AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680033343.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 105 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACAGTTCTTTGCAATTTC+AGG 0.167918 6:-62749975 MsG0680033343.01.T01:five_prime_UTR
AAATATAGATTTGGATTTAA+TGG 0.180402 6:-62745425 MsG0680033343.01.T01:CDS
CTCCATACTTTGTTCATCAT+TGG 0.213216 6:+62748225 None:intergenic
TTCAAAGGGATGTTTATATT+TGG 0.240479 6:-62748886 MsG0680033343.01.T01:intron
GAGAGGTTGAGGCGCGTTTA+AGG 0.254606 6:-62745531 MsG0680033343.01.T01:CDS
AATGCAAAGGGTAGAGTATA+TGG 0.262241 6:-62745646 MsG0680033343.01.T01:CDS
TCAAGCTTTCTATAATCTTT+TGG 0.266470 6:-62748182 MsG0680033343.01.T01:CDS
GATGGTGCAGGTTGTGTTAA+AGG 0.268173 6:+62748331 None:intergenic
TCCATACTTTGTTCATCATT+GGG 0.268760 6:+62748226 None:intergenic
CGAGTGAGAGATGGAATTTA+TGG 0.275263 6:+62750094 None:intergenic
CTATTAACTTATACTCGATA+TGG 0.275641 6:-62749754 MsG0680033343.01.T01:five_prime_UTR
ATAGAGAATGGATGTATTAT+AGG 0.276109 6:-62748594 MsG0680033343.01.T01:five_prime_UTR
GTGAACAGGAGGCAACTATT+AGG 0.318451 6:-62747318 MsG0680033343.01.T01:CDS
CCCCAATGATGAACAAAGTA+TGG 0.321084 6:-62748227 MsG0680033343.01.T01:CDS
TTAGTTGATTCTTAGATCCT+TGG 0.322858 6:+62747095 None:intergenic
AATTTCCACACCCTCATAAA+AGG 0.327078 6:+62748540 None:intergenic
AGTGTAAGTGTTTGGTGTTT+AGG 0.328271 6:-62748635 MsG0680033343.01.T01:five_prime_UTR
GTTCTTTGCAATTTCAGGTT+TGG 0.333054 6:-62749970 MsG0680033343.01.T01:five_prime_UTR
CATTGTATGAGAAAAGAAAA+TGG 0.349417 6:+62748699 None:intergenic
TAAACATGCAAATATAGATT+TGG 0.354681 6:-62745434 MsG0680033343.01.T01:CDS
GATGTTTATATTTGGTGGTC+TGG 0.358474 6:-62748878 MsG0680033343.01.T01:five_prime_UTR
ACAAACAATCGATTCCATTA+AGG 0.358541 6:-62745488 MsG0680033343.01.T01:CDS
CACAGCTTCAGTAATCCATT+TGG 0.367414 6:+62747219 None:intergenic
CTACAAATGGATTGGTGAAC+AGG 0.367995 6:-62747332 MsG0680033343.01.T01:CDS
TCAGCTTCATTCCTCAATAT+AGG 0.376022 6:-62749932 MsG0680033343.01.T01:five_prime_UTR
TAGTTGATTCTTAGATCCTT+GGG 0.378840 6:+62747096 None:intergenic
ACTAAAGCATGAACTTGAAT+TGG 0.381714 6:-62747077 MsG0680033343.01.T01:intron
ATCACAATCGCCTTTGTTTG+AGG 0.384332 6:-62748155 MsG0680033343.01.T01:CDS
AAGTGATCTCTCACATCATC+TGG 0.395724 6:+62748424 None:intergenic
TGGAATTTATGGAGGGTTGT+GGG 0.410021 6:+62750105 None:intergenic
ACAGCTTCAGTAATCCATTT+GGG 0.422196 6:+62747220 None:intergenic
ACTTATATAAGAAAGGGTTT+AGG 0.423617 6:-62748405 MsG0680033343.01.T01:five_prime_UTR
TGAACAGGAGGCAACTATTA+GGG 0.425593 6:-62747317 MsG0680033343.01.T01:CDS
TCTTAAGTAGTGTAAGTGTT+TGG 0.429061 6:-62748643 MsG0680033343.01.T01:five_prime_UTR
TTAGATCAATTTAAGAATGA+AGG 0.429503 6:-62748496 MsG0680033343.01.T01:five_prime_UTR
GGATCTACTAAGAAAGATAA+TGG 0.430569 6:-62747272 MsG0680033343.01.T01:CDS
GATATGGATTTGAATGTTTG+AGG 0.435646 6:-62749738 MsG0680033343.01.T01:five_prime_UTR
TAGAGAATGGATGTATTATA+GGG 0.436271 6:-62748593 MsG0680033343.01.T01:five_prime_UTR
TCACAATCGCCTTTGTTTGA+GGG 0.436297 6:-62748154 MsG0680033343.01.T01:CDS
AAAGGGATGTTTATATTTGG+TGG 0.442650 6:-62748883 MsG0680033343.01.T01:intron
GTCTGGTTTGGTTGTTCTGT+AGG 0.445010 6:-62748861 MsG0680033343.01.T01:five_prime_UTR
TTATATTTGGTGGTCTGGTT+TGG 0.445275 6:-62748873 MsG0680033343.01.T01:five_prime_UTR
ATTAGTGTATCATAATCAAT+AGG 0.448901 6:+62745691 None:intergenic
GAAAGCTTGAGTCTCTTCAT+TGG 0.454870 6:+62748195 None:intergenic
CAACATCCAAAGCGTAATAC+TGG 0.456119 6:-62749542 MsG0680033343.01.T01:five_prime_UTR
ATGGAATTTATGGAGGGTTG+TGG 0.458163 6:+62750104 None:intergenic
GGAATGAAGCTGAGAAAGAA+AGG 0.462259 6:+62749942 None:intergenic
AAAGCTTGAGTCTCTTCATT+GGG 0.468849 6:+62748196 None:intergenic
AGAGATCACTTATATAAGAA+AGG 0.471125 6:-62748412 MsG0680033343.01.T01:five_prime_UTR
CATACACCAGTATTACGCTT+TGG 0.475893 6:+62749536 None:intergenic
ATGGACTTGCAGGGAAGTTG+TGG 0.491239 6:-62748797 MsG0680033343.01.T01:five_prime_UTR
CACAATCGCCTTTGTTTGAG+GGG 0.492297 6:-62748153 MsG0680033343.01.T01:CDS
AAGGGTAGAGTATATGGGCT+TGG 0.493623 6:-62745640 MsG0680033343.01.T01:intron
GGCACAATTGCTTGCAATGT+GGG 0.504123 6:-62747194 MsG0680033343.01.T01:CDS
TGTATCATAATCAATAGGCT+TGG 0.504722 6:+62745696 None:intergenic
GTATCATAATCAATAGGCTT+GGG 0.509867 6:+62745697 None:intergenic
ATCATATGAGCAGATGGTAA+TGG 0.510417 6:-62748272 MsG0680033343.01.T01:exon
TGTGTTAAAGGAACCGATGC+AGG 0.511201 6:+62748343 None:intergenic
TGGTATGAGTGGAGAGGTTG+AGG 0.514731 6:-62745542 MsG0680033343.01.T01:intron
ATGTGTCCGCACATAGAGAA+TGG 0.519083 6:-62748606 MsG0680033343.01.T01:five_prime_UTR
ATATGGATTTGAATGTTTGA+GGG 0.520629 6:-62749737 MsG0680033343.01.T01:five_prime_UTR
AGAGAATATCACCTATATTG+AGG 0.521853 6:+62749921 None:intergenic
ATGCAAAGGGTAGAGTATAT+GGG 0.526831 6:-62745645 MsG0680033343.01.T01:CDS
GAGATCACTTATATAAGAAA+GGG 0.527901 6:-62748411 MsG0680033343.01.T01:five_prime_UTR
GTGAGAGATGGAATTTATGG+AGG 0.528560 6:+62750097 None:intergenic
TATTATAGGGTTCTACCTGA+TGG 0.530598 6:-62748580 MsG0680033343.01.T01:five_prime_UTR
GAGTAGTTTGAAATCAATGA+GGG 0.530642 6:-62749568 MsG0680033343.01.T01:five_prime_UTR
CTTAACATCATATGAGCAGA+TGG 0.534549 6:-62748278 MsG0680033343.01.T01:exon
ACACTAATGATTGAAGCTGT+TGG 0.537396 6:-62745676 MsG0680033343.01.T01:CDS
CCATACTTTGTTCATCATTG+GGG 0.552898 6:+62748227 None:intergenic
CTAATGATTGAAGCTGTTGG+AGG 0.555236 6:-62745673 MsG0680033343.01.T01:CDS
ATTTGCATGTTTAGCAAATG+CGG 0.555380 6:+62745444 None:intergenic
TGCAAATGTTGGTGCTGATG+TGG 0.559498 6:-62745353 MsG0680033343.01.T01:CDS
GAATGTTTGAGGGAAGAAAG+AGG 0.559677 6:-62749727 MsG0680033343.01.T01:five_prime_UTR
AGGCAACTATTAGGGCCACA+TGG 0.561815 6:-62747309 MsG0680033343.01.T01:CDS
AGTAATCGTGATTCAGATGT+CGG 0.565082 6:-62747133 MsG0680033343.01.T01:CDS
CACATGGGAATCAAAAGCTA+AGG 0.571102 6:-62747293 MsG0680033343.01.T01:CDS
GCGATTGAACGAGTGAGAGA+TGG 0.574159 6:+62750085 None:intergenic
TGGGGAAGAAATACCTGCAT+CGG 0.582978 6:-62748356 MsG0680033343.01.T01:five_prime_UTR
CTACTGCACCCCTCAAACAA+AGG 0.591087 6:+62748145 None:intergenic
GGAGTAGTTTGAAATCAATG+AGG 0.591995 6:-62749569 MsG0680033343.01.T01:five_prime_UTR
GGAGGTTCATTGCACACCCA+AGG 0.595430 6:-62747112 MsG0680033343.01.T01:CDS
TAGGGTTCTACCTGATGGAG+TGG 0.598380 6:-62748575 MsG0680033343.01.T01:five_prime_UTR
TGAGCAGATGGTAATGGATG+TGG 0.606663 6:-62748266 MsG0680033343.01.T01:exon
TGAGAGATGGAATTTATGGA+GGG 0.607743 6:+62750098 None:intergenic
CATACTTTGTTCATCATTGG+GGG 0.611583 6:+62748228 None:intergenic
GGCAACTATTAGGGCCACAT+GGG 0.615938 6:-62747308 MsG0680033343.01.T01:CDS
CGTGGAAGCAATGCAAATGT+TGG 0.616233 6:-62745364 MsG0680033343.01.T01:CDS
TGTTGGAGGAAGAAATGCAA+AGG 0.632509 6:-62745659 MsG0680033343.01.T01:CDS
ATGGATTACTGAAGCTGTGT+GGG 0.633622 6:-62747215 MsG0680033343.01.T01:CDS
AGACAATCACATATCAAGCA+TGG 0.633718 6:+62748460 None:intergenic
ATACATCCATTCTCTATGTG+CGG 0.634471 6:+62748600 None:intergenic
TCTGTTGATAATGCTACTCG+TGG 0.635589 6:-62745382 MsG0680033343.01.T01:CDS
GTTGGAGGAAGAAATGCAAA+GGG 0.639504 6:-62745658 MsG0680033343.01.T01:CDS
CAAATGGATTGGTGAACAGG+AGG 0.645056 6:-62747329 MsG0680033343.01.T01:CDS
AGGGTTCTACCTGATGGAGT+GGG 0.646917 6:-62748574 MsG0680033343.01.T01:five_prime_UTR
GGGCACAATTGCTTGCAATG+TGG 0.647113 6:-62747195 MsG0680033343.01.T01:CDS
TTACATTACAAATAGATGTG+TGG 0.670020 6:-62747161 MsG0680033343.01.T01:CDS
CAGATGGTAATGGATGTGGC+AGG 0.676081 6:-62748262 MsG0680033343.01.T01:CDS
CAATGATGAACAAAGTATGG+AGG 0.691247 6:-62748224 MsG0680033343.01.T01:CDS
AATCGTGATTCAGATGTCGG+AGG 0.698344 6:-62747130 MsG0680033343.01.T01:CDS
GCACAATTGCTTGCAATGTG+GGG 0.698795 6:-62747193 MsG0680033343.01.T01:CDS
AATGGATTACTGAAGCTGTG+TGG 0.699938 6:-62747216 MsG0680033343.01.T01:CDS
GAGGCTGGTAATGATGAGAG+TGG 0.714932 6:-62745727 MsG0680033343.01.T01:CDS
TTACCAGCCTCAAAATGACG+AGG 0.751905 6:+62745739 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAGATTTGGATTTAA+TGG - Chr6:62750038-62750057 MsG0680033343.01.T01:five_prime_UTR 15.0%
!! AATAACTGAATAAATAAGAT+AGG + Chr6:62749655-62749674 None:intergenic 15.0%
!! ATGATAAAATAAAAGAAATG+TGG - Chr6:62747994-62748013 MsG0680033343.01.T01:intron 15.0%
!!! ATTTTTTGATTTTGATGAAA+TGG - Chr6:62745597-62745616 MsG0680033343.01.T01:intron 15.0%
!!! TACAACATTTTTTTTATGAA+GGG - Chr6:62745873-62745892 MsG0680033343.01.T01:intron 15.0%
!!! TTAGGACAAATTATTTTTAT+TGG - Chr6:62747076-62747095 MsG0680033343.01.T01:intron 15.0%
!!! TTTGTTGAAATTTTGATTTT+TGG - Chr6:62745621-62745640 MsG0680033343.01.T01:intron 15.0%
!!! TTTTTTGATTTTGATGAAAT+GGG - Chr6:62745598-62745617 MsG0680033343.01.T01:intron 15.0%
!! ACTTCAATTTATAATCCAAA+AGG + Chr6:62746050-62746069 None:intergenic 20.0%
!! ATCTTACTGATAACAAAATT+TGG - Chr6:62747747-62747766 MsG0680033343.01.T01:intron 20.0%
!! ATGAATATCAATGAAATCAA+AGG + Chr6:62749157-62749176 None:intergenic 20.0%
!! ATGCATATAATATCAACAAT+TGG - Chr6:62748846-62748865 MsG0680033343.01.T01:five_prime_UTR 20.0%
!! ATTAGTGTATCATAATCAAT+AGG + Chr6:62749775-62749794 None:intergenic 20.0%
!! ATTTGGATTTATACTCTTAA+AGG - Chr6:62747764-62747783 MsG0680033343.01.T01:intron 20.0%
!! CAAAAACTAAAGTAGATAAA+AGG + Chr6:62749405-62749424 None:intergenic 20.0%
!! CTTCAATTTATAATCCAAAA+GGG + Chr6:62746049-62746068 None:intergenic 20.0%
!! TAAACATGCAAATATAGATT+TGG - Chr6:62750029-62750048 MsG0680033343.01.T01:five_prime_UTR 20.0%
!! TGAATATCAATGAAATCAAA+GGG + Chr6:62749156-62749175 None:intergenic 20.0%
!! TGTATCATCAAAAAAAAATC+TGG + Chr6:62746743-62746762 None:intergenic 20.0%
!! TTAGATCAATTTAAGAATGA+AGG - Chr6:62746967-62746986 MsG0680033343.01.T01:intron 20.0%
!! TTGTTTGACAGATATATTAT+CGG - Chr6:62749370-62749389 MsG0680033343.01.T01:intron 20.0%
!! TTTCTGCAATTATTGAAAAT+GGG + Chr6:62748109-62748128 None:intergenic 20.0%
!!! ACATTTTAGCTTAAAATTAG+TGG + Chr6:62746133-62746152 None:intergenic 20.0%
!!! ACATTTTTTCTTTTGTTCAT+TGG + Chr6:62746355-62746374 None:intergenic 20.0%
!!! ATTTCAAGCATTTTTTTTTG+TGG + Chr6:62745795-62745814 None:intergenic 20.0%
!!! CTTTTATCTACTTTAGTTTT+TGG - Chr6:62749403-62749422 MsG0680033343.01.T01:intron 20.0%
!!! GTACAACATTTTTTTTATGA+AGG - Chr6:62745872-62745891 MsG0680033343.01.T01:intron 20.0%
!!! GTATTTTTGTTTTCATGTAA+AGG - Chr6:62745986-62746005 MsG0680033343.01.T01:intron 20.0%
!!! TAATCTGCAAATTGATAATT+TGG - Chr6:62746468-62746487 MsG0680033343.01.T01:intron 20.0%
!!! TTTTCTGCAATTATTGAAAA+TGG + Chr6:62748110-62748129 None:intergenic 20.0%
! AACATTTCCAATTGTTGTAA+GGG + Chr6:62747971-62747990 None:intergenic 25.0%
! AATTGCAGAAAAACTACAAA+TGG - Chr6:62748118-62748137 MsG0680033343.01.T01:CDS 25.0%
! ACTTATATAAGAAAGGGTTT+AGG - Chr6:62747058-62747077 MsG0680033343.01.T01:intron 25.0%
! AGAGATCACTTATATAAGAA+AGG - Chr6:62747051-62747070 MsG0680033343.01.T01:intron 25.0%
! ATAGAGAATGGATGTATTAT+AGG - Chr6:62746869-62746888 MsG0680033343.01.T01:intron 25.0%
! ATATACCTCTCAGATTAATT+GGG + Chr6:62749090-62749109 None:intergenic 25.0%
! ATATCATTGCATTTATTTGC+TGG + Chr6:62746185-62746204 None:intergenic 25.0%
! ATATGGATTTGAATGTTTGA+GGG - Chr6:62745726-62745745 MsG0680033343.01.T01:CDS 25.0%
! CAAGAAAATATTGTCTACTA+GGG - Chr6:62749120-62749139 MsG0680033343.01.T01:intron 25.0%
! CATGTATTGCCTTTATAATT+TGG - Chr6:62749552-62749571 MsG0680033343.01.T01:five_prime_UTR 25.0%
! CATGTGCATTAAAAACTTTA+TGG + Chr6:62746093-62746112 None:intergenic 25.0%
! CATTGTATGAGAAAAGAAAA+TGG + Chr6:62746767-62746786 None:intergenic 25.0%
! CTATTAACTTATACTCGATA+TGG - Chr6:62745709-62745728 MsG0680033343.01.T01:CDS 25.0%
! GAGATCACTTATATAAGAAA+GGG - Chr6:62747052-62747071 MsG0680033343.01.T01:intron 25.0%
! GCAATTAAATCTATCTTTGA+TGG - Chr6:62747945-62747964 MsG0680033343.01.T01:intron 25.0%
! GTTAATTCATGTGTTGAATT+TGG - Chr6:62747879-62747898 MsG0680033343.01.T01:intron 25.0%
! TAGAGAATGGATGTATTATA+GGG - Chr6:62746870-62746889 MsG0680033343.01.T01:intron 25.0%
! TATGAATCTAGTAATGTATG+AGG - Chr6:62749484-62749503 MsG0680033343.01.T01:intron 25.0%
! TTAAAAACTTTATGGCAAAC+AGG + Chr6:62746085-62746104 None:intergenic 25.0%
! TTAATGTTTCTTAGAAGAAG+AGG + Chr6:62746544-62746563 None:intergenic 25.0%
! TTACATTACAAATAGATGTG+TGG - Chr6:62748302-62748321 MsG0680033343.01.T01:five_prime_UTR 25.0%
! TTAGTGACATATACTGAAAA+TGG - Chr6:62749265-62749284 MsG0680033343.01.T01:intron 25.0%
! TTCAAAGGGATGTTTATATT+TGG - Chr6:62746577-62746596 MsG0680033343.01.T01:intron 25.0%
!! ACTGAAAAATACCTTTTATG+AGG - Chr6:62746912-62746931 MsG0680033343.01.T01:intron 25.0%
!! AGACTAGTACTTTATCTTTT+GGG - Chr6:62748659-62748678 MsG0680033343.01.T01:five_prime_UTR 25.0%
!! ATTTTTATTGGACATCACAT+GGG - Chr6:62747088-62747107 MsG0680033343.01.T01:CDS 25.0%
!! CTGAAAAATACCTTTTATGA+GGG - Chr6:62746913-62746932 MsG0680033343.01.T01:intron 25.0%
!! CTTTTATGATAGCTAAAAAG+TGG - Chr6:62746381-62746400 MsG0680033343.01.T01:intron 25.0%
!! TAATACTGGTGTATGATTTT+AGG - Chr6:62745935-62745954 MsG0680033343.01.T01:intron 25.0%
!! TCAAGCTTTCTATAATCTTT+TGG - Chr6:62747281-62747300 MsG0680033343.01.T01:CDS 25.0%
!! TGCATTTTCTGTCAAATTAA+AGG + Chr6:62745683-62745702 None:intergenic 25.0%
!!! CCTTTATAATTTGGTTTGTT+GGG - Chr6:62749561-62749580 MsG0680033343.01.T01:five_prime_UTR 25.0%
!!! CTTTTTTGTTATTGCAATAC+TGG - Chr6:62749445-62749464 MsG0680033343.01.T01:intron 25.0%
!!! GCATACATATTTTTAGTTCA+TGG - Chr6:62746647-62746666 MsG0680033343.01.T01:intron 25.0%
!!! TATTTTTATTGGACATCACA+TGG - Chr6:62747087-62747106 MsG0680033343.01.T01:CDS 25.0%
!!! TTGGCTTCTTTAATTTTACT+TGG - Chr6:62748612-62748631 MsG0680033343.01.T01:five_prime_UTR 25.0%
AAAGGGATGTTTATATTTGG+TGG - Chr6:62746580-62746599 MsG0680033343.01.T01:intron 30.0%
AAGAAATGTGGTTTAATGAG+TGG - Chr6:62748006-62748025 MsG0680033343.01.T01:intron 30.0%
AATTATACTGATATTGCACG+TGG - Chr6:62749901-62749920 MsG0680033343.01.T01:five_prime_UTR 30.0%
ACTAAAGCATGAACTTGAAT+TGG - Chr6:62748386-62748405 MsG0680033343.01.T01:five_prime_UTR 30.0%
AGAAAAAATAAACAGACCGT+AGG + Chr6:62749310-62749329 None:intergenic 30.0%
AGAAATGTGGTTTAATGAGT+GGG - Chr6:62748007-62748026 MsG0680033343.01.T01:intron 30.0%
AGAGAATATCACCTATATTG+AGG + Chr6:62745545-62745564 None:intergenic 30.0%
AGTTGATCTCTTATCAACAA+AGG + Chr6:62748568-62748587 None:intergenic 30.0%
ATAAATCCATCCAAAAGTCA+AGG + Chr6:62749030-62749049 None:intergenic 30.0%
ATATGTGAGTATCAAGCTAT+TGG - Chr6:62748593-62748612 MsG0680033343.01.T01:five_prime_UTR 30.0%
ATTAAGATACAGTAGTGAGA+GGG - Chr6:62746208-62746227 MsG0680033343.01.T01:intron 30.0%
ATTTGCATGTTTAGCAAATG+CGG + Chr6:62750022-62750041 None:intergenic 30.0%
CAACATTTCCAATTGTTGTA+AGG + Chr6:62747972-62747991 None:intergenic 30.0%
CAGAAAAACTACAAATGGAT+TGG - Chr6:62748123-62748142 MsG0680033343.01.T01:CDS 30.0%
CAGAGAAGAATAAAATTGCA+AGG + Chr6:62749057-62749076 None:intergenic 30.0%
CAGTTTAAGAAGGCAAATTA+AGG + Chr6:62749619-62749638 None:intergenic 30.0%
CCAAGAAAATATTGTCTACT+AGG - Chr6:62749119-62749138 MsG0680033343.01.T01:intron 30.0%
CCCAACAAACCAAATTATAA+AGG + Chr6:62749564-62749583 None:intergenic 30.0%
GAAAAAATTCACAATGCCTA+CGG - Chr6:62749291-62749310 MsG0680033343.01.T01:intron 30.0%
GATATACCTCTCAGATTAAT+TGG + Chr6:62749091-62749110 None:intergenic 30.0%
GATATGGATTTGAATGTTTG+AGG - Chr6:62745725-62745744 MsG0680033343.01.T01:CDS 30.0%
GGATCTACTAAGAAAGATAA+TGG - Chr6:62748191-62748210 MsG0680033343.01.T01:CDS 30.0%
GTATCATAATCAATAGGCTT+GGG + Chr6:62749769-62749788 None:intergenic 30.0%
TATACCTCTCAGATTAATTG+GGG + Chr6:62749089-62749108 None:intergenic 30.0%
TCATTATCTTCTTCTGTTAG+TGG + Chr6:62747641-62747660 None:intergenic 30.0%
TCCATACTTTGTTCATCATT+GGG + Chr6:62747240-62747259 None:intergenic 30.0%
TCTTAAGTAGTGTAAGTGTT+TGG - Chr6:62746820-62746839 MsG0680033343.01.T01:intron 30.0%
TGACACTAAAGATATATCGA+AGG - Chr6:62747923-62747942 MsG0680033343.01.T01:intron 30.0%
TGTATCATAATCAATAGGCT+TGG + Chr6:62749770-62749789 None:intergenic 30.0%
TGTTTAAAAAATGTCACACC+AGG - Chr6:62748529-62748548 MsG0680033343.01.T01:five_prime_UTR 30.0%
TTAAGAAGGCAAATTAAGGA+GGG + Chr6:62749615-62749634 None:intergenic 30.0%
TTTAAGAAGGCAAATTAAGG+AGG + Chr6:62749616-62749635 None:intergenic 30.0%
TTTGTTGGGATGTTCTATTT+AGG - Chr6:62749575-62749594 MsG0680033343.01.T01:five_prime_UTR 30.0%
! ACAAACAATCGATTCCATTA+AGG - Chr6:62749975-62749994 MsG0680033343.01.T01:five_prime_UTR 30.0%
! CCAAATGGGATAAAATTTTC+AGG + Chr6:62747677-62747696 None:intergenic 30.0%
! CCTAGTAGACAATATTTTCT+TGG + Chr6:62749122-62749141 None:intergenic 30.0%
! CCTGAAAATTTTATCCCATT+TGG - Chr6:62747674-62747693 MsG0680033343.01.T01:intron 30.0%
! GAGACTAGTACTTTATCTTT+TGG - Chr6:62748658-62748677 MsG0680033343.01.T01:five_prime_UTR 30.0%
! GAGTAGTTTGAAATCAATGA+GGG - Chr6:62745895-62745914 MsG0680033343.01.T01:intron 30.0%
! TAGTTGATTCTTAGATCCTT+GGG + Chr6:62748370-62748389 None:intergenic 30.0%
! TCTTTAGTGTCATTATCATC+AGG + Chr6:62747915-62747934 None:intergenic 30.0%
! TTAGTTGATTCTTAGATCCT+TGG + Chr6:62748371-62748390 None:intergenic 30.0%
! TTCATTTGCTTTGAACTAGA+AGG + Chr6:62747461-62747480 None:intergenic 30.0%
! TTTTTATTGGACATCACATG+GGG - Chr6:62747089-62747108 MsG0680033343.01.T01:CDS 30.0%
!! AGAGTTTGTGTTTTTGTTTC+TGG - Chr6:62745648-62745667 MsG0680033343.01.T01:CDS 30.0%
!! GCCTTTATAATTTGGTTTGT+TGG - Chr6:62749560-62749579 MsG0680033343.01.T01:five_prime_UTR 30.0%
!! TGAGATTTTGAGTATGAGAA+TGG + Chr6:62748711-62748730 None:intergenic 30.0%
!! TTTACTTGGTTTGTGTAAGT+AGG - Chr6:62748626-62748645 MsG0680033343.01.T01:five_prime_UTR 30.0%
!! TTTATCTTTTGGGTCTGTTT+TGG - Chr6:62748669-62748688 MsG0680033343.01.T01:five_prime_UTR 30.0%
!!! ATGGGATAAAATTTTCAGGT+TGG + Chr6:62747673-62747692 None:intergenic 30.0%
!!! TTTTGGCTTGCATTTATGTT+TGG - Chr6:62749420-62749439 MsG0680033343.01.T01:intron 30.0%
!!! TTTTGTTATTGCAATACTGG+TGG - Chr6:62749448-62749467 MsG0680033343.01.T01:intron 30.0%
AAAAAATGTCACACCAGGAA+GGG - Chr6:62748534-62748553 MsG0680033343.01.T01:five_prime_UTR 35.0%
AAAGCTTGAGTCTCTTCATT+GGG + Chr6:62747270-62747289 None:intergenic 35.0%
AAGTGTCAGAAAAACCCAAA+TGG - Chr6:62748229-62748248 MsG0680033343.01.T01:CDS 35.0%
AATCTGCTGCATAGTTTCAA+AGG - Chr6:62746562-62746581 MsG0680033343.01.T01:intron 35.0%
AATGCAAAGGGTAGAGTATA+TGG - Chr6:62749817-62749836 MsG0680033343.01.T01:five_prime_UTR 35.0%
AATTTCCACACCCTCATAAA+AGG + Chr6:62746926-62746945 None:intergenic 35.0%
ACAAGCAACACAGTTTAAGA+AGG + Chr6:62749629-62749648 None:intergenic 35.0%
ACACTAATGATTGAAGCTGT+TGG - Chr6:62749787-62749806 MsG0680033343.01.T01:five_prime_UTR 35.0%
ACACTTGGATTACTTGATGA+TGG + Chr6:62747521-62747540 None:intergenic 35.0%
ACAGCTTCAGTAATCCATTT+GGG + Chr6:62748246-62748265 None:intergenic 35.0%
AGACAATCACATATCAAGCA+TGG + Chr6:62747006-62747025 None:intergenic 35.0%
AGATATATTATCGGCAACTG+TGG - Chr6:62749379-62749398 MsG0680033343.01.T01:intron 35.0%
AGTAATCGTGATTCAGATGT+CGG - Chr6:62748330-62748349 MsG0680033343.01.T01:five_prime_UTR 35.0%
ATACATCCATTCTCTATGTG+CGG + Chr6:62746866-62746885 None:intergenic 35.0%
ATACCTCTCAGATTAATTGG+GGG + Chr6:62749088-62749107 None:intergenic 35.0%
ATCATATGAGCAGATGGTAA+TGG - Chr6:62747191-62747210 MsG0680033343.01.T01:CDS 35.0%
ATCTGCTGCATAGTTTCAAA+GGG - Chr6:62746563-62746582 MsG0680033343.01.T01:intron 35.0%
ATGCAAAGGGTAGAGTATAT+GGG - Chr6:62749818-62749837 MsG0680033343.01.T01:five_prime_UTR 35.0%
CAATGATGAACAAAGTATGG+AGG - Chr6:62747239-62747258 MsG0680033343.01.T01:CDS 35.0%
CATACTTTGTTCATCATTGG+GGG + Chr6:62747238-62747257 None:intergenic 35.0%
CATGCATACAAACTCTACTT+TGG - Chr6:62748963-62748982 MsG0680033343.01.T01:intron 35.0%
CCATACTTTGTTCATCATTG+GGG + Chr6:62747239-62747258 None:intergenic 35.0%
CTAAACAAGTGCAGAACAAA+AGG - Chr6:62748478-62748497 MsG0680033343.01.T01:five_prime_UTR 35.0%
CTCCATACTTTGTTCATCAT+TGG + Chr6:62747241-62747260 None:intergenic 35.0%
CTTAACATCATATGAGCAGA+TGG - Chr6:62747185-62747204 MsG0680033343.01.T01:CDS 35.0%
GACTGCAGCAAAAATTAAAG+AGG + Chr6:62746411-62746430 None:intergenic 35.0%
GATGCATACAAACTCTACTT+TGG - Chr6:62748891-62748910 MsG0680033343.01.T01:intron 35.0%
GATTAAGATACAGTAGTGAG+AGG - Chr6:62746207-62746226 MsG0680033343.01.T01:intron 35.0%
TAAAAAATGTCACACCAGGA+AGG - Chr6:62748533-62748552 MsG0680033343.01.T01:five_prime_UTR 35.0%
TATTATAGGGTTCTACCTGA+TGG - Chr6:62746883-62746902 MsG0680033343.01.T01:intron 35.0%
TCACAGTTCTTTGCAATTTC+AGG - Chr6:62745488-62745507 MsG0680033343.01.T01:CDS 35.0%
TCAGATTAATTGGGGGAAAA+TGG + Chr6:62749081-62749100 None:intergenic 35.0%
TCAGCTTCATTCCTCAATAT+AGG - Chr6:62745531-62745550 MsG0680033343.01.T01:CDS 35.0%
TCATAATCCACATCTACCAT+GGG - Chr6:62747718-62747737 MsG0680033343.01.T01:intron 35.0%
TGAGAGATGGAATTTATGGA+GGG + Chr6:62745368-62745387 None:intergenic 35.0%
TTAAGATACAGTAGTGAGAG+GGG - Chr6:62746209-62746228 MsG0680033343.01.T01:intron 35.0%
TTAGGAAGAATTCCACACAA+GGG - Chr6:62748501-62748520 MsG0680033343.01.T01:five_prime_UTR 35.0%
TTTGCACCAGTTGCTATATT+CGG + Chr6:62748739-62748758 None:intergenic 35.0%
! AAATACCTTTTATGAGGGTG+TGG - Chr6:62746918-62746937 MsG0680033343.01.T01:intron 35.0%
! GATGTTTATATTTGGTGGTC+TGG - Chr6:62746585-62746604 MsG0680033343.01.T01:intron 35.0%
! GGAGTAGTTTGAAATCAATG+AGG - Chr6:62745894-62745913 MsG0680033343.01.T01:intron 35.0%
! TGTCTTTTGTCCTTGACTTT+TGG - Chr6:62749017-62749036 MsG0680033343.01.T01:intron 35.0%
! TTATATTTGGTGGTCTGGTT+TGG - Chr6:62746590-62746609 MsG0680033343.01.T01:intron 35.0%
! TTGCTTTGAACTAGAAGGAA+TGG + Chr6:62747456-62747475 None:intergenic 35.0%
! TTTTGTCCTTGACTTTTGGA+TGG - Chr6:62749021-62749040 MsG0680033343.01.T01:intron 35.0%
!! AGTGTAAGTGTTTGGTGTTT+AGG - Chr6:62746828-62746847 MsG0680033343.01.T01:intron 35.0%
!! ATTGGTGATGTTGGATATTG+TGG + Chr6:62747596-62747615 None:intergenic 35.0%
!! ATTGTCTACTAGGGTGTTTT+TGG - Chr6:62749129-62749148 MsG0680033343.01.T01:intron 35.0%
!! GTAATCGAGTGACTTGTTAT+AGG - Chr6:62749526-62749545 MsG0680033343.01.T01:five_prime_UTR 35.0%
!! GTTCTTTGCAATTTCAGGTT+TGG - Chr6:62745493-62745512 MsG0680033343.01.T01:CDS 35.0%
!! TGCAGTTGATTTGCATACAT+TGG - Chr6:62746434-62746453 MsG0680033343.01.T01:intron 35.0%
!!! TTTGTTTTGACGAGCCTTAA+TGG + Chr6:62749992-62750011 None:intergenic 35.0%
!!! TTTTAGTTCATGGACTTGCA+GGG - Chr6:62746657-62746676 MsG0680033343.01.T01:intron 35.0%
!!! TTTTTAGTTCATGGACTTGC+AGG - Chr6:62746656-62746675 MsG0680033343.01.T01:intron 35.0%
AAAAATGTCACACCAGGAAG+GGG - Chr6:62748535-62748554 MsG0680033343.01.T01:five_prime_UTR 40.0%
AAGTGATCTCTCACATCATC+TGG + Chr6:62747042-62747061 None:intergenic 40.0%
ACATCTCCGAATATAGCAAC+TGG - Chr6:62748730-62748749 MsG0680033343.01.T01:five_prime_UTR 40.0%
ATCTTCTTCTGTTAGTGGCA+CGG + Chr6:62747636-62747655 None:intergenic 40.0%
ATGGAATTTATGGAGGGTTG+TGG + Chr6:62745362-62745381 None:intergenic 40.0%
CAACATCCAAAGCGTAATAC+TGG - Chr6:62745921-62745940 MsG0680033343.01.T01:intron 40.0%
CAAGTGCAGAACAAAAGGTT+AGG - Chr6:62748483-62748502 MsG0680033343.01.T01:five_prime_UTR 40.0%
CACAGCTTCAGTAATCCATT+TGG + Chr6:62748247-62748266 None:intergenic 40.0%
CACATGGGAATCAAAAGCTA+AGG - Chr6:62748170-62748189 MsG0680033343.01.T01:CDS 40.0%
CATAATCCACATCTACCATG+GGG - Chr6:62747719-62747738 MsG0680033343.01.T01:intron 40.0%
CATACACCAGTATTACGCTT+TGG + Chr6:62745930-62745949 None:intergenic 40.0%
CCCCAATGATGAACAAAGTA+TGG - Chr6:62747236-62747255 MsG0680033343.01.T01:CDS 40.0%
CGAGTGAGAGATGGAATTTA+TGG + Chr6:62745372-62745391 None:intergenic 40.0%
CTAATGATTGAAGCTGTTGG+AGG - Chr6:62749790-62749809 MsG0680033343.01.T01:five_prime_UTR 40.0%
CTCATAATCCACATCTACCA+TGG - Chr6:62747717-62747736 MsG0680033343.01.T01:intron 40.0%
GAAAGCTTGAGTCTCTTCAT+TGG + Chr6:62747271-62747290 None:intergenic 40.0%
GAATATAGCAACTGGTGCAA+AGG - Chr6:62748738-62748757 MsG0680033343.01.T01:five_prime_UTR 40.0%
GAATGTTTGAGGGAAGAAAG+AGG - Chr6:62745736-62745755 MsG0680033343.01.T01:CDS 40.0%
GATCTCTCTGTTATAGGAGA+TGG + Chr6:62747566-62747585 None:intergenic 40.0%
GCGTTTCTACAATAATGCCT+TGG - Chr6:62746019-62746038 MsG0680033343.01.T01:intron 40.0%
GGAAGAAAACACTTCACTAG+AGG + Chr6:62746523-62746542 None:intergenic 40.0%
GGAATGAAGCTGAGAAAGAA+AGG + Chr6:62745524-62745543 None:intergenic 40.0%
GTCAGTGATCTCTCTGTTAT+AGG + Chr6:62747572-62747591 None:intergenic 40.0%
GTGAGAGATGGAATTTATGG+AGG + Chr6:62745369-62745388 None:intergenic 40.0%
GTTAGGAAGAATTCCACACA+AGG - Chr6:62748500-62748519 MsG0680033343.01.T01:five_prime_UTR 40.0%
GTTGGAGGAAGAAATGCAAA+GGG - Chr6:62749805-62749824 MsG0680033343.01.T01:five_prime_UTR 40.0%
TAATCCAAAAGGGACAACCA+AGG + Chr6:62746039-62746058 None:intergenic 40.0%
TCATCATTGGGGGAAAAACT+TGG + Chr6:62747228-62747247 None:intergenic 40.0%
TGAACAGGAGGCAACTATTA+GGG - Chr6:62748146-62748165 MsG0680033343.01.T01:CDS 40.0%
TGGAATTTATGGAGGGTTGT+GGG + Chr6:62745361-62745380 None:intergenic 40.0%
TGTTGGAGGAAGAAATGCAA+AGG - Chr6:62749804-62749823 MsG0680033343.01.T01:five_prime_UTR 40.0%
TTAAACAGTTCTCCCTTGTG+TGG + Chr6:62748516-62748535 None:intergenic 40.0%
TTTCCCCCAATTAATCTGAG+AGG - Chr6:62749082-62749101 MsG0680033343.01.T01:intron 40.0%
! ACTTCTAAGAATGCTCCTCT+TGG - Chr6:62747482-62747501 MsG0680033343.01.T01:intron 40.0%
! ATCACAATCGCCTTTGTTTG+AGG - Chr6:62747308-62747327 MsG0680033343.01.T01:CDS 40.0%
! ATGGATTACTGAAGCTGTGT+GGG - Chr6:62748248-62748267 MsG0680033343.01.T01:CDS 40.0%
! CATGGTAGATGTGGATTATG+AGG + Chr6:62747719-62747738 None:intergenic 40.0%
! CCATTTTGCCCAAAAACAGA+TGG + Chr6:62747153-62747172 None:intergenic 40.0%
! TAGAGTATATGGGCTTGGTT+TGG - Chr6:62749828-62749847 MsG0680033343.01.T01:five_prime_UTR 40.0%
! TCACAATCGCCTTTGTTTGA+GGG - Chr6:62747309-62747328 MsG0680033343.01.T01:CDS 40.0%
! TTGATGGCCCTTACAACAAT+TGG - Chr6:62747961-62747980 MsG0680033343.01.T01:intron 40.0%
!! AACCTGCACCATCTGTTTTT+GGG - Chr6:62747142-62747161 MsG0680033343.01.T01:CDS 40.0%
!! AATGGATTACTGAAGCTGTG+TGG - Chr6:62748247-62748266 MsG0680033343.01.T01:CDS 40.0%
!! CTACAAATGGATTGGTGAAC+AGG - Chr6:62748131-62748150 MsG0680033343.01.T01:CDS 40.0%
!! CTTAGCTTTTGATTCCCATG+TGG + Chr6:62748172-62748191 None:intergenic 40.0%
!! GAAGTACTGAGATGAACACT+TGG + Chr6:62747536-62747555 None:intergenic 40.0%
!! GGATTACTTGATGATGGAGT+AGG + Chr6:62747515-62747534 None:intergenic 40.0%
!! TCTGTGTCTATTGGTGATGT+TGG + Chr6:62747605-62747624 None:intergenic 40.0%
!! TCTGTTGATAATGCTACTCG+TGG - Chr6:62750081-62750100 MsG0680033343.01.T01:five_prime_UTR 40.0%
!!! CCATCTGTTTTTGGGCAAAA+TGG - Chr6:62747150-62747169 MsG0680033343.01.T01:CDS 40.0%
AAGGGTAGAGTATATGGGCT+TGG - Chr6:62749823-62749842 MsG0680033343.01.T01:five_prime_UTR 45.0%
AATCGTGATTCAGATGTCGG+AGG - Chr6:62748333-62748352 MsG0680033343.01.T01:five_prime_UTR 45.0%
ATCCAACACACAGTAGTGAG+AGG - Chr6:62746281-62746300 MsG0680033343.01.T01:intron 45.0%
ATGTGTCCGCACATAGAGAA+TGG - Chr6:62746857-62746876 MsG0680033343.01.T01:intron 45.0%
CGTGGAAGCAATGCAAATGT+TGG - Chr6:62750099-62750118 MsG0680033343.01.T01:five_prime_UTR 45.0%
CTAGAAGGAATGGACAGAGT+AGG + Chr6:62747446-62747465 None:intergenic 45.0%
GATATTGCACGTGGTATGAG+TGG - Chr6:62749910-62749929 MsG0680033343.01.T01:five_prime_UTR 45.0%
GATGGTGCAGGTTGTGTTAA+AGG + Chr6:62747135-62747154 None:intergenic 45.0%
GCACAATTGCTTGCAATGTG+GGG - Chr6:62748270-62748289 MsG0680033343.01.T01:exon 45.0%
GGAGTAGGAATAGTACCAAG+AGG + Chr6:62747500-62747519 None:intergenic 45.0%
GGCACAATTGCTTGCAATGT+GGG - Chr6:62748269-62748288 MsG0680033343.01.T01:exon 45.0%
GTAAGGTAGGGTCTCCAAAT+GGG + Chr6:62747691-62747710 None:intergenic 45.0%
GTCTCAGACTCTGTGTCTAT+TGG + Chr6:62747614-62747633 None:intergenic 45.0%
GTGAACAGGAGGCAACTATT+AGG - Chr6:62748145-62748164 MsG0680033343.01.T01:CDS 45.0%
TATGAGGACCAGGTAAGGTA+GGG + Chr6:62747703-62747722 None:intergenic 45.0%
TCAGTAAGATCTTTGCCCCA+TGG + Chr6:62747737-62747756 None:intergenic 45.0%
TCCAACACACAGTAGTGAGA+GGG - Chr6:62746282-62746301 MsG0680033343.01.T01:intron 45.0%
TGGATTATGAGGACCAGGTA+AGG + Chr6:62747708-62747727 None:intergenic 45.0%
TGGATTTAGACGTTGAGCCA+CGG + Chr6:62749870-62749889 None:intergenic 45.0%
TGGGGAAGAAATACCTGCAT+CGG - Chr6:62747107-62747126 MsG0680033343.01.T01:CDS 45.0%
TGTGTTAAAGGAACCGATGC+AGG + Chr6:62747123-62747142 None:intergenic 45.0%
TTACCAGCCTCAAAATGACG+AGG + Chr6:62749727-62749746 None:intergenic 45.0%
TTATGAGGACCAGGTAAGGT+AGG + Chr6:62747704-62747723 None:intergenic 45.0%
! AATGCCTTGGTTGTCCCTTT+TGG - Chr6:62746032-62746051 MsG0680033343.01.T01:intron 45.0%
! AGATGTGGATTATGAGGACC+AGG + Chr6:62747713-62747732 None:intergenic 45.0%
! CAACCTGCACCATCTGTTTT+TGG - Chr6:62747141-62747160 MsG0680033343.01.T01:CDS 45.0%
! CACAATCGCCTTTGTTTGAG+GGG - Chr6:62747310-62747329 MsG0680033343.01.T01:CDS 45.0%
! CTGGTGTATGATTTTAGGCG+TGG - Chr6:62745940-62745959 MsG0680033343.01.T01:intron 45.0%
!! CAAATGGATTGGTGAACAGG+AGG - Chr6:62748134-62748153 MsG0680033343.01.T01:CDS 45.0%
!! GTATATGGGCTTGGTTTGGA+TGG - Chr6:62749832-62749851 MsG0680033343.01.T01:five_prime_UTR 45.0%
!! GTCTCAACCTCGTCATTTTG+AGG - Chr6:62749717-62749736 MsG0680033343.01.T01:five_prime_UTR 45.0%
!! GTCTGGTTTGGTTGTTCTGT+AGG - Chr6:62746602-62746621 MsG0680033343.01.T01:intron 45.0%
!! TGAGCAGATGGTAATGGATG+TGG - Chr6:62747197-62747216 MsG0680033343.01.T01:CDS 45.0%
!! TGCAAATGTTGGTGCTGATG+TGG - Chr6:62750110-62750129 MsG0680033343.01.T01:five_prime_UTR 45.0%
!! TTTTTCAGTCCCACTCCATC+AGG + Chr6:62746901-62746920 None:intergenic 45.0%
!!! AGTATAATTTTAATATTTAT+TGG + Chr6:62749890-62749909 None:intergenic 5.0%
AAAGGTTTGTGACCCCTTCC+TGG + Chr6:62748550-62748569 None:intergenic 50.0%
AGGCAACTATTAGGGCCACA+TGG - Chr6:62748154-62748173 MsG0680033343.01.T01:CDS 50.0%
AGGGTTCTACCTGATGGAGT+GGG - Chr6:62746889-62746908 MsG0680033343.01.T01:intron 50.0%
ATGGACTTGCAGGGAAGTTG+TGG - Chr6:62746666-62746685 MsG0680033343.01.T01:intron 50.0%
CCAACACACAGTAGTGAGAG+GGG - Chr6:62746283-62746302 MsG0680033343.01.T01:intron 50.0%
CTACTGCACCCCTCAAACAA+AGG + Chr6:62747321-62747340 None:intergenic 50.0%
GAGTGGGCAGTAATGCATCT+TGG - Chr6:62748023-62748042 MsG0680033343.01.T01:intron 50.0%
GCGATTGAACGAGTGAGAGA+TGG + Chr6:62745381-62745400 None:intergenic 50.0%
GGATTTAGACGTTGAGCCAC+GGG + Chr6:62749869-62749888 None:intergenic 50.0%
GGCAACTATTAGGGCCACAT+GGG - Chr6:62748155-62748174 MsG0680033343.01.T01:CDS 50.0%
GGGCACAATTGCTTGCAATG+TGG - Chr6:62748268-62748287 MsG0680033343.01.T01:exon 50.0%
GGTAAGGTAGGGTCTCCAAA+TGG + Chr6:62747692-62747711 None:intergenic 50.0%
TAGGGTTCTACCTGATGGAG+TGG - Chr6:62746888-62746907 MsG0680033343.01.T01:intron 50.0%
TCTTTGCCCCATGGTAGATG+TGG + Chr6:62747728-62747747 None:intergenic 50.0%
TGCCCAAAAACAGATGGTGC+AGG + Chr6:62747147-62747166 None:intergenic 50.0%
TGGTATGAGTGGAGAGGTTG+AGG - Chr6:62749921-62749940 MsG0680033343.01.T01:five_prime_UTR 50.0%
TTTGGAGACCCTACCTTACC+TGG - Chr6:62747692-62747711 MsG0680033343.01.T01:intron 50.0%
! GAGGCTGGTAATGATGAGAG+TGG - Chr6:62749736-62749755 MsG0680033343.01.T01:five_prime_UTR 50.0%
!! CAGATGGTAATGGATGTGGC+AGG - Chr6:62747201-62747220 MsG0680033343.01.T01:CDS 50.0%
!!! CAACCTCGTCATTTTGAGGC+TGG - Chr6:62749721-62749740 MsG0680033343.01.T01:five_prime_UTR 50.0%
CCCCTCTCACTACTGTGTGT+TGG + Chr6:62746286-62746305 None:intergenic 55.0%
GAGAGGTTGAGGCGCGTTTA+AGG - Chr6:62749932-62749951 MsG0680033343.01.T01:five_prime_UTR 55.0%
GGAGGTTCATTGCACACCCA+AGG - Chr6:62748351-62748370 MsG0680033343.01.T01:five_prime_UTR 55.0%
TGCACGTGGTATGAGTGGAG+AGG - Chr6:62749915-62749934 MsG0680033343.01.T01:five_prime_UTR 55.0%
GATGGCAGCATGCGCACCCG+TGG - Chr6:62749850-62749869 MsG0680033343.01.T01:five_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 62745345 62750140 62745345 ID=MsG0680033343.01;Name=MsG0680033343.01
Chr6 mRNA 62745345 62750140 62745345 ID=MsG0680033343.01.T01;Parent=MsG0680033343.01;Name=MsG0680033343.01.T01;_AED=0.30;_eAED=0.30;_QI=1261|0.25|0.6|1|0.75|0.6|5|0|288
Chr6 exon 62749500 62750140 62749500 ID=MsG0680033343.01.T01:exon:19205;Parent=MsG0680033343.01.T01
Chr6 exon 62748063 62748901 62748063 ID=MsG0680033343.01.T01:exon:19206;Parent=MsG0680033343.01.T01
Chr6 exon 62747078 62747359 62747078 ID=MsG0680033343.01.T01:exon:19207;Parent=MsG0680033343.01.T01
Chr6 exon 62745641 62745800 62745641 ID=MsG0680033343.01.T01:exon:19208;Parent=MsG0680033343.01.T01
Chr6 exon 62745345 62745550 62745345 ID=MsG0680033343.01.T01:exon:19209;Parent=MsG0680033343.01.T01
Chr6 five_prime_UTR 62749500 62750140 62749500 ID=MsG0680033343.01.T01:five_prime_utr;Parent=MsG0680033343.01.T01
Chr6 five_prime_UTR 62748282 62748901 62748282 ID=MsG0680033343.01.T01:five_prime_utr;Parent=MsG0680033343.01.T01
Chr6 CDS 62748063 62748281 62748063 ID=MsG0680033343.01.T01:cds;Parent=MsG0680033343.01.T01
Chr6 CDS 62747078 62747359 62747078 ID=MsG0680033343.01.T01:cds;Parent=MsG0680033343.01.T01
Chr6 CDS 62745641 62745800 62745641 ID=MsG0680033343.01.T01:cds;Parent=MsG0680033343.01.T01
Chr6 CDS 62745345 62745550 62745345 ID=MsG0680033343.01.T01:cds;Parent=MsG0680033343.01.T01
Gene Sequence

>MsG0680033343.01.T01

ATGGTAATGGATGTGGCAGGTCCAAGTTTTTCCCCCAATGATGAACAAAGTATGGAGGAGACACCCAATGAAGAGACTCAAGCTTTCTATAATCTTTTGGCTGCATCACAATCGCCTTTGTTTGAGGGGTGCAGTAGTCACTCAGAGTTGTCTGCTTCACTAGAATTGCTTACAATTAAAGCTGAGCATAATTTAAGTCAAGAAGCTTATAATAAAATTAAAAACTACAAATGGATTGGTGAACAGGAGGCAACTATTAGGGCCACATGGGAATCAAAAGCTAAGGATCTACTAAGAAAGATAATGGCGAGAGTACGTGAAAAAGTGTCAGAAAAACCCAAATGGATTACTGAAGCTGTGTGGGCACAATTGCTTGCAATGTGGGGAGATGATCATTACATTACAAATAGATGTGTGGCAGCTAGTAATCGTGATTCAGATGTCGGAGGTTCATTGCACACCCAAGGATCTAAGAATCAACTAAAGCATGAACTTGAATTGAAAAACTTTGTAAATCTCTGTTCACAAGCTGAGTCTCAACCTCGTCATTTTGAGGCTGGTAATGATGAGAGTGGTACTCAACCCAAGCCTATTGATTATGATACACTAATGATTGAAGCTGTTGGAGGAAGAAATGCAAAGGGTAGAGTATATGGGCTTGAGGTTGAGGCGCGTTTAAGGAAAAAAATTGCAGAGCAACAACAAACAATCGATTCCATTAAGGCTCGTCAAAACAAAATGATTGCCGCATTTGCTAAACATGCAAATATAGATTTGGATTTAATGGATTTAGATGAAGATGATCACTCTGTTGATAATGCTACTCGTGGAAGCAATGCAAATGTTGGTGCTGATGTGGAAGAATAA
Protein sequence

>MsG0680033343.01.T01

MVMDVAGPSFSPNDEQSMEETPNEETQAFYNLLAASQSPLFEGCSSHSELSASLELLTIKAEHNLSQEAYNKIKNYKWIGEQEATIRATWESKAKDLLRKIMARVREKVSEKPKWITEAVWAQLLAMWGDDHYITNRCVAASNRDSDVGGSLHTQGSKNQLKHELELKNFVNLCSQAESQPRHFEAGNDESGTQPKPIDYDTLMIEAVGGRNAKGRVYGLEVEARLRKKIAEQQQTIDSIKARQNKMIAAFAKHANIDLDLMDLDEDDHSVDNATRGSNANVGADVEE*