Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035054.01.T01 | AES73097.1 | 79.817 | 109 | 22 | 0 | 1 | 109 | 13 | 121 | 1.09E-56 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035054.01.T01 | Q41001 | 74.312 | 109 | 27 | 1 | 2 | 109 | 15 | 123 | 2.56E-53 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035054.01.T01 | G7J4G1 | 79.817 | 109 | 22 | 0 | 1 | 109 | 13 | 121 | 5.19e-57 | 184 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0680031473.01 | MsG0680035054.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035054.01.T01 | MTR_3g099580 | 79.817 | 109 | 22 | 0 | 1 | 109 | 13 | 121 | 1.32e-60 | 184 |
| MsG0680035054.01.T01 | MTR_3g099570 | 74.312 | 109 | 28 | 0 | 1 | 109 | 13 | 121 | 2.97e-56 | 172 |
| MsG0680035054.01.T01 | MTR_3g099680 | 72.072 | 111 | 29 | 2 | 1 | 109 | 13 | 123 | 1.12e-51 | 162 |
| MsG0680035054.01.T01 | MTR_3g099980 | 72.072 | 111 | 29 | 2 | 1 | 109 | 13 | 123 | 5.77e-51 | 160 |
| MsG0680035054.01.T01 | MTR_3g099540 | 58.182 | 110 | 46 | 0 | 1 | 110 | 14 | 123 | 2.40e-41 | 133 |
| MsG0680035054.01.T01 | MTR_8g007035 | 52.830 | 106 | 47 | 2 | 6 | 108 | 15 | 120 | 5.66e-33 | 114 |
| MsG0680035054.01.T01 | MTR_8g007020 | 54.455 | 101 | 44 | 1 | 10 | 108 | 20 | 120 | 7.04e-33 | 113 |
| MsG0680035054.01.T01 | MTR_4g114870 | 48.000 | 100 | 47 | 2 | 14 | 108 | 191 | 290 | 3.47e-25 | 97.4 |
| MsG0680035054.01.T01 | MTR_4g114870 | 49.020 | 102 | 47 | 2 | 12 | 108 | 27 | 128 | 1.26e-24 | 95.9 |
| MsG0680035054.01.T01 | MTR_1g090190 | 41.414 | 99 | 58 | 0 | 11 | 109 | 20 | 118 | 4.20e-25 | 93.6 |
| MsG0680035054.01.T01 | MTR_2g088990 | 43.878 | 98 | 54 | 1 | 10 | 106 | 21 | 118 | 9.68e-24 | 91.3 |
| MsG0680035054.01.T01 | MTR_6g080660 | 41.237 | 97 | 57 | 0 | 14 | 110 | 28 | 124 | 5.38e-23 | 89.0 |
| MsG0680035054.01.T01 | MTR_5g006040 | 44.554 | 101 | 53 | 3 | 11 | 108 | 23 | 123 | 4.52e-22 | 85.9 |
| MsG0680035054.01.T01 | MTR_0334s0010 | 41.509 | 106 | 57 | 3 | 9 | 110 | 23 | 127 | 4.96e-22 | 86.3 |
| MsG0680035054.01.T01 | MTR_1g104800 | 41.748 | 103 | 57 | 3 | 9 | 108 | 20 | 122 | 1.28e-21 | 84.7 |
| MsG0680035054.01.T01 | MTR_6g023760 | 41.000 | 100 | 58 | 1 | 10 | 108 | 22 | 121 | 1.80e-21 | 84.3 |
| MsG0680035054.01.T01 | MTR_8g099220 | 40.777 | 103 | 57 | 2 | 11 | 109 | 26 | 128 | 3.84e-21 | 82.0 |
| MsG0680035054.01.T01 | MTR_1g112700 | 38.235 | 102 | 61 | 2 | 11 | 110 | 30 | 131 | 1.14e-19 | 79.7 |
| MsG0680035054.01.T01 | MTR_7g086140 | 42.574 | 101 | 56 | 2 | 10 | 108 | 22 | 122 | 7.47e-19 | 77.0 |
| MsG0680035054.01.T01 | MTR_7g086190 | 42.574 | 101 | 56 | 2 | 10 | 108 | 22 | 122 | 7.47e-19 | 77.0 |
| MsG0680035054.01.T01 | MTR_1g105130 | 40.206 | 97 | 56 | 2 | 14 | 108 | 25 | 121 | 8.36e-19 | 76.6 |
| MsG0680035054.01.T01 | MTR_1g105120 | 40.206 | 97 | 56 | 2 | 14 | 108 | 25 | 121 | 8.36e-19 | 76.6 |
| MsG0680035054.01.T01 | MTR_6g083240 | 43.810 | 105 | 52 | 3 | 11 | 108 | 24 | 128 | 1.59e-18 | 76.6 |
| MsG0680035054.01.T01 | MTR_2g043730 | 38.889 | 108 | 61 | 4 | 1 | 107 | 20 | 123 | 3.22e-18 | 74.3 |
| MsG0680035054.01.T01 | MTR_7g086160 | 38.182 | 110 | 66 | 2 | 1 | 108 | 14 | 123 | 8.57e-18 | 74.3 |
| MsG0680035054.01.T01 | MTR_3g089035 | 43.299 | 97 | 51 | 3 | 11 | 106 | 30 | 123 | 9.94e-17 | 70.5 |
| MsG0680035054.01.T01 | MTR_4g067200 | 35.577 | 104 | 60 | 3 | 14 | 110 | 28 | 131 | 2.94e-16 | 70.5 |
| MsG0680035054.01.T01 | MTR_4g066110 | 35.577 | 104 | 60 | 3 | 14 | 110 | 28 | 131 | 2.94e-16 | 70.5 |
| MsG0680035054.01.T01 | MTR_2g025580 | 34.545 | 110 | 70 | 2 | 2 | 109 | 15 | 124 | 3.57e-16 | 70.1 |
| MsG0680035054.01.T01 | MTR_7g086220 | 38.144 | 97 | 58 | 2 | 14 | 108 | 25 | 121 | 4.82e-16 | 69.7 |
| MsG0680035054.01.T01 | MTR_4g081100 | 38.235 | 102 | 58 | 2 | 16 | 112 | 34 | 135 | 1.76e-15 | 69.3 |
| MsG0680035054.01.T01 | MTR_2g083250 | 37.500 | 104 | 58 | 2 | 16 | 112 | 28 | 131 | 3.16e-15 | 69.3 |
| MsG0680035054.01.T01 | MTR_6g022170 | 35.922 | 103 | 60 | 2 | 11 | 108 | 31 | 132 | 5.30e-15 | 67.0 |
| MsG0680035054.01.T01 | MTR_7g086100 | 39.362 | 94 | 56 | 1 | 16 | 108 | 28 | 121 | 1.28e-14 | 67.4 |
| MsG0680035054.01.T01 | MTR_7g086090 | 38.947 | 95 | 57 | 1 | 16 | 109 | 28 | 122 | 2.41e-14 | 66.6 |
| MsG0680035054.01.T01 | MTR_8g088830 | 37.500 | 104 | 60 | 4 | 5 | 106 | 19 | 119 | 3.64e-14 | 63.9 |
| MsG0680035054.01.T01 | MTR_2g043790 | 40.000 | 100 | 56 | 3 | 9 | 107 | 2 | 98 | 3.96e-14 | 63.2 |
| MsG0680035054.01.T01 | MTR_8g463180 | 38.000 | 100 | 59 | 2 | 16 | 112 | 26 | 125 | 5.43e-14 | 66.2 |
| MsG0680035054.01.T01 | MTR_4g007250 | 35.922 | 103 | 64 | 2 | 8 | 109 | 23 | 124 | 1.04e-13 | 63.9 |
| MsG0680035054.01.T01 | MTR_8g089110 | 38.776 | 98 | 56 | 3 | 11 | 107 | 25 | 119 | 1.71e-13 | 62.0 |
| MsG0680035054.01.T01 | MTR_7g086230 | 37.895 | 95 | 58 | 1 | 16 | 109 | 28 | 122 | 2.05e-13 | 63.2 |
| MsG0680035054.01.T01 | MTR_7g086280 | 37.895 | 95 | 58 | 1 | 16 | 109 | 28 | 122 | 2.18e-13 | 63.2 |
| MsG0680035054.01.T01 | MTR_4g077787 | 32.432 | 111 | 68 | 2 | 4 | 108 | 22 | 131 | 2.34e-13 | 63.2 |
| MsG0680035054.01.T01 | MTR_3g089005 | 39.216 | 102 | 58 | 3 | 6 | 106 | 25 | 123 | 3.04e-13 | 61.6 |
| MsG0680035054.01.T01 | MTR_4g111640 | 33.010 | 103 | 62 | 2 | 12 | 108 | 30 | 131 | 3.82e-13 | 62.4 |
| MsG0680035054.01.T01 | MTR_2g101300 | 34.286 | 105 | 63 | 2 | 11 | 110 | 24 | 127 | 6.50e-13 | 62.0 |
| MsG0680035054.01.T01 | MTR_2g090575 | 37.500 | 96 | 57 | 2 | 16 | 108 | 27 | 122 | 6.79e-13 | 63.5 |
| MsG0680035054.01.T01 | MTR_1g090420 | 32.479 | 117 | 70 | 3 | 1 | 108 | 10 | 126 | 8.46e-13 | 62.4 |
| MsG0680035054.01.T01 | MTR_1g014120 | 33.663 | 101 | 62 | 2 | 17 | 112 | 29 | 129 | 2.61e-12 | 60.5 |
| MsG0680035054.01.T01 | MTR_4g112310 | 35.802 | 81 | 51 | 1 | 28 | 108 | 2 | 81 | 2.76e-12 | 59.3 |
| MsG0680035054.01.T01 | MTR_4g124280 | 34.906 | 106 | 64 | 2 | 10 | 110 | 21 | 126 | 3.47e-12 | 60.8 |
| MsG0680035054.01.T01 | MTR_4g130780 | 35.714 | 84 | 53 | 1 | 28 | 110 | 48 | 131 | 3.97e-12 | 60.1 |
| MsG0680035054.01.T01 | MTR_4g078410 | 35.000 | 100 | 62 | 2 | 16 | 112 | 27 | 126 | 4.60e-12 | 59.7 |
| MsG0680035054.01.T01 | MTR_8g086360 | 35.000 | 100 | 62 | 2 | 16 | 112 | 26 | 125 | 9.42e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035054.01.T01 | AT1G72230 | 53.465 | 101 | 47 | 0 | 10 | 110 | 19 | 119 | 1.78e-37 | 125 |
| MsG0680035054.01.T01 | AT1G22480 | 57.609 | 92 | 39 | 0 | 19 | 110 | 24 | 115 | 4.37e-33 | 114 |
| MsG0680035054.01.T01 | AT3G60270 | 46.465 | 99 | 53 | 0 | 10 | 108 | 22 | 120 | 3.02e-27 | 99.4 |
| MsG0680035054.01.T01 | AT2G32300 | 42.574 | 101 | 57 | 1 | 9 | 108 | 21 | 121 | 3.07e-25 | 95.9 |
| MsG0680035054.01.T01 | AT2G32300 | 42.574 | 101 | 57 | 1 | 9 | 108 | 51 | 151 | 6.05e-25 | 95.5 |
| MsG0680035054.01.T01 | AT2G26720 | 46.000 | 100 | 52 | 2 | 11 | 108 | 26 | 125 | 1.35e-24 | 92.8 |
| MsG0680035054.01.T01 | AT5G07475 | 42.424 | 99 | 57 | 0 | 11 | 109 | 27 | 125 | 7.77e-24 | 90.5 |
| MsG0680035054.01.T01 | AT5G26330 | 46.535 | 101 | 51 | 2 | 11 | 108 | 21 | 121 | 2.66e-23 | 89.0 |
| MsG0680035054.01.T01 | AT3G27200 | 38.393 | 112 | 65 | 2 | 1 | 108 | 10 | 121 | 1.37e-22 | 87.0 |
| MsG0680035054.01.T01 | AT2G44790 | 47.826 | 92 | 46 | 1 | 19 | 108 | 33 | 124 | 1.78e-22 | 87.4 |
| MsG0680035054.01.T01 | AT2G31050 | 45.000 | 100 | 53 | 2 | 11 | 108 | 26 | 125 | 4.42e-22 | 86.3 |
| MsG0680035054.01.T01 | AT3G60280 | 40.404 | 99 | 59 | 0 | 10 | 108 | 20 | 118 | 6.97e-20 | 81.3 |
| MsG0680035054.01.T01 | AT3G17675 | 37.037 | 108 | 67 | 1 | 2 | 108 | 20 | 127 | 1.76e-18 | 75.1 |
| MsG0680035054.01.T01 | AT3G18590 | 35.577 | 104 | 60 | 2 | 11 | 108 | 24 | 126 | 1.89e-14 | 66.2 |
| MsG0680035054.01.T01 | AT1G64640 | 36.190 | 105 | 63 | 2 | 11 | 111 | 30 | 134 | 2.03e-14 | 66.2 |
| MsG0680035054.01.T01 | AT5G20230 | 40.206 | 97 | 54 | 2 | 16 | 108 | 27 | 123 | 9.43e-14 | 64.3 |
| MsG0680035054.01.T01 | AT2G25060 | 33.333 | 117 | 73 | 2 | 1 | 112 | 19 | 135 | 2.05e-13 | 63.5 |
| MsG0680035054.01.T01 | AT5G53870 | 31.624 | 117 | 69 | 2 | 7 | 112 | 15 | 131 | 3.28e-13 | 64.7 |
| MsG0680035054.01.T01 | AT5G53870 | 31.624 | 117 | 69 | 2 | 7 | 112 | 15 | 131 | 3.51e-13 | 64.3 |
| MsG0680035054.01.T01 | AT4G28365 | 34.694 | 98 | 61 | 2 | 16 | 110 | 31 | 128 | 3.78e-13 | 62.8 |
| MsG0680035054.01.T01 | AT5G57920 | 38.554 | 83 | 50 | 1 | 29 | 110 | 43 | 125 | 4.24e-13 | 62.4 |
| MsG0680035054.01.T01 | AT5G57920 | 38.554 | 83 | 50 | 1 | 29 | 110 | 42 | 124 | 5.49e-13 | 62.4 |
| MsG0680035054.01.T01 | AT5G57920 | 38.554 | 83 | 50 | 1 | 29 | 110 | 75 | 157 | 6.54e-13 | 62.4 |
| MsG0680035054.01.T01 | AT1G45063 | 36.000 | 100 | 60 | 3 | 13 | 108 | 148 | 247 | 8.40e-13 | 62.8 |
| MsG0680035054.01.T01 | AT3G20570 | 36.449 | 107 | 64 | 2 | 10 | 112 | 26 | 132 | 9.23e-13 | 62.0 |
| MsG0680035054.01.T01 | AT4G30590 | 34.118 | 85 | 55 | 1 | 29 | 112 | 48 | 132 | 1.00e-12 | 61.6 |
| MsG0680035054.01.T01 | AT1G45063 | 36.000 | 100 | 60 | 3 | 13 | 108 | 148 | 247 | 1.19e-12 | 63.2 |
| MsG0680035054.01.T01 | AT4G12880 | 34.314 | 102 | 63 | 3 | 11 | 109 | 26 | 126 | 4.12e-12 | 58.9 |
| MsG0680035054.01.T01 | AT2G02850 | 38.384 | 99 | 53 | 4 | 11 | 106 | 33 | 126 | 8.82e-12 | 58.2 |
| MsG0680035054.01.T01 | AT1G48940 | 34.694 | 98 | 57 | 2 | 17 | 108 | 29 | 125 | 2.60e-11 | 57.8 |
| MsG0680035054.01.T01 | AT4G32490 | 31.633 | 98 | 64 | 2 | 16 | 110 | 33 | 130 | 3.18e-11 | 58.2 |
| MsG0680035054.01.T01 | AT4G31840 | 32.692 | 104 | 64 | 3 | 15 | 112 | 28 | 131 | 6.96e-11 | 56.6 |
Find 22 sgRNAs with CRISPR-Local
Find 31 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACACCGTTGGGGATACTTT+AGG | 0.298621 | 6:-98245051 | MsG0680035054.01.T01:CDS |
| TGCCATGAAACTCTCTATTA+AGG | 0.330487 | 6:-98244647 | MsG0680035054.01.T01:CDS |
| TACTTCATATGTGCTGTTCC+TGG | 0.337108 | 6:-98244682 | MsG0680035054.01.T01:CDS |
| TTGCAACTGTCCACACCGTT+GGG | 0.359738 | 6:-98245062 | MsG0680035054.01.T01:CDS |
| AACCTTAATAGAGAGTTTCA+TGG | 0.393486 | 6:+98244645 | None:intergenic |
| ACTATGACAGTGTTCAACTA+TGG | 0.394246 | 6:-98244826 | MsG0680035054.01.T01:intron |
| AGTGATAAAACCTTTGCAAT+TGG | 0.406507 | 6:-98244994 | MsG0680035054.01.T01:CDS |
| TTTGCAACTGTCCACACCGT+TGG | 0.482096 | 6:-98245063 | MsG0680035054.01.T01:CDS |
| GATACTTTAGGTTGGACAAT+CGG | 0.484942 | 6:-98245039 | MsG0680035054.01.T01:CDS |
| CAGTGTTCAACTATGGAGTC+GGG | 0.538761 | 6:-98244819 | MsG0680035054.01.T01:CDS |
| TCGGTTCTGATTATAACGCA+TGG | 0.542470 | 6:-98245020 | MsG0680035054.01.T01:CDS |
| ATGGCAGCTATGCAATGTCC+AGG | 0.547973 | 6:+98244664 | None:intergenic |
| GTGTGGACAGTTGCAAAAGT+TGG | 0.551081 | 6:+98245069 | None:intergenic |
| ACAGTGTTCAACTATGGAGT+CGG | 0.577018 | 6:-98244820 | MsG0680035054.01.T01:intron |
| CCGTTGGGGATACTTTAGGT+TGG | 0.582085 | 6:-98245047 | MsG0680035054.01.T01:CDS |
| CGGTTCTGATTATAACGCAT+GGG | 0.582902 | 6:-98245019 | MsG0680035054.01.T01:CDS |
| TGCAACTGTCCACACCGTTG+GGG | 0.596271 | 6:-98245061 | MsG0680035054.01.T01:CDS |
| GAGACTGTCACCAATTGCAA+AGG | 0.621682 | 6:+98244984 | None:intergenic |
| CTAAAGTATCCCCAACGGTG+TGG | 0.668084 | 6:+98245052 | None:intergenic |
| CCAACCTAAAGTATCCCCAA+CGG | 0.709587 | 6:+98245047 | None:intergenic |
| TCAATTAGTACAGACAGTAG+CGG | 0.713968 | 6:-98244742 | MsG0680035054.01.T01:CDS |
| CTATGGAGTCGGGCACACAG+TGG | 0.746435 | 6:-98244809 | MsG0680035054.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATTTATAGTTCATACTTA+CGG | + | Chr6:98244761-98244780 | None:intergenic | 20.0% |
| !!! | TGCATTAGTTTTGTAAATTA+TGG | + | Chr6:98244865-98244884 | None:intergenic | 20.0% |
| !! | CTATTAAGGTTAAGAGTTTT+AGG | - | Chr6:98245087-98245106 | MsG0680035054.01.T01:CDS | 25.0% |
| AACCTTAATAGAGAGTTTCA+TGG | + | Chr6:98245078-98245097 | None:intergenic | 30.0% | |
| AGTGATAAAACCTTTGCAAT+TGG | - | Chr6:98244726-98244745 | MsG0680035054.01.T01:CDS | 30.0% | |
| !!! | AATATGTTCCTGCTTTTTTG+AGG | + | Chr6:98245019-98245038 | None:intergenic | 30.0% |
| !!! | ATATGTTCCTGCTTTTTTGA+GGG | + | Chr6:98245018-98245037 | None:intergenic | 30.0% |
| ACTATGACAGTGTTCAACTA+TGG | - | Chr6:98244894-98244913 | MsG0680035054.01.T01:intron | 35.0% | |
| TCAATTAGTACAGACAGTAG+CGG | - | Chr6:98244978-98244997 | MsG0680035054.01.T01:intron | 35.0% | |
| TGCCATGAAACTCTCTATTA+AGG | - | Chr6:98245073-98245092 | MsG0680035054.01.T01:CDS | 35.0% | |
| !! | GATACTTTAGGTTGGACAAT+CGG | - | Chr6:98244681-98244700 | MsG0680035054.01.T01:CDS | 35.0% |
| !!! | TATGTTCCTGCTTTTTTGAG+GGG | + | Chr6:98245017-98245036 | None:intergenic | 35.0% |
| ACAGTGTTCAACTATGGAGT+CGG | - | Chr6:98244900-98244919 | MsG0680035054.01.T01:intron | 40.0% | |
| ! | CGGTTCTGATTATAACGCAT+GGG | - | Chr6:98244701-98244720 | MsG0680035054.01.T01:CDS | 40.0% |
| ! | TACTTCATATGTGCTGTTCC+TGG | - | Chr6:98245038-98245057 | MsG0680035054.01.T01:CDS | 40.0% |
| ! | TCGGTTCTGATTATAACGCA+TGG | - | Chr6:98244700-98244719 | MsG0680035054.01.T01:CDS | 40.0% |
| !!! | TTTTTTGAGGGGAATGGTTG+TGG | + | Chr6:98245006-98245025 | None:intergenic | 40.0% |
| ACCATTCCCCTCAAAAAAGC+AGG | - | Chr6:98245008-98245027 | MsG0680035054.01.T01:CDS | 45.0% | |
| CAGTGTTCAACTATGGAGTC+GGG | - | Chr6:98244901-98244920 | MsG0680035054.01.T01:intron | 45.0% | |
| GAGACTGTCACCAATTGCAA+AGG | + | Chr6:98244739-98244758 | None:intergenic | 45.0% | |
| GTGTGGACAGTTGCAAAAGT+TGG | + | Chr6:98244654-98244673 | None:intergenic | 45.0% | |
| ! | CCAACCTAAAGTATCCCCAA+CGG | + | Chr6:98244676-98244695 | None:intergenic | 45.0% |
| !!! | TCCTGCTTTTTTGAGGGGAA+TGG | + | Chr6:98245012-98245031 | None:intergenic | 45.0% |
| ATGGCAGCTATGCAATGTCC+AGG | + | Chr6:98245059-98245078 | None:intergenic | 50.0% | |
| CACACCGTTGGGGATACTTT+AGG | - | Chr6:98244669-98244688 | MsG0680035054.01.T01:CDS | 50.0% | |
| CCGTTGGGGATACTTTAGGT+TGG | - | Chr6:98244673-98244692 | MsG0680035054.01.T01:CDS | 50.0% | |
| TTGCAACTGTCCACACCGTT+GGG | - | Chr6:98244658-98244677 | MsG0680035054.01.T01:CDS | 50.0% | |
| TTTGCAACTGTCCACACCGT+TGG | - | Chr6:98244657-98244676 | MsG0680035054.01.T01:CDS | 50.0% | |
| ! | CTAAAGTATCCCCAACGGTG+TGG | + | Chr6:98244671-98244690 | None:intergenic | 50.0% |
| TGCAACTGTCCACACCGTTG+GGG | - | Chr6:98244659-98244678 | MsG0680035054.01.T01:CDS | 55.0% | |
| CTATGGAGTCGGGCACACAG+TGG | - | Chr6:98244911-98244930 | MsG0680035054.01.T01:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 98244630 | 98245112 | 98244630 | ID=MsG0680035054.01;Name=MsG0680035054.01 |
| Chr6 | mRNA | 98244630 | 98245112 | 98244630 | ID=MsG0680035054.01.T01;Parent=MsG0680035054.01;Name=MsG0680035054.01.T01;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|0|0|2|0|112 |
| Chr6 | exon | 98244630 | 98244838 | 98244630 | ID=MsG0680035054.01.T01:exon:7507;Parent=MsG0680035054.01.T01 |
| Chr6 | exon | 98244983 | 98245112 | 98244983 | ID=MsG0680035054.01.T01:exon:7506;Parent=MsG0680035054.01.T01 |
| Chr6 | CDS | 98244983 | 98245112 | 98244983 | ID=MsG0680035054.01.T01:cds;Parent=MsG0680035054.01.T01 |
| Chr6 | CDS | 98244630 | 98244838 | 98244630 | ID=MsG0680035054.01.T01:cds;Parent=MsG0680035054.01.T01 |
| Gene Sequence |
| Protein sequence |
