AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042309.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042309.01.T01 MTR_8g012995 98.413 189 3 0 1 189 1 189 7.37e-136 380
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042309.01.T01 AT3G07170 52.632 209 84 7 1 201 1 202 8.80e-61 190
MsG0880042309.01.T01 AT3G07170 51.479 169 71 4 38 201 22 184 2.39e-48 157
MsG0880042309.01.T01 AT5G48680 43.810 210 99 9 1 199 1 202 5.34e-38 132

Find 78 sgRNAs with CRISPR-Local

Find 442 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCAATTCTGATTCGAATT+AGG 0.137975 8:+6948744 MsG0880042309.01.T01:five_prime_UTR
TTCGAAGAATCACAGAAAAT+TGG 0.153926 8:+6948660 MsG0880042309.01.T01:five_prime_UTR
TATTTGTACTTGGTAATTAA+TGG 0.181020 8:+6954358 MsG0880042309.01.T01:three_prime_UTR
GGTTAGATTTGTAGTTTATT+TGG 0.187861 8:+6954308 MsG0880042309.01.T01:three_prime_UTR
TTTCTGTGATTCTTCGAAAA+AGG 0.200573 8:-6948655 None:intergenic
GCTAAAAGTATCTTCTTTCT+TGG 0.200918 8:-6954108 None:intergenic
ATCAATTCTGATTCGAATTA+GGG 0.208792 8:+6948745 MsG0880042309.01.T01:five_prime_UTR
CGAATTAGGGTTCATAGATT+TGG 0.212479 8:+6948758 MsG0880042309.01.T01:five_prime_UTR
CTCTTTCCACTTCGAGTTGC+AGG 0.225136 8:-6952359 None:intergenic
CACAGAAAATTGGGGTTGTT+AGG 0.260099 8:+6948670 MsG0880042309.01.T01:five_prime_UTR
GAATTAGGGTTCATAGATTT+GGG 0.268227 8:+6948759 MsG0880042309.01.T01:five_prime_UTR
TCGAAGAATCACAGAAAATT+GGG 0.315407 8:+6948661 MsG0880042309.01.T01:five_prime_UTR
GATCTTCGTGAAAGACTATC+AGG 0.327976 8:+6952401 MsG0880042309.01.T01:CDS
CGGAATCAACGTCAAGTTAC+TGG 0.333821 8:+6948909 MsG0880042309.01.T01:CDS
CTAGATTTCTTATTTGTACT+TGG 0.346757 8:+6954348 MsG0880042309.01.T01:three_prime_UTR
TGTGAAGATCGCAAAGTTAC+TGG 0.361259 8:+6952296 MsG0880042309.01.T01:intron
AGCTAACCCAGCTCCCAAAA+AGG 0.370154 8:+6952529 MsG0880042309.01.T01:CDS
GAGAGAAGGGATGGAAGGTT+AGG 0.390279 8:-6948508 None:intergenic
ATCAATCCATACTAGTGGTC+CGG 0.405871 8:-6952187 None:intergenic
TCCTGCTGCTTGTAGACAAT+GGG 0.406664 8:+6954186 MsG0880042309.01.T01:CDS
AAGGGAAAGTGCACACGATA+AGG 0.408800 8:-6948712 None:intergenic
GATGAGGACCTCAAGGTTAT+CGG 0.415959 8:+6953458 MsG0880042309.01.T01:CDS
CCGTACTCGTATTACGTATC+CGG 0.426972 8:+6948480 None:intergenic
ACAGAAAATTGGGGTTGTTA+GGG 0.433865 8:+6948671 MsG0880042309.01.T01:five_prime_UTR
AAATTGGAGGTGCAAGGAAA+TGG 0.435614 8:-6948598 None:intergenic
CAAGTACAAATAAGAAATCT+AGG 0.438807 8:-6954347 None:intergenic
TCAATCCATACTAGTGGTCC+GGG 0.454228 8:-6952186 None:intergenic
GAGGTCTGTCAAAGAGCGTC+TGG 0.454404 8:+6948863 MsG0880042309.01.T01:CDS
TTGGAGTTGATGTTGTTAGC+TGG 0.455370 8:+6954159 MsG0880042309.01.T01:CDS
AACGTCAAGTTACTGGCAAA+AGG 0.456256 8:+6948916 MsG0880042309.01.T01:CDS
TCACGAAGATCCCGGGTGCT+TGG 0.467916 8:-6952389 None:intergenic
TCCCACTTGTCGTCTTGCCT+CGG 0.473641 8:-6952125 None:intergenic
TAAGAAATCTAGGAGATTGA+AGG 0.474924 8:-6954337 None:intergenic
CGTCTTAAGCTTCAAAAGAA+AGG 0.479333 8:+6952329 MsG0880042309.01.T01:CDS
AGGGAAAGTGCACACGATAA+GGG 0.492110 8:-6948711 None:intergenic
AGAGAGAGAGAAGGGATGGA+AGG 0.495344 8:-6948513 None:intergenic
GGCCGAGGCAAGACGACAAG+TGG 0.502610 8:+6952123 MsG0880042309.01.T01:intron
AGAATTGATAAGAAATTCAA+AGG 0.507130 8:-6948731 None:intergenic
ATAGTCTTTCACGAAGATCC+CGG 0.508123 8:-6952397 None:intergenic
GTTGAAGATGTATGCTGATC+GGG 0.513155 8:+6948824 MsG0880042309.01.T01:exon
CCCCATTGTCTACAAGCAGC+AGG 0.519765 8:-6954187 None:intergenic
AAAAGTCTGACAACTTATGT+TGG 0.537215 8:+6954140 MsG0880042309.01.T01:CDS
CGAAGAATCACAGAAAATTG+GGG 0.538917 8:+6948662 MsG0880042309.01.T01:five_prime_UTR
AAACCTCAGACAATGTCAAA+AGG 0.541486 8:-6954398 None:intergenic
GGTAATTAATGGAATTTCAG+AGG 0.542703 8:+6954369 MsG0880042309.01.T01:three_prime_UTR
AAGAAATCTAGGAGATTGAA+GGG 0.551661 8:-6954336 None:intergenic
GATGGAAGGTTAGGAAAGCC+CGG 0.557131 8:-6948499 None:intergenic
AGAGTTCTACTCCAAGCACC+CGG 0.558757 8:+6952378 MsG0880042309.01.T01:CDS
CTTCAACCTGCAACTCGAAG+TGG 0.558936 8:+6952353 MsG0880042309.01.T01:CDS
ATCCTGCTGCTTGTAGACAA+TGG 0.560577 8:+6954185 MsG0880042309.01.T01:CDS
CAGTAAGAGTGTTGGTGCTG+AGG 0.562523 8:+6952487 MsG0880042309.01.T01:CDS
TATGCTGATCGGGTGGAAAG+TGG 0.563013 8:+6948834 MsG0880042309.01.T01:CDS
GAAGCATCAGTGTGTCTACT+CGG 0.569291 8:+6948889 MsG0880042309.01.T01:CDS
TAGTCTTTCACGAAGATCCC+GGG 0.578558 8:-6952396 None:intergenic
TCTGTCAAAGAGCGTCTGGA+TGG 0.581049 8:+6948867 MsG0880042309.01.T01:CDS
GCACCAACACTCTTACTGCT+CGG 0.581136 8:-6952482 None:intergenic
GAATTGATAAGAAATTCAAA+GGG 0.582986 8:-6948730 None:intergenic
CGTACTCGTATTACGTATCC+GGG 0.586450 8:+6948481 None:intergenic
TGTTGAAGATGTATGCTGAT+CGG 0.611937 8:+6948823 MsG0880042309.01.T01:exon
TTTACAGGCTGGTACTACAG+TGG 0.613897 8:+6953177 MsG0880042309.01.T01:intron
AAACGTATGAATCGAAAGTG+TGG 0.615611 8:-6948574 None:intergenic
TATGACTGATGAGGACCTCA+AGG 0.624569 8:+6953451 MsG0880042309.01.T01:CDS
TTGCGGAGAATAAATAGTAG+CGG 0.625872 8:-6948627 None:intergenic
CCGGATACGTAATACGAGTA+CGG 0.626042 8:-6948480 None:intergenic
ATCGGGTGGAAAGTGGAGCA+AGG 0.630407 8:+6948841 MsG0880042309.01.T01:CDS
GCCGAGGCAAGACGACAAGT+GGG 0.630985 8:+6952124 MsG0880042309.01.T01:CDS
AAACCGAGCAGTAAGAGTGT+TGG 0.631050 8:+6952479 MsG0880042309.01.T01:CDS
GAGTTCTACTCCAAGCACCC+GGG 0.658924 8:+6952379 MsG0880042309.01.T01:CDS
TCTCAAACATATGACTGATG+AGG 0.661195 8:+6953442 MsG0880042309.01.T01:CDS
AATTAGGGTTCATAGATTTG+GGG 0.662495 8:+6948760 MsG0880042309.01.T01:five_prime_UTR
ATCTTCGTGAAAGACTATCA+GGG 0.665382 8:+6952402 MsG0880042309.01.T01:CDS
ATGTTGAACAAGAACAACCC+CGG 0.686471 8:+6952168 MsG0880042309.01.T01:CDS
CCTGCTGCTTGTAGACAATG+GGG 0.694963 8:+6954187 MsG0880042309.01.T01:CDS
CAATCCATACTAGTGGTCCG+GGG 0.710498 8:-6952185 None:intergenic
GAAGATGTATGCTGATCGGG+TGG 0.710745 8:+6948827 MsG0880042309.01.T01:exon
CTGCTGCTTGTAGACAATGG+GGG 0.719407 8:+6954188 MsG0880042309.01.T01:CDS
TTGGTATACCGATAACCTTG+AGG 0.742726 8:-6953466 None:intergenic
GGGTGGAAAGTGGAGCAAGG+AGG 0.750988 8:+6948844 MsG0880042309.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAAATAAAAGTAAATTAAA+AGG + Chr8:6953131-6953150 MsG0880042309.01.T01:intron 10.0%
!!! GTTTTATACATTTATATTAT+TGG + Chr8:6953840-6953859 MsG0880042309.01.T01:intron 10.0%
!!! TTAAAATGATTTTAGAAATA+GGG - Chr8:6951372-6951391 None:intergenic 10.0%
!! AAAATATTACTGAATAAAAC+AGG - Chr8:6953538-6953557 None:intergenic 15.0%
!! ACATAATTTAGAAATTATTC+CGG + Chr8:6951751-6951770 MsG0880042309.01.T01:intron 15.0%
!! ACATTGTGATTATATATTAT+TGG + Chr8:6954076-6954095 MsG0880042309.01.T01:intron 15.0%
!! AGGGAAAAAAAAAAAAAAAA+AGG - Chr8:6953287-6953306 None:intergenic 15.0%
!! ATGACTTATTAAGAATAAAT+AGG - Chr8:6950448-6950467 None:intergenic 15.0%
!!! ATTAACAAAAACATTTTCAT+TGG + Chr8:6949650-6949669 MsG0880042309.01.T01:intron 15.0%
!!! ATTATATATTATTGGTTCTA+GGG + Chr8:6954084-6954103 MsG0880042309.01.T01:intron 15.0%
!!! ATTTTTCAAATTCAAATGAT+TGG + Chr8:6949693-6949712 MsG0880042309.01.T01:intron 15.0%
!!! GTTAAAATGATTTTAGAAAT+AGG - Chr8:6951373-6951392 None:intergenic 15.0%
!!! TAAAATGATTTTAGAAATAG+GGG - Chr8:6951371-6951390 None:intergenic 15.0%
!!! TAGTTTTTTTACTTCATAAA+TGG + Chr8:6953680-6953699 MsG0880042309.01.T01:intron 15.0%
!!! TGTTAATTTTAGGTAAATAT+TGG + Chr8:6949176-6949195 MsG0880042309.01.T01:intron 15.0%
!!! TTATGATATGCTTTATTTTT+TGG + Chr8:6952098-6952117 MsG0880042309.01.T01:intron 15.0%
!!! TTTTTATTGTATCTACAAAA+AGG + Chr8:6952935-6952954 MsG0880042309.01.T01:intron 15.0%
!!! TTTTTGTAGATACAATAAAA+AGG - Chr8:6952936-6952955 None:intergenic 15.0%
!! AATATTATGATGTGAAAAGA+TGG + Chr8:6953795-6953814 MsG0880042309.01.T01:intron 20.0%
!! AGAATTGATAAGAAATTCAA+AGG - Chr8:6948734-6948753 None:intergenic 20.0%
!! ATATCTGTAGTATATATAAC+AGG - Chr8:6951873-6951892 None:intergenic 20.0%
!! ATTCATGTCTAAAAAAATAG+GGG - Chr8:6954286-6954305 None:intergenic 20.0%
!! GAATTGATAAGAAATTCAAA+GGG - Chr8:6948733-6948752 None:intergenic 20.0%
!! GATTCATGTCTAAAAAAATA+GGG - Chr8:6954287-6954306 None:intergenic 20.0%
!! TATAAAATACTCTACTGAAA+AGG - Chr8:6952040-6952059 None:intergenic 20.0%
!! TATAACTAATATCTACAAGA+TGG - Chr8:6951788-6951807 None:intergenic 20.0%
!! TATTAGCTAAAGTTAATTGA+TGG + Chr8:6951523-6951542 MsG0880042309.01.T01:intron 20.0%
!! TATTCTTAATAAGTCATTCT+AGG + Chr8:6950451-6950470 MsG0880042309.01.T01:intron 20.0%
!! TGAAAAACAAACTGAATAAA+GGG - Chr8:6951645-6951664 None:intergenic 20.0%
!! TGATTCATGTCTAAAAAAAT+AGG - Chr8:6954288-6954307 None:intergenic 20.0%
!!! AAAATGATTTTAGAAATAGG+GGG - Chr8:6951370-6951389 None:intergenic 20.0%
!!! AAATTTTGTTATTAGATGGT+GGG + Chr8:6949199-6949218 MsG0880042309.01.T01:intron 20.0%
!!! ATGTAATGTTCAATTTTATG+TGG + Chr8:6949045-6949064 MsG0880042309.01.T01:intron 20.0%
!!! ATGTTATTTCTTTTTGACAA+TGG + Chr8:6953606-6953625 MsG0880042309.01.T01:intron 20.0%
!!! CTTTTATTTAGTAAAGAAAC+TGG - Chr8:6953122-6953141 None:intergenic 20.0%
!!! GATTATATATTATTGGTTCT+AGG + Chr8:6954083-6954102 MsG0880042309.01.T01:intron 20.0%
!!! GATTTTCTTTTTTCTTTTTC+AGG + Chr8:6953406-6953425 MsG0880042309.01.T01:intron 20.0%
!!! GTTTCTCTTATAGTTTTTAT+AGG - Chr8:6949253-6949272 None:intergenic 20.0%
!!! TAGAAAGTGATGTTAATTTT+AGG + Chr8:6949166-6949185 MsG0880042309.01.T01:intron 20.0%
!!! TATTTGTACTTGGTAATTAA+TGG + Chr8:6954358-6954377 MsG0880042309.01.T01:three_prime_UTR 20.0%
!!! TATTTTTTTAGACATGAATC+AGG + Chr8:6954287-6954306 MsG0880042309.01.T01:three_prime_UTR 20.0%
!!! TGTTCATTTCAATTTTTCTT+TGG + Chr8:6951038-6951057 MsG0880042309.01.T01:intron 20.0%
!!! TTATATATTATTGGTTCTAG+GGG + Chr8:6954085-6954104 MsG0880042309.01.T01:intron 20.0%
!!! TTGGAAATTTTGTTATTAGA+TGG + Chr8:6949195-6949214 MsG0880042309.01.T01:intron 20.0%
!!! TTTCATTGGAGTAATATTTT+TGG + Chr8:6949664-6949683 MsG0880042309.01.T01:intron 20.0%
!!! TTTTGTGTTTTTGATGATTT+AGG + Chr8:6948987-6949006 MsG0880042309.01.T01:intron 20.0%
!!! TTTTTCTTTTCTTCTTTTAC+AGG + Chr8:6953162-6953181 MsG0880042309.01.T01:intron 20.0%
! AAAAAATACAGTGGAATCAA+TGG - Chr8:6951446-6951465 None:intergenic 25.0%
! AAAAGGTAATCAATTGTAGT+CGG + Chr8:6952952-6952971 MsG0880042309.01.T01:intron 25.0%
! AAATTCTGATGAAATTCACA+CGG - Chr8:6950708-6950727 None:intergenic 25.0%
! AATAAACTAACCATTAGTGA+GGG + Chr8:6949738-6949757 MsG0880042309.01.T01:intron 25.0%
! AATCGAAGACAATAAATGTA+TGG - Chr8:6951956-6951975 None:intergenic 25.0%
! ACAGACATATTTAGAAAATC+AGG + Chr8:6951664-6951683 MsG0880042309.01.T01:intron 25.0%
! ACCCATAAAAAAAGAACTAT+TGG - Chr8:6952255-6952274 None:intergenic 25.0%
! AGAAAGTTCATTATCTTAAC+TGG + Chr8:6953340-6953359 MsG0880042309.01.T01:intron 25.0%
! AGATTTGAAGATTAATGAGT+TGG + Chr8:6949282-6949301 MsG0880042309.01.T01:intron 25.0%
! ATATTTAGAAAATCAGGCAT+GGG + Chr8:6951670-6951689 MsG0880042309.01.T01:intron 25.0%
! ATGTCTCTGTAAATAAATCT+TGG + Chr8:6949812-6949831 MsG0880042309.01.T01:intron 25.0%
! CAAGTACAAATAAGAAATCT+AGG - Chr8:6954350-6954369 None:intergenic 25.0%
! GAAAGTTCATTATCTTAACT+GGG + Chr8:6953341-6953360 MsG0880042309.01.T01:intron 25.0%
! GGTTAGATTTGTAGTTTATT+TGG + Chr8:6954308-6954327 MsG0880042309.01.T01:three_prime_UTR 25.0%
! GTAATTCAACATATGAATGA+AGG - Chr8:6952015-6952034 None:intergenic 25.0%
! GTGAAAAACAAACTGAATAA+AGG - Chr8:6951646-6951665 None:intergenic 25.0%
! TAGTTTCTCCAAAAACTTAT+AGG - Chr8:6950929-6950948 None:intergenic 25.0%
! TTATAGCATCATATATTGTC+AGG + Chr8:6951894-6951913 MsG0880042309.01.T01:intron 25.0%
! TTCATGATAATTGTAGTTTC+AGG + Chr8:6953043-6953062 MsG0880042309.01.T01:intron 25.0%
! TTCTCTGTAAAATGTGTAAT+TGG - Chr8:6951142-6951161 None:intergenic 25.0%
!! AAAGAAGATACTTTTAGCAT+TGG + Chr8:6954113-6954132 MsG0880042309.01.T01:CDS 25.0%
!! AAGTTAGACCTATAAGTTTT+TGG + Chr8:6950918-6950937 MsG0880042309.01.T01:intron 25.0%
!! AGAATTTATATCAAGAGTGT+TGG + Chr8:6950721-6950740 MsG0880042309.01.T01:intron 25.0%
!! ATCAATTCTGATTCGAATTA+GGG + Chr8:6948745-6948764 MsG0880042309.01.T01:five_prime_UTR 25.0%
!! CTAATATTTTCAACAGAGAT+TGG - Chr8:6951509-6951528 None:intergenic 25.0%
!! CTAGATTTCTTATTTGTACT+TGG + Chr8:6954348-6954367 MsG0880042309.01.T01:three_prime_UTR 25.0%
!! GTTGCAAACATGTTTTATAA+AGG + Chr8:6953772-6953791 MsG0880042309.01.T01:intron 25.0%
!! TATCAATTCTGATTCGAATT+AGG + Chr8:6948744-6948763 MsG0880042309.01.T01:five_prime_UTR 25.0%
!! TATCATGAAGTTGATTCAAA+GGG - Chr8:6953032-6953051 None:intergenic 25.0%
!! TATTTTGTAGCTTACTGAAA+TGG - Chr8:6950063-6950082 None:intergenic 25.0%
!! TTATCATGAAGTTGATTCAA+AGG - Chr8:6953033-6953052 None:intergenic 25.0%
!! TTCCTATTCTCCATTTTATA+AGG - Chr8:6950877-6950896 None:intergenic 25.0%
!!! AAAGTATCTCATAACTTTTC+AGG + Chr8:6953228-6953247 MsG0880042309.01.T01:CDS 25.0%
!!! ATCTTAACTGGGTTTTAATT+AGG + Chr8:6953352-6953371 MsG0880042309.01.T01:intron 25.0%
!!! GAAATTTTGTTATTAGATGG+TGG + Chr8:6949198-6949217 MsG0880042309.01.T01:intron 25.0%
!!! GCCAATAGTTCTTTTTTTAT+GGG + Chr8:6952251-6952270 MsG0880042309.01.T01:intron 25.0%
!!! GTAATATTTTGTAGTTCTAC+AGG + Chr8:6953548-6953567 MsG0880042309.01.T01:intron 25.0%
!!! TGCCAATAGTTCTTTTTTTA+TGG + Chr8:6952250-6952269 MsG0880042309.01.T01:intron 25.0%
AAAAGTCTGACAACTTATGT+TGG + Chr8:6954140-6954159 MsG0880042309.01.T01:CDS 30.0%
AAATAAATCTTGGCTGTTGA+TGG + Chr8:6949822-6949841 MsG0880042309.01.T01:intron 30.0%
AAATGATTGGAGAAAGAAGT+TGG + Chr8:6949706-6949725 MsG0880042309.01.T01:intron 30.0%
AACAAATCAATCCATACTAG+TGG - Chr8:6952195-6952214 None:intergenic 30.0%
AAGAAATCTAGGAGATTGAA+GGG - Chr8:6954339-6954358 None:intergenic 30.0%
AATTAGGGTTCATAGATTTG+GGG + Chr8:6948760-6948779 MsG0880042309.01.T01:five_prime_UTR 30.0%
AATTCTGATGAAATTCACAC+GGG - Chr8:6950707-6950726 None:intergenic 30.0%
ACAGACATGTCAAAGAAAAA+GGG - Chr8:6952653-6952672 None:intergenic 30.0%
ACTTCTCTTTAGACTTAAAG+TGG - Chr8:6950578-6950597 None:intergenic 30.0%
AGATAATGAACTTTCTCCAA+CGG - Chr8:6953336-6953355 None:intergenic 30.0%
ATAAACTAACCATTAGTGAG+GGG + Chr8:6949739-6949758 MsG0880042309.01.T01:intron 30.0%
ATCATATACCTCGAAAACAA+AGG - Chr8:6949123-6949142 None:intergenic 30.0%
ATGGGAAGAATTTACATCAT+TGG + Chr8:6951688-6951707 MsG0880042309.01.T01:intron 30.0%
ATTTAGTGCTTGCTTATAGA+GGG + Chr8:6952774-6952793 MsG0880042309.01.T01:intron 30.0%
CATATTTAGAAAATCAGGCA+TGG + Chr8:6951669-6951688 MsG0880042309.01.T01:intron 30.0%
CATTCATAGTACTATACTTG+TGG - Chr8:6952908-6952927 None:intergenic 30.0%
CTGTATGGAAAAAAATACAG+TGG - Chr8:6951455-6951474 None:intergenic 30.0%
GAAGAATTTACATCATTGGT+GGG + Chr8:6951692-6951711 MsG0880042309.01.T01:intron 30.0%
GAATAAACTAACCATTAGTG+AGG + Chr8:6949737-6949756 MsG0880042309.01.T01:intron 30.0%
GAATTAGGGTTCATAGATTT+GGG + Chr8:6948759-6948778 MsG0880042309.01.T01:five_prime_UTR 30.0%
GACCTTATAAAATGGAGAAT+AGG + Chr8:6950872-6950891 MsG0880042309.01.T01:intron 30.0%
GGTAATTAATGGAATTTCAG+AGG + Chr8:6954369-6954388 MsG0880042309.01.T01:three_prime_UTR 30.0%
TAAGAAATCTAGGAGATTGA+AGG - Chr8:6954340-6954359 None:intergenic 30.0%
TCGAAGAATCACAGAAAATT+GGG + Chr8:6948661-6948680 MsG0880042309.01.T01:five_prime_UTR 30.0%
TGGCATATGATAGAACAATA+TGG + Chr8:6949314-6949333 MsG0880042309.01.T01:intron 30.0%
TTATTCATATCCACAAGTGA+AGG - Chr8:6953006-6953025 None:intergenic 30.0%
TTCGAAGAATCACAGAAAAT+TGG + Chr8:6948660-6948679 MsG0880042309.01.T01:five_prime_UTR 30.0%
TTTCTGTGATTCTTCGAAAA+AGG - Chr8:6948658-6948677 None:intergenic 30.0%
! AATAGCTAGAAAAGAGGTAT+TGG - Chr8:6951326-6951345 None:intergenic 30.0%
! ACGTATTGATAGAATTGTCT+GGG + Chr8:6949872-6949891 MsG0880042309.01.T01:intron 30.0%
! AGAATGATAATGAGAAAGAC+AGG - Chr8:6951168-6951187 None:intergenic 30.0%
! ATCATGAAGTTGATTCAAAG+GGG - Chr8:6953031-6953050 None:intergenic 30.0%
! GAATGATAATGAGAAAGACA+GGG - Chr8:6951167-6951186 None:intergenic 30.0%
! TAATGAGTTGGATAGAAATG+TGG + Chr8:6949294-6949313 MsG0880042309.01.T01:intron 30.0%
! TAATTGTAGTTTCAGGTGTT+AGG + Chr8:6953050-6953069 MsG0880042309.01.T01:intron 30.0%
! TACGTATTGATAGAATTGTC+TGG + Chr8:6949871-6949890 MsG0880042309.01.T01:intron 30.0%
! TTAAAGTAGTATCGAGCTTT+GGG + Chr8:6953885-6953904 MsG0880042309.01.T01:intron 30.0%
! TTTAAAGTAGTATCGAGCTT+TGG + Chr8:6953884-6953903 MsG0880042309.01.T01:intron 30.0%
! TTTTCTGCCATAATCCAATA+TGG + Chr8:6949446-6949465 MsG0880042309.01.T01:intron 30.0%
!! ATAGCTAGAAAAGAGGTATT+GGG - Chr8:6951325-6951344 None:intergenic 30.0%
!! GCTAAAAGTATCTTCTTTCT+TGG - Chr8:6954111-6954130 None:intergenic 30.0%
!! TGTTTTTGATGATTTAGGTG+TGG + Chr8:6948992-6949011 MsG0880042309.01.T01:intron 30.0%
!!! AATCGAAAGTGTGGATTTTT+TGG - Chr8:6948568-6948587 None:intergenic 30.0%
!!! ATAGTAGCGGTTTTGAAAAT+TGG - Chr8:6948617-6948636 None:intergenic 30.0%
!!! ATGTGGTGTTTTAGTGATTT+TGG + Chr8:6949062-6949081 MsG0880042309.01.T01:intron 30.0%
!!! CACTGTATTTTTTTCCATAC+AGG + Chr8:6951453-6951472 MsG0880042309.01.T01:intron 30.0%
!!! CTGAGGTTTTAATTTAACAC+TGG + Chr8:6954412-6954431 MsG0880042309.01.T01:three_prime_UTR 30.0%
!!! CTTTCTTTTGAAGCTTAAGA+CGG - Chr8:6952331-6952350 None:intergenic 30.0%
!!! GATATGCTTTATTTTTTGGC+AGG + Chr8:6952102-6952121 MsG0880042309.01.T01:intron 30.0%
!!! GGCTTAATTGTTGTTTTTGT+TGG + Chr8:6949542-6949561 MsG0880042309.01.T01:intron 30.0%
!!! TGTGGTGTTTTAGTGATTTT+GGG + Chr8:6949063-6949082 MsG0880042309.01.T01:intron 30.0%
!!! TTAGCAATCACTTTTGACTT+CGG - Chr8:6952461-6952480 None:intergenic 30.0%
!!! TTTTTTTGTTCAGTCAGAGT+TGG - Chr8:6949973-6949992 None:intergenic 30.0%
AAACATGTTTGCAACACAAC+AGG - Chr8:6953767-6953786 None:intergenic 35.0%
AAACCTCAGACAATGTCAAA+AGG - Chr8:6954401-6954420 None:intergenic 35.0%
AAACGTATGAATCGAAAGTG+TGG - Chr8:6948577-6948596 None:intergenic 35.0%
AAAGTTTGTACCTTCACTTG+TGG + Chr8:6952993-6953012 MsG0880042309.01.T01:intron 35.0%
AAGAACAAACAAGGACTTAG+AGG - Chr8:6950768-6950787 None:intergenic 35.0%
AAGAGAAGTAGGCTATTAGA+AGG - Chr8:6953307-6953326 None:intergenic 35.0%
AAGATACATGCACATCTCAA+AGG - Chr8:6952709-6952728 None:intergenic 35.0%
ACAGAAAATTGGGGTTGTTA+GGG + Chr8:6948671-6948690 MsG0880042309.01.T01:five_prime_UTR 35.0%
ACATATGAATGAAGGAGACT+TGG - Chr8:6952007-6952026 None:intergenic 35.0%
ACGCCAATATTTGACAACAT+TGG - Chr8:6949360-6949379 None:intergenic 35.0%
AGAGAAGTAGGCTATTAGAA+GGG - Chr8:6953306-6953325 None:intergenic 35.0%
AGGTATAATGTTGGGGTTAT+GGG + Chr8:6950184-6950203 MsG0880042309.01.T01:intron 35.0%
ATCTTCGTGAAAGACTATCA+GGG + Chr8:6952402-6952421 MsG0880042309.01.T01:CDS 35.0%
CAAGATGGTCAATTAAACAC+CGG - Chr8:6951773-6951792 None:intergenic 35.0%
CAAGTATAAGTTACCACTGT+TGG + Chr8:6952226-6952245 MsG0880042309.01.T01:intron 35.0%
CACAGACATGTCAAAGAAAA+AGG - Chr8:6952654-6952673 None:intergenic 35.0%
CATTTAGTGCTTGCTTATAG+AGG + Chr8:6952773-6952792 MsG0880042309.01.T01:intron 35.0%
CCTAGTTTGAATTAGCGTAT+GGG + Chr8:6950825-6950844 MsG0880042309.01.T01:intron 35.0%
CGAAGAATCACAGAAAATTG+GGG + Chr8:6948662-6948681 MsG0880042309.01.T01:five_prime_UTR 35.0%
CGAATTAGGGTTCATAGATT+TGG + Chr8:6948758-6948777 MsG0880042309.01.T01:five_prime_UTR 35.0%
CGCCAATATTTGACAACATT+GGG - Chr8:6949359-6949378 None:intergenic 35.0%
CGTCTTAAGCTTCAAAAGAA+AGG + Chr8:6952329-6952348 MsG0880042309.01.T01:CDS 35.0%
CTTCGAAAAAGGAATTGTTG+CGG - Chr8:6948647-6948666 None:intergenic 35.0%
CTTGTGATAAAGTCGAGTTA+CGG + Chr8:6950959-6950978 MsG0880042309.01.T01:intron 35.0%
GATAAGCTAAGCATACTCTT+AGG + Chr8:6954007-6954026 MsG0880042309.01.T01:intron 35.0%
GCGTATTAATAAAGCCTGTA+TGG - Chr8:6951470-6951489 None:intergenic 35.0%
GCTTAGCTTATCTTAAAGCA+AGG - Chr8:6953999-6954018 None:intergenic 35.0%
GGAAGAATTTACATCATTGG+TGG + Chr8:6951691-6951710 MsG0880042309.01.T01:intron 35.0%
GGCATTAAGAAGAACAAACA+AGG - Chr8:6950777-6950796 None:intergenic 35.0%
GGTTTGATCTGTGTTTGATT+TGG + Chr8:6954028-6954047 MsG0880042309.01.T01:intron 35.0%
GTACTGTATTGCAATGTGTT+TGG + Chr8:6952815-6952834 MsG0880042309.01.T01:intron 35.0%
GTCTGAGAGACCTTATAAAA+TGG + Chr8:6950864-6950883 MsG0880042309.01.T01:intron 35.0%
TAAAACGATGTCAGAAACTC+CGG - Chr8:6953923-6953942 None:intergenic 35.0%
TATTGCAATGTGTTTGGCTA+TGG + Chr8:6952821-6952840 MsG0880042309.01.T01:intron 35.0%
TATTGTCAGGTCATTTCCAT+TGG + Chr8:6951907-6951926 MsG0880042309.01.T01:intron 35.0%
TCAATGCAGTGTAAAACTTG+CGG - Chr8:6951825-6951844 None:intergenic 35.0%
TCATATGACTCCCTTTAAAC+CGG + Chr8:6950655-6950674 MsG0880042309.01.T01:intron 35.0%
TCCTAGTTTGAATTAGCGTA+TGG + Chr8:6950824-6950843 MsG0880042309.01.T01:intron 35.0%
TCTAGTGGAAGAAGATGAAA+AGG - Chr8:6952873-6952892 None:intergenic 35.0%
TCTCAAACATATGACTGATG+AGG + Chr8:6953442-6953461 MsG0880042309.01.T01:CDS 35.0%
TCTGACTACATTTCTACCAA+TGG - Chr8:6951926-6951945 None:intergenic 35.0%
TGTCAAAGAAAAAGGGACAA+TGG - Chr8:6952646-6952665 None:intergenic 35.0%
TGTTGAAGATGTATGCTGAT+CGG + Chr8:6948823-6948842 MsG0880042309.01.T01:exon 35.0%
TTAATACAGCAATGACAACG+AGG - Chr8:6949635-6949654 None:intergenic 35.0%
TTCTTCCACTAGATAACTGT+TGG + Chr8:6952880-6952899 MsG0880042309.01.T01:intron 35.0%
TTGCGGAGAATAAATAGTAG+CGG - Chr8:6948630-6948649 None:intergenic 35.0%
TTGTCAGATGCTATTCGTAT+GGG + Chr8:6950543-6950562 MsG0880042309.01.T01:intron 35.0%
TTTGTCAGATGCTATTCGTA+TGG + Chr8:6950542-6950561 MsG0880042309.01.T01:intron 35.0%
! ACTAGTTTGATGCATACCAT+TGG - Chr8:6953488-6953507 None:intergenic 35.0%
! AGTAATTTGTGTGAGGTCTT+TGG + Chr8:6949602-6949621 MsG0880042309.01.T01:intron 35.0%
! CAAGTTTTACACTGCATTGA+GGG + Chr8:6951825-6951844 MsG0880042309.01.T01:intron 35.0%
! CAGTGGAATCAATGGATTTA+TGG - Chr8:6951438-6951457 None:intergenic 35.0%
! GATGAATTTTTGCTGACCTT+GGG + Chr8:6953199-6953218 MsG0880042309.01.T01:CDS 35.0%
! GTAATTTGTGTGAGGTCTTT+GGG + Chr8:6949603-6949622 MsG0880042309.01.T01:intron 35.0%
! TCTTTTCTTCTTTTACAGGC+TGG + Chr8:6953166-6953185 MsG0880042309.01.T01:intron 35.0%
! TTTGGAGTGAGTTTACACTT+TGG + Chr8:6950130-6950149 MsG0880042309.01.T01:intron 35.0%
!! CTCTTGCTTTTCCTGTTAAA+CGG + Chr8:6952676-6952695 MsG0880042309.01.T01:intron 35.0%
!! TAAGCCTTATTCCACTAAGT+GGG - Chr8:6949528-6949547 None:intergenic 35.0%
!! TCTTGCTTTTCCTGTTAAAC+GGG + Chr8:6952677-6952696 MsG0880042309.01.T01:intron 35.0%
!! TTAAGCCTTATTCCACTAAG+TGG - Chr8:6949529-6949548 None:intergenic 35.0%
!! TTTTGAAAATTGGAGGTGCA+AGG - Chr8:6948607-6948626 None:intergenic 35.0%
!!! ATCATTGGTGGGTTTTTTCT+GGG + Chr8:6951703-6951722 MsG0880042309.01.T01:intron 35.0%
!!! GATTTTTTGGAGTGAGGTTT+TGG - Chr8:6948555-6948574 None:intergenic 35.0%
!!! GGGTTTTGACTGTTTGTTAA+TGG + Chr8:6952271-6952290 MsG0880042309.01.T01:intron 35.0%
!!! TTTGTAAGCCTTTGTTTTCG+AGG + Chr8:6949112-6949131 MsG0880042309.01.T01:intron 35.0%
AAAGTCCAACGCTTAACAAC+AGG + Chr8:6950094-6950113 MsG0880042309.01.T01:intron 40.0%
AAATGCAGAGTCTTCATCAC+TGG - Chr8:6951102-6951121 None:intergenic 40.0%
AAATGGAGAATAGGAAGCTG+AGG + Chr8:6950881-6950900 MsG0880042309.01.T01:intron 40.0%
AACACATGCATTTCAGGCTA+AGG - Chr8:6949902-6949921 None:intergenic 40.0%
AACGGAGGAAAAAGAGAAGT+AGG - Chr8:6953318-6953337 None:intergenic 40.0%
AACGTCAAGTTACTGGCAAA+AGG + Chr8:6948916-6948935 MsG0880042309.01.T01:CDS 40.0%
AAGTCCAACGCTTAACAACA+GGG + Chr8:6950095-6950114 MsG0880042309.01.T01:intron 40.0%
AATATAGCTAGCTAGACCTG+GGG + Chr8:6950156-6950175 MsG0880042309.01.T01:intron 40.0%
AATGGAGAATAGGAAGCTGA+GGG + Chr8:6950882-6950901 MsG0880042309.01.T01:intron 40.0%
ACTTGAGATGATTCTCACCT+TGG - Chr8:6949765-6949784 None:intergenic 40.0%
ACTTTCTGACTCAAGCACAA+AGG + Chr8:6951207-6951226 MsG0880042309.01.T01:intron 40.0%
AGTAATGACAGAGAAGGACT+AGG + Chr8:6950391-6950410 MsG0880042309.01.T01:intron 40.0%
AGTGCTAGAAACACACTCTT+TGG + Chr8:6950595-6950614 MsG0880042309.01.T01:intron 40.0%
AGTTAAATCGCTAGAGGTAG+AGG + Chr8:6949223-6949242 MsG0880042309.01.T01:intron 40.0%
ATAATGTTGGGGTTATGGGT+TGG + Chr8:6950188-6950207 MsG0880042309.01.T01:intron 40.0%
ATAGTCTTTCACGAAGATCC+CGG - Chr8:6952400-6952419 None:intergenic 40.0%
ATCAATCCATACTAGTGGTC+CGG - Chr8:6952190-6952209 None:intergenic 40.0%
ATGGCATTGTTTGATCCATG+TGG + Chr8:6949333-6949352 MsG0880042309.01.T01:intron 40.0%
ATGTTGAACAAGAACAACCC+CGG + Chr8:6952168-6952187 MsG0880042309.01.T01:CDS 40.0%
ATGTTTGCAACACAACAGGA+TGG - Chr8:6953763-6953782 None:intergenic 40.0%
ATTGGAGAAAGAAGTTGGAG+TGG + Chr8:6949711-6949730 MsG0880042309.01.T01:intron 40.0%
ATTGTCAATTTCGGCCGATA+TGG + Chr8:6949418-6949437 MsG0880042309.01.T01:intron 40.0%
CAACAAAGATGTCGATCAAC+AGG - Chr8:6952600-6952619 None:intergenic 40.0%
CAAGGTTATCGGTATACCAA+TGG + Chr8:6953469-6953488 MsG0880042309.01.T01:intron 40.0%
CACAGAAAATTGGGGTTGTT+AGG + Chr8:6948670-6948689 MsG0880042309.01.T01:five_prime_UTR 40.0%
CCCATACGCTAATTCAAACT+AGG - Chr8:6950828-6950847 None:intergenic 40.0%
CTCTCCAGCATTGTCAATTT+CGG + Chr8:6949409-6949428 MsG0880042309.01.T01:intron 40.0%
CTTAACAACAGGGTCAGATT+TGG + Chr8:6950105-6950124 MsG0880042309.01.T01:intron 40.0%
CTTCATCACTGGAAGATAGT+TGG - Chr8:6951091-6951110 None:intergenic 40.0%
GAATATAGCTAGCTAGACCT+GGG + Chr8:6950155-6950174 MsG0880042309.01.T01:intron 40.0%
GACAGAACAGCACTACAATT+GGG - Chr8:6949927-6949946 None:intergenic 40.0%
GAGAGAAGTAATGACAGAGA+AGG + Chr8:6950385-6950404 MsG0880042309.01.T01:intron 40.0%
GAGGTATAATGTTGGGGTTA+TGG + Chr8:6950183-6950202 MsG0880042309.01.T01:intron 40.0%
GAGGTTGAAGGGAAAATGAA+TGG - Chr8:6951395-6951414 None:intergenic 40.0%
GATCTTCGTGAAAGACTATC+AGG + Chr8:6952401-6952420 MsG0880042309.01.T01:CDS 40.0%
GGAGGAAATAGCTAGAAAAG+AGG - Chr8:6951332-6951351 None:intergenic 40.0%
GGCAGAAAATCTAGCCATAT+CGG - Chr8:6949435-6949454 None:intergenic 40.0%
GGCCCAATGTTGTCAAATAT+TGG + Chr8:6949354-6949373 MsG0880042309.01.T01:intron 40.0%
GTAATGACAGAGAAGGACTA+GGG + Chr8:6950392-6950411 MsG0880042309.01.T01:intron 40.0%
GTTGAAGATGTATGCTGATC+GGG + Chr8:6948824-6948843 MsG0880042309.01.T01:exon 40.0%
GTTGTCAAATATTGGCGTCA+TGG + Chr8:6949362-6949381 MsG0880042309.01.T01:intron 40.0%
TAATGAACTTTCTCCAACGG+AGG - Chr8:6953333-6953352 None:intergenic 40.0%
TAATGACAGAGAAGGACTAG+GGG + Chr8:6950393-6950412 MsG0880042309.01.T01:intron 40.0%
TAGCTAGCTGTACTGTTGAT+GGG + Chr8:6950212-6950231 MsG0880042309.01.T01:intron 40.0%
TCTGCCATAATCCAATATGG+CGG + Chr8:6949449-6949468 MsG0880042309.01.T01:intron 40.0%
TGAATATAGCTAGCTAGACC+TGG + Chr8:6950154-6950173 MsG0880042309.01.T01:intron 40.0%
TGACAGAACAGCACTACAAT+TGG - Chr8:6949928-6949947 None:intergenic 40.0%
TGGGTAAACACATGCATTTC+AGG - Chr8:6949908-6949927 None:intergenic 40.0%
TGGTACCAACAGTTATCTAG+TGG - Chr8:6952888-6952907 None:intergenic 40.0%
TGTCGATCAACAGGTTTAAG+TGG - Chr8:6952591-6952610 None:intergenic 40.0%
TGTGAAGATCGCAAAGTTAC+TGG + Chr8:6952296-6952315 MsG0880042309.01.T01:intron 40.0%
TTCACTCCTCAATCTGATTC+TGG - Chr8:6950802-6950821 None:intergenic 40.0%
TTGGTATACCGATAACCTTG+AGG - Chr8:6953469-6953488 None:intergenic 40.0%
! AAATTGGAGGTGCAAGGAAA+TGG - Chr8:6948601-6948620 None:intergenic 40.0%
! ATAGAGGGTATACTGATGGT+CGG + Chr8:6952789-6952808 MsG0880042309.01.T01:intron 40.0%
! ATTACCTTCCGTGCCTTTTT+GGG - Chr8:6952545-6952564 None:intergenic 40.0%
! GAAAGTGTACTAGTGTGTGT+AGG + Chr8:6950265-6950284 MsG0880042309.01.T01:intron 40.0%
! GCAAGTTTTACACTGCATTG+AGG + Chr8:6951824-6951843 MsG0880042309.01.T01:intron 40.0%
! GCTTATAGAGGGTATACTGA+TGG + Chr8:6952785-6952804 MsG0880042309.01.T01:intron 40.0%
! GGACTTGAGTAATTTGTGTG+AGG + Chr8:6949595-6949614 MsG0880042309.01.T01:intron 40.0%
! GGATGAATTTTTGCTGACCT+TGG + Chr8:6953198-6953217 MsG0880042309.01.T01:CDS 40.0%
! TACTTCTCTTTTTCCTCCGT+TGG + Chr8:6953317-6953336 MsG0880042309.01.T01:intron 40.0%
! TATTACCTTCCGTGCCTTTT+TGG - Chr8:6952546-6952565 None:intergenic 40.0%
!! AAGCCTTATTCCACTAAGTG+GGG - Chr8:6949527-6949546 None:intergenic 40.0%
!! CATAGAGTGAGTGTTGGAAA+GGG - Chr8:6950623-6950642 None:intergenic 40.0%
!! CTTGCTTTTCCTGTTAAACG+GGG + Chr8:6952678-6952697 MsG0880042309.01.T01:intron 40.0%
!! GAGATACTTTTCAAGACCCA+AGG - Chr8:6953218-6953237 None:intergenic 40.0%
!! TTGGAGTTGATGTTGTTAGC+TGG + Chr8:6954159-6954178 MsG0880042309.01.T01:CDS 40.0%
!!! AGTGTGGATTTTTTGGAGTG+AGG - Chr8:6948561-6948580 None:intergenic 40.0%
!!! CAATCACTTTTGACTTCGGT+GGG - Chr8:6952457-6952476 None:intergenic 40.0%
!!! CATCATTGGTGGGTTTTTTC+TGG + Chr8:6951702-6951721 MsG0880042309.01.T01:intron 40.0%
!!! GTAGCGGTTTTGAAAATTGG+AGG - Chr8:6948614-6948633 None:intergenic 40.0%
!!! GTTGTTAAGCGTTGGACTTT+TGG - Chr8:6950094-6950113 None:intergenic 40.0%
AAAGCCCTTCTAGCAGCTAA+AGG - Chr8:6949850-6949869 None:intergenic 45.0%
AAGGACATACCCCGTTTAAC+AGG - Chr8:6952690-6952709 None:intergenic 45.0%
ACAGGGTCAGATTTGGACTT+TGG + Chr8:6950112-6950131 MsG0880042309.01.T01:intron 45.0%
ACTCCCTTTAAACCGGTAAC+AGG + Chr8:6950662-6950681 MsG0880042309.01.T01:intron 45.0%
ACTCCTCAATCTGATTCTGG+AGG - Chr8:6950799-6950818 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAGAA+GGG - Chr8:6948524-6948543 None:intergenic 45.0%
AGCTAGCTGTACTGTTGATG+GGG + Chr8:6950213-6950232 MsG0880042309.01.T01:intron 45.0%
AGGGGGTGACAAAAAGAGAA+GGG - Chr8:6951353-6951372 None:intergenic 45.0%
ATATAGCTAGCTAGACCTGG+GGG + Chr8:6950157-6950176 MsG0880042309.01.T01:intron 45.0%
ATTGGCGTCATGGAGGATAT+CGG + Chr8:6949372-6949391 MsG0880042309.01.T01:intron 45.0%
CCTTTCCAACACTCACTCTA+TGG + Chr8:6950621-6950640 MsG0880042309.01.T01:intron 45.0%
CGGAATCAACGTCAAGTTAC+TGG + Chr8:6948909-6948928 MsG0880042309.01.T01:CDS 45.0%
CTAGCTAGCTGTACTGTTGA+TGG + Chr8:6950211-6950230 MsG0880042309.01.T01:intron 45.0%
CTCCCTTTAAACCGGTAACA+GGG + Chr8:6950663-6950682 MsG0880042309.01.T01:intron 45.0%
CTCCTCAATCTGATTCTGGA+GGG - Chr8:6950798-6950817 None:intergenic 45.0%
CTTATTCCACTAAGTGGGGT+CGG - Chr8:6949523-6949542 None:intergenic 45.0%
CTTCCACCCTCTATTTATCC+AGG - Chr8:6950331-6950350 None:intergenic 45.0%
GAACTATTGGCATCCAACAG+TGG - Chr8:6952242-6952261 None:intergenic 45.0%
GAGCCAAAATCCTTCCATAC+CGG - Chr8:6949475-6949494 None:intergenic 45.0%
GATGAGGACCTCAAGGTTAT+CGG + Chr8:6953458-6953477 MsG0880042309.01.T01:CDS 45.0%
GCAGGACCTGGATAAATAGA+GGG + Chr8:6950322-6950341 MsG0880042309.01.T01:intron 45.0%
GGAACCTTTAGCTGCTAGAA+GGG + Chr8:6949843-6949862 MsG0880042309.01.T01:intron 45.0%
GGAACTCACCAGTGTTAAAC+AGG - Chr8:6950042-6950061 None:intergenic 45.0%
GGATAAATAGAGGGTGGAAG+TGG + Chr8:6950331-6950350 MsG0880042309.01.T01:intron 45.0%
GTACAGTGCCTGTTTAACAC+TGG + Chr8:6950031-6950050 MsG0880042309.01.T01:intron 45.0%
GTCAAATATTGGCGTCATGG+AGG + Chr8:6949365-6949384 MsG0880042309.01.T01:intron 45.0%
GTGGGTAGTTAAATCGCTAG+AGG + Chr8:6949217-6949236 MsG0880042309.01.T01:intron 45.0%
GTGTAGGTGAGGAAGAAGAT+GGG + Chr8:6950281-6950300 MsG0880042309.01.T01:intron 45.0%
TACGATTGAGGTAGGGATGA+GGG + Chr8:6949574-6949593 MsG0880042309.01.T01:intron 45.0%
TAGGGGGTGACAAAAAGAGA+AGG - Chr8:6951354-6951373 None:intergenic 45.0%
TAGTCTTTCACGAAGATCCC+GGG - Chr8:6952399-6952418 None:intergenic 45.0%
TATGACTGATGAGGACCTCA+AGG + Chr8:6953451-6953470 MsG0880042309.01.T01:CDS 45.0%
TATGGCTCACATGAGCAAGA+GGG - Chr8:6951420-6951439 None:intergenic 45.0%
TCAATCCATACTAGTGGTCC+GGG - Chr8:6952189-6952208 None:intergenic 45.0%
TCCAACACTCACTCTATGGT+CGG + Chr8:6950625-6950644 MsG0880042309.01.T01:intron 45.0%
TCCTAAGACCAGTACACTCT+GGG - Chr8:6951260-6951279 None:intergenic 45.0%
TGAAATATAGAGGCAGGACC+TGG + Chr8:6950310-6950329 MsG0880042309.01.T01:intron 45.0%
TGCCCAATATGCCTTGGATA+GGG + Chr8:6951291-6951310 MsG0880042309.01.T01:intron 45.0%
TGCCCTATCCAAGGCATATT+GGG - Chr8:6951296-6951315 None:intergenic 45.0%
TGCTTGAGTCAGAAAGTGAC+AGG - Chr8:6951204-6951223 None:intergenic 45.0%
TGGAACCTTTAGCTGCTAGA+AGG + Chr8:6949842-6949861 MsG0880042309.01.T01:intron 45.0%
TGGGTTCGGGTGAAATATAG+AGG + Chr8:6950300-6950319 MsG0880042309.01.T01:intron 45.0%
TGTACTAGTGTGTGTAGGTG+AGG + Chr8:6950270-6950289 MsG0880042309.01.T01:intron 45.0%
TGTGTAGGTGAGGAAGAAGA+TGG + Chr8:6950280-6950299 MsG0880042309.01.T01:intron 45.0%
TTATGGCTCACATGAGCAAG+AGG - Chr8:6951421-6951440 None:intergenic 45.0%
TTCCTAAGACCAGTACACTC+TGG - Chr8:6951261-6951280 None:intergenic 45.0%
TTCGGGTGAAATATAGAGGC+AGG + Chr8:6950304-6950323 MsG0880042309.01.T01:intron 45.0%
TTGCCCTATCCAAGGCATAT+TGG - Chr8:6951297-6951316 None:intergenic 45.0%
TTGTAGACAATGGGGGAAGA+TGG + Chr8:6954195-6954214 MsG0880042309.01.T01:CDS 45.0%
TTTACAGGCTGGTACTACAG+TGG + Chr8:6953177-6953196 MsG0880042309.01.T01:intron 45.0%
TTTGACAACATTGGGCCACA+TGG - Chr8:6949351-6949370 None:intergenic 45.0%
! AAGGGAAAGTGCACACGATA+AGG - Chr8:6948715-6948734 None:intergenic 45.0%
! AGGGAAAGTGCACACGATAA+GGG - Chr8:6948714-6948733 None:intergenic 45.0%
! ATCCTGCTGCTTGTAGACAA+TGG + Chr8:6954185-6954204 MsG0880042309.01.T01:CDS 45.0%
! GAAGCATCAGTGTGTCTACT+CGG + Chr8:6948889-6948908 MsG0880042309.01.T01:CDS 45.0%
! GGATATCGGTGGTGAGTTTT+TGG + Chr8:6949386-6949405 MsG0880042309.01.T01:intron 45.0%
! TACATCAGTCTTGTCCATGC+TGG - Chr8:6949499-6949518 None:intergenic 45.0%
! TCCTGCTGCTTGTAGACAAT+GGG + Chr8:6954186-6954205 MsG0880042309.01.T01:CDS 45.0%
! TCGCCTTTTGACATTGTCTG+AGG + Chr8:6954395-6954414 MsG0880042309.01.T01:three_prime_UTR 45.0%
!! CCATAGAGTGAGTGTTGGAA+AGG - Chr8:6950624-6950643 None:intergenic 45.0%
!! GCTAGAAAAGAGGTATTGGG+TGG - Chr8:6951322-6951341 None:intergenic 45.0%
!! GTACTGGTCTTAGGAACAGA+TGG + Chr8:6951265-6951284 MsG0880042309.01.T01:intron 45.0%
!!! CTTTATTTTTTGGCAGGCCG+AGG + Chr8:6952108-6952127 MsG0880042309.01.T01:intron 45.0%
!!! GCAATCACTTTTGACTTCGG+TGG - Chr8:6952458-6952477 None:intergenic 45.0%
!!! TTAGCTGGTCTTTTGACTGC+AGG - Chr8:6952515-6952534 None:intergenic 45.0%
AACAGGGCCCACTGATCTAA+TGG + Chr8:6950679-6950698 MsG0880042309.01.T01:intron 50.0%
AAGCCGCTACGATTGAGGTA+GGG + Chr8:6949567-6949586 MsG0880042309.01.T01:intron 50.0%
ACAGGGCCCACTGATCTAAT+GGG + Chr8:6950680-6950699 MsG0880042309.01.T01:intron 50.0%
ACGGGTCCCATTAGATCAGT+GGG - Chr8:6950689-6950708 None:intergenic 50.0%
AGAGAGAGAGAAGGGATGGA+AGG - Chr8:6948516-6948535 None:intergenic 50.0%
AGAGAGAGAGAGAGAAGGGA+TGG - Chr8:6948520-6948539 None:intergenic 50.0%
AGAGTTCTACTCCAAGCACC+CGG + Chr8:6952378-6952397 MsG0880042309.01.T01:CDS 50.0%
AGCTAACCCAGCTCCCAAAA+AGG + Chr8:6952529-6952548 MsG0880042309.01.T01:CDS 50.0%
ATGGCTCACATGAGCAAGAG+GGG - Chr8:6951419-6951438 None:intergenic 50.0%
CAATCCATACTAGTGGTCCG+GGG - Chr8:6952188-6952207 None:intergenic 50.0%
CACCAACACTCTTACTGCTC+GGG - Chr8:6952484-6952503 None:intergenic 50.0%
CATCCCTACCTCAATCGTAG+CGG - Chr8:6949573-6949592 None:intergenic 50.0%
CCAACACTCACTCTATGGTC+GGG + Chr8:6950626-6950645 MsG0880042309.01.T01:intron 50.0%
CCATAATCCAATATGGCGGC+CGG + Chr8:6949453-6949472 MsG0880042309.01.T01:intron 50.0%
CGACCCCACTTAGTGGAATA+AGG + Chr8:6949521-6949540 MsG0880042309.01.T01:intron 50.0%
CTACGATTGAGGTAGGGATG+AGG + Chr8:6949573-6949592 MsG0880042309.01.T01:intron 50.0%
CTGACCCTGTTGTTAAGCGT+TGG - Chr8:6950102-6950121 None:intergenic 50.0%
CTGCCCAATATGCCTTGGAT+AGG + Chr8:6951290-6951309 MsG0880042309.01.T01:intron 50.0%
CTTCAACCTGCAACTCGAAG+TGG + Chr8:6952353-6952372 MsG0880042309.01.T01:CDS 50.0%
GAAGATGTATGCTGATCGGG+TGG + Chr8:6948827-6948846 MsG0880042309.01.T01:exon 50.0%
GAGAGAAGGGATGGAAGGTT+AGG - Chr8:6948511-6948530 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+AGG - Chr8:6948525-6948544 None:intergenic 50.0%
GATGGAAGGTTAGGAAAGCC+CGG - Chr8:6948502-6948521 None:intergenic 50.0%
GCACCAACACTCTTACTGCT+CGG - Chr8:6952485-6952504 None:intergenic 50.0%
GGACCTGGATAAATAGAGGG+TGG + Chr8:6950325-6950344 MsG0880042309.01.T01:intron 50.0%
GGCAGGACCTGGATAAATAG+AGG + Chr8:6950321-6950340 MsG0880042309.01.T01:intron 50.0%
GGGTGACAAAAAGAGAAGGG+AGG - Chr8:6951350-6951369 None:intergenic 50.0%
TAACCATTAGTGAGGGGCCA+AGG + Chr8:6949745-6949764 MsG0880042309.01.T01:intron 50.0%
TAAGCCGCTACGATTGAGGT+AGG + Chr8:6949566-6949585 MsG0880042309.01.T01:intron 50.0%
TATGCTGATCGGGTGGAAAG+TGG + Chr8:6948834-6948853 MsG0880042309.01.T01:CDS 50.0%
TCGGCCGAAATTGACAATGC+TGG - Chr8:6949416-6949435 None:intergenic 50.0%
TGCCCTCCAGAATCAGATTG+AGG + Chr8:6950793-6950812 MsG0880042309.01.T01:intron 50.0%
TGGTTAAGCCGCTACGATTG+AGG + Chr8:6949562-6949581 MsG0880042309.01.T01:intron 50.0%
TGTGCAATGACGAGCTGACA+TGG + Chr8:6951549-6951568 MsG0880042309.01.T01:intron 50.0%
TTACGACTCCCAGAGTGTAC+TGG + Chr8:6951249-6951268 MsG0880042309.01.T01:intron 50.0%
! AAACAGGCACTGTACCTCAG+CGG - Chr8:6950026-6950045 None:intergenic 50.0%
! ACTGTTGATGGGGAAGGGAT+AGG + Chr8:6950223-6950242 MsG0880042309.01.T01:intron 50.0%
! AGAAGGACTAGGGGCACATT+TGG + Chr8:6950402-6950421 MsG0880042309.01.T01:intron 50.0%
! AGCTGTACTGTTGATGGGGA+AGG + Chr8:6950217-6950236 MsG0880042309.01.T01:intron 50.0%
! CCTGCTGCTTGTAGACAATG+GGG + Chr8:6954187-6954206 MsG0880042309.01.T01:CDS 50.0%
! CTGCTGCTTGTAGACAATGG+GGG + Chr8:6954188-6954207 MsG0880042309.01.T01:CDS 50.0%
! GAAGGACTAGGGGCACATTT+GGG + Chr8:6950403-6950422 MsG0880042309.01.T01:intron 50.0%
! GCTGTACTGTTGATGGGGAA+GGG + Chr8:6950218-6950237 MsG0880042309.01.T01:intron 50.0%
! GGGGTGGGAGGTATAATGTT+GGG + Chr8:6950176-6950195 MsG0880042309.01.T01:intron 50.0%
! GGGTGGGAGGTATAATGTTG+GGG + Chr8:6950177-6950196 MsG0880042309.01.T01:intron 50.0%
! GGTGAGGAAGAAGATGGGTT+CGG + Chr8:6950286-6950305 MsG0880042309.01.T01:intron 50.0%
! GTGAGGAAGAAGATGGGTTC+GGG + Chr8:6950287-6950306 MsG0880042309.01.T01:intron 50.0%
! TTACACTGCATTGAGGGTGC+AGG + Chr8:6951831-6951850 MsG0880042309.01.T01:intron 50.0%
! TTCGGTGGGTCGGAGTTTTT+AGG - Chr8:6952443-6952462 None:intergenic 50.0%
!! CAGTAAGAGTGTTGGTGCTG+AGG + Chr8:6952487-6952506 MsG0880042309.01.T01:CDS 50.0%
!! CTCTTTCCACTTCGAGTTGC+AGG - Chr8:6952362-6952381 None:intergenic 50.0%
!! GGCCCTGTTACCGGTTTAAA+GGG - Chr8:6950668-6950687 None:intergenic 50.0%
!! TCCCAGAGTGTACTGGTCTT+AGG + Chr8:6951256-6951275 MsG0880042309.01.T01:intron 50.0%
!! TCTGTCAAAGAGCGTCTGGA+TGG + Chr8:6948867-6948886 MsG0880042309.01.T01:CDS 50.0%
!!! AGGATTTTGGCTCTCCAGCA+TGG + Chr8:6949482-6949501 MsG0880042309.01.T01:intron 50.0%
!!! CACTTTTGACTTCGGTGGGT+CGG - Chr8:6952453-6952472 None:intergenic 50.0%
!!! TTTTTGGGAGCTGGGTTAGC+TGG - Chr8:6952530-6952549 None:intergenic 50.0%
AATATGGCGGCCGGTATGGA+AGG + Chr8:6949462-6949481 MsG0880042309.01.T01:intron 55.0%
ACAACCCCGGACCACTAGTA+TGG + Chr8:6952181-6952200 MsG0880042309.01.T01:intron 55.0%
ACATTATACCTCCCACCCCC+AGG - Chr8:6950175-6950194 None:intergenic 55.0%
ACCCAGCTCCCAAAAAGGCA+CGG + Chr8:6952534-6952553 MsG0880042309.01.T01:CDS 55.0%
AGATCAGTGGGCCCTGTTAC+CGG - Chr8:6950677-6950696 None:intergenic 55.0%
AGCAAGAGGGGTGAGGTTGA+AGG - Chr8:6951407-6951426 None:intergenic 55.0%
ATCCAATATGGCGGCCGGTA+TGG + Chr8:6949458-6949477 MsG0880042309.01.T01:intron 55.0%
ATCGGGTGGAAAGTGGAGCA+AGG + Chr8:6948841-6948860 MsG0880042309.01.T01:CDS 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr8:6949514-6949533 MsG0880042309.01.T01:intron 55.0%
CACGGGTCCCATTAGATCAG+TGG - Chr8:6950690-6950709 None:intergenic 55.0%
CCCCATTGTCTACAAGCAGC+AGG - Chr8:6954190-6954209 None:intergenic 55.0%
CCCGACCATAGAGTGAGTGT+TGG - Chr8:6950629-6950648 None:intergenic 55.0%
CCGGCCGCCATATTGGATTA+TGG - Chr8:6949456-6949475 None:intergenic 55.0%
GAGTTCTACTCCAAGCACCC+GGG + Chr8:6952379-6952398 MsG0880042309.01.T01:CDS 55.0%
GCAAGAGGGGTGAGGTTGAA+GGG - Chr8:6951406-6951425 None:intergenic 55.0%
GTGGAAGTGGAACTCGACGA+GGG + Chr8:6950344-6950363 MsG0880042309.01.T01:intron 55.0%
TCACATGAGCAAGAGGGGTG+AGG - Chr8:6951414-6951433 None:intergenic 55.0%
TCACCTTGGCCCCTCACTAA+TGG - Chr8:6949751-6949770 None:intergenic 55.0%
TCCCACTTGTCGTCTTGCCT+CGG - Chr8:6952128-6952147 None:intergenic 55.0%
TGGCACTGCCCAATATGCCT+TGG + Chr8:6951285-6951304 MsG0880042309.01.T01:intron 55.0%
TTCCATACCGGCCGCCATAT+TGG - Chr8:6949463-6949482 None:intergenic 55.0%
! AGCTCCCAAAAAGGCACGGA+AGG + Chr8:6952538-6952557 MsG0880042309.01.T01:CDS 55.0%
! CGGCCGGTATGGAAGGATTT+TGG + Chr8:6949469-6949488 MsG0880042309.01.T01:intron 55.0%
! GGGGGTGGGAGGTATAATGT+TGG + Chr8:6950175-6950194 MsG0880042309.01.T01:intron 55.0%
! GGGTGGATTTGCCCTATCCA+AGG - Chr8:6951305-6951324 None:intergenic 55.0%
!! GAGGTCTGTCAAAGAGCGTC+TGG + Chr8:6948863-6948882 MsG0880042309.01.T01:CDS 55.0%
!! GGGCCCTGTTACCGGTTTAA+AGG - Chr8:6950669-6950688 None:intergenic 55.0%
!! TCCGTGCCTTTTTGGGAGCT+GGG - Chr8:6952538-6952557 None:intergenic 55.0%
!! TTCCGTGCCTTTTTGGGAGC+TGG - Chr8:6952539-6952558 None:intergenic 55.0%
AGCTAGCTAGACCTGGGGGT+GGG + Chr8:6950161-6950180 MsG0880042309.01.T01:intron 60.0%
CACTGTACCTCAGCGGACAG+CGG - Chr8:6950019-6950038 None:intergenic 60.0%
GCCGAGGCAAGACGACAAGT+GGG + Chr8:6952124-6952143 MsG0880042309.01.T01:CDS 60.0%
GGCGTCATGGAGGATATCGG+TGG + Chr8:6949375-6949394 MsG0880042309.01.T01:intron 60.0%
GGGTGGAAAGTGGAGCAAGG+AGG + Chr8:6948844-6948863 MsG0880042309.01.T01:CDS 60.0%
GGTGGAAGTGGAACTCGACG+AGG + Chr8:6950343-6950362 MsG0880042309.01.T01:intron 60.0%
TAGCTAGCTAGACCTGGGGG+TGG + Chr8:6950160-6950179 MsG0880042309.01.T01:intron 60.0%
TCACGAAGATCCCGGGTGCT+TGG - Chr8:6952392-6952411 None:intergenic 60.0%
TCAGAAACTCCGGCCACGAC+AGG - Chr8:6953913-6953932 None:intergenic 60.0%
! CTTTGGGTTCCTGTCGTGGC+CGG + Chr8:6953901-6953920 MsG0880042309.01.T01:intron 60.0%
!! CGAGCTTTGGGTTCCTGTCG+TGG + Chr8:6953897-6953916 MsG0880042309.01.T01:intron 60.0%
GGCCGAGGCAAGACGACAAG+TGG + Chr8:6952123-6952142 MsG0880042309.01.T01:intron 65.0%
TACCTCAGCGGACAGCGGCT+AGG - Chr8:6950014-6950033 None:intergenic 65.0%
TAGCTAGACCTGGGGGTGGG+AGG + Chr8:6950164-6950183 MsG0880042309.01.T01:intron 65.0%
TTCCTAGCCGCTGTCCGCTG+AGG + Chr8:6950009-6950028 MsG0880042309.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 6948482 6954443 6948482 ID=MsG0880042309.01;Name=MsG0880042309.01
Chr8 mRNA 6948482 6954443 6948482 ID=MsG0880042309.01.T01;Parent=MsG0880042309.01;Name=MsG0880042309.01.T01;_AED=0.40;_eAED=0.40;_QI=349|0.8|0.83|1|1|1|6|187|238
Chr8 exon 6948482 6948937 6948482 ID=MsG0880042309.01.T01:exon:1858;Parent=MsG0880042309.01.T01
Chr8 exon 6952124 6952197 6952124 ID=MsG0880042309.01.T01:exon:1859;Parent=MsG0880042309.01.T01
Chr8 exon 6952303 6952559 6952303 ID=MsG0880042309.01.T01:exon:1860;Parent=MsG0880042309.01.T01
Chr8 exon 6953184 6953258 6953184 ID=MsG0880042309.01.T01:exon:1861;Parent=MsG0880042309.01.T01
Chr8 exon 6953428 6953479 6953428 ID=MsG0880042309.01.T01:exon:1862;Parent=MsG0880042309.01.T01
Chr8 exon 6954105 6954443 6954105 ID=MsG0880042309.01.T01:exon:1863;Parent=MsG0880042309.01.T01
Chr8 five_prime_UTR 6948482 6948830 6948482 ID=MsG0880042309.01.T01:five_prime_utr;Parent=MsG0880042309.01.T01
Chr8 CDS 6948831 6948937 6948831 ID=MsG0880042309.01.T01:cds;Parent=MsG0880042309.01.T01
Chr8 CDS 6952124 6952197 6952124 ID=MsG0880042309.01.T01:cds;Parent=MsG0880042309.01.T01
Chr8 CDS 6952303 6952559 6952303 ID=MsG0880042309.01.T01:cds;Parent=MsG0880042309.01.T01
Chr8 CDS 6953184 6953258 6953184 ID=MsG0880042309.01.T01:cds;Parent=MsG0880042309.01.T01
Chr8 CDS 6953428 6953479 6953428 ID=MsG0880042309.01.T01:cds;Parent=MsG0880042309.01.T01
Chr8 CDS 6954105 6954256 6954105 ID=MsG0880042309.01.T01:cds;Parent=MsG0880042309.01.T01
Chr8 three_prime_UTR 6954257 6954443 6954257 ID=MsG0880042309.01.T01:three_prime_utr;Parent=MsG0880042309.01.T01
Gene Sequence

>MsG0880042309.01.T01

ATGTATGCTGATCGGGTGGAAAGTGGAGCAAGGAGGTCTGTCAAAGAGCGTCTGGATGGAAGCATCAGTGTGTCTACTCGGAATCAACGTCAAGTTACTGGCAAAAGGCCGAGGCAAGACGACAAGTGGGAACACGATCTTTATGATGATGATGTTGAACAAGAACAACCCCGGACCACTAATCGCAAAGTTACTGGTCAAGATCTCCGTCTTAAGCTTCAAAAGAAAGGTCTTCAACCTGCAACTCGAAGTGGAAAGAGTTCTACTCCAAGCACCCGGGATCTTCGTGAAAGACTATCAGGGACAATGAACACACAACCTAAAAACTCCGACCCACCGAAGTCAAAAGTGATTGCTAAACCGAGCAGTAAGAGTGTTGGTGCTGAGGCTCCTGCAGTCAAAAGACCAGCTAACCCAGCTCCCAAAAAGGCACGGAAGGCTGGTACTACAGTGGATGAATTTTTGCTGACCTTGGGTCTTGAAAAGTATCTCATAACTTTTCAGGCTGAAGAAGTTGATATGACAGCTCTCAAACATATGACTGATGAGGACCTCAAGGTTATCGGGGCCAAGAAAGAAGATACTTTTAGCATTGGAGTCAAAAGTCTGACAACTTATGTTGGAGTTGATGTTGTTAGCTGGATGATCCTGCTGCTTGTAGACAATGGGGGAAGATGGATTAACATCTCAAAACTAAGTGTAATAGCATGTCTCTGA
Protein sequence

>MsG0880042309.01.T01

MYADRVESGARRSVKERLDGSISVSTRNQRQVTGKRPRQDDKWEHDLYDDDVEQEQPRTTNRKVTGQDLRLKLQKKGLQPATRSGKSSTPSTRDLRERLSGTMNTQPKNSDPPKSKVIAKPSSKSVGAEAPAVKRPANPAPKKARKAGTTVDEFLLTLGLEKYLITFQAEEVDMTALKHMTDEDLKVIGAKKEDTFSIGVKSLTTYVGVDVVSWMILLLVDNGGRWINISKLSVIACL*