Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033235.01.T01 | AES68356.1 | 81.897 | 464 | 30 | 3 | 1 | 411 | 1 | 463 | 0 | 752 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033235.01.T01 | Q69F95 | 70.043 | 464 | 85 | 3 | 1 | 411 | 1 | 463 | 0 | 647 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033235.01.T01 | G7IV83 | 81.897 | 464 | 30 | 3 | 1 | 411 | 1 | 463 | 0.0 | 752 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0680033235.01 | MsG0680033238.01 | 0.844490 | 7.321133e-59 | 1.183943e-55 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033235.01.T01 | MTR_3g007320 | 81.897 | 464 | 30 | 3 | 1 | 411 | 1 | 463 | 0.0 | 752 |
| MsG0680033235.01.T01 | MTR_6g015910 | 82.151 | 465 | 29 | 3 | 1 | 412 | 1 | 464 | 0.0 | 750 |
| MsG0680033235.01.T01 | MTR_7g016040 | 68.467 | 463 | 93 | 2 | 1 | 411 | 1 | 462 | 0.0 | 643 |
| MsG0680033235.01.T01 | MTR_7g016040 | 79.109 | 359 | 74 | 1 | 1 | 359 | 1 | 358 | 0.0 | 604 |
| MsG0680033235.01.T01 | MTR_3g070380 | 35.967 | 367 | 217 | 7 | 25 | 382 | 21 | 378 | 7.90e-76 | 244 |
| MsG0680033235.01.T01 | MTR_8g016180 | 34.000 | 350 | 219 | 6 | 29 | 369 | 33 | 379 | 5.52e-72 | 232 |
| MsG0680033235.01.T01 | MTR_5g082520 | 35.429 | 350 | 212 | 7 | 29 | 369 | 24 | 368 | 1.44e-71 | 232 |
| MsG0680033235.01.T01 | MTR_8g016180 | 34.000 | 350 | 219 | 6 | 29 | 369 | 33 | 379 | 3.52e-71 | 231 |
| MsG0680033235.01.T01 | MTR_7g033040 | 33.420 | 383 | 248 | 2 | 1 | 376 | 1 | 383 | 5.97e-63 | 210 |
| MsG0680033235.01.T01 | MTR_8g077810 | 34.626 | 361 | 215 | 7 | 29 | 372 | 26 | 382 | 4.23e-62 | 209 |
| MsG0680033235.01.T01 | MTR_5g010750 | 30.749 | 374 | 240 | 9 | 8 | 368 | 6 | 373 | 3.01e-60 | 202 |
| MsG0680033235.01.T01 | MTR_8g072260 | 35.905 | 337 | 206 | 7 | 33 | 365 | 37 | 367 | 3.66e-60 | 202 |
| MsG0680033235.01.T01 | MTR_8g072260 | 35.905 | 337 | 206 | 7 | 33 | 365 | 37 | 367 | 4.01e-60 | 202 |
| MsG0680033235.01.T01 | MTR_8g072260 | 35.905 | 337 | 206 | 7 | 33 | 365 | 37 | 367 | 7.60e-60 | 201 |
| MsG0680033235.01.T01 | MTR_5g025610 | 33.962 | 371 | 227 | 8 | 1 | 365 | 7 | 365 | 9.45e-60 | 200 |
| MsG0680033235.01.T01 | MTR_5g010750 | 30.184 | 381 | 247 | 9 | 4 | 371 | 2 | 376 | 1.02e-59 | 202 |
| MsG0680033235.01.T01 | MTR_5g021220 | 29.787 | 423 | 258 | 12 | 1 | 389 | 5 | 422 | 1.82e-59 | 201 |
| MsG0680033235.01.T01 | MTR_5g025610 | 33.875 | 369 | 230 | 7 | 1 | 365 | 7 | 365 | 2.18e-59 | 200 |
| MsG0680033235.01.T01 | MTR_8g076510 | 30.435 | 345 | 229 | 5 | 34 | 368 | 40 | 383 | 3.24e-59 | 200 |
| MsG0680033235.01.T01 | MTR_5g025610 | 33.875 | 369 | 230 | 7 | 1 | 365 | 7 | 365 | 5.48e-59 | 199 |
| MsG0680033235.01.T01 | MTR_5g020020 | 33.333 | 354 | 218 | 6 | 33 | 372 | 36 | 385 | 1.52e-58 | 199 |
| MsG0680033235.01.T01 | MTR_4g086130 | 31.085 | 341 | 228 | 6 | 30 | 365 | 32 | 370 | 3.72e-54 | 187 |
| MsG0680033235.01.T01 | MTR_1g019410 | 30.588 | 340 | 226 | 7 | 33 | 365 | 35 | 371 | 1.32e-51 | 180 |
| MsG0680033235.01.T01 | MTR_5g091760 | 29.091 | 385 | 236 | 8 | 19 | 377 | 18 | 391 | 1.32e-50 | 177 |
| MsG0680033235.01.T01 | MTR_1g037580 | 27.778 | 378 | 264 | 6 | 4 | 377 | 18 | 390 | 4.39e-49 | 173 |
| MsG0680033235.01.T01 | MTR_6g069000 | 28.302 | 371 | 246 | 7 | 12 | 368 | 14 | 378 | 5.29e-48 | 170 |
| MsG0680033235.01.T01 | MTR_4g086040 | 31.085 | 341 | 228 | 6 | 30 | 365 | 35 | 373 | 5.58e-48 | 170 |
| MsG0680033235.01.T01 | MTR_6g069000 | 28.302 | 371 | 246 | 7 | 12 | 368 | 24 | 388 | 5.92e-48 | 170 |
| MsG0680033235.01.T01 | MTR_2g031920 | 29.056 | 413 | 260 | 12 | 4 | 386 | 8 | 417 | 7.29e-47 | 167 |
| MsG0680033235.01.T01 | MTR_2g031930 | 29.610 | 385 | 250 | 9 | 4 | 369 | 8 | 390 | 1.04e-46 | 166 |
| MsG0680033235.01.T01 | MTR_2g031930 | 29.921 | 381 | 246 | 9 | 4 | 365 | 12 | 390 | 2.19e-46 | 166 |
| MsG0680033235.01.T01 | MTR_8g089800 | 30.491 | 387 | 241 | 13 | 4 | 365 | 7 | 390 | 4.47e-46 | 166 |
| MsG0680033235.01.T01 | MTR_6g034940 | 28.000 | 400 | 255 | 10 | 1 | 381 | 14 | 399 | 7.04e-45 | 162 |
| MsG0680033235.01.T01 | MTR_0045s0060 | 27.249 | 389 | 256 | 10 | 6 | 372 | 3 | 386 | 2.32e-44 | 160 |
| MsG0680033235.01.T01 | MTR_0045s0080 | 27.226 | 393 | 240 | 13 | 8 | 372 | 6 | 380 | 6.24e-43 | 155 |
| MsG0680033235.01.T01 | MTR_3g112120 | 28.496 | 379 | 251 | 7 | 3 | 365 | 11 | 385 | 5.36e-41 | 152 |
| MsG0680033235.01.T01 | MTR_0045s0070 | 26.463 | 393 | 254 | 11 | 6 | 372 | 3 | 386 | 2.20e-40 | 149 |
| MsG0680033235.01.T01 | MTR_0045s0070 | 26.463 | 393 | 254 | 11 | 6 | 372 | 3 | 386 | 3.95e-40 | 149 |
| MsG0680033235.01.T01 | MTR_8g100135 | 26.010 | 396 | 270 | 10 | 3 | 381 | 5 | 394 | 1.93e-38 | 143 |
| MsG0680033235.01.T01 | MTR_5g014250 | 28.912 | 377 | 225 | 10 | 20 | 365 | 27 | 391 | 2.47e-38 | 144 |
| MsG0680033235.01.T01 | MTR_0045s0060 | 27.273 | 308 | 216 | 7 | 68 | 372 | 2 | 304 | 7.95e-38 | 141 |
| MsG0680033235.01.T01 | MTR_3g467140 | 28.721 | 383 | 247 | 10 | 4 | 369 | 7 | 380 | 2.25e-37 | 142 |
| MsG0680033235.01.T01 | MTR_8g100135 | 25.879 | 398 | 270 | 11 | 3 | 383 | 5 | 394 | 9.34e-37 | 140 |
| MsG0680033235.01.T01 | MTR_5g092150 | 27.049 | 366 | 248 | 7 | 31 | 381 | 27 | 388 | 1.26e-36 | 139 |
| MsG0680033235.01.T01 | MTR_8g076940 | 27.762 | 353 | 242 | 6 | 23 | 365 | 37 | 386 | 2.30e-36 | 138 |
| MsG0680033235.01.T01 | MTR_8g076940 | 27.762 | 353 | 242 | 6 | 23 | 365 | 37 | 386 | 4.00e-36 | 138 |
| MsG0680033235.01.T01 | MTR_8g012970 | 27.250 | 400 | 236 | 16 | 3 | 365 | 6 | 387 | 2.00e-35 | 136 |
| MsG0680033235.01.T01 | MTR_3g467130 | 26.425 | 386 | 257 | 10 | 5 | 369 | 1 | 380 | 2.36e-35 | 136 |
| MsG0680033235.01.T01 | MTR_8g076940 | 26.857 | 350 | 243 | 6 | 23 | 362 | 37 | 383 | 3.08e-34 | 131 |
| MsG0680033235.01.T01 | MTR_8g076940 | 27.089 | 347 | 240 | 6 | 23 | 359 | 37 | 380 | 5.41e-34 | 130 |
| MsG0680033235.01.T01 | MTR_4g005230 | 28.000 | 400 | 231 | 19 | 3 | 365 | 6 | 385 | 1.99e-33 | 130 |
| MsG0680033235.01.T01 | MTR_5g014240 | 28.571 | 371 | 243 | 9 | 20 | 370 | 27 | 395 | 3.55e-33 | 130 |
| MsG0680033235.01.T01 | MTR_5g020020 | 29.918 | 244 | 158 | 5 | 138 | 372 | 72 | 311 | 3.18e-30 | 120 |
| MsG0680033235.01.T01 | MTR_1g032950 | 24.311 | 399 | 242 | 12 | 1 | 365 | 3 | 375 | 3.17e-28 | 116 |
| MsG0680033235.01.T01 | MTR_8g089190 | 23.306 | 369 | 238 | 10 | 33 | 373 | 1 | 352 | 3.10e-26 | 110 |
| MsG0680033235.01.T01 | MTR_8g089190 | 23.269 | 361 | 232 | 10 | 33 | 365 | 1 | 344 | 1.85e-25 | 106 |
| MsG0680033235.01.T01 | MTR_1g032980 | 26.019 | 319 | 197 | 9 | 25 | 317 | 8 | 313 | 9.77e-23 | 99.4 |
| MsG0680033235.01.T01 | MTR_4g029690 | 24.779 | 339 | 202 | 15 | 4 | 307 | 7 | 327 | 3.69e-19 | 88.2 |
| MsG0680033235.01.T01 | MTR_0457s0020 | 26.500 | 200 | 141 | 5 | 106 | 301 | 24 | 221 | 3.85e-16 | 77.4 |
| MsG0680033235.01.T01 | MTR_3g467140 | 31.214 | 173 | 108 | 4 | 206 | 369 | 77 | 247 | 2.39e-15 | 77.4 |
| MsG0680033235.01.T01 | MTR_5g007450 | 34.483 | 145 | 89 | 4 | 228 | 370 | 253 | 393 | 5.16e-13 | 70.9 |
| MsG0680033235.01.T01 | MTR_2g019640 | 22.021 | 386 | 251 | 13 | 29 | 377 | 37 | 409 | 1.22e-12 | 69.7 |
| MsG0680033235.01.T01 | MTR_5g007550 | 33.793 | 145 | 90 | 4 | 228 | 370 | 253 | 393 | 1.63e-12 | 69.3 |
| MsG0680033235.01.T01 | MTR_8g008530 | 28.485 | 165 | 105 | 2 | 211 | 365 | 253 | 414 | 5.52e-12 | 67.8 |
| MsG0680033235.01.T01 | MTR_1g085680 | 23.077 | 325 | 212 | 10 | 76 | 372 | 104 | 418 | 2.90e-11 | 65.5 |
| MsG0680033235.01.T01 | MTR_4g005260 | 25.862 | 232 | 135 | 12 | 16 | 223 | 19 | 237 | 4.56e-11 | 63.2 |
| MsG0680033235.01.T01 | MTR_7g055793 | 24.471 | 331 | 214 | 11 | 61 | 365 | 44 | 364 | 4.82e-11 | 64.7 |
| MsG0680033235.01.T01 | MTR_7g055793 | 24.471 | 331 | 214 | 11 | 61 | 365 | 99 | 419 | 6.63e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033235.01.T01 | AT3G30180 | 60.129 | 464 | 130 | 6 | 1 | 410 | 1 | 463 | 0.0 | 561 |
| MsG0680033235.01.T01 | AT5G38970 | 58.836 | 464 | 136 | 6 | 1 | 410 | 1 | 463 | 0.0 | 550 |
| MsG0680033235.01.T01 | AT5G38970 | 67.204 | 372 | 119 | 3 | 1 | 370 | 1 | 371 | 0.0 | 528 |
| MsG0680033235.01.T01 | AT5G38970 | 56.919 | 383 | 111 | 5 | 81 | 410 | 1 | 382 | 4.75e-148 | 425 |
| MsG0680033235.01.T01 | AT5G38970 | 56.919 | 383 | 111 | 5 | 81 | 410 | 1 | 382 | 4.75e-148 | 425 |
| MsG0680033235.01.T01 | AT5G05690 | 34.293 | 382 | 221 | 8 | 32 | 392 | 30 | 402 | 8.25e-71 | 228 |
| MsG0680033235.01.T01 | AT4G19230 | 34.426 | 366 | 232 | 5 | 2 | 365 | 5 | 364 | 7.70e-69 | 225 |
| MsG0680033235.01.T01 | AT4G19230 | 34.426 | 366 | 232 | 5 | 2 | 365 | 5 | 364 | 1.17e-68 | 225 |
| MsG0680033235.01.T01 | AT5G05690 | 36.023 | 347 | 208 | 6 | 32 | 369 | 30 | 371 | 3.54e-68 | 224 |
| MsG0680033235.01.T01 | AT5G45340 | 34.247 | 365 | 234 | 4 | 2 | 365 | 5 | 364 | 1.34e-66 | 219 |
| MsG0680033235.01.T01 | AT5G45340 | 34.247 | 365 | 234 | 4 | 2 | 365 | 5 | 364 | 2.11e-66 | 219 |
| MsG0680033235.01.T01 | AT3G13730 | 33.069 | 378 | 226 | 8 | 33 | 387 | 51 | 424 | 2.56e-66 | 218 |
| MsG0680033235.01.T01 | AT3G13730 | 33.069 | 378 | 226 | 8 | 33 | 387 | 51 | 424 | 4.25e-66 | 219 |
| MsG0680033235.01.T01 | AT3G50660 | 32.000 | 400 | 223 | 8 | 33 | 388 | 39 | 433 | 1.39e-60 | 203 |
| MsG0680033235.01.T01 | AT3G50660 | 32.546 | 381 | 218 | 6 | 27 | 372 | 33 | 409 | 5.06e-60 | 203 |
| MsG0680033235.01.T01 | AT3G19270 | 30.811 | 370 | 249 | 7 | 1 | 365 | 1 | 368 | 1.77e-57 | 195 |
| MsG0680033235.01.T01 | AT4G36380 | 29.288 | 379 | 245 | 8 | 33 | 390 | 69 | 445 | 1.91e-57 | 197 |
| MsG0680033235.01.T01 | AT3G19270 | 30.811 | 370 | 249 | 7 | 1 | 365 | 1 | 368 | 5.08e-57 | 194 |
| MsG0680033235.01.T01 | AT1G12740 | 28.142 | 366 | 251 | 8 | 12 | 368 | 11 | 373 | 2.48e-54 | 187 |
| MsG0680033235.01.T01 | AT4G36380 | 28.771 | 358 | 242 | 6 | 33 | 378 | 69 | 425 | 1.03e-52 | 182 |
| MsG0680033235.01.T01 | AT1G12740 | 28.011 | 357 | 245 | 8 | 12 | 359 | 11 | 364 | 1.10e-52 | 180 |
| MsG0680033235.01.T01 | AT1G12740 | 27.957 | 372 | 250 | 9 | 12 | 368 | 11 | 379 | 1.79e-52 | 182 |
| MsG0680033235.01.T01 | AT2G29090 | 31.445 | 353 | 234 | 6 | 21 | 369 | 40 | 388 | 4.64e-52 | 181 |
| MsG0680033235.01.T01 | AT2G29090 | 31.445 | 353 | 234 | 6 | 21 | 369 | 40 | 388 | 4.64e-52 | 181 |
| MsG0680033235.01.T01 | AT5G14400 | 32.335 | 334 | 210 | 4 | 38 | 359 | 1 | 330 | 5.20e-52 | 177 |
| MsG0680033235.01.T01 | AT1G12740 | 27.688 | 372 | 251 | 9 | 12 | 368 | 11 | 379 | 6.85e-52 | 181 |
| MsG0680033235.01.T01 | AT1G73340 | 30.133 | 375 | 236 | 8 | 4 | 368 | 20 | 378 | 5.59e-51 | 179 |
| MsG0680033235.01.T01 | AT1G55940 | 30.751 | 413 | 250 | 14 | 1 | 386 | 18 | 421 | 4.81e-50 | 176 |
| MsG0680033235.01.T01 | AT1G55940 | 30.751 | 413 | 250 | 14 | 1 | 386 | 18 | 421 | 9.71e-50 | 176 |
| MsG0680033235.01.T01 | AT5G14400 | 30.347 | 346 | 207 | 5 | 38 | 371 | 1 | 324 | 9.79e-46 | 162 |
| MsG0680033235.01.T01 | AT5G14400 | 30.347 | 346 | 207 | 5 | 38 | 371 | 1 | 324 | 2.65e-45 | 162 |
| MsG0680033235.01.T01 | AT5G05690 | 34.902 | 255 | 157 | 4 | 119 | 369 | 3 | 252 | 1.49e-43 | 155 |
| MsG0680033235.01.T01 | AT2G32440 | 27.249 | 389 | 250 | 9 | 1 | 365 | 9 | 388 | 7.91e-43 | 157 |
| MsG0680033235.01.T01 | AT2G32440 | 27.249 | 389 | 250 | 9 | 1 | 365 | 9 | 388 | 7.91e-43 | 157 |
| MsG0680033235.01.T01 | AT4G15396 | 28.684 | 380 | 243 | 10 | 4 | 367 | 7 | 374 | 1.12e-41 | 152 |
| MsG0680033235.01.T01 | AT4G15396 | 28.471 | 425 | 265 | 13 | 4 | 404 | 7 | 416 | 1.49e-41 | 152 |
| MsG0680033235.01.T01 | AT4G15396 | 28.471 | 425 | 265 | 13 | 4 | 404 | 7 | 416 | 1.58e-41 | 153 |
| MsG0680033235.01.T01 | AT1G05160 | 26.289 | 388 | 252 | 10 | 3 | 365 | 12 | 390 | 3.17e-41 | 152 |
| MsG0680033235.01.T01 | AT1G05160 | 26.289 | 388 | 252 | 10 | 3 | 365 | 12 | 390 | 3.17e-41 | 152 |
| MsG0680033235.01.T01 | AT1G78490 | 28.796 | 382 | 245 | 12 | 5 | 368 | 7 | 379 | 6.24e-40 | 147 |
| MsG0680033235.01.T01 | AT5G48000 | 27.793 | 367 | 243 | 9 | 20 | 371 | 23 | 382 | 1.20e-39 | 148 |
| MsG0680033235.01.T01 | AT5G48000 | 27.793 | 367 | 243 | 9 | 20 | 371 | 23 | 382 | 1.20e-39 | 148 |
| MsG0680033235.01.T01 | AT5G48000 | 27.793 | 367 | 243 | 9 | 20 | 371 | 23 | 382 | 1.20e-39 | 148 |
| MsG0680033235.01.T01 | AT5G48000 | 27.793 | 367 | 243 | 9 | 20 | 371 | 23 | 382 | 1.20e-39 | 148 |
| MsG0680033235.01.T01 | AT5G48000 | 27.793 | 367 | 243 | 9 | 20 | 371 | 23 | 382 | 1.20e-39 | 148 |
| MsG0680033235.01.T01 | AT5G48000 | 27.793 | 367 | 243 | 9 | 20 | 371 | 23 | 382 | 1.20e-39 | 148 |
| MsG0680033235.01.T01 | AT1G78490 | 28.796 | 382 | 245 | 12 | 5 | 368 | 7 | 379 | 1.56e-39 | 147 |
| MsG0680033235.01.T01 | AT5G48000 | 27.793 | 367 | 243 | 9 | 20 | 371 | 64 | 423 | 2.00e-39 | 148 |
| MsG0680033235.01.T01 | AT4G15300 | 27.962 | 422 | 271 | 13 | 7 | 408 | 1 | 409 | 4.07e-39 | 146 |
| MsG0680033235.01.T01 | AT4G15300 | 27.962 | 422 | 271 | 13 | 7 | 408 | 11 | 419 | 6.50e-39 | 146 |
| MsG0680033235.01.T01 | AT1G19630 | 27.513 | 378 | 243 | 10 | 12 | 365 | 6 | 376 | 1.26e-38 | 144 |
| MsG0680033235.01.T01 | AT1G19630 | 27.513 | 378 | 243 | 10 | 12 | 365 | 6 | 376 | 1.28e-38 | 144 |
| MsG0680033235.01.T01 | AT4G15396 | 27.407 | 405 | 258 | 11 | 4 | 384 | 7 | 399 | 1.33e-38 | 144 |
| MsG0680033235.01.T01 | AT1G19630 | 27.513 | 378 | 243 | 10 | 12 | 365 | 6 | 376 | 2.45e-38 | 144 |
| MsG0680033235.01.T01 | AT2G42850 | 29.651 | 344 | 222 | 8 | 36 | 365 | 48 | 385 | 4.03e-37 | 139 |
| MsG0680033235.01.T01 | AT4G15393 | 26.913 | 379 | 249 | 10 | 4 | 367 | 7 | 372 | 6.49e-37 | 139 |
| MsG0680033235.01.T01 | AT2G42850 | 28.652 | 356 | 234 | 7 | 36 | 377 | 48 | 397 | 6.97e-37 | 140 |
| MsG0680033235.01.T01 | AT1G65670 | 26.884 | 398 | 252 | 11 | 33 | 408 | 35 | 415 | 1.35e-36 | 139 |
| MsG0680033235.01.T01 | AT4G15393 | 26.913 | 379 | 249 | 10 | 4 | 367 | 7 | 372 | 2.00e-36 | 139 |
| MsG0680033235.01.T01 | AT3G44970 | 27.340 | 406 | 253 | 14 | 22 | 396 | 25 | 419 | 6.44e-36 | 137 |
| MsG0680033235.01.T01 | AT2G29090 | 29.474 | 285 | 194 | 5 | 21 | 302 | 40 | 320 | 9.41e-36 | 134 |
| MsG0680033235.01.T01 | AT4G15300 | 27.252 | 444 | 268 | 15 | 7 | 408 | 1 | 431 | 1.07e-35 | 137 |
| MsG0680033235.01.T01 | AT2G29090 | 29.655 | 290 | 200 | 4 | 83 | 369 | 5 | 293 | 1.47e-35 | 135 |
| MsG0680033235.01.T01 | AT4G15310 | 27.083 | 384 | 251 | 10 | 5 | 371 | 9 | 380 | 7.98e-32 | 126 |
| MsG0680033235.01.T01 | AT5G14400 | 28.179 | 291 | 180 | 4 | 88 | 371 | 2 | 270 | 8.68e-30 | 119 |
| MsG0680033235.01.T01 | AT3G30290 | 27.393 | 303 | 211 | 6 | 67 | 365 | 4 | 301 | 1.17e-28 | 116 |
| MsG0680033235.01.T01 | AT5G36110 | 27.350 | 351 | 229 | 11 | 33 | 365 | 34 | 376 | 2.03e-28 | 115 |
| MsG0680033235.01.T01 | AT5G36110 | 26.761 | 355 | 234 | 11 | 33 | 369 | 34 | 380 | 6.35e-28 | 115 |
| MsG0680033235.01.T01 | AT4G15393 | 25.806 | 372 | 229 | 10 | 4 | 367 | 7 | 339 | 1.29e-27 | 112 |
| MsG0680033235.01.T01 | AT3G44970 | 27.575 | 301 | 193 | 8 | 33 | 317 | 35 | 326 | 8.19e-27 | 110 |
| MsG0680033235.01.T01 | AT5G36140 | 26.056 | 284 | 187 | 11 | 28 | 296 | 28 | 303 | 1.15e-20 | 92.4 |
| MsG0680033235.01.T01 | AT2G34490 | 24.691 | 405 | 262 | 15 | 8 | 377 | 5 | 401 | 2.39e-18 | 87.4 |
| MsG0680033235.01.T01 | AT2G28860 | 22.016 | 377 | 258 | 11 | 27 | 377 | 31 | 397 | 9.91e-16 | 79.3 |
| MsG0680033235.01.T01 | AT2G34500 | 22.703 | 370 | 261 | 12 | 28 | 377 | 32 | 396 | 4.87e-15 | 77.4 |
Find 83 sgRNAs with CRISPR-Local
Find 186 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGTTGTATTATATTTA+TGG | 0.078901 | 6:+60184279 | MsG0680033235.01.T01:intron |
| TGAGTGCTCAATTAAGAAAT+TGG | 0.179320 | 6:+60181760 | MsG0680033235.01.T01:CDS |
| GTGATTACACTTATGTATTC+TGG | 0.235621 | 6:+60182700 | MsG0680033235.01.T01:CDS |
| GGCAATTGTTGGTGTATTCT+TGG | 0.271717 | 6:+60180968 | MsG0680033235.01.T01:CDS |
| TTGGAATCAATTGGTTCATT+TGG | 0.284445 | 6:-60183111 | None:intergenic |
| CCTCATTGATTTGAGATCAT+TGG | 0.289403 | 6:-60183130 | None:intergenic |
| ACATATATTCTCCACCCTTT+AGG | 0.292436 | 6:-60183746 | None:intergenic |
| CATGTCTTTGTGAATTTCAT+TGG | 0.296748 | 6:-60182611 | None:intergenic |
| CTTAGTTCTTCAAGAGCTTT+GGG | 0.308614 | 6:-60182778 | None:intergenic |
| ACTCAAGATATGGAACTAAA+TGG | 0.315249 | 6:+60183305 | MsG0680033235.01.T01:CDS |
| TGTAATATTGCAGCTGTTCA+TGG | 0.324992 | 6:+60181645 | MsG0680033235.01.T01:CDS |
| AAATTACTACCGTGGATTTC+AGG | 0.325703 | 6:+60182203 | MsG0680033235.01.T01:CDS |
| TCTTAGTTCTTCAAGAGCTT+TGG | 0.328150 | 6:-60182779 | None:intergenic |
| TCTTGAGGTGGAATGAATTA+AGG | 0.328287 | 6:+60181012 | MsG0680033235.01.T01:CDS |
| TCTCTACCTATTAACCTTCC+TGG | 0.342160 | 6:+60182177 | MsG0680033235.01.T01:CDS |
| AGATTGGCCACAATAGTTAA+TGG | 0.347801 | 6:+60183266 | MsG0680033235.01.T01:CDS |
| CAGTCCTACAATTGTTTCAA+TGG | 0.351845 | 6:+60181533 | MsG0680033235.01.T01:CDS |
| GAATCAAAAGGTCTTGTTCC+TGG | 0.366672 | 6:+60181588 | MsG0680033235.01.T01:CDS |
| CAATCTATGTTAGATATCTT+AGG | 0.381536 | 6:+60181618 | MsG0680033235.01.T01:CDS |
| AAGGAAAACCACTCAAGATA+TGG | 0.388385 | 6:+60183295 | MsG0680033235.01.T01:CDS |
| TTGAGATCATTGGAATCAAT+TGG | 0.391057 | 6:-60183120 | None:intergenic |
| ATGTATTTAATGTGGATTGC+AGG | 0.414447 | 6:+60184320 | MsG0680033235.01.T01:CDS |
| TATGTTGCAGAAAGAGCATT+TGG | 0.418914 | 6:+60183068 | MsG0680033235.01.T01:intron |
| ATAAACTAATGATATTTCCT+AGG | 0.420848 | 6:+60184362 | MsG0680033235.01.T01:CDS |
| TCAGGCTATTTGATTCCTAA+AGG | 0.425060 | 6:+60183731 | MsG0680033235.01.T01:intron |
| CAATAGTTAATGGAGTTCTA+AGG | 0.425337 | 6:+60183276 | MsG0680033235.01.T01:CDS |
| TTTGTGCCAGGAAGGTTAAT+AGG | 0.425584 | 6:-60182183 | None:intergenic |
| CAGGCTATTTGATTCCTAAA+GGG | 0.425698 | 6:+60183732 | MsG0680033235.01.T01:intron |
| CTCATAAACTCATCAAGTTT+AGG | 0.427808 | 6:-60181741 | None:intergenic |
| CCATTTGGTGCTTGAACCCT+AGG | 0.428305 | 6:-60184379 | None:intergenic |
| GGTTTGCCACTTGGAACAAT+GGG | 0.432642 | 6:+60181047 | MsG0680033235.01.T01:CDS |
| GGATCCATTGAAACAATTGT+AGG | 0.439227 | 6:-60181537 | None:intergenic |
| CAATCTGCTTCAAAGATAAG+AGG | 0.448118 | 6:-60182080 | None:intergenic |
| GAAGGTTAATAGGTAGAGAA+AGG | 0.454537 | 6:-60182173 | None:intergenic |
| GGTGGAATGAATTAAGGTAT+AGG | 0.456839 | 6:+60181018 | MsG0680033235.01.T01:CDS |
| GATTGCAGGTGGGAAGAAGT+AGG | 0.458025 | 6:+60184334 | MsG0680033235.01.T01:CDS |
| ATTGCAGGTGGGAAGAAGTA+GGG | 0.460267 | 6:+60184335 | MsG0680033235.01.T01:CDS |
| GAGTGCTCAATTAAGAAATT+GGG | 0.460537 | 6:+60181761 | MsG0680033235.01.T01:CDS |
| AACATAGATTGAGGGTATCC+AGG | 0.474366 | 6:-60181606 | None:intergenic |
| AGGAAGAAAGGTTTGCCACT+TGG | 0.476578 | 6:+60181038 | MsG0680033235.01.T01:CDS |
| GAATTAAGGTATAGGAAGAA+AGG | 0.478173 | 6:+60181026 | MsG0680033235.01.T01:CDS |
| CCTAGGGTTCAAGCACCAAA+TGG | 0.479659 | 6:+60184379 | MsG0680033235.01.T01:CDS |
| GAAATTCACAAAGACATGCT+TGG | 0.481721 | 6:+60182616 | MsG0680033235.01.T01:CDS |
| AAGATATCTAACATAGATTG+AGG | 0.490997 | 6:-60181615 | None:intergenic |
| CATTCAAGAGAAAACTAAAG+AGG | 0.492323 | 6:+60181800 | MsG0680033235.01.T01:CDS |
| AATCTCATGTGCAATCCATT+TGG | 0.509279 | 6:-60184394 | None:intergenic |
| TTGCAGGTGGGAAGAAGTAG+GGG | 0.511165 | 6:+60184336 | MsG0680033235.01.T01:CDS |
| AGGTTTGCCACTTGGAACAA+TGG | 0.517785 | 6:+60181046 | MsG0680033235.01.T01:CDS |
| AATATGTATCTATTAAGCTC+TGG | 0.520077 | 6:-60181558 | None:intergenic |
| ATCTTATTATGTATTTAATG+TGG | 0.520312 | 6:+60184312 | MsG0680033235.01.T01:CDS |
| CAAAATCTGATCTCTAATCA+TGG | 0.523300 | 6:-60181718 | None:intergenic |
| TAGAACTCCATTAACTATTG+TGG | 0.528694 | 6:-60183273 | None:intergenic |
| CCACGGTAGTAATTTGTGCC+AGG | 0.530236 | 6:-60182195 | None:intergenic |
| ATCTGATCTCTAATCATGGT+AGG | 0.533088 | 6:-60181714 | None:intergenic |
| TGTTTCAACCACATCAATGA+TGG | 0.539760 | 6:+60182732 | MsG0680033235.01.T01:CDS |
| CAAGAGCTTTGGGATGGTCA+TGG | 0.540011 | 6:-60182768 | None:intergenic |
| TTTGCTCTGCTCTCTTGAGG+TGG | 0.540896 | 6:+60181000 | MsG0680033235.01.T01:CDS |
| ATATTATTGAATGAATCAAA+AGG | 0.544959 | 6:+60181576 | MsG0680033235.01.T01:CDS |
| AAGGTTAATAGGTAGAGAAA+GGG | 0.551413 | 6:-60182172 | None:intergenic |
| TAAACTAATGATATTTCCTA+GGG | 0.553866 | 6:+60184363 | MsG0680033235.01.T01:CDS |
| GTTTGAAGTGAGAGCACCAA+TGG | 0.554481 | 6:+60180935 | MsG0680033235.01.T01:exon |
| TCTGATCTCTAATCATGGTA+GGG | 0.571066 | 6:-60181713 | None:intergenic |
| AGATATCTAACATAGATTGA+GGG | 0.571106 | 6:-60181614 | None:intergenic |
| GAAAGAATCAGCTATTGTTG+AGG | 0.575225 | 6:-60182118 | None:intergenic |
| GGTAGTAATTTGTGCCAGGA+AGG | 0.579816 | 6:-60182191 | None:intergenic |
| GTTCTTCAAGAGCTTTGGGA+TGG | 0.582059 | 6:-60182774 | None:intergenic |
| ATTTAGTTCCATATCTTGAG+TGG | 0.582398 | 6:-60183303 | None:intergenic |
| TCCTCTCATGTACTTATGAG+TGG | 0.584741 | 6:-60181670 | None:intergenic |
| ATCAATGAGGTTTACTCGTG+CGG | 0.593673 | 6:+60183143 | MsG0680033235.01.T01:CDS |
| TGCCACTTGGAACAATGGGG+TGG | 0.609901 | 6:+60181051 | MsG0680033235.01.T01:CDS |
| TATTTAATGTGGATTGCAGG+TGG | 0.610391 | 6:+60184323 | MsG0680033235.01.T01:CDS |
| ACAACTGAGTTTCTTAAACA+AGG | 0.614414 | 6:+60181089 | MsG0680033235.01.T01:CDS |
| CCAATGATCTCAAATCAATG+AGG | 0.615147 | 6:+60183130 | MsG0680033235.01.T01:CDS |
| CTTCACAGCCATCATTGATG+TGG | 0.615703 | 6:-60182740 | None:intergenic |
| TGCAGGTGGGAAGAAGTAGG+GGG | 0.618400 | 6:+60184337 | MsG0680033235.01.T01:CDS |
| AGCATTTGGCCATAAGAGAG+AGG | 0.633673 | 6:+60183082 | MsG0680033235.01.T01:CDS |
| ATTTAATGTGGATTGCAGGT+GGG | 0.634424 | 6:+60184324 | MsG0680033235.01.T01:CDS |
| TCCACTCATAAGTACATGAG+AGG | 0.636687 | 6:+60181669 | MsG0680033235.01.T01:CDS |
| GTGATCAAACCTGAAATCCA+CGG | 0.641785 | 6:-60182212 | None:intergenic |
| CCTGGCACAAATTACTACCG+TGG | 0.647092 | 6:+60182195 | MsG0680033235.01.T01:CDS |
| GGCCACCCCATTGTTCCAAG+TGG | 0.661779 | 6:-60181053 | None:intergenic |
| GAGCTTTGGGATGGTCATGG+AGG | 0.674478 | 6:-60182765 | None:intergenic |
| GTTTGCCACTTGGAACAATG+GGG | 0.722941 | 6:+60181048 | MsG0680033235.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAAATTAATGCTAAA+AGG | - | Chr6:60183585-60183604 | None:intergenic | 10.0% |
| !! | TTAAGAAAAAATTATACTTA+AGG | - | Chr6:60182828-60182847 | None:intergenic | 10.0% |
| !!! | TATTATAAAGTATTTTAGTA+TGG | + | Chr6:60182510-60182529 | MsG0680033235.01.T01:intron | 10.0% |
| !!! | TATTTTTTTTATTACTATTG+TGG | - | Chr6:60181461-60181480 | None:intergenic | 10.0% |
| !! | ATATTATTGAATGAATCAAA+AGG | + | Chr6:60181576-60181595 | MsG0680033235.01.T01:CDS | 15.0% |
| !! | ATCTTATTATGTATTTAATG+TGG | + | Chr6:60184312-60184331 | MsG0680033235.01.T01:CDS | 15.0% |
| !! | ATTTAATCAATTCATTGAAA+AGG | - | Chr6:60183181-60183200 | None:intergenic | 15.0% |
| !! | TGAAAGTTGTATTATATTTA+TGG | + | Chr6:60184279-60184298 | MsG0680033235.01.T01:intron | 15.0% |
| !!! | ATACATAATTATTTTTTGTG+TGG | - | Chr6:60184235-60184254 | None:intergenic | 15.0% |
| !!! | TTTTTTTATGTTCATTTTTC+AGG | + | Chr6:60183226-60183245 | MsG0680033235.01.T01:intron | 15.0% |
| !! | AAAAATATACCCTTTGTAAA+TGG | + | Chr6:60181474-60181493 | MsG0680033235.01.T01:intron | 20.0% |
| !! | AAACATTGTTCAAATTTCAT+TGG | + | Chr6:60181987-60182006 | MsG0680033235.01.T01:intron | 20.0% |
| !! | AAATTAATGCTAAAAGGAAA+AGG | - | Chr6:60183579-60183598 | None:intergenic | 20.0% |
| !! | AAGAAAAAGATCTTTCATAT+AGG | - | Chr6:60181371-60181390 | None:intergenic | 20.0% |
| !! | AAGAAGAAAAAAAAACACAA+AGG | + | Chr6:60183636-60183655 | MsG0680033235.01.T01:intron | 20.0% |
| !! | AATGTTTGAAAATTCATGTT+AGG | - | Chr6:60182045-60182064 | None:intergenic | 20.0% |
| !! | ATAAACTAATGATATTTCCT+AGG | + | Chr6:60184362-60184381 | MsG0680033235.01.T01:CDS | 20.0% |
| !! | ATCCTTTAAATTAAATATGC+AGG | + | Chr6:60183956-60183975 | MsG0680033235.01.T01:intron | 20.0% |
| !! | CATAATTACTTCTTGATATT+TGG | + | Chr6:60183996-60184015 | MsG0680033235.01.T01:intron | 20.0% |
| !! | TAAACTAATGATATTTCCTA+GGG | + | Chr6:60184363-60184382 | MsG0680033235.01.T01:CDS | 20.0% |
| !!! | ACTATTTGATGATTTCTTTT+TGG | + | Chr6:60181275-60181294 | MsG0680033235.01.T01:intron | 20.0% |
| !!! | AGGATACAAATTTTTTTGTT+TGG | - | Chr6:60183489-60183508 | None:intergenic | 20.0% |
| !!! | ATCCTGCATATTTAATTTAA+AGG | - | Chr6:60183961-60183980 | None:intergenic | 20.0% |
| !!! | CTAACCTAAGTTTTAAATAT+TGG | - | Chr6:60183009-60183028 | None:intergenic | 20.0% |
| !!! | GATACAAATTTTTTTGTTTG+GGG | - | Chr6:60183487-60183506 | None:intergenic | 20.0% |
| !!! | GGATACAAATTTTTTTGTTT+GGG | - | Chr6:60183488-60183507 | None:intergenic | 20.0% |
| !!! | GTAACGATAATTTAAAATCA+TGG | - | Chr6:60182286-60182305 | None:intergenic | 20.0% |
| !!! | TAACGTATGTTTTTTTTTTC+AGG | + | Chr6:60183713-60183732 | MsG0680033235.01.T01:intron | 20.0% |
| !!! | TTCTTTTTGGTATAGAAAAA+AGG | + | Chr6:60181288-60181307 | MsG0680033235.01.T01:intron | 20.0% |
| ! | AAAAATTTGTATCCTTCCTT+AGG | + | Chr6:60183494-60183513 | MsG0680033235.01.T01:intron | 25.0% |
| ! | AACATATAGATCACATAGAT+AGG | - | Chr6:60183054-60183073 | None:intergenic | 25.0% |
| ! | AAGATATCTAACATAGATTG+AGG | - | Chr6:60181618-60181637 | None:intergenic | 25.0% |
| ! | AATATGTATCTATTAAGCTC+TGG | - | Chr6:60181561-60181580 | None:intergenic | 25.0% |
| ! | AATTACTTCTTGATATTTGG+AGG | + | Chr6:60183999-60184018 | MsG0680033235.01.T01:intron | 25.0% |
| ! | AGATATCTAACATAGATTGA+GGG | - | Chr6:60181617-60181636 | None:intergenic | 25.0% |
| ! | ATAAAGATAACAAACTAGAG+TGG | - | Chr6:60183345-60183364 | None:intergenic | 25.0% |
| ! | CAATCTATGTTAGATATCTT+AGG | + | Chr6:60181618-60181637 | MsG0680033235.01.T01:CDS | 25.0% |
| ! | CCATAAATTGACATTATCTA+CGG | + | Chr6:60181880-60181899 | MsG0680033235.01.T01:intron | 25.0% |
| ! | GTTCTTAAATTAGTCAAACT+TGG | + | Chr6:60181401-60181420 | MsG0680033235.01.T01:intron | 25.0% |
| ! | TATTATCAATATCCTAAGGA+AGG | - | Chr6:60183509-60183528 | None:intergenic | 25.0% |
| ! | TCACAAAGACAGAAAAAAAA+TGG | - | Chr6:60180910-60180929 | None:intergenic | 25.0% |
| !! | TCGCAATATAAAAGATTTTG+AGG | - | Chr6:60182389-60182408 | None:intergenic | 25.0% |
| !! | TTTTCAAACATTTGAACAGA+TGG | + | Chr6:60182053-60182072 | MsG0680033235.01.T01:intron | 25.0% |
| !!! | ACTCTAGTTTGTTATCTTTA+TGG | + | Chr6:60183344-60183363 | MsG0680033235.01.T01:intron | 25.0% |
| !!! | CACTAATCTTTTTTCACATT+TGG | + | Chr6:60182232-60182251 | MsG0680033235.01.T01:intron | 25.0% |
| !!! | CATTTTGAGTCAACTAATAA+AGG | + | Chr6:60182576-60182595 | MsG0680033235.01.T01:CDS | 25.0% |
| !!! | CTCTAGTTTGTTATCTTTAT+GGG | + | Chr6:60183345-60183364 | MsG0680033235.01.T01:intron | 25.0% |
| !!! | CTTTGGTTTTTCATGAAATT+TGG | - | Chr6:60181116-60181135 | None:intergenic | 25.0% |
| !!! | GAGTATTTTAAGCTTGTTTT+AGG | + | Chr6:60182147-60182166 | MsG0680033235.01.T01:CDS | 25.0% |
| !!! | TATTTTTGAGACAACTAGAT+TGG | + | Chr6:60183250-60183269 | MsG0680033235.01.T01:CDS | 25.0% |
| !!! | TTTTTCAAATCACACATACT+TGG | + | Chr6:60181510-60181529 | MsG0680033235.01.T01:CDS | 25.0% |
| AAATATGCAGGATAAGAGTT+TGG | + | Chr6:60183968-60183987 | MsG0680033235.01.T01:intron | 30.0% | |
| AAGGTTAATAGGTAGAGAAA+GGG | - | Chr6:60182175-60182194 | None:intergenic | 30.0% | |
| AATTAGTCAAACTTGGTATG+AGG | + | Chr6:60181408-60181427 | MsG0680033235.01.T01:intron | 30.0% | |
| ACAACTGAGTTTCTTAAACA+AGG | + | Chr6:60181089-60181108 | MsG0680033235.01.T01:CDS | 30.0% | |
| ACCCTAAATTATTGCATATG+CGG | + | Chr6:60182408-60182427 | MsG0680033235.01.T01:intron | 30.0% | |
| ACTCAAGATATGGAACTAAA+TGG | + | Chr6:60183305-60183324 | MsG0680033235.01.T01:CDS | 30.0% | |
| ATGCTGAAACCTTTATATTG+CGG | + | Chr6:60182310-60182329 | MsG0680033235.01.T01:intron | 30.0% | |
| CAAAATCTGATCTCTAATCA+TGG | - | Chr6:60181721-60181740 | None:intergenic | 30.0% | |
| CAATAGTTAATGGAGTTCTA+AGG | + | Chr6:60183276-60183295 | MsG0680033235.01.T01:CDS | 30.0% | |
| CATGTCTTTGTGAATTTCAT+TGG | - | Chr6:60182614-60182633 | None:intergenic | 30.0% | |
| CATTCAAGAGAAAACTAAAG+AGG | + | Chr6:60181800-60181819 | MsG0680033235.01.T01:CDS | 30.0% | |
| CCGTAGATAATGTCAATTTA+TGG | - | Chr6:60181883-60181902 | None:intergenic | 30.0% | |
| CTCATAAACTCATCAAGTTT+AGG | - | Chr6:60181744-60181763 | None:intergenic | 30.0% | |
| GAATTAAGGTATAGGAAGAA+AGG | + | Chr6:60181026-60181045 | MsG0680033235.01.T01:CDS | 30.0% | |
| GAGTGCTCAATTAAGAAATT+GGG | + | Chr6:60181761-60181780 | MsG0680033235.01.T01:CDS | 30.0% | |
| GGTGTATTATCAATATCCTA+AGG | - | Chr6:60183513-60183532 | None:intergenic | 30.0% | |
| GTGATTACACTTATGTATTC+TGG | + | Chr6:60182700-60182719 | MsG0680033235.01.T01:CDS | 30.0% | |
| TAATGCTAAAAGGAAAAGGA+AGG | - | Chr6:60183575-60183594 | None:intergenic | 30.0% | |
| TAGAACTCCATTAACTATTG+TGG | - | Chr6:60183276-60183295 | None:intergenic | 30.0% | |
| TCATGAAAAACCAAAGAACA+AGG | + | Chr6:60181120-60181139 | MsG0680033235.01.T01:CDS | 30.0% | |
| TCCGCATATGCAATAATTTA+GGG | - | Chr6:60182412-60182431 | None:intergenic | 30.0% | |
| TGAGTGCTCAATTAAGAAAT+TGG | + | Chr6:60181760-60181779 | MsG0680033235.01.T01:CDS | 30.0% | |
| TTGAGATCATTGGAATCAAT+TGG | - | Chr6:60183123-60183142 | None:intergenic | 30.0% | |
| ! | ATGTATTTAATGTGGATTGC+AGG | + | Chr6:60184320-60184339 | MsG0680033235.01.T01:CDS | 30.0% |
| ! | ATTTAGTTCCATATCTTGAG+TGG | - | Chr6:60183306-60183325 | None:intergenic | 30.0% |
| ! | CGTATTTTTCCGCAATATAA+AGG | - | Chr6:60182322-60182341 | None:intergenic | 30.0% |
| ! | GAAGTTTTTACCTTGTTCTT+TGG | - | Chr6:60181133-60181152 | None:intergenic | 30.0% |
| ! | GCGACCAATATTTAAAACTT+AGG | + | Chr6:60183002-60183021 | MsG0680033235.01.T01:intron | 30.0% |
| ! | TCCATGGATTGAATGTTAAT+GGG | - | Chr6:60183813-60183832 | None:intergenic | 30.0% |
| ! | TGAGATTTTCATCTTGCTAA+AGG | + | Chr6:60184410-60184429 | MsG0680033235.01.T01:CDS | 30.0% |
| ! | TTGGAATCAATTGGTTCATT+TGG | - | Chr6:60183114-60183133 | None:intergenic | 30.0% |
| AAAATCGACCAGATATCCAA+AGG | - | Chr6:60181923-60181942 | None:intergenic | 35.0% | |
| AAATCCTTCAGATATCCAGA+TGG | - | Chr6:60181947-60181966 | None:intergenic | 35.0% | |
| AAATTACTACCGTGGATTTC+AGG | + | Chr6:60182203-60182222 | MsG0680033235.01.T01:CDS | 35.0% | |
| AAGGAAAACCACTCAAGATA+TGG | + | Chr6:60183295-60183314 | MsG0680033235.01.T01:CDS | 35.0% | |
| AATCTCATGTGCAATCCATT+TGG | - | Chr6:60184397-60184416 | None:intergenic | 35.0% | |
| AATGGGTCAGGATACAAAAA+GGG | - | Chr6:60183796-60183815 | None:intergenic | 35.0% | |
| ACATATATTCTCCACCCTTT+AGG | - | Chr6:60183749-60183768 | None:intergenic | 35.0% | |
| ACCACCTTGTAACTAGATAT+AGG | + | Chr6:60184081-60184100 | MsG0680033235.01.T01:intron | 35.0% | |
| ACCCATTAACATTCAATCCA+TGG | + | Chr6:60183809-60183828 | MsG0680033235.01.T01:intron | 35.0% | |
| ACCTATATCTAGTTACAAGG+TGG | - | Chr6:60184085-60184104 | None:intergenic | 35.0% | |
| ACTATTTCACAATGTGTTGC+AGG | + | Chr6:60182534-60182553 | MsG0680033235.01.T01:intron | 35.0% | |
| ATATACCCTTTGTAAATGGC+AGG | + | Chr6:60181478-60181497 | MsG0680033235.01.T01:intron | 35.0% | |
| ATCTGATCTCTAATCATGGT+AGG | - | Chr6:60181717-60181736 | None:intergenic | 35.0% | |
| CAATCTGCTTCAAAGATAAG+AGG | - | Chr6:60182083-60182102 | None:intergenic | 35.0% | |
| CAGGCTATTTGATTCCTAAA+GGG | + | Chr6:60183732-60183751 | MsG0680033235.01.T01:intron | 35.0% | |
| CAGTCCTACAATTGTTTCAA+TGG | + | Chr6:60181533-60181552 | MsG0680033235.01.T01:CDS | 35.0% | |
| CCAATGATCTCAAATCAATG+AGG | + | Chr6:60183130-60183149 | MsG0680033235.01.T01:CDS | 35.0% | |
| CGGAAAAATACGAGAAAAGA+TGG | + | Chr6:60182330-60182349 | MsG0680033235.01.T01:intron | 35.0% | |
| CTCACCTATATCTAGTTACA+AGG | - | Chr6:60184088-60184107 | None:intergenic | 35.0% | |
| GAAAGAATCAGCTATTGTTG+AGG | - | Chr6:60182121-60182140 | None:intergenic | 35.0% | |
| GAAATTCACAAAGACATGCT+TGG | + | Chr6:60182616-60182635 | MsG0680033235.01.T01:CDS | 35.0% | |
| GAAGGTTAATAGGTAGAGAA+AGG | - | Chr6:60182176-60182195 | None:intergenic | 35.0% | |
| GAATTGATGTGCAAATTGAC+AGG | - | Chr6:60183534-60183553 | None:intergenic | 35.0% | |
| GGATCCATTGAAACAATTGT+AGG | - | Chr6:60181540-60181559 | None:intergenic | 35.0% | |
| GGTGGAATGAATTAAGGTAT+AGG | + | Chr6:60181018-60181037 | MsG0680033235.01.T01:CDS | 35.0% | |
| GTCCGCATATGCAATAATTT+AGG | - | Chr6:60182413-60182432 | None:intergenic | 35.0% | |
| TAACATTCAATCCATGGAGA+TGG | + | Chr6:60183815-60183834 | MsG0680033235.01.T01:intron | 35.0% | |
| TACTTCTTGATATTTGGAGG+TGG | + | Chr6:60184002-60184021 | MsG0680033235.01.T01:intron | 35.0% | |
| TCAATTTATGGTTCGATGTC+TGG | - | Chr6:60181871-60181890 | None:intergenic | 35.0% | |
| TCAGGCTATTTGATTCCTAA+AGG | + | Chr6:60183731-60183750 | MsG0680033235.01.T01:intron | 35.0% | |
| TCTGATCTCTAATCATGGTA+GGG | - | Chr6:60181716-60181735 | None:intergenic | 35.0% | |
| TCTTGAGGTGGAATGAATTA+AGG | + | Chr6:60181012-60181031 | MsG0680033235.01.T01:CDS | 35.0% | |
| TGACATTATCTACGGTTTGA+CGG | + | Chr6:60181888-60181907 | MsG0680033235.01.T01:intron | 35.0% | |
| TGTAATATTGCAGCTGTTCA+TGG | + | Chr6:60181645-60181664 | MsG0680033235.01.T01:CDS | 35.0% | |
| TGTTTCAACCACATCAATGA+TGG | + | Chr6:60182732-60182751 | MsG0680033235.01.T01:CDS | 35.0% | |
| ! | AGATTGGCCACAATAGTTAA+TGG | + | Chr6:60183266-60183285 | MsG0680033235.01.T01:CDS | 35.0% |
| ! | ATTTAATGTGGATTGCAGGT+GGG | + | Chr6:60184324-60184343 | MsG0680033235.01.T01:CDS | 35.0% |
| ! | CTCCATGGATTGAATGTTAA+TGG | - | Chr6:60183814-60183833 | None:intergenic | 35.0% |
| ! | CTTAGTTCTTCAAGAGCTTT+GGG | - | Chr6:60182781-60182800 | None:intergenic | 35.0% |
| ! | GAAGGATTTGATGTCTTGTT+CGG | + | Chr6:60181958-60181977 | MsG0680033235.01.T01:intron | 35.0% |
| ! | TAATGGGTCAGGATACAAAA+AGG | - | Chr6:60183797-60183816 | None:intergenic | 35.0% |
| ! | TATTTAATGTGGATTGCAGG+TGG | + | Chr6:60184323-60184342 | MsG0680033235.01.T01:CDS | 35.0% |
| ! | TCTTAGTTCTTCAAGAGCTT+TGG | - | Chr6:60182782-60182801 | None:intergenic | 35.0% |
| ! | TTTTCCATCTGGATATCTGA+AGG | + | Chr6:60181940-60181959 | MsG0680033235.01.T01:intron | 35.0% |
| !! | CCTCATTGATTTGAGATCAT+TGG | - | Chr6:60183133-60183152 | None:intergenic | 35.0% |
| !! | TATGTTGCAGAAAGAGCATT+TGG | + | Chr6:60183068-60183087 | MsG0680033235.01.T01:intron | 35.0% |
| !! | TCAGTTGTTTCTCCAAAAAC+TGG | - | Chr6:60181077-60181096 | None:intergenic | 35.0% |
| !!! | AGACATGCTTGGTTTTTTGA+TGG | + | Chr6:60182627-60182646 | MsG0680033235.01.T01:CDS | 35.0% |
| !!! | GGTTTTTTCCTTTGGATATC+TGG | + | Chr6:60181912-60181931 | MsG0680033235.01.T01:intron | 35.0% |
| ACTTTGTCCAGGAAAAGAGT+TGG | + | Chr6:60184031-60184050 | MsG0680033235.01.T01:intron | 40.0% | |
| ATCAATGAGGTTTACTCGTG+CGG | + | Chr6:60183143-60183162 | MsG0680033235.01.T01:CDS | 40.0% | |
| ATTCAATCCATGGAGATGGA+TGG | + | Chr6:60183819-60183838 | MsG0680033235.01.T01:intron | 40.0% | |
| ATTGCCATGAAAAACGCCAT+TGG | - | Chr6:60180954-60180973 | None:intergenic | 40.0% | |
| CTTTGTCCAGGAAAAGAGTT+GGG | + | Chr6:60184032-60184051 | MsG0680033235.01.T01:intron | 40.0% | |
| GCTATTTGATTCCTAAAGGG+TGG | + | Chr6:60183735-60183754 | MsG0680033235.01.T01:intron | 40.0% | |
| GGCAATTGTTGGTGTATTCT+TGG | + | Chr6:60180968-60180987 | MsG0680033235.01.T01:CDS | 40.0% | |
| GTGATCAAACCTGAAATCCA+CGG | - | Chr6:60182215-60182234 | None:intergenic | 40.0% | |
| TCCACTCATAAGTACATGAG+AGG | + | Chr6:60181669-60181688 | MsG0680033235.01.T01:CDS | 40.0% | |
| TCCTCTCATGTACTTATGAG+TGG | - | Chr6:60181673-60181692 | None:intergenic | 40.0% | |
| TCTCTACCTATTAACCTTCC+TGG | + | Chr6:60182177-60182196 | MsG0680033235.01.T01:CDS | 40.0% | |
| TTTGTGCCAGGAAGGTTAAT+AGG | - | Chr6:60182186-60182205 | None:intergenic | 40.0% | |
| ! | CCAAACCTGCCATTTACAAA+GGG | - | Chr6:60181486-60181505 | None:intergenic | 40.0% |
| ! | GCGTTTTTCATGGCAATTGT+TGG | + | Chr6:60180957-60180976 | MsG0680033235.01.T01:CDS | 40.0% |
| ! | GGATTGAATGTTAATGGGTC+AGG | - | Chr6:60183808-60183827 | None:intergenic | 40.0% |
| ! | GGTTGATGCAGTTGAAATTG+TGG | + | Chr6:60182351-60182370 | MsG0680033235.01.T01:intron | 40.0% |
| ! | TCCAAACCTGCCATTTACAA+AGG | - | Chr6:60181487-60181506 | None:intergenic | 40.0% |
| !! | AACATAGATTGAGGGTATCC+AGG | - | Chr6:60181609-60181628 | None:intergenic | 40.0% |
| !! | ATCTGGTCGATTTTTCCATC+TGG | + | Chr6:60181929-60181948 | MsG0680033235.01.T01:intron | 40.0% |
| !! | GAATCAAAAGGTCTTGTTCC+TGG | + | Chr6:60181588-60181607 | MsG0680033235.01.T01:CDS | 40.0% |
| !! | TGGCTTTTTCCTCTCTCTTA+TGG | - | Chr6:60183094-60183113 | None:intergenic | 40.0% |
| !!! | TTGACGGAGGTTTTTTCCTT+TGG | + | Chr6:60181904-60181923 | MsG0680033235.01.T01:intron | 40.0% |
| AGCATTTGGCCATAAGAGAG+AGG | + | Chr6:60183082-60183101 | MsG0680033235.01.T01:CDS | 45.0% | |
| AGGAAGAAAGGTTTGCCACT+TGG | + | Chr6:60181038-60181057 | MsG0680033235.01.T01:CDS | 45.0% | |
| ATTGCAGGTGGGAAGAAGTA+GGG | + | Chr6:60184335-60184354 | MsG0680033235.01.T01:CDS | 45.0% | |
| CATTATCTACGGTTTGACGG+AGG | + | Chr6:60181891-60181910 | MsG0680033235.01.T01:intron | 45.0% | |
| CCCTTTGTAAATGGCAGGTT+TGG | + | Chr6:60181483-60181502 | MsG0680033235.01.T01:intron | 45.0% | |
| CTTCACAGCCATCATTGATG+TGG | - | Chr6:60182743-60182762 | None:intergenic | 45.0% | |
| GTACTAACCATCCATCTCCA+TGG | - | Chr6:60183829-60183848 | None:intergenic | 45.0% | |
| TTCACAATGTGTTGCAGGCA+AGG | + | Chr6:60182539-60182558 | MsG0680033235.01.T01:intron | 45.0% | |
| ! | AGCACCAATGGCGTTTTTCA+TGG | + | Chr6:60180947-60180966 | MsG0680033235.01.T01:exon | 45.0% |
| ! | AGGTTTGCCACTTGGAACAA+TGG | + | Chr6:60181046-60181065 | MsG0680033235.01.T01:CDS | 45.0% |
| ! | GGTAGTAATTTGTGCCAGGA+AGG | - | Chr6:60182194-60182213 | None:intergenic | 45.0% |
| ! | GGTTTGCCACTTGGAACAAT+GGG | + | Chr6:60181047-60181066 | MsG0680033235.01.T01:CDS | 45.0% |
| ! | GTGATTCCCAACTCTTTTCC+TGG | - | Chr6:60184041-60184060 | None:intergenic | 45.0% |
| ! | GTTTGCCACTTGGAACAATG+GGG | + | Chr6:60181048-60181067 | MsG0680033235.01.T01:CDS | 45.0% |
| ! | GTTTTTGCTCTGCTCTCTTG+AGG | + | Chr6:60180997-60181016 | MsG0680033235.01.T01:CDS | 45.0% |
| !! | GTTCTTCAAGAGCTTTGGGA+TGG | - | Chr6:60182777-60182796 | None:intergenic | 45.0% |
| !! | GTTTGAAGTGAGAGCACCAA+TGG | + | Chr6:60180935-60180954 | MsG0680033235.01.T01:exon | 45.0% |
| !! | AATATAATTGTATTAAATAA+AGG | + | Chr6:60182852-60182871 | MsG0680033235.01.T01:intron | 5.0% |
| CCTAGGGTTCAAGCACCAAA+TGG | + | Chr6:60184379-60184398 | MsG0680033235.01.T01:CDS | 50.0% | |
| CCTGGCACAAATTACTACCG+TGG | + | Chr6:60182195-60182214 | MsG0680033235.01.T01:CDS | 50.0% | |
| GATTGCAGGTGGGAAGAAGT+AGG | + | Chr6:60184334-60184353 | MsG0680033235.01.T01:CDS | 50.0% | |
| TTGCAGGTGGGAAGAAGTAG+GGG | + | Chr6:60184336-60184355 | MsG0680033235.01.T01:CDS | 50.0% | |
| TTTGCTCTGCTCTCTTGAGG+TGG | + | Chr6:60181000-60181019 | MsG0680033235.01.T01:CDS | 50.0% | |
| ! | ACAATGGGGTGGCCAGTTTT+TGG | + | Chr6:60181062-60181081 | MsG0680033235.01.T01:CDS | 50.0% |
| ! | CCACGGTAGTAATTTGTGCC+AGG | - | Chr6:60182198-60182217 | None:intergenic | 50.0% |
| !! | CAAGAGCTTTGGGATGGTCA+TGG | - | Chr6:60182771-60182790 | None:intergenic | 50.0% |
| !! | CCATTTGGTGCTTGAACCCT+AGG | - | Chr6:60184382-60184401 | None:intergenic | 50.0% |
| ATTGGTCGCGTCGCGATTCT+AGG | - | Chr6:60182991-60183010 | None:intergenic | 55.0% | |
| GGTGGCACTAGACTTTGTCC+AGG | + | Chr6:60184020-60184039 | MsG0680033235.01.T01:intron | 55.0% | |
| TGCAGGTGGGAAGAAGTAGG+GGG | + | Chr6:60184337-60184356 | MsG0680033235.01.T01:CDS | 55.0% | |
| ! | TGCCACTTGGAACAATGGGG+TGG | + | Chr6:60181051-60181070 | MsG0680033235.01.T01:CDS | 55.0% |
| !! | GAGCTTTGGGATGGTCATGG+AGG | - | Chr6:60182768-60182787 | None:intergenic | 55.0% |
| GGCCACCCCATTGTTCCAAG+TGG | - | Chr6:60181056-60181075 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 60180882 | 60184429 | 60180882 | ID=MsG0680033235.01;Name=MsG0680033235.01 |
| Chr6 | mRNA | 60180882 | 60184429 | 60180882 | ID=MsG0680033235.01.T01;Parent=MsG0680033235.01;Name=MsG0680033235.01.T01;_AED=0.49;_eAED=0.50;_QI=72|0.85|0.75|1|0.71|0.75|8|0|412 |
| Chr6 | exon | 60184285 | 60184429 | 60184285 | ID=MsG0680033235.01.T01:exon:19472;Parent=MsG0680033235.01.T01 |
| Chr6 | exon | 60183735 | 60183753 | 60183735 | ID=MsG0680033235.01.T01:exon:19471;Parent=MsG0680033235.01.T01 |
| Chr6 | exon | 60183248 | 60183326 | 60183248 | ID=MsG0680033235.01.T01:exon:19470;Parent=MsG0680033235.01.T01 |
| Chr6 | exon | 60183078 | 60183164 | 60183078 | ID=MsG0680033235.01.T01:exon:19469;Parent=MsG0680033235.01.T01 |
| Chr6 | exon | 60182556 | 60182801 | 60182556 | ID=MsG0680033235.01.T01:exon:19468;Parent=MsG0680033235.01.T01 |
| Chr6 | exon | 60182072 | 60182224 | 60182072 | ID=MsG0680033235.01.T01:exon:19467;Parent=MsG0680033235.01.T01 |
| Chr6 | exon | 60181500 | 60181821 | 60181500 | ID=MsG0680033235.01.T01:exon:19466;Parent=MsG0680033235.01.T01 |
| Chr6 | exon | 60180882 | 60181141 | 60180882 | ID=MsG0680033235.01.T01:exon:19465;Parent=MsG0680033235.01.T01 |
| Chr6 | five_prime_UTR | 60180882 | 60180953 | 60180882 | ID=MsG0680033235.01.T01:five_prime_utr;Parent=MsG0680033235.01.T01 |
| Chr6 | CDS | 60180954 | 60181141 | 60180954 | ID=MsG0680033235.01.T01:cds;Parent=MsG0680033235.01.T01 |
| Chr6 | CDS | 60181500 | 60181821 | 60181500 | ID=MsG0680033235.01.T01:cds;Parent=MsG0680033235.01.T01 |
| Chr6 | CDS | 60182072 | 60182224 | 60182072 | ID=MsG0680033235.01.T01:cds;Parent=MsG0680033235.01.T01 |
| Chr6 | CDS | 60182556 | 60182801 | 60182556 | ID=MsG0680033235.01.T01:cds;Parent=MsG0680033235.01.T01 |
| Chr6 | CDS | 60183078 | 60183164 | 60183078 | ID=MsG0680033235.01.T01:cds;Parent=MsG0680033235.01.T01 |
| Chr6 | CDS | 60183248 | 60183326 | 60183248 | ID=MsG0680033235.01.T01:cds;Parent=MsG0680033235.01.T01 |
| Chr6 | CDS | 60183735 | 60183753 | 60183735 | ID=MsG0680033235.01.T01:cds;Parent=MsG0680033235.01.T01 |
| Chr6 | CDS | 60184285 | 60184429 | 60184285 | ID=MsG0680033235.01.T01:cds;Parent=MsG0680033235.01.T01 |
| Gene Sequence |
| Protein sequence |
