AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047394.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047394.01.T01 MTR_4g126140 72.929 495 46 6 119 531 256 744 0.0 671
MsG0880047394.01.T01 MTR_4g126140 79.646 113 21 1 38 150 101 211 3.77e-49 181
MsG0880047394.01.T01 MTR_1g475240 36.816 603 219 8 85 531 187 783 5.80e-109 344
MsG0880047394.01.T01 MTR_1g075190 36.816 603 219 8 85 531 187 783 5.80e-109 344
MsG0880047394.01.T01 MTR_8g066010 54.865 370 75 8 125 402 1 370 2.05e-108 328
MsG0880047394.01.T01 MTR_6g084410 34.524 588 219 10 80 516 188 760 1.64e-82 274
MsG0880047394.01.T01 MTR_6g008410 38.025 405 144 5 194 516 317 696 1.61e-68 239
MsG0880047394.01.T01 MTR_8g104340 35.307 456 201 10 108 487 100 537 1.48e-64 222
MsG0880047394.01.T01 MTR_2g100660 41.641 329 142 8 196 482 332 652 4.88e-58 207
MsG0880047394.01.T01 MTR_8g104340 34.129 419 186 9 108 450 100 504 1.39e-53 189
MsG0880047394.01.T01 MTR_8g104340 34.294 347 142 8 107 381 99 431 3.32e-44 163
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047394.01.T01 AT4G29750 43.919 592 183 11 87 533 217 804 5.49e-137 417
MsG0880047394.01.T01 AT4G29750 43.919 592 183 11 87 533 217 804 7.39e-137 417
MsG0880047394.01.T01 AT4G14510 40.625 448 152 7 196 531 373 818 2.54e-89 294
MsG0880047394.01.T01 AT3G23070 41.262 412 155 7 205 531 382 791 3.82e-86 285
MsG0880047394.01.T01 AT3G18390 33.564 578 224 9 93 516 221 792 1.11e-85 283
MsG0880047394.01.T01 AT3G01370 33.678 484 222 7 136 535 271 739 1.20e-65 230
MsG0880047394.01.T01 AT5G16180 33.121 471 242 9 83 491 177 636 1.83e-57 204
MsG0880047394.01.T01 AT5G16180 31.300 377 188 8 83 399 177 542 2.50e-33 134

Find 119 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCGTGACAACAAGCTTT+TGG 0.215837 8:+85671869 None:intergenic
AACCTTACTTTCTAGAAATA+AGG 0.223126 8:-85672769 MsG0880047394.01.T01:CDS
AGGAATATATTGTAATTTAC+AGG 0.243412 8:-85672749 MsG0880047394.01.T01:CDS
CAATTACCTGCTGTGGTTCC+AGG 0.270048 8:-85674942 MsG0880047394.01.T01:CDS
TGTGGTTGTTCCACTAGTTC+TGG 0.272480 8:+85676122 None:intergenic
GTGGATGCTATTCATGAAAA+TGG 0.287010 8:-85675754 MsG0880047394.01.T01:CDS
TTCCCAACTTCTTGTTTACT+TGG 0.294491 8:+85672525 None:intergenic
CTTTCTCTTCCTCGTCTTGT+TGG 0.296198 8:+85672661 None:intergenic
CATCCTATCATTAGATGTAT+AGG 0.301240 8:+85674636 None:intergenic
ATGAAGCCATACTTACTTCT+AGG 0.301568 8:-85672208 MsG0880047394.01.T01:intron
AGGTTCAGTGTTGGAGTTGC+TGG 0.308508 8:-85675793 MsG0880047394.01.T01:CDS
ACACCATATATCAGATTTAC+AGG 0.309479 8:-85671621 MsG0880047394.01.T01:CDS
TTGTCTCTCAGTCAGGGTTT+TGG 0.325654 8:+85672698 None:intergenic
GAGATCTTTGTTTAGGAAGA+TGG 0.336007 8:-85672239 MsG0880047394.01.T01:CDS
AGCAGACCTTCCAACTGATT+TGG 0.336227 8:-85672281 MsG0880047394.01.T01:CDS
AAATTCTGGTGGTTCTGTTA+TGG 0.337329 8:-85675950 MsG0880047394.01.T01:CDS
TCTCCTGTAAATCTGATATA+TGG 0.341489 8:+85671618 None:intergenic
ATGAAGAGAGATCTTTGTTT+AGG 0.342661 8:-85672246 MsG0880047394.01.T01:CDS
TCTCAAATGCCGTTACTTGC+TGG 0.349600 8:-85672594 MsG0880047394.01.T01:CDS
TTCCTTATTTCTAGAAAGTA+AGG 0.350503 8:+85672767 None:intergenic
AAACGGGTACAGCGAAATTC+TGG 0.358562 8:-85675964 MsG0880047394.01.T01:CDS
AAATCAGTTGGAAGGTCTGC+TGG 0.363738 8:+85672283 None:intergenic
TGGGTCCGCGCTTCAAAGAT+TGG 0.371657 8:-85674998 MsG0880047394.01.T01:CDS
AGAGGTTGTGGTGTTCCTCT+TGG 0.374071 8:+85676096 None:intergenic
GTATTAGTAGTTTGAAGAAA+AGG 0.382826 8:-85675900 MsG0880047394.01.T01:CDS
TTCCAAGGCGTTTATCTCCT+TGG 0.384425 8:-85676062 MsG0880047394.01.T01:CDS
TAGGGCAGCAACCGCCAATT+GGG 0.384752 8:-85672556 MsG0880047394.01.T01:CDS
AACCTTCTGTTGGATGAGTT+GGG 0.390797 8:-85675017 MsG0880047394.01.T01:CDS
AAGGAGAAGTAATACTGAAT+TGG 0.396918 8:-85675881 MsG0880047394.01.T01:CDS
TGCTGGTATTACTCAGGAAT+TGG 0.397390 8:-85675776 MsG0880047394.01.T01:CDS
ATTCTACCTAGAAGTAAGTA+TGG 0.400395 8:+85672202 None:intergenic
GAGGTTGTGGTGTTCCTCTT+GGG 0.400789 8:+85676097 None:intergenic
ATTCAGTGTAGAGTAGAGTT+TGG 0.402904 8:+85671444 None:intergenic
CAACCTTCTGTTGGATGAGT+TGG 0.405542 8:-85675018 MsG0880047394.01.T01:CDS
ATCCTATCATTAGATGTATA+GGG 0.412690 8:+85674637 None:intergenic
CTAGGGCAGCAACCGCCAAT+TGG 0.414139 8:-85672557 MsG0880047394.01.T01:CDS
CTTGGAAACTCAAAATTAAG+AGG 0.416191 8:+85676078 None:intergenic
GAGAAATACCTTGAGTTCTT+CGG 0.424079 8:+85674612 None:intergenic
CTTCTTGTTGTTGTTGCCAT+GGG 0.426767 8:+85676150 None:intergenic
CAACCAAGTAAACAAGAAGT+TGG 0.431444 8:-85672528 MsG0880047394.01.T01:CDS
ATAGGGAACTCCACGTTTGA+TGG 0.437793 8:+85674654 None:intergenic
ATGCATTTGCAGAAATTGAC+TGG 0.442160 8:-85672795 MsG0880047394.01.T01:intron
ATTGGCGGAGAAGTTGATTC+CGG 0.442381 8:-85675863 MsG0880047394.01.T01:CDS
TCTTCTTGTTGTTGTTGCCA+TGG 0.444521 8:+85676149 None:intergenic
GTTGCAGAGACTGAGAAATA+TGG 0.447718 8:-85675833 MsG0880047394.01.T01:CDS
ACTTGGTTGATGTCCCCAAT+TGG 0.449038 8:+85672542 None:intergenic
GAAGGATTTAGCTAAAATAC+AGG 0.450289 8:-85672317 MsG0880047394.01.T01:CDS
TCTCGATTAAAAGATTCAAT+AGG 0.464473 8:+85675098 None:intergenic
TTCCCTATACATCTAATGAT+AGG 0.466667 8:-85674639 MsG0880047394.01.T01:CDS
AAGCTTGTTGTCACGAAGAC+AGG 0.466888 8:-85671865 MsG0880047394.01.T01:CDS
TGGTGTTCCTCTTGGGATTG+TGG 0.467352 8:+85676104 None:intergenic
AATGATGAGAGAATCTACTT+TGG 0.470218 8:-85672502 MsG0880047394.01.T01:CDS
GGTAATTGATCAGCATCAAC+AGG 0.474127 8:+85674957 None:intergenic
TGGAACCCTTGCTGAGACTA+GGG 0.474177 8:-85672574 MsG0880047394.01.T01:CDS
AGATCTTTGTTTAGGAAGAT+GGG 0.477491 8:-85672238 MsG0880047394.01.T01:CDS
CTGGAACCCTTGCTGAGACT+AGG 0.478799 8:-85672575 MsG0880047394.01.T01:CDS
TGGACAATTCAGTGGATGTT+GGG 0.481308 8:-85675162 MsG0880047394.01.T01:intron
GATCGAACTCAACCTTCTGT+TGG 0.482859 8:-85675027 MsG0880047394.01.T01:CDS
AACTCAAAATTAAGAGGTTG+TGG 0.486977 8:+85676084 None:intergenic
AGACTCTGCAGAGTATTTGA+AGG 0.486990 8:-85675078 MsG0880047394.01.T01:CDS
AGACAAAGATAATGTGAAAC+GGG 0.489498 8:-85675980 MsG0880047394.01.T01:CDS
TGAAATAAGTGTGAAAGAAA+TGG 0.489780 8:-85675126 MsG0880047394.01.T01:CDS
TTGATCAGCATCAACAGGTA+AGG 0.490123 8:+85674962 None:intergenic
AGTCTCTGCAACTCATGTTC+CGG 0.491693 8:+85675844 None:intergenic
AACCAAGTAAACAAGAAGTT+GGG 0.491842 8:-85672527 MsG0880047394.01.T01:CDS
AAGACAAAGATAATGTGAAA+CGG 0.505781 8:-85675981 MsG0880047394.01.T01:CDS
GTTAATGTCTCCAAATCAGT+TGG 0.506886 8:+85672271 None:intergenic
GTGTTTGGGAAGCTAATTTG+AGG 0.509014 8:+85676180 None:intergenic
TGTTTGGGAAGCTAATTTGA+GGG 0.512273 8:+85676181 None:intergenic
TTATACCCTGGAACCACAGC+AGG 0.514036 8:+85674936 None:intergenic
TGCATTTGCAGAAATTGACT+GGG 0.522489 8:-85672794 MsG0880047394.01.T01:intron
TGCTGATCAATTACCTGCTG+TGG 0.523115 8:-85674949 MsG0880047394.01.T01:CDS
TGCCAAGGAGATAAACGCCT+TGG 0.525681 8:+85676060 None:intergenic
GGTAGGCGGGATGTTTATGC+TGG 0.532035 8:-85672101 MsG0880047394.01.T01:CDS
GAGAAGTAATACTGAATTGG+CGG 0.534782 8:-85675878 MsG0880047394.01.T01:CDS
CATGAGTGAAGAAGAATCGA+TGG 0.544193 8:-85675054 MsG0880047394.01.T01:CDS
GGAAGAAGTAGAGAACTTCA+AGG 0.547852 8:-85674730 MsG0880047394.01.T01:CDS
ATGGTGGAGAGGTTCAGTGT+TGG 0.549002 8:-85675802 MsG0880047394.01.T01:CDS
AATTACCTGCTGTGGTTCCA+GGG 0.549523 8:-85674941 MsG0880047394.01.T01:intron
GTGGACAATTCAGTGGATGT+TGG 0.556615 8:-85675163 MsG0880047394.01.T01:intron
TTGCTGCCCTAGTCTCAGCA+AGG 0.558727 8:+85672568 None:intergenic
GGAATATATTGTAATTTACA+GGG 0.559154 8:-85672748 MsG0880047394.01.T01:CDS
GAGAAATATGGCGTTGAGGA+TGG 0.559402 8:-85675821 MsG0880047394.01.T01:CDS
AATTCAGTGGATGTTGGGAG+TGG 0.562190 8:-85675157 MsG0880047394.01.T01:intron
AAATATGGCGTTGAGGATGG+TGG 0.563812 8:-85675818 MsG0880047394.01.T01:CDS
GTTGTCACGAAGACAGGCAT+TGG 0.566651 8:-85671859 MsG0880047394.01.T01:CDS
CTATACATCTAATGATAGGA+TGG 0.569547 8:-85674635 MsG0880047394.01.T01:CDS
TGGAGTTGCTGGTATTACTC+AGG 0.570067 8:-85675782 MsG0880047394.01.T01:CDS
CCGCGCTTCAAAGATTGGAC+AGG 0.571785 8:-85674993 MsG0880047394.01.T01:CDS
TAGAAAACATGCATCTACAC+TGG 0.573476 8:-85672073 MsG0880047394.01.T01:CDS
AGAAGACAAACCAGAACTAG+TGG 0.574074 8:-85676132 MsG0880047394.01.T01:CDS
AATCAGTTGGAAGGTCTGCT+GGG 0.575969 8:+85672284 None:intergenic
GCGTTTATCTCCTTGGCACG+TGG 0.582500 8:-85676055 MsG0880047394.01.T01:CDS
TGATCAGCATCAACAGGTAA+GGG 0.585666 8:+85674963 None:intergenic
TGGTATTACTCAGGAATTGG+TGG 0.587892 8:-85675773 MsG0880047394.01.T01:CDS
ATGTCTCCAAATCAGTTGGA+AGG 0.588053 8:+85672275 None:intergenic
CTAGAGCTATAGTAAAGCTG+TGG 0.601734 8:-85674702 MsG0880047394.01.T01:CDS
TAGAGCTATAGTAAAGCTGT+GGG 0.602614 8:-85674701 MsG0880047394.01.T01:CDS
AAGGTTCAGGAAGTCTGAGA+AGG 0.605613 8:-85672335 MsG0880047394.01.T01:CDS
TAGGATGGCCGAAGAACTCA+AGG 0.607091 8:-85674620 MsG0880047394.01.T01:intron
GAATATATTGTAATTTACAG+GGG 0.614122 8:-85672747 MsG0880047394.01.T01:CDS
GCAAGGGTTCCAGCAAGTAA+CGG 0.614542 8:+85672585 None:intergenic
TGGTTGATGTCCCCAATTGG+CGG 0.616228 8:+85672545 None:intergenic
ACACTGGAAATATCGCGAGT+TGG 0.619243 8:-85672057 MsG0880047394.01.T01:intron
AGGGCAGCAACCGCCAATTG+GGG 0.622870 8:-85672555 MsG0880047394.01.T01:CDS
GACTGAGAAATATGGCGTTG+AGG 0.626272 8:-85675825 MsG0880047394.01.T01:CDS
GACCCAACTCATCCAACAGA+AGG 0.627115 8:+85675015 None:intergenic
ATAAGTGTGAAAGAAATGGT+TGG 0.627154 8:-85675122 MsG0880047394.01.T01:CDS
TGCTGCCCTAGTCTCAGCAA+GGG 0.628919 8:+85672569 None:intergenic
AACTGTTCTCCAACAAGACG+AGG 0.635550 8:-85672670 MsG0880047394.01.T01:CDS
ATGCTATTCATGAAAATGGA+TGG 0.643754 8:-85675750 MsG0880047394.01.T01:intron
TGGCGTTGAGGATGGTGGAG+AGG 0.659099 8:-85675813 MsG0880047394.01.T01:CDS
CGGGTACAGCGAAATTCTGG+TGG 0.662432 8:-85675961 MsG0880047394.01.T01:CDS
GCATTTGCAGAAATTGACTG+GGG 0.670583 8:-85672793 MsG0880047394.01.T01:intron
TATTGAGCTTCAAAGACGAG+AGG 0.684121 8:-85671829 MsG0880047394.01.T01:intron
CCTGTCCAATCTTTGAAGCG+CGG 0.686187 8:+85674993 None:intergenic
CATTTGCAGAAATTGACTGG+GGG 0.692019 8:-85672792 MsG0880047394.01.T01:intron
AAGGATTTAGCTAAAATACA+GGG 0.697797 8:-85672316 MsG0880047394.01.T01:CDS
GGAACAACCACAATCCCAAG+AGG 0.708063 8:-85676111 MsG0880047394.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAATAATTATTTATCGT+GGG - Chr8:85675705-85675724 MsG0880047394.01.T01:intron 10.0%
!! ATCTAACTTTATAAATTATA+TGG - Chr8:85675256-85675275 MsG0880047394.01.T01:intron 10.0%
!! TTTATAAATTATATGGTTAT+AGG - Chr8:85675263-85675282 MsG0880047394.01.T01:intron 10.0%
!!! AATCAAACAAAATTTTTTAT+GGG + Chr8:85674599-85674618 None:intergenic 10.0%
!!! TAATCAAACAAAATTTTTTA+TGG + Chr8:85674600-85674619 None:intergenic 10.0%
!! AATAGATAATATACTATTAC+AGG - Chr8:85673544-85673563 MsG0880047394.01.T01:intron 15.0%
!! CACGATAAATAATTATTATA+TGG + Chr8:85675706-85675725 None:intergenic 15.0%
!! CATATAATAATTATTTATCG+TGG - Chr8:85675704-85675723 MsG0880047394.01.T01:intron 15.0%
!! TTTATAAAGTTAGATAGATA+TGG + Chr8:85675251-85675270 None:intergenic 15.0%
!!! AACTTTCTAATTTTTTTTTC+AGG - Chr8:85675977-85675996 MsG0880047394.01.T01:CDS 15.0%
!!! AACTTTTTTTAATGAGTTTT+GGG - Chr8:85674572-85674591 MsG0880047394.01.T01:intron 15.0%
!!! ACTGTTTAATTTAATTGTAT+TGG - Chr8:85673066-85673085 MsG0880047394.01.T01:intron 15.0%
!!! AGTAAAAATAGTAAATCTTT+TGG + Chr8:85672872-85672891 None:intergenic 15.0%
!!! TAAAGCAATAATTTCTTTTT+TGG - Chr8:85675825-85675844 MsG0880047394.01.T01:CDS 15.0%
!!! TAACTTTTTTTAATGAGTTT+TGG - Chr8:85674571-85674590 MsG0880047394.01.T01:intron 15.0%
!!! TTTATTAAATTTTATGTCAG+TGG + Chr8:85673809-85673828 None:intergenic 15.0%
!! AAAAAAGTTAGAACAATATG+AGG + Chr8:85674561-85674580 None:intergenic 20.0%
!! AAAAGAAAACGATAATTTCA+AGG + Chr8:85674280-85674299 None:intergenic 20.0%
!! AATGTGTTATACTTATGTTA+TGG + Chr8:85673724-85673743 None:intergenic 20.0%
!! AGGAATATATTGTAATTTAC+AGG - Chr8:85674879-85674898 MsG0880047394.01.T01:intron 20.0%
!! ATAAAAAGAGATAGAATCAT+GGG - Chr8:85674019-85674038 MsG0880047394.01.T01:intron 20.0%
!! GAATATATTGTAATTTACAG+GGG - Chr8:85674881-85674900 MsG0880047394.01.T01:intron 20.0%
!! GGAATATATTGTAATTTACA+GGG - Chr8:85674880-85674899 MsG0880047394.01.T01:intron 20.0%
!! TCTTATGTATGATATAATGT+TGG + Chr8:85674050-85674069 None:intergenic 20.0%
!! TTACTTATCTATATTCATCA+AGG - Chr8:85672005-85672024 MsG0880047394.01.T01:intron 20.0%
!!! AATAATTTCTTTTTTGGTAG+TGG - Chr8:85675831-85675850 MsG0880047394.01.T01:CDS 20.0%
!!! AGTTTTTTGCAATTTAGAAA+GGG + Chr8:85674334-85674353 None:intergenic 20.0%
!!! TCAGTTATGTTGTTTATTTT+AGG + Chr8:85673670-85673689 None:intergenic 20.0%
!!! TCTTACACAAAAGTATATAA+TGG - Chr8:85672429-85672448 MsG0880047394.01.T01:intron 20.0%
!!! TTTCTTTTGTAACATTATCA+GGG - Chr8:85674292-85674311 MsG0880047394.01.T01:intron 20.0%
!!! TTTTCTTTTGTAACATTATC+AGG - Chr8:85674291-85674310 MsG0880047394.01.T01:intron 20.0%
!!! TTTTTCTGTTGTAATAAACA+TGG + Chr8:85673481-85673500 None:intergenic 20.0%
! AACACCATAAGTTTAAAGAA+AGG + Chr8:85674805-85674824 None:intergenic 25.0%
! AAGACAAAGATAATGTGAAA+CGG - Chr8:85671647-85671666 MsG0880047394.01.T01:intron 25.0%
! AAGGATTTAGCTAAAATACA+GGG - Chr8:85675312-85675331 MsG0880047394.01.T01:intron 25.0%
! AAGTAAACTGATAATATGAG+AGG + Chr8:85671991-85672010 None:intergenic 25.0%
! AATAATTATTATATGGCCCT+TGG + Chr8:85675699-85675718 None:intergenic 25.0%
! AATGCTATTATGTTATTCCT+TGG - Chr8:85673930-85673949 MsG0880047394.01.T01:intron 25.0%
! ACATTTATCAGAAAATGAAG+TGG + Chr8:85673379-85673398 None:intergenic 25.0%
! AGTAAACTGATAATATGAGA+GGG + Chr8:85671990-85672009 None:intergenic 25.0%
! ATCCTATCATTAGATGTATA+GGG + Chr8:85672994-85673013 None:intergenic 25.0%
! GATAAAAAGAGATAGAATCA+TGG - Chr8:85674018-85674037 MsG0880047394.01.T01:intron 25.0%
! GTATTAGTAGTTTGAAGAAA+AGG - Chr8:85671728-85671747 MsG0880047394.01.T01:intron 25.0%
! GTTCAAATATTCTCTGATAA+AGG + Chr8:85672278-85672297 None:intergenic 25.0%
! TAATAAAAAATTCCAAGCAC+AGG - Chr8:85673822-85673841 MsG0880047394.01.T01:intron 25.0%
! TCTAAATTGCAAAAAACTCT+TGG - Chr8:85674336-85674355 MsG0880047394.01.T01:intron 25.0%
! TCTACAGTTAAATCGTATTT+CGG + Chr8:85673438-85673457 None:intergenic 25.0%
! TCTATGTGTAGAAAGAAATA+GGG - Chr8:85673905-85673924 MsG0880047394.01.T01:intron 25.0%
! TCTCGATTAAAAGATTCAAT+AGG + Chr8:85672533-85672552 None:intergenic 25.0%
! TCTTGTAAATGAGAATATCA+GGG - Chr8:85673187-85673206 MsG0880047394.01.T01:intron 25.0%
! TGAAATAAGTGTGAAAGAAA+TGG - Chr8:85672502-85672521 MsG0880047394.01.T01:CDS 25.0%
! TGGAATTTATCATGCTTAAA+AGG - Chr8:85673086-85673105 MsG0880047394.01.T01:intron 25.0%
! TGGTAAAAATACTTGTGAAA+GGG - Chr8:85675591-85675610 MsG0880047394.01.T01:intron 25.0%
! TGTTCCTTTCTTTAAACTTA+TGG - Chr8:85674798-85674817 MsG0880047394.01.T01:intron 25.0%
! TTCTATGTGTAGAAAGAAAT+AGG - Chr8:85673904-85673923 MsG0880047394.01.T01:intron 25.0%
! TTCTTGTAAATGAGAATATC+AGG - Chr8:85673186-85673205 MsG0880047394.01.T01:intron 25.0%
! TTGGTAAAAATACTTGTGAA+AGG - Chr8:85675590-85675609 MsG0880047394.01.T01:intron 25.0%
!! AACCTTACTTTCTAGAAATA+AGG - Chr8:85674859-85674878 MsG0880047394.01.T01:intron 25.0%
!! AGGATAGTTTTCAATGATTT+TGG + Chr8:85673613-85673632 None:intergenic 25.0%
!! ATAAGCATGATATATTTTCC+TGG - Chr8:85673867-85673886 MsG0880047394.01.T01:intron 25.0%
!! CACAAAAGTATATAATGGTA+AGG - Chr8:85672434-85672453 MsG0880047394.01.T01:intron 25.0%
!! GCATTAGACAAAAGTATAAT+GGG + Chr8:85673232-85673251 None:intergenic 25.0%
!! GGATAGTTTTCAATGATTTT+GGG + Chr8:85673612-85673631 None:intergenic 25.0%
!! TAAGCATGATATATTTTCCT+GGG - Chr8:85673868-85673887 MsG0880047394.01.T01:intron 25.0%
!! TAATATTGTCCAATTTCTAG+CGG + Chr8:85673047-85673066 None:intergenic 25.0%
!! TGCATTAGACAAAAGTATAA+TGG + Chr8:85673233-85673252 None:intergenic 25.0%
!! TTACTCTGCTGTAATAATTT+TGG - Chr8:85676083-85676102 MsG0880047394.01.T01:CDS 25.0%
!! TTTTCATCTGAAAATAGCAA+AGG - Chr8:85673345-85673364 MsG0880047394.01.T01:intron 25.0%
!!! AAGTTTTTGTTGTTGATTTC+AGG - Chr8:85676127-85676146 MsG0880047394.01.T01:CDS 25.0%
!!! ATTAAGTTGATTGTCCAAAA+TGG - Chr8:85672206-85672225 MsG0880047394.01.T01:intron 25.0%
!!! GAGTTTTTTGCAATTTAGAA+AGG + Chr8:85674335-85674354 None:intergenic 25.0%
!!! GTTTTTTGCAATTTAGAAAG+GGG + Chr8:85674333-85674352 None:intergenic 25.0%
!!! TCTTACAAGACTTTGAAATA+TGG + Chr8:85674688-85674707 None:intergenic 25.0%
!!! TTAAGTTGATTGTCCAAAAT+GGG - Chr8:85672207-85672226 MsG0880047394.01.T01:intron 25.0%
!!! TTCCTTATTTCTAGAAAGTA+AGG + Chr8:85674864-85674883 None:intergenic 25.0%
AAAAATCAAAGGGTGATTGA+TGG - Chr8:85676158-85676177 MsG0880047394.01.T01:CDS 30.0%
AACCAAGTAAACAAGAAGTT+GGG - Chr8:85675101-85675120 MsG0880047394.01.T01:CDS 30.0%
AACTCAAAATTAAGAGGTTG+TGG + Chr8:85671547-85671566 None:intergenic 30.0%
AAGGAGAAGTAATACTGAAT+TGG - Chr8:85671747-85671766 MsG0880047394.01.T01:intron 30.0%
AATATTCTCTGATAAAGGAC+AGG + Chr8:85672273-85672292 None:intergenic 30.0%
AATGATGAGAGAATCTACTT+TGG - Chr8:85675126-85675145 MsG0880047394.01.T01:CDS 30.0%
ACACCATATATCAGATTTAC+AGG - Chr8:85676007-85676026 MsG0880047394.01.T01:CDS 30.0%
AGAATATCGTTTATTTACCC+AGG + Chr8:85673888-85673907 None:intergenic 30.0%
AGACAAAGATAATGTGAAAC+GGG - Chr8:85671648-85671667 MsG0880047394.01.T01:intron 30.0%
AGGAGGATATGAAAAATCAA+AGG - Chr8:85676147-85676166 MsG0880047394.01.T01:CDS 30.0%
ATAAGTGTGAAAGAAATGGT+TGG - Chr8:85672506-85672525 MsG0880047394.01.T01:CDS 30.0%
ATATCGCAATATGCTTAACT+TGG + Chr8:85675627-85675646 None:intergenic 30.0%
ATGCTATTCATGAAAATGGA+TGG - Chr8:85671878-85671897 MsG0880047394.01.T01:CDS 30.0%
CAATTGAAACATGAGCATAT+AGG - Chr8:85673254-85673273 MsG0880047394.01.T01:intron 30.0%
CATCCTATCATTAGATGTAT+AGG + Chr8:85672995-85673014 None:intergenic 30.0%
CATGTAGAAAATCGCATTAT+AGG - Chr8:85674424-85674443 MsG0880047394.01.T01:intron 30.0%
CTATACATCTAATGATAGGA+TGG - Chr8:85672993-85673012 MsG0880047394.01.T01:intron 30.0%
CTTGGAAACTCAAAATTAAG+AGG + Chr8:85671553-85671572 None:intergenic 30.0%
CTTGTTCATAATTTATCCTG+TGG - Chr8:85674755-85674774 MsG0880047394.01.T01:CDS 30.0%
GAAGGATTTAGCTAAAATAC+AGG - Chr8:85675311-85675330 MsG0880047394.01.T01:intron 30.0%
GACAATGCATAAAATATGCA+AGG + Chr8:85675876-85675895 None:intergenic 30.0%
GGAATAAATAGAGCAATGAA+AGG + Chr8:85673649-85673668 None:intergenic 30.0%
GGAGGATATGAAAAATCAAA+GGG - Chr8:85676148-85676167 MsG0880047394.01.T01:CDS 30.0%
GTAATTGTGATCCAAAACAA+AGG + Chr8:85674258-85674277 None:intergenic 30.0%
GTTTCTAACACAATGAGAAA+AGG + Chr8:85673410-85673429 None:intergenic 30.0%
TAAGCATATTGCGATATCTT+TGG - Chr8:85675630-85675649 MsG0880047394.01.T01:intron 30.0%
TATCGCAATATGCTTAACTT+GGG + Chr8:85675626-85675645 None:intergenic 30.0%
TATGGTTATAGGCAAAAACA+AGG - Chr8:85675274-85675293 MsG0880047394.01.T01:intron 30.0%
TCTCCTGTAAATCTGATATA+TGG + Chr8:85676013-85676032 None:intergenic 30.0%
TTATAGGTGGTCAATATTCA+CGG - Chr8:85674440-85674459 MsG0880047394.01.T01:intron 30.0%
TTCCCTATACATCTAATGAT+AGG - Chr8:85672989-85673008 MsG0880047394.01.T01:intron 30.0%
TTGATTTCACACAATAAGCA+CGG + Chr8:85674400-85674419 None:intergenic 30.0%
TTGCTTAATCAGAGTAAAAC+TGG - Chr8:85672330-85672349 MsG0880047394.01.T01:CDS 30.0%
TTTCTCATTGTGTTAGAAAC+AGG - Chr8:85673410-85673429 MsG0880047394.01.T01:intron 30.0%
! AGATCTTTGTTTAGGAAGAT+GGG - Chr8:85675390-85675409 MsG0880047394.01.T01:intron 30.0%
! ATAATGCGATTTTCTACATG+TGG + Chr8:85674424-85674443 None:intergenic 30.0%
! ATGAAGAGAGATCTTTGTTT+AGG - Chr8:85675382-85675401 MsG0880047394.01.T01:intron 30.0%
! ATGTTAAGCATGAGATTTTC+AGG - Chr8:85675506-85675525 MsG0880047394.01.T01:intron 30.0%
! CACGGTTTGATAATATTCAT+GGG - Chr8:85674458-85674477 MsG0880047394.01.T01:intron 30.0%
! CAGATTCTGAATCATTTTGT+GGG + Chr8:85671618-85671637 None:intergenic 30.0%
! CTGTAGAAACTGTCTTTTTA+TGG - Chr8:85673451-85673470 MsG0880047394.01.T01:intron 30.0%
! CTTTTCATATTAGCAGAAAG+AGG + Chr8:85671934-85671953 None:intergenic 30.0%
! TAATGCGATTTTCTACATGT+GGG + Chr8:85674423-85674442 None:intergenic 30.0%
! TAGTTTTCAATGATTTTGGG+AGG + Chr8:85673609-85673628 None:intergenic 30.0%
! TCACGGTTTGATAATATTCA+TGG - Chr8:85674457-85674476 MsG0880047394.01.T01:intron 30.0%
! TCAGATTCTGAATCATTTTG+TGG + Chr8:85671619-85671638 None:intergenic 30.0%
! TGAAACTTGTTTATCCAACA+AGG - Chr8:85672744-85672763 MsG0880047394.01.T01:CDS 30.0%
! TTTGTAGTATTCGTGCATTT+TGG - Chr8:85674652-85674671 MsG0880047394.01.T01:CDS 30.0%
!! AGTTTTCAATGATTTTGGGA+GGG + Chr8:85673608-85673627 None:intergenic 30.0%
!! TACAAGACTTTGAAATATGG+TGG + Chr8:85674685-85674704 None:intergenic 30.0%
!!! ATTTCTTTTTTGGTAGTGGT+CGG - Chr8:85675835-85675854 MsG0880047394.01.T01:CDS 30.0%
!!! CTCTTAATTTTGAGTTTCCA+AGG - Chr8:85671551-85671570 MsG0880047394.01.T01:intron 30.0%
!!! CTGCTGTAATAATTTTGGTT+AGG - Chr8:85676088-85676107 MsG0880047394.01.T01:CDS 30.0%
!!! TTTACTATTTTTACTGCTGC+AGG - Chr8:85672877-85672896 MsG0880047394.01.T01:intron 30.0%
!!! TTTTTGTTGTTGATTTCAGG+AGG - Chr8:85676130-85676149 MsG0880047394.01.T01:CDS 30.0%
AACATGAGCATATAGGTAGA+TGG - Chr8:85673261-85673280 MsG0880047394.01.T01:intron 35.0%
AATCAGATGACCTAAGTCAA+TGG - Chr8:85674185-85674204 MsG0880047394.01.T01:intron 35.0%
ACATTCCTCGATATAACACT+AGG + Chr8:85672386-85672405 None:intergenic 35.0%
AGAATATCAGGGATGAGATT+AGG - Chr8:85673198-85673217 MsG0880047394.01.T01:intron 35.0%
ATGACCTAAGTCAATGGAAT+AGG - Chr8:85674191-85674210 MsG0880047394.01.T01:intron 35.0%
ATGCATTTGCAGAAATTGAC+TGG - Chr8:85674833-85674852 MsG0880047394.01.T01:intron 35.0%
ATTCACTTCAATATTGCCAC+AGG + Chr8:85674774-85674793 None:intergenic 35.0%
ATTCAGTGTAGAGTAGAGTT+TGG + Chr8:85676187-85676206 None:intergenic 35.0%
CAACCAAGTAAACAAGAAGT+TGG - Chr8:85675100-85675119 MsG0880047394.01.T01:CDS 35.0%
CACTTGACACTTAAATGCTT+TGG - Chr8:85674724-85674743 MsG0880047394.01.T01:CDS 35.0%
CAGAATTCACACACAAACTA+AGG - Chr8:85673520-85673539 MsG0880047394.01.T01:intron 35.0%
CATAAAATATGCAAGGTCCA+GGG + Chr8:85675869-85675888 None:intergenic 35.0%
CATTCCTCGATATAACACTA+GGG + Chr8:85672385-85672404 None:intergenic 35.0%
CTTAATCAGAGTAAAACTGG+AGG - Chr8:85672333-85672352 MsG0880047394.01.T01:CDS 35.0%
GAGAAATACCTTGAGTTCTT+CGG + Chr8:85673019-85673038 None:intergenic 35.0%
GAGAAGTAATACTGAATTGG+CGG - Chr8:85671750-85671769 MsG0880047394.01.T01:intron 35.0%
GGTAACAACAGATAGTCTTT+CGG + Chr8:85675230-85675249 None:intergenic 35.0%
GTAAAGTGTATCTGACTATC+TGG - Chr8:85673313-85673332 MsG0880047394.01.T01:intron 35.0%
GTAGAAAATCGCATTATAGG+TGG - Chr8:85674427-85674446 MsG0880047394.01.T01:intron 35.0%
GTGGATGCTATTCATGAAAA+TGG - Chr8:85671874-85671893 MsG0880047394.01.T01:CDS 35.0%
GTTAATGTCTCCAAATCAGT+TGG + Chr8:85675360-85675379 None:intergenic 35.0%
TAAACAAGTTTCACCCCATA+CGG + Chr8:85672737-85672756 None:intergenic 35.0%
TAGAAAACATGCATCTACAC+TGG - Chr8:85675555-85675574 MsG0880047394.01.T01:intron 35.0%
TAGAGCTATAGTAAAGCTGT+GGG - Chr8:85672927-85672946 MsG0880047394.01.T01:intron 35.0%
TATAAAACAACCCATCTGCT+TGG - Chr8:85673111-85673130 MsG0880047394.01.T01:intron 35.0%
TATAGGCAAAAACAAGGTTC+AGG - Chr8:85675280-85675299 MsG0880047394.01.T01:intron 35.0%
TCTCATAAACCGCTAGAAAT+TGG - Chr8:85673035-85673054 MsG0880047394.01.T01:intron 35.0%
TGAAAGGAGAAAGTGACTAT+AGG + Chr8:85673633-85673652 None:intergenic 35.0%
TGCATTTGCAGAAATTGACT+GGG - Chr8:85674834-85674853 MsG0880047394.01.T01:intron 35.0%
TGTTTGGGAAGCTAATTTGA+GGG + Chr8:85671450-85671469 None:intergenic 35.0%
TTCAGGGAATTGCCATAATT+AGG - Chr8:85673778-85673797 MsG0880047394.01.T01:intron 35.0%
TTTGTGTAAGATTCTACGCA+AGG + Chr8:85672420-85672439 None:intergenic 35.0%
! AAATTCTGGTGGTTCTGTTA+TGG - Chr8:85671678-85671697 MsG0880047394.01.T01:intron 35.0%
! AAGCGAGTTTAAAGCTTTCA+GGG - Chr8:85673762-85673781 MsG0880047394.01.T01:intron 35.0%
! ATAGCTGCAGTCAATCTTTT+GGG + Chr8:85674629-85674648 None:intergenic 35.0%
! CCATGGGAATTTTTGTGTTT+GGG + Chr8:85671465-85671484 None:intergenic 35.0%
! CTTTCGGAAGTTATTTCAGT+TGG + Chr8:85675214-85675233 None:intergenic 35.0%
! GAGATCTTTGTTTAGGAAGA+TGG - Chr8:85675389-85675408 MsG0880047394.01.T01:intron 35.0%
! GTGTAGATGCATGTTTTCTA+TGG + Chr8:85675555-85675574 None:intergenic 35.0%
! TAGTTTTTGTCTCTCAGTCA+GGG + Chr8:85674939-85674958 None:intergenic 35.0%
! TATAGCTGCAGTCAATCTTT+TGG + Chr8:85674630-85674649 None:intergenic 35.0%
! TTCCCAACTTCTTGTTTACT+TGG + Chr8:85675106-85675125 None:intergenic 35.0%
!! AAGTGATTTGCTGCAATTGA+AGG - Chr8:85674506-85674525 MsG0880047394.01.T01:intron 35.0%
!! AGTACCTATTCCATTGACTT+AGG + Chr8:85674198-85674217 None:intergenic 35.0%
!! TTAGTTTTTGTCTCTCAGTC+AGG + Chr8:85674940-85674959 None:intergenic 35.0%
!!! CATTTTGTGGGTGTTGTTTA+GGG + Chr8:85671606-85671625 None:intergenic 35.0%
!!! TAAGCATGAGATTTTCAGGT+AGG - Chr8:85675510-85675529 MsG0880047394.01.T01:intron 35.0%
!!! TCATTTTGTGGGTGTTGTTT+AGG + Chr8:85671607-85671626 None:intergenic 35.0%
!!! TTTCTTTTTTGGTAGTGGTC+GGG - Chr8:85675836-85675855 MsG0880047394.01.T01:CDS 35.0%
AACCTTCTGTTGGATGAGTT+GGG - Chr8:85672611-85672630 MsG0880047394.01.T01:CDS 40.0%
AACTGATAACACCCACTTGA+GGG + Chr8:85674093-85674112 None:intergenic 40.0%
AAGAGCTCATCAAATTCTCG+AGG - Chr8:85671951-85671970 MsG0880047394.01.T01:intron 40.0%
ACCAAGACTCTCGAATTTCT+TGG + Chr8:85673581-85673600 None:intergenic 40.0%
ACTTATGTTATGGCCGTTGT+GGG + Chr8:85673714-85673733 None:intergenic 40.0%
AGAAGACAAACCAGAACTAG+TGG - Chr8:85671496-85671515 MsG0880047394.01.T01:intron 40.0%
AGTTCCCTAGTGTTATATCG+AGG - Chr8:85672378-85672397 MsG0880047394.01.T01:intron 40.0%
ATCTGTAGACAAGGATACCA+AGG - Chr8:85675679-85675698 MsG0880047394.01.T01:intron 40.0%
ATGTCTCCAAATCAGTTGGA+AGG + Chr8:85675356-85675375 None:intergenic 40.0%
ATTCAGACTTCTTCCGTATG+GGG - Chr8:85672721-85672740 MsG0880047394.01.T01:CDS 40.0%
CAATTGCAGCAAATCACTTG+TGG + Chr8:85674505-85674524 None:intergenic 40.0%
CATGAGTGAAGAAGAATCGA+TGG - Chr8:85672574-85672593 MsG0880047394.01.T01:CDS 40.0%
CATGTCAGTCATTTCCTTGT+TGG + Chr8:85672761-85672780 None:intergenic 40.0%
CATTCAGACTTCTTCCGTAT+GGG - Chr8:85672720-85672739 MsG0880047394.01.T01:CDS 40.0%
CATTTGCAGAAATTGACTGG+GGG - Chr8:85674836-85674855 MsG0880047394.01.T01:intron 40.0%
CCCAAACACAAAAATTCCCA+TGG - Chr8:85671462-85671481 MsG0880047394.01.T01:CDS 40.0%
CTAGAGCTATAGTAAAGCTG+TGG - Chr8:85672926-85672945 MsG0880047394.01.T01:intron 40.0%
GCAAAAATAGCCATCAAACG+TGG - Chr8:85672964-85672983 MsG0880047394.01.T01:intron 40.0%
GCATAAAATATGCAAGGTCC+AGG + Chr8:85675870-85675889 None:intergenic 40.0%
GCATTTGCAGAAATTGACTG+GGG - Chr8:85674835-85674854 MsG0880047394.01.T01:intron 40.0%
GGAAGAAGTAGAGAACTTCA+AGG - Chr8:85672898-85672917 MsG0880047394.01.T01:intron 40.0%
GGTAATTGATCAGCATCAAC+AGG + Chr8:85672674-85672693 None:intergenic 40.0%
GTGTTTGGGAAGCTAATTTG+AGG + Chr8:85671451-85671470 None:intergenic 40.0%
GTTGCAGAGACTGAGAAATA+TGG - Chr8:85671795-85671814 MsG0880047394.01.T01:intron 40.0%
TAAAATTTCACCTCGAGCCA+AGG + Chr8:85673950-85673969 None:intergenic 40.0%
TAATGGTAAGGAGAATGCTG+TGG - Chr8:85672446-85672465 MsG0880047394.01.T01:intron 40.0%
TACTTATGTTATGGCCGTTG+TGG + Chr8:85673715-85673734 None:intergenic 40.0%
TATTGAGCTTCAAAGACGAG+AGG - Chr8:85675799-85675818 MsG0880047394.01.T01:CDS 40.0%
TCAGTGGCATAGCCTAATTA+TGG + Chr8:85673793-85673812 None:intergenic 40.0%
TCCAAGAAATTCGAGAGTCT+TGG - Chr8:85673577-85673596 MsG0880047394.01.T01:intron 40.0%
TCTGTAGACAAGGATACCAA+GGG - Chr8:85675680-85675699 MsG0880047394.01.T01:intron 40.0%
TGATCAGCATCAACAGGTAA+GGG + Chr8:85672668-85672687 None:intergenic 40.0%
TGCTGGTATTACTCAGGAAT+TGG - Chr8:85671852-85671871 MsG0880047394.01.T01:CDS 40.0%
TGGACAATTCAGTGGATGTT+GGG - Chr8:85672466-85672485 MsG0880047394.01.T01:CDS 40.0%
TGGTATTACTCAGGAATTGG+TGG - Chr8:85671855-85671874 MsG0880047394.01.T01:CDS 40.0%
TTCACACAATAAGCACGGTA+TGG + Chr8:85674395-85674414 None:intergenic 40.0%
TTGAAGGATAAGCCTGAATG+TGG - Chr8:85674522-85674541 MsG0880047394.01.T01:intron 40.0%
TTGATCAGCATCAACAGGTA+AGG + Chr8:85672669-85672688 None:intergenic 40.0%
TTGTTAACCTTCCCTCAAGT+GGG - Chr8:85674079-85674098 MsG0880047394.01.T01:intron 40.0%
TTTGTTAACCTTCCCTCAAG+TGG - Chr8:85674078-85674097 MsG0880047394.01.T01:intron 40.0%
! ACTCTTTTAGTCAACAGCCA+AGG + Chr8:85673143-85673162 None:intergenic 40.0%
! AGACTCTGCAGAGTATTTGA+AGG - Chr8:85672550-85672569 MsG0880047394.01.T01:CDS 40.0%
! AGCTTTATGCTTAGCTGCTT+TGG - Chr8:85675463-85675482 MsG0880047394.01.T01:intron 40.0%
! ATATCTTTGGAAGCTGAGAG+TGG - Chr8:85675643-85675662 MsG0880047394.01.T01:intron 40.0%
! CAAGCGAGTTTAAAGCTTTC+AGG - Chr8:85673761-85673780 MsG0880047394.01.T01:intron 40.0%
! CTGAATGGTGTTTTATACCC+TGG + Chr8:85672707-85672726 None:intergenic 40.0%
! CTTCGTGACAACAAGCTTTT+GGG + Chr8:85675761-85675780 None:intergenic 40.0%
! GCCATGGGAATTTTTGTGTT+TGG + Chr8:85671466-85671485 None:intergenic 40.0%
! TCTTCGTGACAACAAGCTTT+TGG + Chr8:85675762-85675781 None:intergenic 40.0%
! TTATGTTATTCCTTGGCTCG+AGG - Chr8:85673937-85673956 MsG0880047394.01.T01:intron 40.0%
! TTGTGAGGTATGACCCATTT+TGG + Chr8:85672223-85672242 None:intergenic 40.0%
!! CTTCTTGTTGTTGTTGCCAT+GGG + Chr8:85671481-85671500 None:intergenic 40.0%
!! GAGTAAAACTGGAGGTATTG+TGG - Chr8:85672341-85672360 MsG0880047394.01.T01:CDS 40.0%
!! TCTTCTTGTTGTTGTTGCCA+TGG + Chr8:85671482-85671501 None:intergenic 40.0%
!! TTGGCTCGAGGTGAAATTTT+AGG - Chr8:85673949-85673968 MsG0880047394.01.T01:intron 40.0%
!!! TTCTTTTTTGGTAGTGGTCG+GGG - Chr8:85675837-85675856 MsG0880047394.01.T01:CDS 40.0%
AAACGGGTACAGCGAAATTC+TGG - Chr8:85671664-85671683 MsG0880047394.01.T01:intron 45.0%
AAATCAGTTGGAAGGTCTGC+TGG + Chr8:85675348-85675367 None:intergenic 45.0%
AACTGTTCTCCAACAAGACG+AGG - Chr8:85674958-85674977 MsG0880047394.01.T01:CDS 45.0%
AAGGTTCAGGAAGTCTGAGA+AGG - Chr8:85675293-85675312 MsG0880047394.01.T01:intron 45.0%
AATCAGTTGGAAGGTCTGCT+GGG + Chr8:85675347-85675366 None:intergenic 45.0%
AATTACCTGCTGTGGTTCCA+GGG - Chr8:85672687-85672706 MsG0880047394.01.T01:CDS 45.0%
AATTCAGTGGATGTTGGGAG+TGG - Chr8:85672471-85672490 MsG0880047394.01.T01:CDS 45.0%
ACACTGGAAATATCGCGAGT+TGG - Chr8:85675571-85675590 MsG0880047394.01.T01:intron 45.0%
AGAGAGCTTCTTGCATACCA+AGG + Chr8:85672819-85672838 None:intergenic 45.0%
AGCACGGTATGGTAAGTTCA+AGG + Chr8:85674384-85674403 None:intergenic 45.0%
AGCAGACCTTCCAACTGATT+TGG - Chr8:85675347-85675366 MsG0880047394.01.T01:intron 45.0%
AGGAAATGACTGACATGCGT+AGG - Chr8:85672764-85672783 MsG0880047394.01.T01:CDS 45.0%
AGTCTCTGCAACTCATGTTC+CGG + Chr8:85671787-85671806 None:intergenic 45.0%
ATAGGGAACTCCACGTTTGA+TGG + Chr8:85672977-85672996 None:intergenic 45.0%
CAACCTTCTGTTGGATGAGT+TGG - Chr8:85672610-85672629 MsG0880047394.01.T01:CDS 45.0%
CAACTGATAACACCCACTTG+AGG + Chr8:85674094-85674113 None:intergenic 45.0%
CAGAATGTGTGTGACTTTCG+TGG - Chr8:85674226-85674245 MsG0880047394.01.T01:intron 45.0%
CCATACGGAAGAAGTCTGAA+TGG + Chr8:85672722-85672741 None:intergenic 45.0%
CCATTCAGACTTCTTCCGTA+TGG - Chr8:85672719-85672738 MsG0880047394.01.T01:CDS 45.0%
CTTTCTCTTCCTCGTCTTGT+TGG + Chr8:85674970-85674989 None:intergenic 45.0%
GAATGCTGTGGACAATTCAG+TGG - Chr8:85672458-85672477 MsG0880047394.01.T01:CDS 45.0%
GACTGAGAAATATGGCGTTG+AGG - Chr8:85671803-85671822 MsG0880047394.01.T01:intron 45.0%
GAGAGCTTCTTGCATACCAA+GGG + Chr8:85672818-85672837 None:intergenic 45.0%
GATCGAACTCAACCTTCTGT+TGG - Chr8:85672601-85672620 MsG0880047394.01.T01:CDS 45.0%
GCGTAGGATTGCTAGAAGAA+CGG - Chr8:85672780-85672799 MsG0880047394.01.T01:CDS 45.0%
GGTGCTAGTATCTGTAGACA+AGG - Chr8:85675670-85675689 MsG0880047394.01.T01:intron 45.0%
GTGGACAATTCAGTGGATGT+TGG - Chr8:85672465-85672484 MsG0880047394.01.T01:CDS 45.0%
TCATACCTCACAATGCAGTG+TGG - Chr8:85672230-85672249 MsG0880047394.01.T01:CDS 45.0%
TCTCAAATGCCGTTACTTGC+TGG - Chr8:85675034-85675053 MsG0880047394.01.T01:CDS 45.0%
TGAGCTTAGCTCAGTTGGTT+GGG + Chr8:85675898-85675917 None:intergenic 45.0%
TGCATGCAAGAACCACATTC+AGG + Chr8:85674537-85674556 None:intergenic 45.0%
TGCTGATCAATTACCTGCTG+TGG - Chr8:85672679-85672698 MsG0880047394.01.T01:CDS 45.0%
TGGAGTTGCTGGTATTACTC+AGG - Chr8:85671846-85671865 MsG0880047394.01.T01:CDS 45.0%
TGTGGTTGTTCCACTAGTTC+TGG + Chr8:85671509-85671528 None:intergenic 45.0%
TTCATGGGAGTGAGTTGCTA+TGG - Chr8:85674473-85674492 MsG0880047394.01.T01:intron 45.0%
! AAATATGGCGTTGAGGATGG+TGG - Chr8:85671810-85671829 MsG0880047394.01.T01:intron 45.0%
! ACTTGGTTGATGTCCCCAAT+TGG + Chr8:85675089-85675108 None:intergenic 45.0%
! ATTGGCGGAGAAGTTGATTC+CGG - Chr8:85671765-85671784 MsG0880047394.01.T01:intron 45.0%
! CTTTTAGTCAACAGCCAAGG+AGG + Chr8:85673140-85673159 None:intergenic 45.0%
! GAGAAATATGGCGTTGAGGA+TGG - Chr8:85671807-85671826 MsG0880047394.01.T01:intron 45.0%
! TTCCAAGGCGTTTATCTCCT+TGG - Chr8:85671566-85671585 MsG0880047394.01.T01:intron 45.0%
! TTGTCTCTCAGTCAGGGTTT+TGG + Chr8:85674933-85674952 None:intergenic 45.0%
!! AAACTGGAGGTATTGTGGTG+TGG - Chr8:85672346-85672365 MsG0880047394.01.T01:CDS 45.0%
!! AAGCTTGTTGTCACGAAGAC+AGG - Chr8:85675763-85675782 MsG0880047394.01.T01:CDS 45.0%
!! CTTTTGGGTCTCATAACCTG+TGG + Chr8:85675746-85675765 None:intergenic 45.0%
!!! CATGAGATTTTCAGGTAGGC+GGG - Chr8:85675514-85675533 MsG0880047394.01.T01:intron 45.0%
!!! GCATGAGATTTTCAGGTAGG+CGG - Chr8:85675513-85675532 MsG0880047394.01.T01:intron 45.0%
AGAGGTTGTGGTGTTCCTCT+TGG + Chr8:85671535-85671554 None:intergenic 50.0%
AGCAACCACACTGCATTGTG+AGG + Chr8:85672238-85672257 None:intergenic 50.0%
CAATTACCTGCTGTGGTTCC+AGG - Chr8:85672686-85672705 MsG0880047394.01.T01:CDS 50.0%
CTACCTAAACCTGCCCACAA+CGG - Chr8:85673698-85673717 MsG0880047394.01.T01:intron 50.0%
GAAGAACTACTTCCGTCCAC+AGG - Chr8:85675727-85675746 MsG0880047394.01.T01:intron 50.0%
GACCCAACTCATCCAACAGA+AGG + Chr8:85672616-85672635 None:intergenic 50.0%
GAGGTTGTGGTGTTCCTCTT+GGG + Chr8:85671534-85671553 None:intergenic 50.0%
GATAACACCCACTTGAGGGA+AGG + Chr8:85674089-85674108 None:intergenic 50.0%
GCAAGGGTTCCAGCAAGTAA+CGG + Chr8:85675046-85675065 None:intergenic 50.0%
GCAGTCAACTTACCTGTGCT+TGG + Chr8:85673837-85673856 None:intergenic 50.0%
GGAACAACCACAATCCCAAG+AGG - Chr8:85671517-85671536 MsG0880047394.01.T01:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG + Chr8:85675899-85675918 None:intergenic 50.0%
GTTGTCACGAAGACAGGCAT+TGG - Chr8:85675769-85675788 MsG0880047394.01.T01:CDS 50.0%
TAGGATGGCCGAAGAACTCA+AGG - Chr8:85673008-85673027 MsG0880047394.01.T01:intron 50.0%
TGCATACCAAGGGCAAAGTG+TGG + Chr8:85672808-85672827 None:intergenic 50.0%
TGCCAAGGAGATAAACGCCT+TGG + Chr8:85671571-85671590 None:intergenic 50.0%
TGGAACCCTTGCTGAGACTA+GGG - Chr8:85675054-85675073 MsG0880047394.01.T01:CDS 50.0%
TGGGTCTCATAACCTGTGGA+CGG + Chr8:85675742-85675761 None:intergenic 50.0%
TGGTGTTCCTCTTGGGATTG+TGG + Chr8:85671527-85671546 None:intergenic 50.0%
TTATACCCTGGAACCACAGC+AGG + Chr8:85672695-85672714 None:intergenic 50.0%
TTCTACGCAAGGCAGCTTGT+AGG + Chr8:85672409-85672428 None:intergenic 50.0%
TTTGGAAGCTGAGAGTGGTG+GGG - Chr8:85675648-85675667 MsG0880047394.01.T01:intron 50.0%
! AGGTATTGTGGTGTGGCGAT+CGG - Chr8:85672353-85672372 MsG0880047394.01.T01:intron 50.0%
! AGGTTCAGTGTTGGAGTTGC+TGG - Chr8:85671835-85671854 MsG0880047394.01.T01:CDS 50.0%
! ATGGTGGAGAGGTTCAGTGT+TGG - Chr8:85671826-85671845 MsG0880047394.01.T01:intron 50.0%
! CTTTGGAAGCTGAGAGTGGT+GGG - Chr8:85675647-85675666 MsG0880047394.01.T01:intron 50.0%
! TCTTTGGAAGCTGAGAGTGG+TGG - Chr8:85675646-85675665 MsG0880047394.01.T01:intron 50.0%
! TGGTTGATGTCCCCAATTGG+CGG + Chr8:85675086-85675105 None:intergenic 50.0%
!! CCTGTCCAATCTTTGAAGCG+CGG + Chr8:85672638-85672657 None:intergenic 50.0%
AAGGAGGTCGCCAAGCAGAT+GGG + Chr8:85673124-85673143 None:intergenic 55.0%
ATGTTATGGCCGTTGTGGGC+AGG + Chr8:85673710-85673729 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG - Chr8:85675900-85675919 MsG0880047394.01.T01:CDS 55.0%
CCGCGCTTCAAAGATTGGAC+AGG - Chr8:85672635-85672654 MsG0880047394.01.T01:CDS 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + Chr8:85675903-85675922 None:intergenic 55.0%
CGGGTACAGCGAAATTCTGG+TGG - Chr8:85671667-85671686 MsG0880047394.01.T01:intron 55.0%
CTGGAACCCTTGCTGAGACT+AGG - Chr8:85675053-85675072 MsG0880047394.01.T01:CDS 55.0%
GCGTTTATCTCCTTGGCACG+TGG - Chr8:85671573-85671592 MsG0880047394.01.T01:intron 55.0%
GGTAGGCGGGATGTTTATGC+TGG - Chr8:85675527-85675546 MsG0880047394.01.T01:intron 55.0%
GGTATTGTGGTGTGGCGATC+GGG - Chr8:85672354-85672373 MsG0880047394.01.T01:intron 55.0%
TAGGGCAGCAACCGCCAATT+GGG - Chr8:85675072-85675091 MsG0880047394.01.T01:CDS 55.0%
TGCTGCCCTAGTCTCAGCAA+GGG + Chr8:85675062-85675081 None:intergenic 55.0%
TGGGTCCGCGCTTCAAAGAT+TGG - Chr8:85672630-85672649 MsG0880047394.01.T01:CDS 55.0%
TTGCTGCCCTAGTCTCAGCA+AGG + Chr8:85675063-85675082 None:intergenic 55.0%
TTGGAAGCTGAGAGTGGTGG+GGG - Chr8:85675649-85675668 MsG0880047394.01.T01:intron 55.0%
!! AGGGTTTTGGTGACAGCAGG+AGG + Chr8:85674920-85674939 None:intergenic 55.0%
!! CGTGGCGTCTGCCTTTGTTT+TGG - Chr8:85674244-85674263 MsG0880047394.01.T01:intron 55.0%
!! GTCAGGGTTTTGGTGACAGC+AGG + Chr8:85674923-85674942 None:intergenic 55.0%
AGGGCAGCAACCGCCAATTG+GGG - Chr8:85675073-85675092 MsG0880047394.01.T01:CDS 60.0%
AGTGGTCGGGGTTTGAACCC+TGG - Chr8:85675849-85675868 MsG0880047394.01.T01:CDS 60.0%
CAAGGAGGTCGCCAAGCAGA+TGG + Chr8:85673125-85673144 None:intergenic 60.0%
CATCTGCTTGGCGACCTCCT+TGG - Chr8:85673123-85673142 MsG0880047394.01.T01:intron 60.0%
CTAGGGCAGCAACCGCCAAT+TGG - Chr8:85675071-85675090 MsG0880047394.01.T01:CDS 60.0%
TGGCCGTTGTGGGCAGGTTT+AGG + Chr8:85673704-85673723 None:intergenic 60.0%
! GGGTTTTCTGCCACGTGCCA+AGG + Chr8:85671586-85671605 None:intergenic 60.0%
!! TGGCGTTGAGGATGGTGGAG+AGG - Chr8:85671815-85671834 MsG0880047394.01.T01:intron 60.0%
ACGGCGCCACACTTTGCCCT+TGG - Chr8:85672799-85672818 MsG0880047394.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 85671442 85676208 85671442 ID=MsG0880047394.01;Name=MsG0880047394.01
Chr8 mRNA 85671442 85676208 85671442 ID=MsG0880047394.01.T01;Parent=MsG0880047394.01;Name=MsG0880047394.01.T01;_AED=0.36;_eAED=0.41;_QI=0|0|0|1|1|1|9|0|535
Chr8 exon 85675751 85676208 85675751 ID=MsG0880047394.01.T01:exon:1942;Parent=MsG0880047394.01.T01
Chr8 exon 85674942 85675172 85674942 ID=MsG0880047394.01.T01:exon:1941;Parent=MsG0880047394.01.T01
Chr8 exon 85674621 85674774 85674621 ID=MsG0880047394.01.T01:exon:1940;Parent=MsG0880047394.01.T01
Chr8 exon 85672455 85672805 85672455 ID=MsG0880047394.01.T01:exon:1939;Parent=MsG0880047394.01.T01
Chr8 exon 85672209 85672365 85672209 ID=MsG0880047394.01.T01:exon:1938;Parent=MsG0880047394.01.T01
Chr8 exon 85672058 85672122 85672058 ID=MsG0880047394.01.T01:exon:1937;Parent=MsG0880047394.01.T01
Chr8 exon 85671830 85671901 85671830 ID=MsG0880047394.01.T01:exon:1936;Parent=MsG0880047394.01.T01
Chr8 exon 85671592 85671651 85671592 ID=MsG0880047394.01.T01:exon:1935;Parent=MsG0880047394.01.T01
Chr8 exon 85671442 85671501 85671442 ID=MsG0880047394.01.T01:exon:1934;Parent=MsG0880047394.01.T01
Chr8 CDS 85675751 85676208 85675751 ID=MsG0880047394.01.T01:cds;Parent=MsG0880047394.01.T01
Chr8 CDS 85674942 85675172 85674942 ID=MsG0880047394.01.T01:cds;Parent=MsG0880047394.01.T01
Chr8 CDS 85674621 85674774 85674621 ID=MsG0880047394.01.T01:cds;Parent=MsG0880047394.01.T01
Chr8 CDS 85672455 85672805 85672455 ID=MsG0880047394.01.T01:cds;Parent=MsG0880047394.01.T01
Chr8 CDS 85672209 85672365 85672209 ID=MsG0880047394.01.T01:cds;Parent=MsG0880047394.01.T01
Chr8 CDS 85672058 85672122 85672058 ID=MsG0880047394.01.T01:cds;Parent=MsG0880047394.01.T01
Chr8 CDS 85671830 85671901 85671830 ID=MsG0880047394.01.T01:cds;Parent=MsG0880047394.01.T01
Chr8 CDS 85671592 85671651 85671592 ID=MsG0880047394.01.T01:cds;Parent=MsG0880047394.01.T01
Chr8 CDS 85671442 85671501 85671442 ID=MsG0880047394.01.T01:cds;Parent=MsG0880047394.01.T01
Gene Sequence

>MsG0880047394.01.T01

ATGGTCCCTCAAATTAGCTTCCCAAACACAAAAATTCCCATGGCAACAACAACAAGAAGACAAACCAGAACTAGTGGAACAACCACAATCCCAAGAGGAACACCACAACCTCTTAATTTTGAGTTTCCAAGGCGTTTATCTCCTTGGCACGTGGCAGAAAACCCTAAACAACACCCACAAAATGATTCAGAATCTGATGCTTCTGAAGACAAAGATAATGTGAAACGGGTACAGCGAAATTCTGGTGGTTCTGTTATGGAAAGAGAGTTTGAAGAATCAGAAAGTAGTATTAGTAGTTTGAAGAAAAGGAGAAGTAATACTGAATTGGCGGAGAAGTTGATTCCGGAACATGAGTTGCAGAGACTGAGAAATATGGCGTTGAGGATGGTGGAGAGGTTCAGTGTTGGAGTTGCTGGTATTACTCAGGAATTGGTGGATGCTATTCATGAAAATGGATGTGGATGTTGGGAGTGGAGAAGTGCTGAAATAAGTGTGAAAGAAATGGTTGGACCTATTGAATCTTTTAATCGAGACTCTGCAGAGTATTTGAAGGACATGAGTGAAGAAGAATCGATGGAATTGATCGAACTCAACCTTCTGTTGGATGAGTTGGGTCCGCGCTTCAAAGATTGGACAGGACGTGAGCCCTTACCTGTTGATGCTGATCAATTACCTGCTGTGGTTCCAGGATTTACTATTTTTACTGCTGCAGGAAGAAGTAGAGAACTTCAAGGTCTAGCTAGAGCTATAGTAAAGCTGTGGGAAACAAGCGCTATTGCAAAAATAGCCATCAAACGTGGAGTTCCCTATACATCTAATGATAGGATGGCCGAAGAACTCAAGAAATTGACTGGGGGAACCTTACTTTCTAGAAATAAGGAATATATTGTAATTTACAGGGGAAATGACTTCTTGCCTCCTGCTGTCACCAAAACCCTGACTGAGAGACAAAAACTAACTGTTCTCCAACAAGACGAGGAAGAGAAAGCACGTCAAAATGCTTCATCGATTACTTTATCAAATAGCAAATCATCTCAAATGCCGTTACTTGCTGGAACCCTTGCTGAGACTAGGGCAGCAACCGCCAATTGGGGACATCAACCAAGTAAACAAGAAGTTGGGAAAATGATGAGAGAATCTACTTTGGATAGACTTTCTTCTTTAATCAGAAATCATGAGAGTAAACTAGCTCTAGCAAAAACAAGGTTCAGGAAGTCTGAGAAGGATTTAGCTAAAATACAGGGTGATTTTGACCCAGCAGACCTTCCAACTGATTTGGAGACATTAACTAATGAAGAGAGATCTTTGTTTAGGAAGATGGGTCTGAGTATGAAGCCATACTTACTTCTAGGTAGGCGGGATGTTTATGCTGGCACCATAGAAAACATGCATCTACACTGGAAATATCGCGAGTTGGTTATGAGACCCAAAAGCTTGTTGTCACGAAGACAGGCATTGGCTCGATCTATTGAGCTTCAAAGACGAGAGGCACTAAAACACCATATATCAGATTTACAGGAGATGATTGAGTTGCTCAAATCTGAGCTAGAGGATATGAAAAATCAAAGGGTGATTGATGGTGACCAAACTCTACTCTACACTGAATAA

Protein sequence

>MsG0880047394.01.T01

MVPQISFPNTKIPMATTTRRQTRTSGTTTIPRGTPQPLNFEFPRRLSPWHVAENPKQHPQNDSESDASEDKDNVKRVQRNSGGSVMEREFEESESSISSLKKRRSNTELAEKLIPEHELQRLRNMALRMVERFSVGVAGITQELVDAIHENGCGCWEWRSAEISVKEMVGPIESFNRDSAEYLKDMSEEESMELIELNLLLDELGPRFKDWTGREPLPVDADQLPAVVPGFTIFTAAGRSRELQGLARAIVKLWETSAIAKIAIKRGVPYTSNDRMAEELKKLTGGTLLSRNKEYIVIYRGNDFLPPAVTKTLTERQKLTVLQQDEEEKARQNASSITLSNSKSSQMPLLAGTLAETRAATANWGHQPSKQEVGKMMRESTLDRLSSLIRNHESKLALAKTRFRKSEKDLAKIQGDFDPADLPTDLETLTNEERSLFRKMGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVMRPKSLLSRRQALARSIELQRREALKHHISDLQEMIELLKSELEDMKNQRVIDGDQTLLYTE*