCTTTGTT+GGG + Chr6:37291692-37291711 MsG0680032247.01.T01:intron 35.0%
CACACATCTCTACTATGATA+GGG - Chr6:37291873-37291892 None:intergenic 35.0%
CAGCTATTAAGACCTACAAA+CGG - Chr6:37290916-37290935 None:intergenic 35.0%
CAGTACATCTGCAAACTATA+TGG - Chr6:37288387-37288406 None:intergenic 35.0%
CATTGAAAGCTCAATAAGAC+GGG - Chr6:37291839-37291858 None:intergenic 35.0%
CCGTAAAACCTTAGTCAAAT+AGG + Chr6:37291193-37291212 MsG0680032247.01.T01:intron 35.0%
CGAAAACAAATGGAATTGTG+TGG + Chr6:37288041-37288060 MsG0680032247.01.T01:intron 35.0%
CTAATTTCGGTTCAGTATTG+AGG + Chr6:37289422-37289441 MsG0680032247.01.T01:intron 35.0%
CTAGTGGAGATCTTGTTAAT+GGG - Chr6:37291138-37291157 None:intergenic 35.0%
GAACTTCATCAGTTAATTGC+TGG + Chr6:37287126-37287145 MsG0680032247.01.T01:CDS 35.0%
GAGATACTGGATGATAAAAC+AGG + Chr6:37290672-37290691 MsG0680032247.01.T01:intron 35.0%
GATAATGTTTCCAAGTTTGG+AGG - Chr6:37287408-37287427 None:intergenic 35.0%
GCAATTAACTGATGAAGTTC+CGG - Chr6:37287126-37287145 None:intergenic 35.0%
GCAGACAAAGATCTTATGTT+GGG - Chr6:37287561-37287580 None:intergenic 35.0%
GCAGATAATGTTTCCAAGTT+TGG - Chr6:37287411-37287430 None:intergenic 35.0%
GGATTTCTTCGTATTTCTCT+AGG - Chr6:37291325-37291344 None:intergenic 35.0%
GGCATCACAAAAATACTACT+CGG - Chr6:37287105-37287124 None:intergenic 35.0%
GTAAACATATCTCTTAGCTG+AGG - Chr6:37288443-37288462 None:intergenic 35.0%
GTAGGCAAAGGATTACAAAT+TGG + Chr6:37289777-37289796 MsG0680032247.01.T01:intron 35.0%
GTGAAGGAAAGGAAATGAAT+AGG - Chr6:37288849-37288868 None:intergenic 35.0%
TAAAGGTGGATATAAGGATG+AGG + Chr6:37291603-37291622 MsG0680032247.01.T01:intron 35.0%
TAACAAGATCTCCACTAGAA+GGG + Chr6:37291140-37291159 MsG0680032247.01.T01:intron 35.0%
TAACATTCTTTGATGCATGC+AGG - Chr6:37287327-37287346 None:intergenic 35.0%
TACAGCAGAAAGTTAAGGAA+AGG - Chr6:37287593-37287612 None:intergenic 35.0%
TACATCTGCAAACTATATGG+AGG - Chr6:37288384-37288403 None:intergenic 35.0%
TAGAGGATTGACAAGGAATA+AGG + Chr6:37288994-37289013 MsG0680032247.01.T01:CDS 35.0%
TATTCGTATGACAGTACTTG+TGG + Chr6:37289109-37289128 MsG0680032247.01.T01:intron 35.0%
TCAGAAGATTTCCTTCGAAT+TGG + Chr6:37287240-37287259 MsG0680032247.01.T01:CDS 35.0%
TCATATGCTAACAGAAGTGA+AGG - Chr6:37288865-37288884 None:intergenic 35.0%
TCTAGTGGAGATCTTGTTAA+TGG - Chr6:37291139-37291158 None:intergenic 35.0%
TCTGTTAGCATATGAGAGAA+AGG + Chr6:37288870-37288889 MsG0680032247.01.T01:intron 35.0%
TGAACCGAAATTAGTGAAAC+CGG - Chr6:37289416-37289435 None:intergenic 35.0%
TGAATAGGAATGAAGGGTTT+GGG - Chr6:37288834-37288853 None:intergenic 35.0%
TGCAGACAAAGATCTTATGT+TGG - Chr6:37287562-37287581 None:intergenic 35.0%
TGGAAACATTATCTGCAAAG+TGG + Chr6:37287415-37287434 MsG0680032247.01.T01:CDS 35.0%
TGTAGGAGTAATTAATGTCG+AGG + Chr6:37291297-37291316 MsG0680032247.01.T01:intron 35.0%
TTAACAAGATCTCCACTAGA+AGG + Chr6:37291139-37291158 MsG0680032247.01.T01:intron 35.0%
TTATATGTCTACTAGGTGTG+TGG + Chr6:37291522-37291541 MsG0680032247.01.T01:intron 35.0%
TTCATCTAGAGAGATCAATG+TGG + Chr6:37291463-37291482 MsG0680032247.01.T01:intron 35.0%
TTGATGTATCTGCAGCTATT+TGG + Chr6:37290597-37290616 MsG0680032247.01.T01:intron 35.0%
TTGGCTTACAAGGAATACAA+TGG + Chr6:37291365-37291384 MsG0680032247.01.T01:intron 35.0%
TTTACACGTGGAAAACAAGT+AGG + Chr6:37291677-37291696 MsG0680032247.01.T01:intron 35.0%
! ACTCCCATTGATGATAAATC+TGG - Chr6:37287899-37287918 None:intergenic 35.0%
! AGCTCAGTGGTCTTAAATTT+AGG + Chr6:37287198-37287217 MsG0680032247.01.T01:CDS 35.0%
! CTCCCATTGATGATAAATCT+GGG - Chr6:37287898-37287917 None:intergenic 35.0%
! CTCTAGATGAACTTTTCTTG+TGG - Chr6:37291454-37291473 None:intergenic 35.0%
! CTTTTTGCGGACACTTATTT+TGG + Chr6:37287497-37287516 MsG0680032247.01.T01:intron 35.0%
! GTTTTCGAAAACAACATCTG+TGG - Chr6:37288028-37288047 None:intergenic 35.0%
! TAACAAAATTGCCGACGTTT+TGG + Chr6:37289388-37289407 MsG0680032247.01.T01:intron 35.0%
! TCAGTACTACTCTTTCAAGT+CGG - Chr6:37287059-37287078 None:intergenic 35.0%
! TGGCTTGTGTAACAAATTGT+TGG + Chr6:37291385-37291404 MsG0680032247.01.T01:intron 35.0%
! TTGACTAAGGTTTTACGGTT+AGG - Chr6:37291191-37291210 None:intergenic 35.0%
! TTTCTCCTTCTTTTCCACTT+TGG + Chr6:37288803-37288822 MsG0680032247.01.T01:intron 35.0%
!! CTTGAAAGAGTAGTACTGAT+TGG + Chr6:37287060-37287079 MsG0680032247.01.T01:CDS 35.0%
!! GAAAATCTGGATTGGTGAAT+CGG - Chr6:37288155-37288174 None:intergenic 35.0%
!! GAGATTATTGTTGGCTTACA+AGG + Chr6:37291355-37291374 MsG0680032247.01.T01:intron 35.0%
!! GAGTAGTATTTTTGTGATGC+CGG + Chr6:37287104-37287123 MsG0680032247.01.T01:CDS 35.0%
!! GTGCTTGAGTTTTATGAGAT+TGG + Chr6:37289081-37289100 MsG0680032247.01.T01:intron 35.0%
!! TTTTAAGAGAAGGGGCAAAA+TGG + Chr6:37288697-37288716 MsG0680032247.01.T01:intron 35.0%
!!! CACTTATTTTGGATAACTGC+TGG + Chr6:37287508-37287527 MsG0680032247.01.T01:intron 35.0%
!!! CTATCAGTGTCATTTTTGGT+AGG + Chr6:37290529-37290548 MsG0680032247.01.T01:intron 35.0%
!!! CTGGAGACAATTTTGAAGTA+TGG + Chr6:37289446-37289465 MsG0680032247.01.T01:intron 35.0%
AAACTGGCATGAACTCAGTT+TGG - Chr6:37291804-37291823 None:intergenic 40.0%
ACAAGACAGAGAGATATTGC+AGG - Chr6:37287841-37287860 None:intergenic 40.0%
ACGAAACCCAGAATGGAATA+TGG + Chr6:37289154-37289173 MsG0680032247.01.T01:intron 40.0%
AGAAAGAGAATCCATCCAAG+AGG - Chr6:37290556-37290575 None:intergenic 40.0%
AGATGAATCAATAGGCTTGC+CGG + Chr6:37290819-37290838 MsG0680032247.01.T01:intron 40.0%
AGTCAAATAGGTCGTCATTC+AGG + Chr6:37291205-37291224 MsG0680032247.01.T01:intron 40.0%
ATCTCCACTAGAAGGGAAAT+TGG + Chr6:37291147-37291166 MsG0680032247.01.T01:intron 40.0%
ATCTCTACTATGATAGGGTG+AGG - Chr6:37291868-37291887 None:intergenic 40.0%
ATGTGTGTTTCCCTTCTAGT+TGG + Chr6:37290401-37290420 MsG0680032247.01.T01:intron 40.0%
ATTGACAAGGAATAAGGCTG+TGG + Chr6:37289000-37289019 MsG0680032247.01.T01:CDS 40.0%
ATTTCTTGGAGATATGACGC+CGG + Chr6:37289511-37289530 MsG0680032247.01.T01:intron 40.0%
CAAGACAGAGAGATATTGCA+GGG - Chr6:37287840-37287859 None:intergenic 40.0%
CAGCCCAGATTTATCATCAA+TGG + Chr6:37287892-37287911 MsG0680032247.01.T01:intron 40.0%
CCCAAAACATTAATCGTGAC+CGG - Chr6:37290868-37290887 None:intergenic 40.0%
GAAAAGAGCTATCCGTTAGA+TGG + Chr6:37290045-37290064 MsG0680032247.01.T01:intron 40.0%
GAAAGAGAATCCATCCAAGA+GGG - Chr6:37290555-37290574 None:intergenic 40.0%
GAAGGAAATCTTCTGATACG+TGG - Chr6:37287236-37287255 None:intergenic 40.0%
GACAAAGATCTTATGTTGGG+TGG - Chr6:37287558-37287577 None:intergenic 40.0%
GACCTAACACTTCTTCCTAA+AGG + Chr6:37287459-37287478 MsG0680032247.01.T01:CDS 40.0%
GACTTATTGACGGTCAAGAT+AGG + Chr6:37291552-37291571 MsG0680032247.01.T01:intron 40.0%
GAGCTAAATTTCGAAAACGG+TGG + Chr6:37287937-37287956 MsG0680032247.01.T01:intron 40.0%
GATTCGGATCAGAAACGAAT+TGG + Chr6:37289235-37289254 MsG0680032247.01.T01:intron 40.0%
GCAGAATTGGTGCAAAATTC+AGG + Chr6:37289477-37289496 MsG0680032247.01.T01:intron 40.0%
GCTCAATTGGGCTTCAAAAT+CGG - Chr6:37287181-37287200 None:intergenic 40.0%
GCTTCTACAGCAGAAAGTTA+AGG - Chr6:37287598-37287617 None:intergenic 40.0%
GGAATGCTTAATTGGATTCG+TGG + Chr6:37291918-37291937 MsG0680032247.01.T01:CDS 40.0%
TAAGACCACTGAGCTCAATT+GGG - Chr6:37287193-37287212 None:intergenic 40.0%
TAATAGCTGCAGACATAGAG+TGG + Chr6:37290927-37290946 MsG0680032247.01.T01:intron 40.0%
TAGTAGAGATGTGTGTCAAG+TGG + Chr6:37291878-37291897 MsG0680032247.01.T01:CDS 40.0%
TGACATACTTTGACGCCTTT+AGG - Chr6:37287477-37287496 None:intergenic 40.0%
TGCTAACAGAAGTGAAGGAA+AGG - Chr6:37288860-37288879 None:intergenic 40.0%
TGCTAATGAATTGTGAACCG+CGG + Chr6:37290961-37290980 MsG0680032247.01.T01:intron 40.0%
TGTGTCTGTTGTCTTGGAAT+TGG + Chr6:37288280-37288299 MsG0680032247.01.T01:intron 40.0%
TGTTGTCTTGGAATTGGCAT+AGG + Chr6:37288286-37288305 MsG0680032247.01.T01:intron 40.0%
TTAAGACCACTGAGCTCAAT+TGG - Chr6:37287194-37287213 None:intergenic 40.0%
TTCACATACTTCATCAGGAG+TGG + Chr6:37289538-37289557 MsG0680032247.01.T01:intron 40.0%
TTCTGCTGGAATTTGGTTAC+GGG + Chr6:37289283-37289302 MsG0680032247.01.T01:intron 40.0%
TTGATGCATCATGACCAACT+TGG - Chr6:37287792-37287811 None:intergenic 40.0%
TTGGGATTTGATTGTGTGCT+TGG + Chr6:37289796-37289815 MsG0680032247.01.T01:intron 40.0%
TTGTGGTATTCCTCCAAACT+TGG + Chr6:37287395-37287414 MsG0680032247.01.T01:CDS 40.0%
TTTCACCCCTTTACGACATT+GGG + Chr6:37290278-37290297 MsG0680032247.01.T01:intron 40.0%
! ACAAAGGCATACCAATTCGA+AGG - Chr6:37287254-37287273 None:intergenic 40.0%
! CAGTACTACTCTTTCAAGTC+GGG - Chr6:37287058-37287077 None:intergenic 40.0%
! CCGGTCACGATTAATGTTTT+GGG + Chr6:37290865-37290884 MsG0680032247.01.T01:intron 40.0%
! TCCTCAAGAGTGTGAAAGAT+CGG + Chr6:37291777-37291796 MsG0680032247.01.T01:CDS 40.0%
! TTTTCACCCCTTTACGACAT+TGG + Chr6:37290277-37290296 MsG0680032247.01.T01:intron 40.0%
! TTTTGCAACGAAACCCAGAA+TGG + Chr6:37289147-37289166 MsG0680032247.01.T01:intron 40.0%
!! AGAGTAGTACTGATTGGTTG+TGG + Chr6:37287066-37287085 MsG0680032247.01.T01:CDS 40.0%
!! GATCTAATTGTGCTGCTTTG+CGG + Chr6:37291944-37291963 MsG0680032247.01.T01:CDS 40.0%
!! GCTTCAAAATCGGCTGATTT+TGG - Chr6:37287171-37287190 None:intergenic 40.0%
!! GGTTAGGCTTTAAATTCGCA+AGG - Chr6:37291175-37291194 None:intergenic 40.0%
!! TGCTGTAGAAGCATTTAACG+AGG + Chr6:37287606-37287625 MsG0680032247.01.T01:intron 40.0%
!!! CGGGTTTTGTACTCTAAAAC+TGG - Chr6:37291820-37291839 None:intergenic 40.0%
ACTTCATCAGGAGTGGTTAG+AGG + Chr6:37289545-37289564 MsG0680032247.01.T01:intron 45.0%
ATCACATACTAGGTGCACCT+AGG - Chr6:37289895-37289914 None:intergenic 45.0%
ATTGCGTAGAAGCTTCTAGC+AGG + Chr6:37290497-37290516 MsG0680032247.01.T01:intron 45.0%
CACACTGGAATACGTCTTTC+TGG - Chr6:37287760-37287779 None:intergenic 45.0%
CAGAAAGACGTATTCCAGTG+TGG + Chr6:37287758-37287777 MsG0680032247.01.T01:CDS 45.0%
CGAACTAGAACATTCTAGCC+CGG - Chr6:37290841-37290860 None:intergenic 45.0%
CTAATGGTGGCCATTCCATA+GGG - Chr6:37289955-37289974 None:intergenic 45.0%
CTAATGGTGGCCTTTCCATA+GGG - Chr6:37290077-37290096 None:intergenic 45.0%
CTGAAGCTAGAGGATTGACA+AGG + Chr6:37288987-37289006 MsG0680032247.01.T01:CDS 45.0%
CTGCAGCTATTTGGAAGTCT+AGG + Chr6:37290606-37290625 MsG0680032247.01.T01:intron 45.0%
CTTCATCAGGAGTGGTTAGA+GGG + Chr6:37289546-37289565 MsG0680032247.01.T01:intron 45.0%
GACAAACGTGACTGAGTTGT+AGG + Chr6:37291280-37291299 MsG0680032247.01.T01:intron 45.0%
GACGCTTCACATACTTCATC+AGG + Chr6:37289533-37289552 MsG0680032247.01.T01:intron 45.0%
GATGAATCAATAGGCTTGCC+GGG + Chr6:37290820-37290839 MsG0680032247.01.T01:intron 45.0%
GATTATCATTGCGACGACCT+AGG + Chr6:37289875-37289894 MsG0680032247.01.T01:intron 45.0%
GCAACAAGAACCACCTGATT+CGG - Chr6:37289358-37289377 None:intergenic 45.0%
GGAACCAATTTCCCTTCTAG+TGG - Chr6:37291154-37291173 None:intergenic 45.0%
GGAATTTGGTTACGGGTTCT+GGG + Chr6:37289290-37289309 MsG0680032247.01.T01:intron 45.0%
GGCTGTGGTTAATCTAGGTA+AGG + Chr6:37289015-37289034 MsG0680032247.01.T01:intron 45.0%
GGTAAAGTTACCCCGTTAGA+TGG + Chr6:37289923-37289942 MsG0680032247.01.T01:intron 45.0%
GTCTCACTTCATCCCAACAA+AGG - Chr6:37291707-37291726 None:intergenic 45.0%
GTCTTGGAATTGGCATAGGA+AGG + Chr6:37288290-37288309 MsG0680032247.01.T01:intron 45.0%
GTGGAGATCTTGTTAATGGG+TGG - Chr6:37291135-37291154 None:intergenic 45.0%
GTGTGGTTTGATCACCAAGT+TGG + Chr6:37287775-37287794 MsG0680032247.01.T01:CDS 45.0%
TAATGGTGGCCATTCCATAG+GGG - Chr6:37289954-37289973 None:intergenic 45.0%
TAATGGTGGCCTTTCCATAG+GGG - Chr6:37290076-37290095 None:intergenic 45.0%
TATGGGAGCTGATGCAGAAT+TGG + Chr6:37289464-37289483 MsG0680032247.01.T01:intron 45.0%
TCAGGTGGTTCTTGTTGCTA+TGG + Chr6:37289360-37289379 MsG0680032247.01.T01:intron 45.0%
TCCGATCTTTCACACTCTTG+AGG - Chr6:37291781-37291800 None:intergenic 45.0%
TCTCTCTGTAACTCCGAATC+AGG + Chr6:37289342-37289361 MsG0680032247.01.T01:intron 45.0%
TCTGAGCCCAATGTCGTAAA+GGG - Chr6:37290287-37290306 None:intergenic 45.0%
TGGAATTTGGTTACGGGTTC+TGG + Chr6:37289289-37289308 MsG0680032247.01.T01:intron 45.0%
TTCGGCCAAAGTGGAAAAGA+AGG - Chr6:37288811-37288830 None:intergenic 45.0%
TTCTGAGCCCAATGTCGTAA+AGG - Chr6:37290288-37290307 None:intergenic 45.0%
TTGCGTAGAAGCTTCTAGCA+GGG + Chr6:37290498-37290517 MsG0680032247.01.T01:intron 45.0%
! ACTTGGTGATCAAACCACAC+TGG - Chr6:37287775-37287794 None:intergenic 45.0%
! AGGAATGAAGGGTTTGGGTT+CGG - Chr6:37288829-37288848 None:intergenic 45.0%
! ATGCGGGGCATCACAAAATA+AGG - Chr6:37288531-37288550 None:intergenic 45.0%
! GATGAAGTATGTGAAGCGTC+CGG - Chr6:37289533-37289552 None:intergenic 45.0%
! GCCGGTCACGATTAATGTTT+TGG + Chr6:37290864-37290883 MsG0680032247.01.T01:intron 45.0%
! TTCGGTTCAGTATTGAGGTC+TGG + Chr6:37289427-37289446 MsG0680032247.01.T01:intron 45.0%
!! CGCCTTTAGGAAGAAGTGTT+AGG - Chr6:37287464-37287483 None:intergenic 45.0%
!! GGCACCGGTTTCACTAATTT+CGG + Chr6:37289409-37289428 MsG0680032247.01.T01:intron 45.0%
!! GTTTTGGGTCGTGACAAAGT+TGG + Chr6:37290880-37290899 MsG0680032247.01.T01:intron 45.0%
!!! TCATTTTTGGTAGGCCCTCT+TGG + Chr6:37290538-37290557 MsG0680032247.01.T01:intron 45.0%
AGGAGAGGGCTATCAATGAG+AGG + Chr6:37289976-37289995 MsG0680032247.01.T01:intron 50.0%
ATGGAAAGGCCACCATTAGG+AGG + Chr6:37290078-37290097 MsG0680032247.01.T01:intron 50.0%
ATGGAATGGCCACCATTAGG+AGG + Chr6:37289956-37289975 MsG0680032247.01.T01:intron 50.0%
CCTAATGGTGGCCATTCCAT+AGG - Chr6:37289956-37289975 None:intergenic 50.0%
CCTAATGGTGGCCTTTCCAT+AGG - Chr6:37290078-37290097 None:intergenic 50.0%
CCTATGGAAAGGCCACCATT+AGG + Chr6:37290075-37290094 MsG0680032247.01.T01:intron 50.0%
CCTATGGAATGGCCACCATT+AGG + Chr6:37289953-37289972 MsG0680032247.01.T01:intron 50.0%
CGTCATTCAGGCTGTTCTCA+TGG + Chr6:37291217-37291236 MsG0680032247.01.T01:intron 50.0%
CTCTGTAACTCCGAATCAGG+TGG + Chr6:37289345-37289364 MsG0680032247.01.T01:intron 50.0%
CTGAGCCCAATGTCGTAAAG+GGG - Chr6:37290286-37290305 None:intergenic 50.0%
GGTATCAGAGCTCCGTTTGT+AGG + Chr6:37290901-37290920 MsG0680032247.01.T01:intron 50.0%
TATCAGAAACTGCACGCGGA+GGG + Chr6:37287712-37287731 MsG0680032247.01.T01:intron 50.0%
TCATAGCCCTCTCCTCCTAA+TGG - Chr6:37290093-37290112 None:intergenic 50.0%
TGAAGCCCAATTGAGCTCAG+TGG + Chr6:37287185-37287204 MsG0680032247.01.T01:CDS 50.0%
TGATAGCCCTCTCCTCCTAA+TGG - Chr6:37289971-37289990 None:intergenic 50.0%
TGCAAAGTGGTGCACATCCT+TGG + Chr6:37287428-37287447 MsG0680032247.01.T01:CDS 50.0%
TTATCAGAAACTGCACGCGG+AGG + Chr6:37287711-37287730 MsG0680032247.01.T01:intron 50.0%
! ACTTTAGGGGCTGAAGCTAG+AGG + Chr6:37288977-37288996 MsG0680032247.01.T01:intron 50.0%
! TGAAACCGGTGCCAAAACGT+CGG - Chr6:37289402-37289421 None:intergenic 50.0%
! TTTTGGTAGGCCCTCTTGGA+TGG + Chr6:37290542-37290561 MsG0680032247.01.T01:intron 50.0%
!! AATTGCCGACGTTTTGGCAC+CGG + Chr6:37289394-37289413 MsG0680032247.01.T01:intron 50.0%
!! CTAATTGTGCTGCTTTGCGG+AGG + Chr6:37291947-37291966 MsG0680032247.01.T01:CDS 50.0%
!! CTCTGTCTTGTTGTTCGAGC+CGG + Chr6:37287850-37287869 MsG0680032247.01.T01:CDS 50.0%
!! GAATGTTCTAGTTCGTGCGC+CGG + Chr6:37290846-37290865 MsG0680032247.01.T01:intron 50.0%
AAGGCCACCATTAGGAGGAG+AGG + Chr6:37290083-37290102 MsG0680032247.01.T01:intron 55.0%
AGGCCACCATTAGGAGGAGA+GGG + Chr6:37290084-37290103 MsG0680032247.01.T01:intron 55.0%
ATAGGGGCGGCTCCATCTAA+CGG - Chr6:37289938-37289957 None:intergenic 55.0%
ATGGCCACCATTAGGAGGAG+AGG + Chr6:37289961-37289980 MsG0680032247.01.T01:intron 55.0%
CTGCTACTCAGTTGTGCACG+CGG - Chr6:37287963-37287982 None:intergenic 55.0%
GGAGAGGGCTATGAACGAGA+TGG + Chr6:37290099-37290118 MsG0680032247.01.T01:intron 55.0%
TAGCCCTCTCCTCCTAATGG+TGG - Chr6:37289968-37289987 None:intergenic 55.0%
TGGCCACCATTAGGAGGAGA+GGG + Chr6:37289962-37289981 MsG0680032247.01.T01:intron 55.0%
!! TGGTTACGGGTTCTGGGACA+GGG + Chr6:37289296-37289315 MsG0680032247.01.T01:intron 55.0%
!! TTGGTTACGGGTTCTGGGAC+AGG + Chr6:37289295-37289314 MsG0680032247.01.T01:intron 55.0%
ATGGAGCCGCCCCTATGGAA+AGG + Chr6:37289942-37289961 MsG0680032247.01.T01:intron 60.0%
ATGGAGCCGCCCCTATGGAA+TGG + Chr6:37289942-37289961 MsG0680032247.01.T01:intron 60.0%
GTTAGATGGAGCCGCCCCTA+TGG + Chr6:37289937-37289956 MsG0680032247.01.T01:intron 60.0%
TAGGGGCGGCTCCATCTAAC+GGG - Chr6:37289937-37289956 None:intergenic 60.0%
TGGTGGCCATTCCATAGGGG+CGG - Chr6:37289951-37289970 None:intergenic 60.0%
TGGTGGCCTTTCCATAGGGG+CGG - Chr6:37290073-37290092 None:intergenic 60.0%
! GGGTTTGGGTTCGGCCAAAG+TGG - Chr6:37288820-37288839 None:intergenic 60.0%
AGGGGCGGCTCCATCTAACG+GGG - Chr6:37289936-37289955 None:intergenic 65.0%
CAGAAACTGCACGCGGAGGG+TGG + Chr6:37287715-37287734 MsG0680032247.01.T01:intron 65.0%
GCACGCGGAGGGTGGCAACA+AGG + Chr6:37287723-37287742 MsG0680032247.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 37286997 37291981 37286997 ID=MsG0680032247.01;Name=MsG0680032247.01
Chr6 mRNA 37286997 37291981 37286997 ID=MsG0680032247.01.T01;Parent=MsG0680032247.01;Name=MsG0680032247.01.T01;_AED=0.45;_eAED=0.49;_QI=0|0|0|1|1|1|4|0|305
Chr6 exon 37286997 37287488 37286997 ID=MsG0680032247.01.T01:exon:20254;Parent=MsG0680032247.01.T01
Chr6 exon 37287718 37287871 37287718 ID=MsG0680032247.01.T01:exon:20255;Parent=MsG0680032247.01.T01
Chr6 exon 37288984 37289031 37288984 ID=MsG0680032247.01.T01:exon:20256;Parent=MsG0680032247.01.T01
Chr6 exon 37291758 37291981 37291758 ID=MsG0680032247.01.T01:exon:20257;Parent=MsG0680032247.01.T01
Chr6 CDS 37286997 37287488 37286997 ID=MsG0680032247.01.T01:cds;Parent=MsG0680032247.01.T01
Chr6 CDS 37287718 37287871 37287718 ID=MsG0680032247.01.T01:cds;Parent=MsG0680032247.01.T01
Chr6 CDS 37288984 37289031 37288984 ID=MsG0680032247.01.T01:cds;Parent=MsG0680032247.01.T01
Chr6 CDS 37291758 37291981 37291758 ID=MsG0680032247.01.T01:cds;Parent=MsG0680032247.01.T01
Gene Sequence

>MsG0680032247.01.T01

ATGTTTGATTTACTGGACACTCCGATAAAAGAACTTCCGTTTACAATTCACAATCTCACCCGACTTGAAAGAGTAGTACTGATTGGTTGTGGTGTTGTTCAGTTACCGAGTAGTATTTTTGTGATGCCGGAACTTCATCAGTTAATTGCTGGGGAATGTACGTTGTTATTACCAAAATCAGCCGATTTTGAAGCCCAATTGAGCTCAGTGGTCTTAAATTTAGGTCTTTCAGGCTGCCACGTATCAGAAGATTTCCTTCGAATTGGTATGCCTTTGTTTTCTAACGTGAAAGAGTTATACTTGTCGCAGAATAAATTTACAATTCTTCCTGCATGCATCAAAGAATGTTACATTCTAACCAAAATTCATTTAGAAGGTTGCAAAAATCTCAAAAAAATTTGTGGTATTCCTCCAAACTTGGAAACATTATCTGCAAAGTGGTGCACATCCTTGGTAAATTTAGACCTAACACTTCTTCCTAAAGGCGTCAAAAAACTGCACGCGGAGGGTGGCAACAAGGAGTTTCACATACCAGAAAGACGTATTCCAGTGTGGTTTGATCACCAAGTTGGTCATGATGCATCAATTACTTTCTGGTTTCGTCAAAAGATCCCTGCAATATCTCTCTGTCTTGTTGTTCGAGCCGGGGCTGAAGCTAGAGGATTGACAAGGAATAAGGCTGTGGTTAATCTAGAAAGTGTTGGAGATGAGTTTCCTCAAGAGTGTGAAAGATCGGACCAAACTGAGTTCATGCCAGTTTTAGAGTACAAAACCCGTCTTATTGAGCTTTCAATGAACACTCCTCACCCTATCATAGTAGAGATGTGTGTCAAGTGGTTTATTATAAAATTAAGGGAATGCTTAATTGGATTCGTGGTTAGATCTAATTGTGCTGCTTTGCGGAGGTTTAAAGCTTAA
Protein sequence

>MsG0680032247.01.T01

MFDLLDTPIKELPFTIHNLTRLERVVLIGCGVVQLPSSIFVMPELHQLIAGECTLLLPKSADFEAQLSSVVLNLGLSGCHVSEDFLRIGMPLFSNVKELYLSQNKFTILPACIKECYILTKIHLEGCKNLKKICGIPPNLETLSAKWCTSLVNLDLTLLPKGVKKLHAEGGNKEFHIPERRIPVWFDHQVGHDASITFWFRQKIPAISLCLVVRAGAEARGLTRNKAVVNLESVGDEFPQECERSDQTEFMPVLEYKTRLIELSMNTPHPIIVEMCVKWFIIKLRECLIGFVVRSNCAALRRFKA*