AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035045.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035045.01.T01 MTR_6g079520 75.312 320 37 7 6 289 235 548 2.60e-73 235
MsG0680035045.01.T01 MTR_8g106980 41.554 296 114 16 1 278 145 399 1.33e-32 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 118 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGCTGGTGGTGTTGTTTC+GGG 0.235709 6:+98164950 MsG0680035045.01.T01:CDS
AATCCGCTGGCTCCATCTTT+TGG 0.251601 6:+98165261 MsG0680035045.01.T01:CDS
TACTGCTGGTGGTGTTGTTT+CGG 0.264432 6:+98164949 MsG0680035045.01.T01:CDS
ACAGCATTCACATTCTTTCT+TGG 0.271909 6:-98165117 None:intergenic
AAACTCTCCGGCTGAATCTT+TGG 0.326538 6:-98164905 None:intergenic
GAGAGTTTCACTCCGGCTTC+TGG 0.331162 6:+98164920 MsG0680035045.01.T01:CDS
AAACCGGACCACCTTGAATT+GGG 0.338864 6:-98164802 None:intergenic
GCTGGTAGAGCTGTGGTTGC+TGG 0.350058 6:-98169687 MsG0680035046.01.T01:CDS
GAAACCGGACCACCTTGAAT+TGG 0.359913 6:-98164803 None:intergenic
GTTGCTGCGGTTGCTGCTAC+TGG 0.366886 6:+98165153 MsG0680035045.01.T01:CDS
TCTGCTGTGGCGGTGGTGGC+TGG 0.367933 6:-98169705 MsG0680035046.01.T01:CDS
AGAGGCCGCGGTGGTGTTGC+TGG 0.379015 6:+98165195 MsG0680035045.01.T01:CDS
AAAATCTAATAATCACTTAA+GGG 0.379868 6:-98169992 None:intergenic
TTGCAGTGACTGGACTTTCA+TGG 0.386606 6:-98169414 None:intergenic
TTCACTCCGGCTTCTGGTAC+TGG 0.387627 6:+98164926 MsG0680035045.01.T01:CDS
ACAACTGCGGCTGCTGTTGC+TGG 0.401022 6:-98169663 MsG0680035046.01.T01:CDS
CTGATTCCTAAGGATGAAAC+TGG 0.404718 6:-98169729 MsG0680035046.01.T01:CDS
CTTGGCCTTCCTCTAGATCT+CGG 0.425337 6:-98165099 None:intergenic
TGGTTCTGCTGTGGCGGTGG+TGG 0.425860 6:-98169709 MsG0680035046.01.T01:CDS
CCAACCAGCATGGACAATAA+TGG 0.430964 6:-98170082 None:intergenic
CGCGGTGGTGTTGCTGGAAG+AGG 0.431055 6:+98165201 MsG0680035045.01.T01:CDS
TTACATGGCCAGTGGTCAAT+TGG 0.433175 6:+98169768 MsG0680035045.01.T01:three_prime_UTR
TGAATCTTTGGTGGACGTCC+TGG 0.435337 6:-98164893 None:intergenic
CGTGGTGGTGGTCGTGGAAG+AGG 0.438501 6:+98165225 MsG0680035045.01.T01:CDS
GCAGAACCAGTTTCATCCTT+AGG 0.440707 6:+98169723 MsG0680035045.01.T01:CDS
TTTGCAGCAAGGAAAAGTTA+AGG 0.441803 6:+98169360 MsG0680035045.01.T01:intron
AGAGGCAGAGGACGTGGAAG+AGG 0.449151 6:+98165177 MsG0680035045.01.T01:CDS
GGAAGTTGTTGTTGCGGTGG+TGG 0.449350 6:-98169571 MsG0680035046.01.T01:CDS
GTAGCAGCAACCGCAGCAAC+CGG 0.451275 6:-98165150 None:intergenic
GCGGTTGCTGCTACTGGTAG+AGG 0.462554 6:+98165159 MsG0680035045.01.T01:CDS
ACAGTGCAGGCTGGAGTGGA+AGG 0.463262 6:+98165061 MsG0680035045.01.T01:CDS
GAATGCTGTTGCTGCTGTGC+CGG 0.466666 6:+98165131 MsG0680035045.01.T01:CDS
AGAGGACGTGGTGGTGGTCG+TGG 0.466719 6:+98165219 MsG0680035045.01.T01:CDS
AGTCCTCCAGCCCCAATTCA+AGG 0.471673 6:+98164791 MsG0680035045.01.T01:CDS
AGGGACAGTGCAGGCTGGAG+TGG 0.474513 6:+98165057 MsG0680035045.01.T01:CDS
GGATCTTAATGAACCGCTAA+AGG 0.483006 6:+98169474 MsG0680035045.01.T01:CDS
AGCCCCAATTCAAGGTGGTC+CGG 0.483344 6:+98164799 MsG0680035045.01.T01:CDS
GCGGCTGCTGTTGCTGGTAA+TGG 0.484292 6:-98169657 MsG0680035046.01.T01:CDS
CGAGGGAGAGGACGTCCTCC+TGG 0.484542 6:+98164845 MsG0680035045.01.T01:CDS
TGCTGCTGTGCCGGTTGCTG+CGG 0.493146 6:+98165140 MsG0680035045.01.T01:CDS
GTGGCTGATCTTGTGCCGAC+AGG 0.497294 6:-98169522 MsG0680035046.01.T01:CDS
TGGTTGTGATTTGTGAATCT+AGG 0.498432 6:+98169788 MsG0680035045.01.T01:three_prime_UTR
TGTTGTTGCGGTGGTGGTTG+TGG 0.500394 6:-98169565 MsG0680035046.01.T01:CDS
AACTGGTTCTGCTGTGGCGG+TGG 0.501527 6:-98169712 MsG0680035046.01.T01:CDS
TGCGGGTGTGCCACAATTTG+TGG 0.503528 6:-98169598 MsG0680035046.01.T01:CDS
TAGCGGTTCATTAAGATCCA+TGG 0.506049 6:-98169470 None:intergenic
CTAGCTGATGCTGATTCCTA+AGG 0.506339 6:-98169739 None:intergenic
CAGGAAGGGACAGTGCAGGC+TGG 0.510635 6:+98165052 MsG0680035045.01.T01:intron
GGAAGTGTTTCATCCTTTAG+CGG 0.512971 6:-98169487 MsG0680035046.01.T01:CDS
AGGAATCTCTTTCCGCACTT+AGG 0.518806 6:+98169380 MsG0680035045.01.T01:CDS
GGAGCCAGCGGATTAAGTCT+AGG 0.523014 6:-98165252 None:intergenic
ACTACACCGTCTCGAGGGAG+AGG 0.527619 6:+98164833 MsG0680035045.01.T01:CDS
TCTGGAGCACTAGCAGTAGC+AGG 0.528446 6:-98169197 None:intergenic
ACTGGTAGAGGCAGAGGACG+TGG 0.528960 6:+98165171 MsG0680035045.01.T01:CDS
TTTGATTTAGATTTCGAACC+AGG 0.531146 6:-98164863 None:intergenic
CTCTCCGGCTGAATCTTTGG+TGG 0.536197 6:-98164902 None:intergenic
GGACTTTCATGGTTAAAATG+AGG 0.537731 6:-98169403 None:intergenic
GGTGTAGTTGAAACTGAAAC+CGG 0.539320 6:-98164818 None:intergenic
GCTTCTGGTACTGGTACTGC+TGG 0.545837 6:+98164935 MsG0680035045.01.T01:CDS
TGTGCCACAATTTGTGGTGG+TGG 0.546358 6:-98169592 MsG0680035046.01.T01:CDS
GCCGACAGGTTCTGCTGCTG+TGG 0.546677 6:-98169508 MsG0680035046.01.T01:CDS
GAGCCAGCGGATTAAGTCTA+GGG 0.546855 6:-98165251 None:intergenic
AGAGGACGTGGAAGAGGCCG+CGG 0.547534 6:+98165183 MsG0680035045.01.T01:CDS
GGACCACCTTGAATTGGGGC+TGG 0.547890 6:-98164797 None:intergenic
GGTGTTGCTGGAAGAGGACG+TGG 0.552009 6:+98165207 MsG0680035045.01.T01:CDS
ATTGCCGCAATTGCAGTGAC+TGG 0.552140 6:-98169424 None:intergenic
ACTTCCACCACCACAAATTG+TGG 0.553948 6:+98169588 MsG0680035045.01.T01:CDS
TGTGCAGGAAGGGACAGTGC+AGG 0.554407 6:+98165048 MsG0680035045.01.T01:intron
GCTGCTACTGGTAGAGGCAG+AGG 0.558636 6:+98165165 MsG0680035045.01.T01:CDS
GTTGGAAATACTAGTAGCCA+TGG 0.559627 6:+98169453 MsG0680035045.01.T01:CDS
GGTGGAAGTTGTTGTTGCGG+TGG 0.559820 6:-98169574 MsG0680035046.01.T01:CDS
AATTGCGGCAATTCAAGAGT+TGG 0.561535 6:+98169435 MsG0680035045.01.T01:CDS
GCTGGAAGAGGACGTGGTGG+TGG 0.566601 6:+98165213 MsG0680035045.01.T01:CDS
CTTAGGAATCAGCATCAGCT+AGG 0.569140 6:+98169740 MsG0680035045.01.T01:exon
CTTGTGACTCCGAGATCTAG+AGG 0.577835 6:+98165090 MsG0680035045.01.T01:CDS
AACCGGACCACCTTGAATTG+GGG 0.581438 6:-98164801 None:intergenic
ACAAATTGTGGCACACCCGC+AGG 0.591282 6:+98169600 MsG0680035045.01.T01:CDS
AATCACAACCAATTGACCAC+TGG 0.593578 6:-98169776 None:intergenic
ACGTCCACCAAAGATTCAGC+CGG 0.594972 6:+98164898 MsG0680035045.01.T01:CDS
AAATCTAATAATCACTTAAG+GGG 0.595233 6:-98169991 None:intergenic
TGAAACTGGTTCTGCTGTGG+CGG 0.597469 6:-98169715 MsG0680035046.01.T01:CDS
GCAGTACCAGTACCAGAAGC+CGG 0.599709 6:-98164932 None:intergenic
CAGTGCAGGCTGGAGTGGAA+GGG 0.599894 6:+98165062 MsG0680035045.01.T01:CDS
ACGCCCTAGACTTAATCCGC+TGG 0.609443 6:+98165248 MsG0680035045.01.T01:CDS
AAGTCCAGTCACTGCAATTG+CGG 0.611733 6:+98169420 MsG0680035045.01.T01:CDS
GTTTCAACTACACCGTCTCG+AGG 0.613598 6:+98164827 MsG0680035045.01.T01:CDS
ATCAGCTAGGAGGAATTACA+TGG 0.614473 6:+98169753 MsG0680035045.01.T01:three_prime_UTR
TCTGGTACTGGTACTGCTGG+TGG 0.615652 6:+98164938 MsG0680035045.01.T01:CDS
CCACCTTGAATTGGGGCTGG+AGG 0.618012 6:-98164794 None:intergenic
GAAGCCGGAGTGAAACTCTC+CGG 0.627253 6:-98164917 None:intergenic
TGACTCCGAGATCTAGAGGA+AGG 0.631884 6:+98165094 MsG0680035045.01.T01:CDS
TGTGACAACAATGGATAGTG+TGG 0.633251 6:-98169628 MsG0680035046.01.T01:CDS
TGGTACTCTTGTGACAACAA+TGG 0.633402 6:-98169637 MsG0680035046.01.T01:CDS
GGTGGTGGAAGTTGTTGTTG+CGG 0.635601 6:-98169577 MsG0680035046.01.T01:CDS
TCTAAATCAAAGAAGAGACC+AGG 0.636287 6:+98164875 MsG0680035045.01.T01:CDS
TTTCAACTACACCGTCTCGA+GGG 0.640448 6:+98164828 MsG0680035045.01.T01:CDS
GGTGGTGGCTGGTAGAGCTG+TGG 0.642241 6:-98169694 MsG0680035046.01.T01:CDS
GGACGTCCTCTCCCTCGAGA+CGG 0.643181 6:-98164839 None:intergenic
TCAGCCGGAGAGTTTCACTC+CGG 0.643648 6:+98164913 MsG0680035045.01.T01:CDS
GATTTAGATTTCGAACCAGG+AGG 0.645101 6:-98164860 None:intergenic
GCTGGTGGTGTTGTTTCGGG+TGG 0.647446 6:+98164953 MsG0680035045.01.T01:CDS
AGGAATCAGCATCAGCTAGG+AGG 0.647955 6:+98169743 MsG0680035045.01.T01:exon
GACAGATTTGTAAAGCGAGT+AGG 0.648252 6:+98169888 MsG0680035045.01.T01:three_prime_UTR
GGACGTGGAAGAGGCCGCGG+TGG 0.650646 6:+98165186 MsG0680035045.01.T01:CDS
TTTCCAAAAGATGGAGCCAG+CGG 0.654159 6:-98165264 None:intergenic
GTTAAAATGAGGCCTAAGTG+CGG 0.654225 6:-98169392 None:intergenic
GGATGAAACTGGTTCTGCTG+TGG 0.658414 6:-98169718 MsG0680035046.01.T01:CDS
AGATTTGTAAAGCGAGTAGG+CGG 0.677472 6:+98169891 MsG0680035045.01.T01:three_prime_UTR
TCCACAGCAGCAGAACCTGT+CGG 0.685467 6:+98169507 MsG0680035045.01.T01:CDS
GATAGTGTGGAAATACCTGC+GGG 0.686585 6:-98169615 MsG0680035046.01.T01:CDS
AGGAGGAATTACATGGCCAG+TGG 0.687556 6:+98169760 MsG0680035045.01.T01:three_prime_UTR
GGGTGTGCCACAATTTGTGG+TGG 0.687661 6:-98169595 MsG0680035046.01.T01:CDS
GGATAGTGTGGAAATACCTG+CGG 0.692341 6:-98169616 MsG0680035046.01.T01:CDS
GTTGCTGGAAGAGGACGTGG+TGG 0.704837 6:+98165210 MsG0680035045.01.T01:CDS
TTAACATAAGACACATGATG+AGG 0.708743 6:+98169864 MsG0680035045.01.T01:three_prime_UTR
CCTCCAGCCCCAATTCAAGG+TGG 0.747498 6:+98164794 MsG0680035045.01.T01:CDS
CTCTTCCAGCAACACCACCG+CGG 0.755127 6:-98165200 None:intergenic
TGTGGTTGCTGGTACAACTG+CGG 0.801259 6:-98169676 MsG0680035046.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATCATAAATCATAT+AGG - Chr6:98168822-98168841 None:intergenic 10.0%
!! TAATAATCATAAATCATATA+GGG - Chr6:98168821-98168840 None:intergenic 10.0%
!!! TATTTCTATGATTTTAAAAT+TGG + Chr6:98167335-98167354 MsG0680035045.01.T01:intron 10.0%
!! AAAAATCTAATAATCACTTA+AGG - Chr6:98169996-98170015 None:intergenic 15.0%
!! AAAATCTAATAATCACTTAA+GGG - Chr6:98169995-98170014 None:intergenic 15.0%
!! TCAAAAACAATTATACAATA+GGG - Chr6:98168853-98168872 None:intergenic 15.0%
!! TTATATAAATTAATCATCTG+TGG + Chr6:98166898-98166917 MsG0680035045.01.T01:intron 15.0%
!! TTCAAAAACAATTATACAAT+AGG - Chr6:98168854-98168873 None:intergenic 15.0%
!!! AAAAATAAGTTTTTTTCTTG+GGG + Chr6:98167771-98167790 MsG0680035045.01.T01:intron 15.0%
!!! AATATTGTGTTATCATTTTT+AGG + Chr6:98167634-98167653 MsG0680035045.01.T01:intron 15.0%
!!! ACAAAAATAAGTTTTTTTCT+TGG + Chr6:98167769-98167788 MsG0680035045.01.T01:intron 15.0%
!!! ATAATTTTGTTATAATACTC+TGG + Chr6:98166234-98166253 MsG0680035045.01.T01:intron 15.0%
!!! ATATTGTGTTATCATTTTTA+GGG + Chr6:98167635-98167654 MsG0680035045.01.T01:intron 15.0%
!!! CAAAAATAAGTTTTTTTCTT+GGG + Chr6:98167770-98167789 MsG0680035045.01.T01:intron 15.0%
!! AAAATCTTCAGAAAAGTAAA+AGG - Chr6:98166550-98166569 None:intergenic 20.0%
!! AAACTTGATATAGTATCTTT+AGG - Chr6:98167418-98167437 None:intergenic 20.0%
!! AAATCTAATAATCACTTAAG+GGG - Chr6:98169994-98170013 None:intergenic 20.0%
!! AAATCTTCAGAAAAGTAAAA+GGG - Chr6:98166549-98166568 None:intergenic 20.0%
!! AAATGATGCAAAAAAATATG+TGG - Chr6:98168120-98168139 None:intergenic 20.0%
!! AATGATGCAAAAAAATATGT+GGG - Chr6:98168119-98168138 None:intergenic 20.0%
!! ATAACTTGATATAGTATCTT+AGG - Chr6:98167530-98167549 None:intergenic 20.0%
!! TAATAGTAATAAACTTACAG+TGG - Chr6:98168898-98168917 None:intergenic 20.0%
!! TTTCTGTTTATGTAGTATAT+AGG + Chr6:98166795-98166814 MsG0680035045.01.T01:intron 20.0%
!! TTTGTATAAAATGATCTTTG+TGG + Chr6:98168175-98168194 MsG0680035045.01.T01:intron 20.0%
!!! AAAGTTTTCTATTTTGAGTT+TGG + Chr6:98166464-98166483 MsG0680035045.01.T01:intron 20.0%
!!! AACTTTTTTTGAAGGAAAAA+AGG - Chr6:98166835-98166854 None:intergenic 20.0%
!!! AATAGTTACTTTATCATCTA+TGG - Chr6:98168497-98168516 None:intergenic 20.0%
!!! AGACTTATAATTGAACTTTT+TGG + Chr6:98167937-98167956 MsG0680035045.01.T01:intron 20.0%
!!! ATAGTTACTTTATCATCTAT+GGG - Chr6:98168496-98168515 None:intergenic 20.0%
!!! ATTTTATTGCTCATATTGAT+TGG + Chr6:98169161-98169180 MsG0680035045.01.T01:intron 20.0%
!!! CATGACATTTATTTTCAATT+TGG - Chr6:98168965-98168984 None:intergenic 20.0%
!!! TCTATATCATATTTTTTGTG+CGG + Chr6:98168218-98168237 MsG0680035045.01.T01:intron 20.0%
!!! TGAGCAGTATAATTTTAAAA+AGG - Chr6:98166862-98166881 None:intergenic 20.0%
!!! TGATTTTTTATGAACTGTTT+TGG + Chr6:98166971-98166990 MsG0680035045.01.T01:intron 20.0%
!!! TTGAAGTATAATGAATGTTT+TGG + Chr6:98166268-98166287 MsG0680035045.01.T01:intron 20.0%
!!! TTGATTTTTAGATGAATTAG+TGG + Chr6:98165377-98165396 MsG0680035045.01.T01:intron 20.0%
!!! TTGTTTTCAAGTTTAATGAA+TGG + Chr6:98166402-98166421 MsG0680035045.01.T01:intron 20.0%
!!! TTTAAATTTGTTTTTTTCCC+TGG + Chr6:98168241-98168260 MsG0680035045.01.T01:intron 20.0%
!!! TTTTATGTCTGATTGTTTTA+AGG + Chr6:98167436-98167455 MsG0680035045.01.T01:intron 20.0%
!!! TTTTGATTATGCAAGATTTA+CGG + Chr6:98165400-98165419 MsG0680035045.01.T01:intron 20.0%
!!! TTTTTAATTTGAAGGTGAAT+AGG + Chr6:98167797-98167816 MsG0680035045.01.T01:intron 20.0%
! AAACTAAAAGTTTACTTTGC+AGG + Chr6:98167191-98167210 MsG0680035045.01.T01:intron 25.0%
! AACTCTATGCAAATATATAG+GGG + Chr6:98168414-98168433 MsG0680035045.01.T01:intron 25.0%
! AAGCTGAAATAAATAGTCTT+TGG + Chr6:98169268-98169287 MsG0680035045.01.T01:intron 25.0%
! AATAACATCCAAATACATCT+TGG - Chr6:98166707-98166726 None:intergenic 25.0%
! AATAACTTCACTAAATATCC+AGG - Chr6:98168262-98168281 None:intergenic 25.0%
! ACATCTTGGAATTCAATATA+TGG - Chr6:98166693-98166712 None:intergenic 25.0%
! AGAACAGTTTATAAATGCTA+AGG - Chr6:98169132-98169151 None:intergenic 25.0%
! ATAAATCATATAGGGAAAAC+AGG - Chr6:98168813-98168832 None:intergenic 25.0%
! ATAACTTCACTAAATATCCA+GGG - Chr6:98168261-98168280 None:intergenic 25.0%
! ATTCATTATACTTCAAAACC+GGG - Chr6:98166264-98166283 None:intergenic 25.0%
! ATTCCGACAATATAATTCAA+AGG - Chr6:98168735-98168754 None:intergenic 25.0%
! ATTGAATTCCAAGATGTATT+TGG + Chr6:98166696-98166715 MsG0680035045.01.T01:intron 25.0%
! CATTCATTATACTTCAAAAC+CGG - Chr6:98166265-98166284 None:intergenic 25.0%
! CTTAAAAATTCTACCTTCTT+AGG - Chr6:98165305-98165324 None:intergenic 25.0%
! GAACTCTATGCAAATATATA+GGG + Chr6:98168413-98168432 MsG0680035045.01.T01:intron 25.0%
! GGATTATACAAAATACTAAC+AGG + Chr6:98167467-98167486 MsG0680035045.01.T01:intron 25.0%
! GTAGATTCGCTATATTAATT+TGG + Chr6:98168445-98168464 MsG0680035045.01.T01:intron 25.0%
! TAAATCATATAGGGAAAACA+GGG - Chr6:98168812-98168831 None:intergenic 25.0%
! TAGAAAGCAAAACAAATAAG+AGG - Chr6:98168068-98168087 None:intergenic 25.0%
! TCAAGTTTAATGAATGGTTT+CGG + Chr6:98166408-98166427 MsG0680035045.01.T01:intron 25.0%
! TTAATTGAGTTATTTGCAGT+TGG + Chr6:98167013-98167032 MsG0680035045.01.T01:intron 25.0%
! TTGCCTTTGAATTATATTGT+CGG + Chr6:98168729-98168748 MsG0680035045.01.T01:intron 25.0%
!! AACTTGTATGCATTTTATAC+AGG - Chr6:98167363-98167382 None:intergenic 25.0%
!! TATAATTGAACTTTTTGGAC+TGG + Chr6:98167942-98167961 MsG0680035045.01.T01:intron 25.0%
!! TATTATGTGTGACTGTTTTA+AGG + Chr6:98167547-98167566 MsG0680035045.01.T01:intron 25.0%
!! TCTGAAGATTTTTCCTTTTT+GGG + Chr6:98166558-98166577 MsG0680035045.01.T01:intron 25.0%
!! TGAATTTTGCAATCTGAAAA+TGG + Chr6:98167243-98167262 MsG0680035045.01.T01:intron 25.0%
!!! AAAAAAACAGTCGATTTTTC+TGG + Chr6:98167278-98167297 MsG0680035045.01.T01:intron 25.0%
!!! AAGGAGTTAACTTTTTTTGA+AGG - Chr6:98166843-98166862 None:intergenic 25.0%
!!! AGTCTATCATATCATTTTTG+TGG + Chr6:98168363-98168382 MsG0680035045.01.T01:intron 25.0%
!!! GATTGTTTTAAGGTGAATAT+TGG + Chr6:98167446-98167465 MsG0680035045.01.T01:intron 25.0%
!!! GTCTATCATATCATTTTTGT+GGG + Chr6:98168364-98168383 MsG0680035045.01.T01:intron 25.0%
!!! TGGGGTAATTTTTAATTTGA+AGG + Chr6:98167789-98167808 MsG0680035045.01.T01:intron 25.0%
!!! TTCTGAAGATTTTTCCTTTT+TGG + Chr6:98166557-98166576 MsG0680035045.01.T01:intron 25.0%
!!! TTGATTTGTTGTTGAATTAG+AGG + Chr6:98165487-98165506 MsG0680035045.01.T01:intron 25.0%
!!! TTGATTTGTTGTTGAATTAG+TGG + Chr6:98165487-98165506 MsG0680035045.01.T01:intron 25.0%
!!! TTTTTTATGAACTGTTTTGG+TGG + Chr6:98166974-98166993 MsG0680035045.01.T01:intron 25.0%
AAGTGAATTTGTCAATCAGA+CGG - Chr6:98167056-98167075 None:intergenic 30.0%
AGATTAACTGGAACTGAATA+TGG + Chr6:98166583-98166602 MsG0680035045.01.T01:intron 30.0%
CAATCAATCCAGCAAAATTT+AGG - Chr6:98166495-98166514 None:intergenic 30.0%
GGAACTCTATGCAAATATAT+AGG + Chr6:98168412-98168431 MsG0680035045.01.T01:intron 30.0%
TTAACATAAGACACATGATG+AGG + Chr6:98169864-98169883 MsG0680035045.01.T01:three_prime_UTR 30.0%
TTAAGGGGTCAATCTAAAAA+CGG - Chr6:98169979-98169998 None:intergenic 30.0%
! CTGAAGATTTTTCCTTTTTG+GGG + Chr6:98166559-98166578 MsG0680035045.01.T01:intron 30.0%
! TAAAACTGAGTTTGAAGTGA+AGG + Chr6:98169054-98169073 MsG0680035045.01.T01:intron 30.0%
! TATTGTGCTGTGTTGTTAAA+TGG + Chr6:98168513-98168532 MsG0680035045.01.T01:intron 30.0%
! TCATCTTTAGCATCATTTTC+TGG - Chr6:98169218-98169237 None:intergenic 30.0%
! TTTGATTTAGATTTCGAACC+AGG - Chr6:98164866-98164885 None:intergenic 30.0%
!! GGTAATGTCATGTTTTTGTT+AGG + Chr6:98166604-98166623 MsG0680035045.01.T01:intron 30.0%
!! TGTACATTTTATTTGCAGCA+AGG + Chr6:98169349-98169368 MsG0680035045.01.T01:intron 30.0%
!! TTTTAAGCTTTTGACTGTTC+TGG + Chr6:98165318-98165337 MsG0680035045.01.T01:intron 30.0%
!!! ATTAGAGGTTTTAGATTTGC+AGG + Chr6:98165626-98165645 MsG0680035045.01.T01:intron 30.0%
!!! ATTAGTGGTTTTAGATATGC+AGG + Chr6:98165502-98165521 MsG0680035045.01.T01:intron 30.0%
!!! TTAGCTGTTGTAGTTTTTTC+AGG + Chr6:98167593-98167612 MsG0680035045.01.T01:intron 30.0%
!!! TTATAATACTCTGGTTTTCC+CGG + Chr6:98166243-98166262 MsG0680035045.01.T01:intron 30.0%
AAAAGTTTACTTTGCAGGAC+TGG + Chr6:98167196-98167215 MsG0680035045.01.T01:intron 35.0%
AAGTCTGCATATTTCACTCA+TGG - Chr6:98167923-98167942 None:intergenic 35.0%
ACAGCATTCACATTCTTTCT+TGG - Chr6:98165120-98165139 None:intergenic 35.0%
AGAGCAATTCAAACAACTTG+AGG - Chr6:98168030-98168049 None:intergenic 35.0%
CAAGTTGTTTGAATTGCTCT+TGG + Chr6:98168030-98168049 MsG0680035045.01.T01:intron 35.0%
GGACTTTCATGGTTAAAATG+AGG - Chr6:98169406-98169425 None:intergenic 35.0%
TAGTACACAATCCGTATACA+AGG + Chr6:98168391-98168410 MsG0680035045.01.T01:intron 35.0%
TCACAGTATCTCTGCTAAAA+AGG - Chr6:98168932-98168951 None:intergenic 35.0%
TCGTACAATGTTGTGTATCA+CGG - Chr6:98168616-98168635 None:intergenic 35.0%
TCTAAATCAAAGAAGAGACC+AGG + Chr6:98164875-98164894 MsG0680035045.01.T01:CDS 35.0%
TGCAAGTCAAGAAAAACGTA+TGG - Chr6:98165729-98165748 None:intergenic 35.0%
TGCATAGAGTTCCTTGTATA+CGG - Chr6:98168405-98168424 None:intergenic 35.0%
TTTCCATTCATATGGTCCAT+TGG - Chr6:98167714-98167733 None:intergenic 35.0%
TTTGCAGCAAGGAAAAGTTA+AGG + Chr6:98169360-98169379 MsG0680035045.01.T01:intron 35.0%
! AAAGTAAAAGGGTACAGACA+TGG - Chr6:98166538-98166557 None:intergenic 35.0%
! TGCACTGTTTTCCATTCATA+TGG - Chr6:98167722-98167741 None:intergenic 35.0%
! TGGATTGTCCTAAATTTTGC+TGG + Chr6:98166484-98166503 MsG0680035045.01.T01:intron 35.0%
! TGGTTGTGATTTGTGAATCT+AGG + Chr6:98169788-98169807 MsG0680035045.01.T01:three_prime_UTR 35.0%
!! TTGACTTGCAGTTGAATTAG+CGG + Chr6:98165739-98165758 MsG0680035045.01.T01:intron 35.0%
AAAAGCGATGTTGTCAATCG+CGG - Chr6:98168711-98168730 None:intergenic 40.0%
AATCACAACCAATTGACCAC+TGG - Chr6:98169779-98169798 None:intergenic 40.0%
AATTGCGGCAATTCAAGAGT+TGG + Chr6:98169435-98169454 MsG0680035045.01.T01:CDS 40.0%
AGATTTGTAAAGCGAGTAGG+CGG + Chr6:98169891-98169910 MsG0680035045.01.T01:three_prime_UTR 40.0%
AGCAGAGATACTGTGAATTC+TGG + Chr6:98168936-98168955 MsG0680035045.01.T01:intron 40.0%
ATATGGTCCATTGGCAATGT+AGG - Chr6:98167705-98167724 None:intergenic 40.0%
ATCAGCTAGGAGGAATTACA+TGG + Chr6:98169753-98169772 MsG0680035045.01.T01:three_prime_UTR 40.0%
ATGTTGTCAATCGCGGATAA+TGG - Chr6:98168704-98168723 None:intergenic 40.0%
ATTTCTCCCTACATTGCCAA+TGG + Chr6:98167695-98167714 MsG0680035045.01.T01:intron 40.0%
CAGGGAAAATGAGTGTAACA+AGG - Chr6:98168794-98168813 None:intergenic 40.0%
CCAGTTAATCTACCCCAAAA+AGG - Chr6:98166574-98166593 None:intergenic 40.0%
CTGATTCCTAAGGATGAAAC+TGG - Chr6:98169732-98169751 MsG0680035046.01.T01:CDS 40.0%
CTGCTCAATTTCATCATCTG+TGG + Chr6:98166875-98166894 MsG0680035045.01.T01:intron 40.0%
GAAAATGAGTGTAACAAGGC+AGG - Chr6:98168790-98168809 None:intergenic 40.0%
GACAGATTTGTAAAGCGAGT+AGG + Chr6:98169888-98169907 MsG0680035045.01.T01:three_prime_UTR 40.0%
GATTTAGATTTCGAACCAGG+AGG - Chr6:98164863-98164882 None:intergenic 40.0%
GCAGAGATACTGTGAATTCT+GGG + Chr6:98168937-98168956 MsG0680035045.01.T01:intron 40.0%
GCTGGATTGATTGCATTAGT+AGG + Chr6:98166502-98166521 MsG0680035045.01.T01:intron 40.0%
GGATCTTAATGAACCGCTAA+AGG + Chr6:98169474-98169493 MsG0680035045.01.T01:CDS 40.0%
GGTGTAGTTGAAACTGAAAC+CGG - Chr6:98164821-98164840 None:intergenic 40.0%
GTTAAAATGAGGCCTAAGTG+CGG - Chr6:98169395-98169414 None:intergenic 40.0%
GTTGGAAATACTAGTAGCCA+TGG + Chr6:98169453-98169472 MsG0680035045.01.T01:CDS 40.0%
TAGCGGTTCATTAAGATCCA+TGG - Chr6:98169473-98169492 None:intergenic 40.0%
TATGGTCCATTGGCAATGTA+GGG - Chr6:98167704-98167723 None:intergenic 40.0%
TGCAAGTCAAGAAAAACGCA+TGG - Chr6:98165858-98165877 None:intergenic 40.0%
TGGTACTCTTGTGACAACAA+TGG - Chr6:98169640-98169659 MsG0680035046.01.T01:CDS 40.0%
TGTGACAACAATGGATAGTG+TGG - Chr6:98169631-98169650 MsG0680035046.01.T01:CDS 40.0%
TTGCCAATGGACCATATGAA+TGG + Chr6:98167708-98167727 MsG0680035045.01.T01:intron 40.0%
! TGTGCTGTGTTGTTAAATGG+TGG + Chr6:98168516-98168535 MsG0680035045.01.T01:intron 40.0%
!! ATCTTTTGGAAAAGGCCTGT+GGG + Chr6:98165275-98165294 MsG0680035045.01.T01:CDS 40.0%
!! GGAAGTGTTTCATCCTTTAG+CGG - Chr6:98169490-98169509 MsG0680035046.01.T01:CDS 40.0%
!! GGATTCTGCTGTTGATTCTT+CGG - Chr6:98165004-98165023 None:intergenic 40.0%
!!! CCTTTTTGGGGTAGATTAAC+TGG + Chr6:98166571-98166590 MsG0680035045.01.T01:intron 40.0%
AAACCGGACCACCTTGAATT+GGG - Chr6:98164805-98164824 None:intergenic 45.0%
AAACTCTCCGGCTGAATCTT+TGG - Chr6:98164908-98164927 None:intergenic 45.0%
AAGTCCAGTCACTGCAATTG+CGG + Chr6:98169420-98169439 MsG0680035045.01.T01:CDS 45.0%
ACTTCCACCACCACAAATTG+TGG + Chr6:98169588-98169607 MsG0680035045.01.T01:CDS 45.0%
AGGAATCTCTTTCCGCACTT+AGG + Chr6:98169380-98169399 MsG0680035045.01.T01:CDS 45.0%
AGTTTACTTTGCAGGACTGG+TGG + Chr6:98167199-98167218 MsG0680035045.01.T01:intron 45.0%
CTTAGGAATCAGCATCAGCT+AGG + Chr6:98169740-98169759 MsG0680035045.01.T01:exon 45.0%
GATAGTGTGGAAATACCTGC+GGG - Chr6:98169618-98169637 MsG0680035046.01.T01:CDS 45.0%
GCAGAACCAGTTTCATCCTT+AGG + Chr6:98169723-98169742 MsG0680035045.01.T01:CDS 45.0%
GCAGCAAATGGTATCACAGT+TGG - Chr6:98165025-98165044 None:intergenic 45.0%
GGATAGTGTGGAAATACCTG+CGG - Chr6:98169619-98169638 MsG0680035046.01.T01:CDS 45.0%
TTACATGGCCAGTGGTCAAT+TGG + Chr6:98169768-98169787 MsG0680035045.01.T01:three_prime_UTR 45.0%
TTGCAGTGACTGGACTTTCA+TGG - Chr6:98169417-98169436 None:intergenic 45.0%
TTTCAACTACACCGTCTCGA+GGG + Chr6:98164828-98164847 MsG0680035045.01.T01:CDS 45.0%
TTTCCAAAAGATGGAGCCAG+CGG - Chr6:98165267-98165286 None:intergenic 45.0%
! CACAGGCCTTTTCCAAAAGA+TGG - Chr6:98165276-98165295 None:intergenic 45.0%
! GTTTACTTTGCAGGACTGGT+GGG + Chr6:98167200-98167219 MsG0680035045.01.T01:intron 45.0%
!! CATCTTTTGGAAAAGGCCTG+TGG + Chr6:98165274-98165293 MsG0680035045.01.T01:CDS 45.0%
!! CTAGCTGATGCTGATTCCTA+AGG - Chr6:98169742-98169761 None:intergenic 45.0%
!! CTGGCTCCATCTTTTGGAAA+AGG + Chr6:98165267-98165286 MsG0680035045.01.T01:CDS 45.0%
!! TACTGCTGGTGGTGTTGTTT+CGG + Chr6:98164949-98164968 MsG0680035045.01.T01:CDS 45.0%
!! TTCTGCTGTTGATTCTTCGG+TGG - Chr6:98165001-98165020 None:intergenic 45.0%
AACCGGACCACCTTGAATTG+GGG - Chr6:98164804-98164823 None:intergenic 50.0%
ACGTCCACCAAAGATTCAGC+CGG + Chr6:98164898-98164917 MsG0680035045.01.T01:CDS 50.0%
AGGAATCAGCATCAGCTAGG+AGG + Chr6:98169743-98169762 MsG0680035045.01.T01:exon 50.0%
AGGAGGAATTACATGGCCAG+TGG + Chr6:98169760-98169779 MsG0680035045.01.T01:three_prime_UTR 50.0%
ATTGCCGCAATTGCAGTGAC+TGG - Chr6:98169427-98169446 None:intergenic 50.0%
CTTGTGACTCCGAGATCTAG+AGG + Chr6:98165090-98165109 MsG0680035045.01.T01:CDS 50.0%
GAAACCGGACCACCTTGAAT+TGG - Chr6:98164806-98164825 None:intergenic 50.0%
GCTATAGCAGTGTTGCGTAG+CGG + Chr6:98168656-98168675 MsG0680035045.01.T01:intron 50.0%
GTGGTTCGAAGAGAAGACCA+GGG + Chr6:98164972-98164991 MsG0680035045.01.T01:intron 50.0%
GTTTCAACTACACCGTCTCG+AGG + Chr6:98164827-98164846 MsG0680035045.01.T01:CDS 50.0%
TGACTCCGAGATCTAGAGGA+AGG + Chr6:98165094-98165113 MsG0680035045.01.T01:CDS 50.0%
TGTGCCACAATTTGTGGTGG+TGG - Chr6:98169595-98169614 MsG0680035046.01.T01:CDS 50.0%
TGTGGTTGCTGGTACAACTG+CGG - Chr6:98169679-98169698 MsG0680035046.01.T01:CDS 50.0%
! CTTGGCCTTCCTCTAGATCT+CGG - Chr6:98165102-98165121 None:intergenic 50.0%
! TGAATCTTTGGTGGACGTCC+TGG - Chr6:98164896-98164915 None:intergenic 50.0%
!! ACTGCTGGTGGTGTTGTTTC+GGG + Chr6:98164950-98164969 MsG0680035045.01.T01:CDS 50.0%
!! GAGCCAGCGGATTAAGTCTA+GGG - Chr6:98165254-98165273 None:intergenic 50.0%
!! GGATGAAACTGGTTCTGCTG+TGG - Chr6:98169721-98169740 MsG0680035046.01.T01:CDS 50.0%
!! GGTGGTGGAAGTTGTTGTTG+CGG - Chr6:98169580-98169599 MsG0680035046.01.T01:CDS 50.0%
!! TGAAACTGGTTCTGCTGTGG+CGG - Chr6:98169718-98169737 MsG0680035046.01.T01:CDS 50.0%
!!! AATCCGCTGGCTCCATCTTT+TGG + Chr6:98165261-98165280 MsG0680035045.01.T01:CDS 50.0%
ACAAATTGTGGCACACCCGC+AGG + Chr6:98169600-98169619 MsG0680035045.01.T01:CDS 55.0%
ACCTTCTTAGGTCGACCCAC+AGG - Chr6:98165293-98165312 None:intergenic 55.0%
ACGCCCTAGACTTAATCCGC+TGG + Chr6:98165248-98165267 MsG0680035045.01.T01:CDS 55.0%
AGCCCCAATTCAAGGTGGTC+CGG + Chr6:98164799-98164818 MsG0680035045.01.T01:CDS 55.0%
AGTCCTCCAGCCCCAATTCA+AGG + Chr6:98164791-98164810 MsG0680035045.01.T01:CDS 55.0%
CTCTCCGGCTGAATCTTTGG+TGG - Chr6:98164905-98164924 None:intergenic 55.0%
GAAGCCGGAGTGAAACTCTC+CGG - Chr6:98164920-98164939 None:intergenic 55.0%
GAATGCTGTTGCTGCTGTGC+CGG + Chr6:98165131-98165150 MsG0680035045.01.T01:CDS 55.0%
GAGAGTTTCACTCCGGCTTC+TGG + Chr6:98164920-98164939 MsG0680035045.01.T01:CDS 55.0%
GCAGTACCAGTACCAGAAGC+CGG - Chr6:98164935-98164954 None:intergenic 55.0%
GGGTGTGCCACAATTTGTGG+TGG - Chr6:98169598-98169617 MsG0680035046.01.T01:CDS 55.0%
GGTGGTTCGAAGAGAAGACC+AGG + Chr6:98164971-98164990 MsG0680035045.01.T01:intron 55.0%
TCAGCCGGAGAGTTTCACTC+CGG + Chr6:98164913-98164932 MsG0680035045.01.T01:CDS 55.0%
TCCACAGCAGCAGAACCTGT+CGG + Chr6:98169507-98169526 MsG0680035045.01.T01:CDS 55.0%
TCCTGCACAGGTGCAGCAAA+TGG - Chr6:98165037-98165056 None:intergenic 55.0%
TGCGGGTGTGCCACAATTTG+TGG - Chr6:98169601-98169620 MsG0680035046.01.T01:CDS 55.0%
TTCACTCCGGCTTCTGGTAC+TGG + Chr6:98164926-98164945 MsG0680035045.01.T01:CDS 55.0%
TTGCTGCACCTGTGCAGGAA+GGG + Chr6:98165038-98165057 MsG0680035045.01.T01:intron 55.0%
TTTGCTGCACCTGTGCAGGA+AGG + Chr6:98165037-98165056 MsG0680035045.01.T01:intron 55.0%
! ACCATTTGCTGCACCTGTGC+AGG + Chr6:98165033-98165052 MsG0680035045.01.T01:intron 55.0%
! GGAAGTTGTTGTTGCGGTGG+TGG - Chr6:98169574-98169593 MsG0680035046.01.T01:CDS 55.0%
! GGTGGAAGTTGTTGTTGCGG+TGG - Chr6:98169577-98169596 MsG0680035046.01.T01:CDS 55.0%
! TCTGGAGCACTAGCAGTAGC+AGG - Chr6:98169200-98169219 None:intergenic 55.0%
! TGTTGTTGCGGTGGTGGTTG+TGG - Chr6:98169568-98169587 MsG0680035046.01.T01:CDS 55.0%
!! GCTTCTGGTACTGGTACTGC+TGG + Chr6:98164935-98164954 MsG0680035045.01.T01:CDS 55.0%
!! GGAGCCAGCGGATTAAGTCT+AGG - Chr6:98165255-98165274 None:intergenic 55.0%
!! TCTGGTACTGGTACTGCTGG+TGG + Chr6:98164938-98164957 MsG0680035045.01.T01:CDS 55.0%
ACAACTGCGGCTGCTGTTGC+TGG - Chr6:98169666-98169685 MsG0680035046.01.T01:CDS 60.0%
ACAGTGCAGGCTGGAGTGGA+AGG + Chr6:98165061-98165080 MsG0680035045.01.T01:CDS 60.0%
ACTACACCGTCTCGAGGGAG+AGG + Chr6:98164833-98164852 MsG0680035045.01.T01:CDS 60.0%
ACTGGTAGAGGCAGAGGACG+TGG + Chr6:98165171-98165190 MsG0680035045.01.T01:CDS 60.0%
AGAGGCAGAGGACGTGGAAG+AGG + Chr6:98165177-98165196 MsG0680035045.01.T01:CDS 60.0%
CAGTGCAGGCTGGAGTGGAA+GGG + Chr6:98165062-98165081 MsG0680035045.01.T01:CDS 60.0%
CCACCTTGAATTGGGGCTGG+AGG - Chr6:98164797-98164816 None:intergenic 60.0%
CCTCCAGCCCCAATTCAAGG+TGG + Chr6:98164794-98164813 MsG0680035045.01.T01:CDS 60.0%
CTCTTCCAGCAACACCACCG+CGG - Chr6:98165203-98165222 None:intergenic 60.0%
GCCTGTGGGTCGACCTAAGA+AGG + Chr6:98165289-98165308 MsG0680035045.01.T01:intron 60.0%
GCGGCTGCTGTTGCTGGTAA+TGG - Chr6:98169660-98169679 MsG0680035046.01.T01:CDS 60.0%
GCGGTTGCTGCTACTGGTAG+AGG + Chr6:98165159-98165178 MsG0680035045.01.T01:CDS 60.0%
GCTGCTACTGGTAGAGGCAG+AGG + Chr6:98165165-98165184 MsG0680035045.01.T01:CDS 60.0%
GCTGGTAGAGCTGTGGTTGC+TGG - Chr6:98169690-98169709 MsG0680035046.01.T01:CDS 60.0%
GGACCACCTTGAATTGGGGC+TGG - Chr6:98164800-98164819 None:intergenic 60.0%
GTAGCAGCAACCGCAGCAAC+CGG - Chr6:98165153-98165172 None:intergenic 60.0%
GTTGCTGCGGTTGCTGCTAC+TGG + Chr6:98165153-98165172 MsG0680035045.01.T01:CDS 60.0%
GTTGCTGGAAGAGGACGTGG+TGG + Chr6:98165210-98165229 MsG0680035045.01.T01:CDS 60.0%
TGATTCTTCGGTGGACGCCC+TGG - Chr6:98164992-98165011 None:intergenic 60.0%
TGCACTGTCCCTTCCTGCAC+AGG - Chr6:98165049-98165068 None:intergenic 60.0%
TGTGCAGGAAGGGACAGTGC+AGG + Chr6:98165048-98165067 MsG0680035045.01.T01:intron 60.0%
! GTGGCTGATCTTGTGCCGAC+AGG - Chr6:98169525-98169544 MsG0680035046.01.T01:CDS 60.0%
!! AACTGGTTCTGCTGTGGCGG+TGG - Chr6:98169715-98169734 MsG0680035046.01.T01:CDS 60.0%
!! GCTGGTGGTGTTGTTTCGGG+TGG + Chr6:98164953-98164972 MsG0680035045.01.T01:CDS 60.0%
!! GGTGTTGCTGGAAGAGGACG+TGG + Chr6:98165207-98165226 MsG0680035045.01.T01:CDS 60.0%
AGAGGACGTGGAAGAGGCCG+CGG + Chr6:98165183-98165202 MsG0680035045.01.T01:CDS 65.0%
AGCTGCTGCTGCTGCTGCTG+TGG - Chr6:98169544-98169563 MsG0680035046.01.T01:CDS 65.0%
AGGGACAGTGCAGGCTGGAG+TGG + Chr6:98165057-98165076 MsG0680035045.01.T01:CDS 65.0%
CAGGAAGGGACAGTGCAGGC+TGG + Chr6:98165052-98165071 MsG0680035045.01.T01:intron 65.0%
GCCGACAGGTTCTGCTGCTG+TGG - Chr6:98169511-98169530 MsG0680035046.01.T01:CDS 65.0%
GCTGGAAGAGGACGTGGTGG+TGG + Chr6:98165213-98165232 MsG0680035045.01.T01:CDS 65.0%
GGACGTCCTCTCCCTCGAGA+CGG - Chr6:98164842-98164861 None:intergenic 65.0%
! GGTGGTGGCTGGTAGAGCTG+TGG - Chr6:98169697-98169716 MsG0680035046.01.T01:CDS 65.0%
! TGGTTCTGCTGTGGCGGTGG+TGG - Chr6:98169712-98169731 MsG0680035046.01.T01:CDS 65.0%
!! AGAGGACGTGGTGGTGGTCG+TGG + Chr6:98165219-98165238 MsG0680035045.01.T01:CDS 65.0%
!! CGCGGTGGTGTTGCTGGAAG+AGG + Chr6:98165201-98165220 MsG0680035045.01.T01:CDS 65.0%
!! CGTGGTGGTGGTCGTGGAAG+AGG + Chr6:98165225-98165244 MsG0680035045.01.T01:CDS 65.0%
!! TGCTGCTGTGCCGGTTGCTG+CGG + Chr6:98165140-98165159 MsG0680035045.01.T01:CDS 65.0%
CGAGGGAGAGGACGTCCTCC+TGG + Chr6:98164845-98164864 MsG0680035045.01.T01:CDS 70.0%
! TCTGCTGTGGCGGTGGTGGC+TGG - Chr6:98169708-98169727 MsG0680035046.01.T01:CDS 70.0%
!! AGAGGCCGCGGTGGTGTTGC+TGG + Chr6:98165195-98165214 MsG0680035045.01.T01:CDS 70.0%
GGACGTGGAAGAGGCCGCGG+TGG + Chr6:98165186-98165205 MsG0680035045.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 98164788 98170092 98164788 ID=MsG0680035045.01;Name=MsG0680035045.01
Chr6 mRNA 98164788 98170092 98164788 ID=MsG0680035045.01.T01;Parent=MsG0680035045.01;Name=MsG0680035045.01.T01;_AED=0.41;_eAED=0.53;_QI=0|0.33|0.5|1|0.33|0.25|4|348|294
Chr6 exon 98164788 98164974 98164788 ID=MsG0680035045.01.T01:exon:7453;Parent=MsG0680035045.01.T01
Chr6 exon 98165055 98165296 98165055 ID=MsG0680035045.01.T01:exon:7454;Parent=MsG0680035045.01.T01
Chr6 exon 98169188 98169265 98169188 ID=MsG0680035045.01.T01:exon:7455;Parent=MsG0680035045.01.T01
Chr6 exon 98169367 98170092 98169367 ID=MsG0680035045.01.T01:exon:7456;Parent=MsG0680035045.01.T01
Chr6 CDS 98164788 98164974 98164788 ID=MsG0680035045.01.T01:cds;Parent=MsG0680035045.01.T01
Chr6 CDS 98165055 98165296 98165055 ID=MsG0680035045.01.T01:cds;Parent=MsG0680035045.01.T01
Chr6 CDS 98169188 98169265 98169188 ID=MsG0680035045.01.T01:cds;Parent=MsG0680035045.01.T01
Chr6 CDS 98169367 98169744 98169367 ID=MsG0680035045.01.T01:cds;Parent=MsG0680035045.01.T01
Chr6 three_prime_UTR 98169745 98170092 98169745 ID=MsG0680035045.01.T01:three_prime_utr;Parent=MsG0680035045.01.T01
Gene Sequence

>MsG0680035045.01.T01

TTGAGTCCTCCAGCCCCAATTCAAGGTGGTCCGGTTTCAGTTTCAACTACACCGTCTCGAGGGAGAGGACGTCCTCCTGGTTCGAAATCTAAATCAAAGAAGAGACCAGGACGTCCACCAAAGATTCAGCCGGAGAGTTTCACTCCGGCTTCTGGTACTGGTACTGCTGGTGGTGTTGTTTCGGGTGGAAGGGACAGTGCAGGCTGGAGTGGAAGGGTTTCTCTTGTGACTCCGAGATCTAGAGGAAGGCCAAGAAAGAATGTGAATGCTGTTGCTGCTGTGCCGGTTGCTGCGGTTGCTGCTACTGGTAGAGGCAGAGGACGTGGAAGAGGCCGCGGTGGTGTTGCTGGAAGAGGACGTGGTGGTGGTCGTGGAAGAGGACGCCCTAGACTTAATCCGCTGGCTCCATCTTTTGGAAAAGGCCTGTGGAGAACAACACCTGCTACTGCTAGTGCTCCAGAAAATGATGCTAAAGATGACGATCTCAAGAAGAAACTTGAACACTTTCAAGGAAAAGTTAAGGAATCTCTTTCCGCACTTAGGCCTCATTTTAACCATGAAAGTCCAGTCACTGCAATTGCGGCAATTCAAGAGTTGGAAATACTAGTAGCCATGGATCTTAATGAACCGCTAAAGGATGAAACACTTCCACAGCAGCAGAACCTGTCGGCACAAGATCAGCCACAGCAGCAGCAGCAGCAGCTGCCACAACCACCACCGCAACAACAACTTCCACCACCACAAATTGTGGCACACCCGCAGGTATTTCCACACTATCCATTGTTGTCACAAGAGTACCATTACCAGCAACAGCAGCCGCAGTTGTACCAGCAACCACAGCTCTACCAGCCACCACCGCCACAGCAGAACCAGTTTCATCCTTAG
Protein sequence

>MsG0680035045.01.T01

LSPPAPIQGGPVSVSTTPSRGRGRPPGSKSKSKKRPGRPPKIQPESFTPASGTGTAGGVVSGGRDSAGWSGRVSLVTPRSRGRPRKNVNAVAAVPVAAVAATGRGRGRGRGRGGVAGRGRGGGRGRGRPRLNPLAPSFGKGLWRTTPATASAPENDAKDDDLKKKLEHFQGKVKESLSALRPHFNHESPVTAIAAIQELEILVAMDLNEPLKDETLPQQQNLSAQDQPQQQQQQLPQPPPQQQLPPPQIVAHPQVFPHYPLLSQEYHYQQQQPQLYQQPQLYQPPPPQQNQFHP*