AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035159.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035159.01.T01 MTR_6g078890 76.768 396 88 1 13 404 747 1142 0.0 596
MsG0680035159.01.T01 MTR_6g078980 76.656 317 42 3 90 406 3 287 1.34e-166 468
MsG0680035159.01.T01 MTR_6g078980 74.615 130 33 0 43 172 3 132 5.38e-59 194
MsG0680035159.01.T01 MTR_6g078980 74.336 113 29 0 13 125 20 132 6.52e-49 167
MsG0680035159.01.T01 MTR_1g019550 50.444 450 162 7 13 404 978 1424 1.30e-127 400
MsG0680035159.01.T01 MTR_1g019550 58.635 249 98 2 13 256 790 1038 3.77e-76 258
MsG0680035159.01.T01 MTR_1g019550 60.435 230 90 1 13 241 837 1066 3.82e-75 254
MsG0680035159.01.T01 MTR_1g019550 56.746 252 104 2 10 256 505 756 2.72e-74 252
MsG0680035159.01.T01 MTR_1g019550 60.435 230 90 1 13 241 649 878 2.24e-73 249
MsG0680035159.01.T01 MTR_1g019550 59.130 230 93 1 13 241 743 972 7.32e-73 248
MsG0680035159.01.T01 MTR_1g019550 59.130 230 93 1 13 241 696 925 1.42e-72 247
MsG0680035159.01.T01 MTR_1g019550 56.225 249 104 2 13 256 555 803 2.29e-71 244
MsG0680035159.01.T01 MTR_1g019550 54.510 255 105 3 13 259 884 1135 3.09e-70 240
MsG0680035159.01.T01 MTR_1g019550 57.826 230 96 1 13 241 602 831 1.69e-69 238
MsG0680035159.01.T01 MTR_1g019550 60.000 215 85 1 8 222 457 670 2.67e-68 235
MsG0680035159.01.T01 MTR_1g019550 50.444 450 162 7 13 404 1122 1568 9.20e-127 400
MsG0680035159.01.T01 MTR_1g019550 58.635 249 98 2 13 256 934 1182 4.34e-76 257
MsG0680035159.01.T01 MTR_1g019550 60.435 230 90 1 13 241 981 1210 4.69e-75 254
MsG0680035159.01.T01 MTR_1g019550 56.746 252 104 2 10 256 649 900 3.26e-74 252
MsG0680035159.01.T01 MTR_1g019550 60.435 230 90 1 13 241 793 1022 2.71e-73 249
MsG0680035159.01.T01 MTR_1g019550 59.130 230 93 1 13 241 887 1116 8.73e-73 248
MsG0680035159.01.T01 MTR_1g019550 59.130 230 93 1 13 241 840 1069 1.73e-72 247
MsG0680035159.01.T01 MTR_1g019550 56.225 249 104 2 13 256 699 947 3.06e-71 243
MsG0680035159.01.T01 MTR_1g019550 54.510 255 105 3 13 259 1028 1279 3.62e-70 240
MsG0680035159.01.T01 MTR_1g019550 57.826 230 96 1 13 241 746 975 2.05e-69 238
MsG0680035159.01.T01 MTR_1g019550 60.000 215 85 1 8 222 601 814 3.52e-68 234
MsG0680035159.01.T01 MTR_1g019550 50.444 450 162 7 13 404 1155 1601 1.18e-126 400
MsG0680035159.01.T01 MTR_1g019550 58.635 249 98 2 13 256 967 1215 4.13e-76 258
MsG0680035159.01.T01 MTR_1g019550 60.435 230 90 1 13 241 1014 1243 4.55e-75 254
MsG0680035159.01.T01 MTR_1g019550 56.746 252 104 2 10 256 682 933 3.58e-74 252
MsG0680035159.01.T01 MTR_1g019550 60.435 230 90 1 13 241 826 1055 2.73e-73 249
MsG0680035159.01.T01 MTR_1g019550 59.130 230 93 1 13 241 920 1149 8.71e-73 248
MsG0680035159.01.T01 MTR_1g019550 59.130 230 93 1 13 241 873 1102 1.62e-72 247
MsG0680035159.01.T01 MTR_1g019550 56.225 249 104 2 13 256 732 980 3.02e-71 243
MsG0680035159.01.T01 MTR_1g019550 54.510 255 105 3 13 259 1061 1312 3.54e-70 240
MsG0680035159.01.T01 MTR_1g019550 57.826 230 96 1 13 241 779 1008 2.10e-69 238
MsG0680035159.01.T01 MTR_1g019550 60.000 215 85 1 8 222 634 847 3.61e-68 234
MsG0680035159.01.T01 MTR_6g078480 53.555 422 158 10 13 404 778 1191 2.54e-124 388
MsG0680035159.01.T01 MTR_6g078480 61.538 208 79 1 8 215 680 886 6.41e-67 231
MsG0680035159.01.T01 MTR_6g078480 49.129 287 113 8 32 306 653 918 1.37e-55 198
MsG0680035159.01.T01 MTR_6g079120 49.897 487 147 10 13 404 643 1127 1.57e-123 384
MsG0680035159.01.T01 MTR_6g079120 53.478 230 83 2 10 215 591 820 4.27e-57 202
MsG0680035159.01.T01 MTR_6g079120 51.515 231 56 4 49 257 610 806 1.18e-48 177
MsG0680035159.01.T01 MTR_6g079000 51.627 461 153 10 13 404 1239 1698 4.18e-121 385
MsG0680035159.01.T01 MTR_6g079000 62.868 272 92 4 13 277 1098 1367 2.40e-90 298
MsG0680035159.01.T01 MTR_6g079000 65.462 249 81 2 13 256 1004 1252 3.89e-89 295
MsG0680035159.01.T01 MTR_6g079000 65.462 249 81 2 13 256 910 1158 7.93e-88 291
MsG0680035159.01.T01 MTR_6g079000 66.957 230 75 1 13 241 722 951 1.78e-87 290
MsG0680035159.01.T01 MTR_6g079000 63.889 252 80 3 13 256 816 1064 1.69e-86 287
MsG0680035159.01.T01 MTR_6g079000 64.659 249 83 2 13 256 863 1111 2.98e-85 284
MsG0680035159.01.T01 MTR_6g079000 65.351 228 75 1 13 236 769 996 1.57e-84 282
MsG0680035159.01.T01 MTR_6g079000 66.087 230 77 1 13 241 957 1186 1.34e-83 279
MsG0680035159.01.T01 MTR_6g079000 64.348 230 81 1 13 241 675 904 1.79e-80 270
MsG0680035159.01.T01 MTR_6g079000 54.724 254 109 3 8 256 624 876 6.30e-69 237
MsG0680035159.01.T01 MTR_6g079000 56.831 183 57 1 12 172 1216 1398 9.13e-50 181
MsG0680035159.01.T01 MTR_6g079000 40.143 279 100 7 38 256 558 829 2.07e-38 148
MsG0680035159.01.T01 MTR_0012s0290 51.756 427 153 8 13 403 722 1131 2.75e-119 374
MsG0680035159.01.T01 MTR_0012s0290 55.411 231 99 3 8 236 625 853 4.83e-61 214
MsG0680035159.01.T01 MTR_0012s0290 51.046 239 96 7 23 257 595 816 4.08e-50 182
MsG0680035159.01.T01 MTR_6g079140 51.835 436 158 10 13 404 849 1276 6.91e-119 375
MsG0680035159.01.T01 MTR_6g079140 62.041 245 84 2 13 257 708 943 4.95e-72 245
MsG0680035159.01.T01 MTR_6g079140 54.480 279 100 5 13 271 755 1026 1.84e-70 241
MsG0680035159.01.T01 MTR_6g079140 57.082 233 89 3 33 257 681 910 4.42e-62 217
MsG0680035159.01.T01 MTR_6g079090 54.306 418 157 11 13 404 863 1272 6.25e-118 376
MsG0680035159.01.T01 MTR_6g079090 67.347 245 71 2 13 257 722 957 4.46e-89 295
MsG0680035159.01.T01 MTR_6g079090 62.800 250 88 2 13 257 675 924 1.83e-82 276
MsG0680035159.01.T01 MTR_6g079090 65.487 226 76 1 13 236 769 994 1.31e-80 270
MsG0680035159.01.T01 MTR_6g079090 57.255 255 103 3 8 257 624 877 1.33e-72 247
MsG0680035159.01.T01 MTR_6g078930 47.741 509 146 11 13 404 940 1445 1.23e-117 374
MsG0680035159.01.T01 MTR_6g078930 50.450 333 68 7 13 257 802 1125 8.30e-71 242
MsG0680035159.01.T01 MTR_6g078930 50.333 300 97 5 12 262 757 1053 3.84e-66 229
MsG0680035159.01.T01 MTR_6g078930 52.045 269 63 3 13 215 871 1139 1.48e-65 227
MsG0680035159.01.T01 MTR_6g078930 38.957 326 119 8 10 257 587 910 1.63e-40 154
MsG0680035159.01.T01 MTR_6g078930 41.885 191 94 6 82 262 616 799 1.78e-22 100
MsG0680035159.01.T01 MTR_3g006280 51.636 428 154 8 13 404 1110 1520 2.44e-117 374
MsG0680035159.01.T01 MTR_3g006280 74.107 224 57 1 19 241 834 1057 4.87e-95 311
MsG0680035159.01.T01 MTR_3g006280 72.961 233 56 2 13 241 781 1010 2.96e-90 298
MsG0680035159.01.T01 MTR_3g006280 69.048 252 67 3 13 256 875 1123 5.43e-89 294
MsG0680035159.01.T01 MTR_3g006280 76.667 210 49 0 13 222 969 1178 4.65e-87 289
MsG0680035159.01.T01 MTR_3g006280 66.094 233 72 2 13 241 734 963 9.51e-77 259
MsG0680035159.01.T01 MTR_3g006280 66.524 233 71 2 13 241 687 916 5.11e-76 257
MsG0680035159.01.T01 MTR_3g006280 66.883 154 51 0 19 172 1069 1222 1.08e-54 195
MsG0680035159.01.T01 MTR_6g077640 51.174 426 156 10 13 394 829 1246 3.10e-113 359
MsG0680035159.01.T01 MTR_6g077640 48.052 308 104 6 13 271 706 1006 7.44e-67 230
MsG0680035159.01.T01 MTR_6g077640 51.575 254 85 3 33 257 679 923 3.98e-62 217
MsG0680035159.01.T01 MTR_6g077640 45.894 207 104 3 33 233 628 832 9.18e-43 160
MsG0680035159.01.T01 MTR_8g032830 49.624 399 147 7 13 378 650 1027 4.11e-102 327
MsG0680035159.01.T01 MTR_8g032830 46.207 145 70 3 82 222 624 764 5.58e-27 114
MsG0680035159.01.T01 MTR_6g078480 48.635 403 169 12 8 404 643 1013 1.70e-100 321
MsG0680035159.01.T01 MTR_0012s0290 46.189 433 154 10 8 403 623 1013 2.53e-97 317
MsG0680035159.01.T01 MTR_0012s0290 61.486 148 55 1 91 236 588 735 7.42e-44 164
MsG0680035159.01.T01 MTR_0012s0290 61.871 139 49 1 44 182 588 722 6.11e-43 161
MsG0680035159.01.T01 MTR_0012s0290 54.487 156 61 3 103 257 552 698 5.13e-32 129
MsG0680035159.01.T01 MTR_0007s0150 44.717 407 156 9 13 354 107 509 7.06e-88 278
MsG0680035159.01.T01 MTR_0007s0150 48.500 200 83 3 33 215 81 277 3.87e-45 164
MsG0680035159.01.T01 MTR_0007s0150 50.000 160 62 2 80 222 81 239 3.54e-37 142
MsG0680035159.01.T01 MTR_0012s0290 59.615 208 82 2 8 215 625 830 1.42e-61 214
MsG0680035159.01.T01 MTR_0012s0290 46.043 278 117 5 13 265 722 991 5.00e-53 190
MsG0680035159.01.T01 MTR_0012s0290 59.412 170 65 1 13 182 675 840 1.34e-51 186
MsG0680035159.01.T01 MTR_0012s0290 51.046 239 96 7 23 257 595 816 3.01e-50 182
MsG0680035159.01.T01 MTR_6g075880 37.705 366 180 12 82 404 624 984 1.07e-50 183
MsG0680035159.01.T01 MTR_6g075970 34.293 417 215 15 13 404 665 1047 3.55e-49 179
MsG0680035159.01.T01 MTR_0038s0080 34.293 417 215 15 13 404 665 1047 3.55e-49 179
MsG0680035159.01.T01 MTR_8g039910 33.188 458 232 17 8 404 661 1105 5.30e-48 176
MsG0680035159.01.T01 MTR_8g039870 33.188 458 232 17 8 404 661 1105 5.30e-48 176
MsG0680035159.01.T01 MTR_6g008140 35.577 416 207 15 8 404 498 871 3.53e-47 173
MsG0680035159.01.T01 MTR_6g008140 35.392 421 201 16 8 404 652 1025 4.21e-47 173
MsG0680035159.01.T01 MTR_6g008140 35.577 416 207 15 8 404 513 886 5.44e-47 172
MsG0680035159.01.T01 MTR_0038s0060 34.063 411 176 15 82 404 514 917 6.54e-47 172
MsG0680035159.01.T01 MTR_6g075950 34.063 411 176 15 82 404 496 899 7.35e-47 172
MsG0680035159.01.T01 MTR_8g075440 34.699 415 212 18 38 404 634 1037 5.53e-46 170
MsG0680035159.01.T01 MTR_6g076090 34.483 435 200 20 8 404 651 1038 3.50e-45 167
MsG0680035159.01.T01 MTR_6g076090 41.748 103 54 3 81 182 629 726 6.44e-14 74.3
MsG0680035159.01.T01 MTR_6g477750 44.344 221 103 7 192 404 2 210 2.22e-44 155
MsG0680035159.01.T01 MTR_6g075690 34.689 418 210 18 38 404 610 1015 1.79e-43 162
MsG0680035159.01.T01 MTR_6g078875 57.692 156 60 3 38 190 1 153 2.31e-43 149
MsG0680035159.01.T01 MTR_6g078875 57.353 136 57 1 8 143 19 153 8.29e-41 142
MsG0680035159.01.T01 MTR_6g078875 50.000 154 71 3 85 233 1 153 4.13e-32 119
MsG0680035159.01.T01 MTR_6g008140 34.257 397 179 13 85 404 810 1201 1.48e-42 160
MsG0680035159.01.T01 MTR_0019s0100 32.407 432 204 17 38 404 642 1050 1.60e-42 160
MsG0680035159.01.T01 MTR_6g076220 34.491 432 208 18 8 404 659 1050 1.16e-41 157
MsG0680035159.01.T01 MTR_1g060030 32.533 458 206 21 8 404 481 896 3.40e-41 155
MsG0680035159.01.T01 MTR_6g077500 34.031 382 183 15 80 404 682 1051 7.41e-41 155
MsG0680035159.01.T01 MTR_5g038180 33.186 452 219 18 18 403 619 1053 1.59e-40 154
MsG0680035159.01.T01 MTR_8g087130 34.541 414 214 17 8 405 439 811 4.07e-40 152
MsG0680035159.01.T01 MTR_8g087130 42.391 92 51 2 82 172 418 508 5.68e-11 65.1
MsG0680035159.01.T01 MTR_8g042470 31.478 467 209 17 38 404 632 1087 2.90e-39 150
MsG0680035159.01.T01 MTR_8g042470 31.478 467 209 17 38 404 632 1087 3.53e-39 150
MsG0680035159.01.T01 MTR_8g042470 31.478 467 209 17 38 404 632 1087 3.83e-39 150
MsG0680035159.01.T01 MTR_0007s0090 40.959 271 151 4 13 276 147 415 1.35e-38 148
MsG0680035159.01.T01 MTR_0007s0090 41.221 262 147 3 13 269 100 359 1.87e-37 144
MsG0680035159.01.T01 MTR_0007s0090 41.797 256 142 3 19 269 59 312 2.04e-36 142
MsG0680035159.01.T01 MTR_0007s0090 40.076 262 150 3 13 269 241 500 3.73e-36 141
MsG0680035159.01.T01 MTR_0007s0090 38.376 271 158 4 13 276 335 603 3.16e-35 138
MsG0680035159.01.T01 MTR_0007s0090 41.948 267 147 4 8 269 2 265 5.98e-34 134
MsG0680035159.01.T01 MTR_0007s0090 40.807 223 131 1 13 234 429 651 4.40e-32 129
MsG0680035159.01.T01 MTR_0007s0090 39.640 222 106 2 13 209 476 694 2.80e-30 123
MsG0680035159.01.T01 MTR_0007s0090 36.900 271 144 3 13 256 382 652 3.63e-30 123
MsG0680035159.01.T01 MTR_0007s0090 44.231 104 55 1 12 115 594 694 1.66e-15 79.0
MsG0680035159.01.T01 MTR_8g042650 32.068 474 214 18 31 405 621 1085 1.47e-38 148
MsG0680035159.01.T01 MTR_6g478080 43.781 201 113 0 13 213 930 1130 1.95e-38 148
MsG0680035159.01.T01 MTR_6g478080 42.424 231 129 1 13 239 883 1113 2.34e-38 147
MsG0680035159.01.T01 MTR_6g478080 41.176 255 144 3 8 257 644 897 7.94e-37 143
MsG0680035159.01.T01 MTR_6g478080 39.044 251 145 2 13 262 789 1032 9.48e-36 140
MsG0680035159.01.T01 MTR_6g478080 40.562 249 143 2 13 256 836 1084 2.23e-35 139
MsG0680035159.01.T01 MTR_6g478080 42.174 230 132 1 13 241 742 971 4.37e-35 138
MsG0680035159.01.T01 MTR_4g016610 31.894 417 223 17 13 404 640 1020 3.25e-38 147
MsG0680035159.01.T01 MTR_8g042660 31.878 458 231 19 8 403 649 1087 9.55e-38 146
MsG0680035159.01.T01 MTR_0007s0070 39.852 271 154 4 13 276 147 415 1.36e-37 142
MsG0680035159.01.T01 MTR_0007s0070 41.016 256 144 3 19 269 59 312 1.57e-35 137
MsG0680035159.01.T01 MTR_0007s0070 41.304 276 152 5 8 276 2 274 2.79e-34 133
MsG0680035159.01.T01 MTR_0007s0070 40.807 223 131 1 13 234 241 463 2.34e-32 128
MsG0680035159.01.T01 MTR_0007s0070 37.638 271 142 3 13 256 194 464 5.02e-32 127
MsG0680035159.01.T01 MTR_0007s0070 40.265 226 107 2 13 213 288 510 6.41e-32 127
MsG0680035159.01.T01 MTR_0007s0070 38.462 273 139 5 13 269 100 359 7.28e-32 127
MsG0680035159.01.T01 MTR_0007s0070 38.462 182 83 3 13 169 335 512 5.49e-22 98.2
MsG0680035159.01.T01 MTR_0007s0070 45.045 111 57 2 12 122 406 512 4.42e-17 83.6
MsG0680035159.01.T01 MTR_6g072320 31.250 448 218 18 35 400 568 1007 9.91e-37 142
MsG0680035159.01.T01 MTR_6g071945 31.250 448 218 18 35 400 568 1007 9.91e-37 142
MsG0680035159.01.T01 MTR_0007s0140 40.075 267 152 4 8 269 655 918 5.73e-36 140
MsG0680035159.01.T01 MTR_0007s0140 41.991 231 130 1 13 239 753 983 6.35e-36 140
MsG0680035159.01.T01 MTR_0007s0140 41.667 204 119 0 10 213 797 1000 9.04e-35 137
MsG0680035159.01.T01 MTR_0007s0140 39.357 249 146 2 13 256 706 954 1.19e-31 127
MsG0680035159.01.T01 MTR_6g073250 32.381 420 216 15 13 404 657 1036 9.01e-36 140
MsG0680035159.01.T01 MTR_6g072460 33.724 427 211 17 13 404 648 1037 1.57e-35 139
MsG0680035159.01.T01 MTR_4g051738 30.405 444 226 17 35 404 565 999 1.13e-34 137
MsG0680035159.01.T01 MTR_8g042440 32.203 413 221 16 10 378 654 1051 2.18e-33 133
MsG0680035159.01.T01 MTR_8g042440 37.107 159 87 8 54 209 610 758 1.49e-12 70.1
MsG0680035159.01.T01 MTR_5g040490 29.847 459 242 17 12 403 608 1053 3.82e-33 132
MsG0680035159.01.T01 MTR_6g071895 31.068 412 231 15 35 404 343 743 5.40e-33 131
MsG0680035159.01.T01 MTR_6g072250 30.695 417 226 16 35 404 563 963 6.36e-33 131
MsG0680035159.01.T01 MTR_6g071895 30.695 417 226 16 35 404 563 963 6.36e-33 131
MsG0680035159.01.T01 MTR_6g071430 29.099 433 227 18 8 391 620 1021 1.96e-32 130
MsG0680035159.01.T01 MTR_6g071430 36.486 148 91 3 24 169 588 734 5.74e-15 77.4
MsG0680035159.01.T01 MTR_6g071430 36.765 136 83 3 82 215 599 733 3.87e-14 75.1
MsG0680035159.01.T01 MTR_0277s0020 30.026 383 189 14 82 400 614 981 1.11e-31 128
MsG0680035159.01.T01 MTR_4g051682 30.482 456 219 18 35 404 482 925 2.52e-31 127
MsG0680035159.01.T01 MTR_3g012470 27.955 440 239 15 37 403 595 1029 6.20e-31 125
MsG0680035159.01.T01 MTR_3g012470 27.955 440 239 15 37 403 595 1029 8.18e-31 125
MsG0680035159.01.T01 MTR_6g071790 28.910 422 215 16 8 399 620 986 2.26e-30 124
MsG0680035159.01.T01 MTR_6g074875 28.316 392 235 14 38 400 615 989 3.01e-30 123
MsG0680035159.01.T01 MTR_6g083860 28.810 420 216 15 38 400 625 1018 3.29e-30 123
MsG0680035159.01.T01 MTR_6g074810 32.308 390 216 19 46 400 642 1018 9.09e-30 122
MsG0680035159.01.T01 MTR_6g078950 48.701 154 55 3 34 187 201 330 1.38e-29 117
MsG0680035159.01.T01 MTR_6g078950 66.234 77 26 0 17 93 254 330 4.12e-23 99.8
MsG0680035159.01.T01 MTR_6g078950 40.314 191 74 5 70 223 132 319 1.71e-22 97.8
MsG0680035159.01.T01 MTR_2g041070 29.808 416 232 16 38 400 621 1029 1.89e-29 121
MsG0680035159.01.T01 MTR_2g041070 37.168 113 69 2 58 169 594 705 7.38e-12 67.8
MsG0680035159.01.T01 MTR_2g041070 29.808 416 232 16 38 400 621 1029 2.18e-29 121
MsG0680035159.01.T01 MTR_2g041070 37.168 113 69 2 58 169 594 705 7.30e-12 67.8
MsG0680035159.01.T01 MTR_1g007300 29.138 429 211 17 8 400 649 1020 3.50e-29 120
MsG0680035159.01.T01 MTR_0277s0020 29.298 413 223 16 38 400 617 1010 5.84e-29 120
MsG0680035159.01.T01 MTR_6g072480 31.555 431 217 21 13 404 657 1048 1.96e-28 118
MsG0680035159.01.T01 MTR_0012s0280 46.429 140 63 1 34 173 1 128 2.98e-28 108
MsG0680035159.01.T01 MTR_0012s0280 44.286 140 66 1 81 220 1 128 6.89e-26 102
MsG0680035159.01.T01 MTR_0012s0280 45.614 114 50 1 13 126 27 128 1.05e-20 88.2
MsG0680035159.01.T01 MTR_0277s0020 29.268 410 221 16 41 400 644 1034 5.17e-28 117
MsG0680035159.01.T01 MTR_6g074660 30.500 400 235 16 38 404 635 1024 7.41e-28 116
MsG0680035159.01.T01 MTR_0277s0010 31.658 398 217 17 38 399 544 922 9.35e-28 116
MsG0680035159.01.T01 MTR_0277s0010 31.658 398 217 17 38 399 617 995 9.65e-28 116
MsG0680035159.01.T01 MTR_3g019080 28.440 436 237 17 35 405 609 1034 1.13e-27 116
MsG0680035159.01.T01 MTR_1g063960 28.381 451 226 19 13 404 631 1043 1.49e-27 115
MsG0680035159.01.T01 MTR_6g075780 28.775 351 199 13 77 404 337 659 1.50e-27 115
MsG0680035159.01.T01 MTR_6g072510 31.368 424 219 15 35 404 576 981 1.81e-27 115
MsG0680035159.01.T01 MTR_6g471270 28.125 416 229 16 8 399 129 498 3.58e-27 113
MsG0680035159.01.T01 MTR_6g072760 31.356 354 188 19 42 378 610 925 1.47e-26 112
MsG0680035159.01.T01 MTR_6g069560 30.986 426 222 21 8 404 638 1020 3.61e-26 111
MsG0680035159.01.T01 MTR_0286s0030 38.919 185 93 5 239 404 42 225 4.55e-26 105
MsG0680035159.01.T01 MTR_6g007995 38.919 185 93 5 239 404 42 225 4.55e-26 105
MsG0680035159.01.T01 MTR_6g074780 31.720 372 186 15 50 380 571 915 2.62e-25 108
MsG0680035159.01.T01 MTR_6g472230 28.706 425 219 17 8 399 804 1177 3.76e-25 108
MsG0680035159.01.T01 MTR_6g472300 28.706 425 219 17 8 399 620 993 4.08e-25 108
MsG0680035159.01.T01 MTR_8g069625 28.941 425 251 16 13 400 589 999 6.49e-25 107
MsG0680035159.01.T01 MTR_6g078420 29.091 440 224 20 16 403 631 1034 1.29e-24 107
MsG0680035159.01.T01 MTR_6g072450 28.926 484 235 21 9 400 542 1008 1.38e-24 107
MsG0680035159.01.T01 MTR_6g471270 30.492 305 168 11 8 308 129 393 1.50e-23 101
MsG0680035159.01.T01 MTR_6g072310 28.319 452 222 19 9 378 536 967 1.60e-23 103
MsG0680035159.01.T01 MTR_0419s0040 29.545 396 227 17 38 399 634 1011 2.27e-23 103
MsG0680035159.01.T01 MTR_6g071935 27.889 398 200 14 56 378 563 948 5.32e-23 102
MsG0680035159.01.T01 MTR_6g074620 34.389 221 103 7 132 312 634 852 9.39e-23 101
MsG0680035159.01.T01 MTR_6g074650 27.913 369 188 13 82 380 449 809 1.59e-21 97.8
MsG0680035159.01.T01 MTR_4g051688 29.722 360 166 15 116 404 348 691 5.33e-21 95.9
MsG0680035159.01.T01 MTR_6g072590 27.107 439 235 17 8 404 619 1014 7.73e-21 95.5
MsG0680035159.01.T01 MTR_6g074820 28.395 405 213 17 38 400 638 1007 1.47e-20 94.7
MsG0680035159.01.T01 MTR_6g071925 35.849 212 97 8 225 404 638 842 6.55e-20 92.8
MsG0680035159.01.T01 MTR_6g072290 36.321 212 96 8 225 404 732 936 7.76e-20 92.4
MsG0680035159.01.T01 MTR_6g008140 35.115 262 129 10 8 268 546 767 7.97e-20 92.4
MsG0680035159.01.T01 MTR_6g008140 35.115 262 129 10 8 268 513 734 7.98e-20 92.4
MsG0680035159.01.T01 MTR_6g471220 33.533 167 93 7 225 381 60 218 2.43e-19 87.0
MsG0680035159.01.T01 MTR_6g072780 30.519 308 144 12 39 300 540 823 2.95e-19 90.5
MsG0680035159.01.T01 MTR_6g072780 30.519 308 144 12 39 300 540 823 3.77e-19 90.1
MsG0680035159.01.T01 MTR_4g051715 28.721 383 180 16 82 404 594 943 7.59e-19 89.4
MsG0680035159.01.T01 MTR_5g040440 32.955 264 126 13 24 265 404 638 9.36e-18 85.9
MsG0680035159.01.T01 MTR_4g051662 29.577 355 173 15 94 400 580 905 2.63e-17 84.7
MsG0680035159.01.T01 MTR_6g478020 29.900 301 180 11 14 298 844 1129 1.63e-16 82.4
MsG0680035159.01.T01 MTR_4g023040 25.561 446 242 21 8 403 597 1002 3.14e-16 81.6
MsG0680035159.01.T01 MTR_4g023260 25.054 463 223 21 8 403 639 1044 9.74e-16 80.1
MsG0680035159.01.T01 MTR_6g072570 33.654 208 103 7 227 404 93 295 1.35e-15 77.4
MsG0680035159.01.T01 MTR_4g051698 31.541 279 161 12 38 299 611 876 8.34e-15 77.0
MsG0680035159.01.T01 MTR_1g063970 26.866 335 156 13 39 320 297 595 2.96e-14 75.1
MsG0680035159.01.T01 MTR_5g090940 26.682 431 266 21 8 403 645 1060 4.34e-14 75.1
MsG0680035159.01.T01 MTR_4g023060 24.153 443 252 18 8 403 624 1029 5.93e-14 74.3
MsG0680035159.01.T01 MTR_5g076840 32.083 240 135 7 25 257 591 809 8.47e-14 73.9
MsG0680035159.01.T01 MTR_8g090305 28.070 342 143 13 12 254 96 433 1.25e-13 72.8
MsG0680035159.01.T01 MTR_8g090305 28.664 307 157 13 10 261 212 511 5.60e-13 70.9
MsG0680035159.01.T01 MTR_8g090305 29.097 299 150 13 12 255 238 529 1.92e-11 66.2
MsG0680035159.01.T01 MTR_6g478030 31.153 321 154 15 14 299 617 905 2.48e-13 72.4
MsG0680035159.01.T01 MTR_4g023220 27.596 337 206 15 8 339 235 538 1.46e-12 70.1
MsG0680035159.01.T01 MTR_6g072460 32.331 266 138 10 13 267 648 882 1.15e-11 67.0
MsG0680035159.01.T01 MTR_6g074090 27.391 230 124 6 85 313 611 798 1.23e-11 67.0
MsG0680035159.01.T01 MTR_6g039100 52.542 59 25 3 258 314 11 68 1.25e-11 62.0
MsG0680035159.01.T01 MTR_3g479510 28.030 264 164 12 10 256 636 890 1.48e-11 67.0
MsG0680035159.01.T01 MTR_4g050910 27.391 230 124 6 85 313 611 798 1.67e-11 66.6
MsG0680035159.01.T01 MTR_3g022230 27.083 240 154 6 13 246 1145 1369 2.05e-11 66.6
MsG0680035159.01.T01 MTR_6g074855 31.902 163 102 4 11 169 589 746 4.16e-11 65.5
MsG0680035159.01.T01 MTR_3g014080 29.097 299 153 17 13 284 936 1202 7.12e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035159.01.T01 AT4G16890 32.157 255 139 10 12 243 797 1040 2.74e-20 94.0
MsG0680035159.01.T01 AT4G16890 29.204 339 145 13 10 257 635 969 1.73e-16 82.4
MsG0680035159.01.T01 AT4G16890 30.864 243 119 10 13 212 845 1081 1.88e-15 79.3
MsG0680035159.01.T01 AT4G16890 32.941 255 130 12 35 256 612 858 4.59e-13 71.6
MsG0680035159.01.T01 AT4G16890 32.661 248 136 10 12 236 806 1045 3.65e-20 93.6
MsG0680035159.01.T01 AT4G16890 31.502 273 135 11 13 243 854 1116 1.49e-18 88.6
MsG0680035159.01.T01 AT4G16890 29.204 339 145 13 10 257 644 978 1.48e-16 82.8
MsG0680035159.01.T01 AT4G16890 32.941 255 130 12 35 256 621 867 4.29e-13 72.0
MsG0680035159.01.T01 AT4G16890 32.780 241 132 9 12 229 797 1030 4.70e-20 93.2
MsG0680035159.01.T01 AT4G16890 31.502 273 135 11 13 243 845 1107 1.88e-18 88.6
MsG0680035159.01.T01 AT4G16890 29.204 339 145 13 10 257 635 969 1.94e-16 82.4
MsG0680035159.01.T01 AT4G16890 32.941 255 130 12 35 256 612 858 5.53e-13 71.6
MsG0680035159.01.T01 AT4G16940 29.863 365 188 14 1 308 545 898 5.33e-18 87.0
MsG0680035159.01.T01 AT4G16940 29.863 365 188 14 1 308 545 898 5.34e-18 87.0
MsG0680035159.01.T01 AT4G16940 29.863 365 188 14 1 308 545 898 5.34e-18 87.0
MsG0680035159.01.T01 AT4G16940 29.863 365 188 14 1 308 545 898 5.34e-18 87.0
MsG0680035159.01.T01 AT4G16940 29.863 365 188 14 1 308 545 898 5.50e-18 87.0
MsG0680035159.01.T01 AT4G16940 29.863 365 188 14 1 308 545 898 5.52e-18 87.0
MsG0680035159.01.T01 AT4G36150 27.577 359 189 16 13 316 677 1019 2.26e-17 85.1
MsG0680035159.01.T01 AT1G69550 33.462 260 157 9 10 258 979 1233 3.66e-17 84.3
MsG0680035159.01.T01 AT1G69550 35.443 237 139 9 10 236 907 1139 1.12e-16 82.8
MsG0680035159.01.T01 AT1G69550 32.567 261 161 9 10 259 835 1091 6.80e-11 65.1
MsG0680035159.01.T01 AT5G44870 29.586 338 194 16 13 316 462 789 5.39e-17 84.0
MsG0680035159.01.T01 AT5G44870 29.586 338 194 16 13 316 726 1053 1.55e-16 82.4
MsG0680035159.01.T01 AT5G51630 30.526 285 157 13 10 261 582 858 1.12e-15 79.7
MsG0680035159.01.T01 AT5G51630 30.526 285 157 13 10 261 582 858 1.12e-15 79.7
MsG0680035159.01.T01 AT5G51630 30.526 285 157 13 10 261 582 858 1.13e-15 79.7
MsG0680035159.01.T01 AT5G51630 30.526 285 157 13 10 261 646 922 1.29e-15 79.7
MsG0680035159.01.T01 AT5G51630 31.276 243 140 10 10 229 598 836 1.33e-15 79.7
MsG0680035159.01.T01 AT5G51630 30.526 285 157 13 10 261 582 858 1.62e-15 79.3
MsG0680035159.01.T01 AT3G44670 30.986 213 128 10 13 213 765 970 3.32e-15 78.6
MsG0680035159.01.T01 AT3G44670 30.986 213 128 10 13 213 765 970 3.32e-15 78.6
MsG0680035159.01.T01 AT5G45200 26.992 389 211 17 12 340 442 817 3.40e-15 78.2
MsG0680035159.01.T01 AT5G45200 26.992 389 211 17 12 340 686 1061 3.93e-15 78.2
MsG0680035159.01.T01 AT4G16920 30.072 276 157 12 10 257 772 1039 4.31e-15 78.2
MsG0680035159.01.T01 AT4G16920 31.897 232 139 8 35 257 909 1130 5.32e-14 74.7
MsG0680035159.01.T01 AT4G16920 30.882 204 114 6 13 195 935 1132 5.71e-14 74.7
MsG0680035159.01.T01 AT4G16920 30.072 276 157 12 10 257 772 1039 4.31e-15 78.2
MsG0680035159.01.T01 AT4G16920 31.897 232 139 8 35 257 909 1130 5.32e-14 74.7
MsG0680035159.01.T01 AT4G16920 30.882 204 114 6 13 195 935 1132 5.71e-14 74.7
MsG0680035159.01.T01 AT4G16920 30.072 276 157 12 10 257 772 1039 4.55e-15 78.2
MsG0680035159.01.T01 AT4G16920 31.897 232 139 8 35 257 909 1130 5.70e-14 74.7
MsG0680035159.01.T01 AT4G16920 30.882 204 114 6 13 195 935 1132 5.96e-14 74.3
MsG0680035159.01.T01 AT4G16920 30.072 276 157 12 10 257 772 1039 4.55e-15 78.2
MsG0680035159.01.T01 AT4G16920 31.897 232 139 8 35 257 909 1130 5.70e-14 74.7
MsG0680035159.01.T01 AT4G16920 30.882 204 114 6 13 195 935 1132 5.96e-14 74.3
MsG0680035159.01.T01 AT4G16950 30.072 276 157 12 10 257 778 1045 4.73e-15 77.8
MsG0680035159.01.T01 AT4G16950 32.547 212 130 7 35 243 915 1116 5.63e-14 74.7
MsG0680035159.01.T01 AT4G16950 30.882 204 114 6 13 195 941 1138 7.82e-14 74.3
MsG0680035159.01.T01 AT4G16920 31.159 276 154 14 10 257 772 1039 5.02e-15 77.8
MsG0680035159.01.T01 AT4G16920 30.882 204 114 6 13 195 935 1132 6.02e-14 74.3
MsG0680035159.01.T01 AT4G16920 31.897 232 139 8 35 257 909 1130 6.41e-14 74.3
MsG0680035159.01.T01 AT4G16920 31.047 277 153 14 10 257 772 1039 5.14e-15 77.8
MsG0680035159.01.T01 AT4G16920 30.882 204 114 6 13 195 935 1132 5.45e-14 74.7
MsG0680035159.01.T01 AT4G16920 32.547 212 130 7 35 243 909 1110 5.75e-14 74.7
MsG0680035159.01.T01 AT4G16950 30.072 276 157 12 10 257 778 1045 5.17e-15 77.8
MsG0680035159.01.T01 AT4G16950 32.547 212 130 7 35 243 915 1116 5.77e-14 74.7
MsG0680035159.01.T01 AT4G16950 30.882 204 114 6 13 195 941 1138 7.74e-14 74.3
MsG0680035159.01.T01 AT4G16920 31.047 277 153 14 10 257 772 1039 5.25e-15 77.8
MsG0680035159.01.T01 AT4G16920 30.882 204 114 6 13 195 935 1132 5.92e-14 74.3
MsG0680035159.01.T01 AT4G16920 31.897 232 139 8 35 257 909 1130 6.76e-14 74.3
MsG0680035159.01.T01 AT4G16920 31.047 277 153 14 10 257 772 1039 5.25e-15 77.8
MsG0680035159.01.T01 AT4G16920 30.882 204 114 6 13 195 935 1132 5.92e-14 74.3
MsG0680035159.01.T01 AT4G16920 31.897 232 139 8 35 257 909 1130 6.76e-14 74.3
MsG0680035159.01.T01 AT4G16920 31.047 277 153 14 10 257 772 1039 5.48e-15 77.8
MsG0680035159.01.T01 AT4G16920 30.882 204 114 6 13 195 935 1132 5.60e-14 74.7
MsG0680035159.01.T01 AT4G16920 32.547 212 130 7 35 243 909 1110 6.12e-14 74.3
MsG0680035159.01.T01 AT4G16950 31.047 277 153 14 10 257 778 1045 5.72e-15 77.8
MsG0680035159.01.T01 AT4G16950 32.547 212 130 7 35 243 915 1116 6.33e-14 74.3
MsG0680035159.01.T01 AT4G16950 30.882 204 114 6 13 195 941 1138 7.56e-14 74.3
MsG0680035159.01.T01 AT4G16950 30.072 276 157 12 10 257 778 1045 6.45e-15 77.4
MsG0680035159.01.T01 AT4G16950 31.897 232 139 8 35 257 915 1136 6.83e-14 74.3
MsG0680035159.01.T01 AT4G16950 30.882 204 114 6 13 195 941 1138 8.23e-14 73.9
MsG0680035159.01.T01 AT3G44480 30.345 290 150 14 6 257 707 982 5.92e-14 74.3
MsG0680035159.01.T01 AT3G44480 28.358 268 166 9 13 257 739 1003 2.15e-12 69.7
MsG0680035159.01.T01 AT3G44480 30.345 290 150 14 6 257 707 982 6.31e-14 74.3
MsG0680035159.01.T01 AT3G44480 28.358 268 166 9 13 257 739 1003 2.07e-12 69.7
MsG0680035159.01.T01 AT3G44480 30.345 290 150 14 6 257 707 982 6.31e-14 74.3
MsG0680035159.01.T01 AT3G44480 28.358 268 166 9 13 257 739 1003 2.07e-12 69.7
MsG0680035159.01.T01 AT3G44480 30.345 290 150 14 6 257 707 982 7.02e-14 74.3
MsG0680035159.01.T01 AT3G44480 28.358 268 166 9 13 257 739 1003 2.43e-12 69.3
MsG0680035159.01.T01 AT3G44480 30.345 290 150 14 6 257 707 982 7.02e-14 74.3
MsG0680035159.01.T01 AT3G44480 28.358 268 166 9 13 257 739 1003 2.43e-12 69.3
MsG0680035159.01.T01 AT4G16960 31.864 295 166 14 38 308 657 940 8.53e-14 73.9
MsG0680035159.01.T01 AT4G16960 29.493 217 125 9 35 229 762 972 1.29e-12 70.1
MsG0680035159.01.T01 AT5G45250 26.048 334 201 13 12 313 684 1003 9.21e-14 73.9
MsG0680035159.01.T01 AT4G16860 29.323 266 157 11 10 252 789 1046 2.41e-13 72.4
MsG0680035159.01.T01 AT4G16860 29.323 266 157 11 10 252 627 884 2.79e-13 72.4
MsG0680035159.01.T01 AT5G17880 25.507 345 195 15 13 316 685 1008 3.37e-13 72.0
MsG0680035159.01.T01 AT5G17880 25.507 345 195 15 13 316 685 1008 3.44e-13 72.0
MsG0680035159.01.T01 AT3G44630 25.876 371 233 18 10 358 808 1158 3.79e-13 72.0
MsG0680035159.01.T01 AT3G44630 31.551 187 118 7 35 215 738 920 1.23e-12 70.5
MsG0680035159.01.T01 AT4G16950 29.231 260 147 11 10 243 778 1026 3.81e-13 72.0
MsG0680035159.01.T01 AT3G44630 25.876 371 233 18 10 358 808 1158 4.50e-13 71.6
MsG0680035159.01.T01 AT3G44630 31.551 187 118 7 35 215 738 920 1.47e-12 70.1
MsG0680035159.01.T01 AT3G44630 25.876 371 233 18 10 358 808 1158 4.50e-13 71.6
MsG0680035159.01.T01 AT3G44630 31.551 187 118 7 35 215 738 920 1.47e-12 70.1
MsG0680035159.01.T01 AT3G44630 25.876 371 233 18 10 358 808 1158 4.50e-13 71.6
MsG0680035159.01.T01 AT3G44630 31.551 187 118 7 35 215 738 920 1.47e-12 70.1
MsG0680035159.01.T01 AT4G16950 29.231 260 147 11 10 243 778 1026 4.54e-13 71.6
MsG0680035159.01.T01 AT4G16890 32.549 255 131 12 35 256 621 867 6.25e-13 71.2
MsG0680035159.01.T01 AT4G16890 32.549 255 131 12 35 256 466 712 7.38e-13 70.9
MsG0680035159.01.T01 AT3G25510 31.513 238 145 10 21 245 588 820 8.63e-13 70.9
MsG0680035159.01.T01 AT3G25510 25.000 436 241 18 13 377 651 1071 2.13e-11 66.6
MsG0680035159.01.T01 AT3G25510 31.513 238 145 10 21 245 588 820 8.63e-13 70.9
MsG0680035159.01.T01 AT3G25510 25.000 436 241 18 13 377 651 1071 2.13e-11 66.6
MsG0680035159.01.T01 AT5G46470 28.824 340 176 18 13 311 658 972 1.32e-12 70.1
MsG0680035159.01.T01 AT2G17060 23.650 389 226 14 9 340 702 1076 1.38e-12 70.1
MsG0680035159.01.T01 AT2G17060 23.650 389 226 14 9 340 702 1076 1.38e-12 70.1
MsG0680035159.01.T01 AT5G41550 28.448 232 124 7 35 258 627 824 2.11e-12 69.7
MsG0680035159.01.T01 AT5G45230 26.023 342 193 13 16 316 686 1008 2.77e-12 69.3
MsG0680035159.01.T01 AT5G18360 33.824 204 108 9 35 215 629 828 3.53e-12 68.9
MsG0680035159.01.T01 AT5G18360 32.240 183 98 7 10 170 652 830 4.94e-12 68.2
MsG0680035159.01.T01 AT5G45050 29.478 268 166 10 1 257 410 665 7.86e-12 67.8
MsG0680035159.01.T01 AT5G45050 29.478 268 166 10 1 257 549 804 8.12e-12 67.8
MsG0680035159.01.T01 AT5G45050 29.478 268 166 10 1 257 549 804 8.33e-12 67.8
MsG0680035159.01.T01 AT5G45200 29.183 257 132 9 12 222 686 938 8.94e-12 67.8
MsG0680035159.01.T01 AT5G49140 31.034 203 107 8 85 260 633 829 1.08e-11 67.4
MsG0680035159.01.T01 AT2G14080 28.333 240 137 9 10 244 611 820 1.10e-11 67.4
MsG0680035159.01.T01 AT2G14080 28.333 240 137 9 10 244 744 953 1.14e-11 67.4
MsG0680035159.01.T01 AT3G51570 26.627 338 200 15 12 316 655 977 1.92e-11 66.6
MsG0680035159.01.T01 AT5G38850 31.156 199 112 6 82 257 613 809 2.80e-11 65.9
MsG0680035159.01.T01 AT4G08450 27.820 266 117 10 13 209 657 916 4.23e-11 65.5
MsG0680035159.01.T01 AT4G08450 27.820 266 117 10 13 209 657 916 4.37e-11 65.5
MsG0680035159.01.T01 AT4G14370 26.866 335 171 16 85 354 584 909 5.81e-11 65.1
MsG0680035159.01.T01 AT4G14370 26.866 335 171 16 85 354 627 952 6.65e-11 64.7
MsG0680035159.01.T01 AT4G14370 26.866 335 171 16 85 354 627 952 6.65e-11 64.7
MsG0680035159.01.T01 AT5G45050 30.672 238 136 11 1 217 549 778 6.81e-11 65.1
MsG0680035159.01.T01 AT4G12010 29.455 275 162 10 13 258 668 939 8.98e-11 64.7

Find 70 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATACATGGATTCCACTATTC+TGG 0.239481 6:+99859568 None:intergenic
CAGGATTGTCAATTTCCTTC+TGG 0.266881 6:-99859842 MsG0680035159.01.T01:CDS
TCCGACAACTATTAACATTC+AGG 0.285667 6:+99860405 None:intergenic
TGCGACATCTACTAACATTC+AGG 0.290968 6:+99860546 None:intergenic
ATTGTGATGGACGGGTTTCT+TGG 0.333686 6:-99860299 MsG0680035159.01.T01:CDS
GGATGATTGTAAGGAACTTC+AGG 0.344217 6:-99860126 MsG0680035159.01.T01:CDS
CACTTGTGGTGGATGGGTTA+TGG 0.345422 6:-99860160 MsG0680035159.01.T01:CDS
ATTGTGGTGGACGGGTTTCT+TGG 0.351570 6:-99860440 MsG0680035159.01.T01:CDS
ACTGTGGTGGACGGGTTTCT+TGG 0.361884 6:-99860722 MsG0680035159.01.T01:CDS
CAAAAGCAAATTACTAAATC+AGG 0.379085 6:-99860033 MsG0680035159.01.T01:intron
ACCTCTGAAGTTGGATTCAC+TGG 0.382853 6:-99860366 MsG0680035159.01.T01:CDS
AGAAACCCGTCCACCACAAT+TGG 0.392923 6:+99860443 None:intergenic
AAAATCCCGTCCTCAACAAT+TGG 0.403284 6:+99860584 None:intergenic
GGATTCCCATTCCAGAATAG+TGG 0.405142 6:-99859579 MsG0680035159.01.T01:CDS
CCCTGAATGTTAATAGTTGT+CGG 0.411844 6:-99860406 MsG0680035159.01.T01:CDS
AGAAACCCGTCCATCACAAT+TGG 0.428225 6:+99860302 None:intergenic
TTAATAGTTGTCGGAATCTC+AGG 0.433267 6:-99860397 MsG0680035159.01.T01:CDS
AACCATGCAGAGGTTGACTT+TGG 0.441129 6:-99859600 MsG0680035159.01.T01:CDS
GCCACAACTACTAACATTCA+AGG 0.453775 6:+99860688 None:intergenic
ACTCGTCTTGGATGATTGTA+AGG 0.456811 6:-99860135 MsG0680035159.01.T01:CDS
ACCTTGAATGTTAGTAGTTG+TGG 0.461091 6:-99860689 MsG0680035159.01.T01:CDS
TTCCTTCTGGTTTCGTAACA+AGG 0.467083 6:-99859829 MsG0680035159.01.T01:CDS
GGATTCCACTATTCTGGAAT+GGG 0.469832 6:+99859574 None:intergenic
CCGACAACTATTAACATTCA+GGG 0.474983 6:+99860406 None:intergenic
GCGACATCTACTAACATTCA+GGG 0.493428 6:+99860547 None:intergenic
GCGTTGTTTCTCCATTCACA+TGG 0.493527 6:-99859788 MsG0680035159.01.T01:CDS
TATGAATCATCCCATGTGAA+TGG 0.498623 6:+99859777 None:intergenic
TTATTGACAGGAATTACATA+AGG 0.501198 6:-99859934 MsG0680035159.01.T01:intron
GAGTATTCCACCTCTGAAGT+TGG 0.501531 6:-99860375 MsG0680035159.01.T01:CDS
GAGTATTCCACCTCTGAAGT+TGG 0.502236 6:-99860657 MsG0680035159.01.T01:CDS
GATTTCCAATTGTTGAGGAC+GGG 0.503842 6:-99860589 MsG0680035159.01.T01:CDS
CGAGAGATTTCCAATTGTTG+AGG 0.509785 6:-99860594 MsG0680035159.01.T01:CDS
TGACAGGAATTACATAAGGC+AGG 0.515553 6:-99859930 MsG0680035159.01.T01:intron
TGGATTCCACTATTCTGGAA+TGG 0.516706 6:+99859573 None:intergenic
ACAATGTTAGCATCATTCTC+TGG 0.535526 6:+99859509 None:intergenic
CACCCGTGGCAAACAAAACC+AGG 0.536968 6:+99859902 None:intergenic
AGATTTCCAATTGTTGAGGA+CGG 0.538838 6:-99860590 MsG0680035159.01.T01:CDS
AAGTATTCCACCTCTCAAGT+TGG 0.546870 6:-99860234 MsG0680035159.01.T01:CDS
GCAGATAACATTCTTAAGCA+TGG 0.550848 6:+99860086 None:intergenic
GAGTATTCCACCTCTCAAGT+TGG 0.563382 6:-99860516 MsG0680035159.01.T01:CDS
CGTTGTTTCTCCATTCACAT+GGG 0.566789 6:-99859787 MsG0680035159.01.T01:CDS
TACATAAGGCAGGAAACACC+TGG 0.568256 6:-99859920 MsG0680035159.01.T01:CDS
TTCGACCACATATATGAGGC+AGG 0.568359 6:-99859861 MsG0680035159.01.T01:CDS
ACAATCCTGCCTCATATATG+TGG 0.573593 6:+99859856 None:intergenic
TTGGAAAACTCTCAAGATTG+TGG 0.580491 6:+99860462 None:intergenic
AGCAAATCCAACTTGAGAGG+TGG 0.582346 6:+99860227 None:intergenic
AGAAACCCGTCCACCACAGT+AGG 0.588411 6:+99860725 None:intergenic
CAAGACTATGACAATATGAA+AGG 0.590463 6:+99860333 None:intergenic
TCAGAGGTGGAATACTCTTG+AGG 0.593682 6:+99860663 None:intergenic
GTGACAACTTTCAACACGCA+AGG 0.594940 6:+99860265 None:intergenic
CGAGACTATGACAATGTGAA+AGG 0.599406 6:+99860615 None:intergenic
TCTAGTGAATCCAACTTGAG+AGG 0.600859 6:+99860506 None:intergenic
TTAGTAGATGTCGCAATCTG+AGG 0.602881 6:-99860538 MsG0680035159.01.T01:CDS
TCTAGAGAATCCAACTTCAG+AGG 0.603298 6:+99860647 None:intergenic
TGGGTTATGGAAACTCGTCT+TGG 0.605720 6:-99860147 MsG0680035159.01.T01:CDS
CAAGACTATAACAACATGAA+AGG 0.607964 6:+99860192 None:intergenic
GCTGTAAGATTGATCATCAA+CGG 0.614309 6:-99859747 MsG0680035159.01.T01:CDS
TCTAGCAAATCCAACTTGAG+AGG 0.614339 6:+99860224 None:intergenic
AGTGAATCCAACTTGAGAGG+TGG 0.614389 6:+99860509 None:intergenic
AGTGAATCCAACTTCAGAGG+TGG 0.614973 6:+99860368 None:intergenic
ACAACGCAGAGAGCTATGTC+AGG 0.620100 6:+99859804 None:intergenic
TATATGTGGTCGAACCACTC+CGG 0.621119 6:+99859870 None:intergenic
GTGGTTCGACCACATATATG+AGG 0.623006 6:-99859865 MsG0680035159.01.T01:CDS
TCCAGTGAATCCAACTTCAG+AGG 0.625699 6:+99860365 None:intergenic
AGAGAATCCAACTTCAGAGG+TGG 0.626490 6:+99860650 None:intergenic
AACCTTGTTACGAAACCAGA+AGG 0.627969 6:+99859827 None:intergenic
ATCCAAAGTCAACCTCTGCA+TGG 0.635147 6:+99859598 None:intergenic
AAATAAGTGGAACCATGCAG+AGG 0.669955 6:-99859610 MsG0680035159.01.T01:CDS
GATAACATTCTTAAGCATGG+AGG 0.684124 6:+99860089 None:intergenic
TGATGATCAATCTTACAGCA+CGG 0.688589 6:+99859751 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTATATATTATTGAC+AGG - Chr6:99860381-99860400 MsG0680035159.01.T01:CDS 10.0%
!!! AAATTTTTATATTGGGAAAA+CGG - Chr6:99859524-99859543 MsG0680035159.01.T01:CDS 15.0%
!!! AATTTTTATATTGGGAAAAC+GGG - Chr6:99859525-99859544 MsG0680035159.01.T01:CDS 20.0%
! CAAAAGCAAATTACTAAATC+AGG - Chr6:99860294-99860313 MsG0680035159.01.T01:CDS 25.0%
! TTATTGACAGGAATTACATA+AGG - Chr6:99860393-99860412 MsG0680035159.01.T01:CDS 25.0%
!! AAATGATATGTATTTTGCTG+TGG + Chr6:99860637-99860656 None:intergenic 25.0%
!! ATTTTTATATTGGGAAAACG+GGG - Chr6:99859526-99859545 MsG0680035159.01.T01:CDS 25.0%
!! TACTTTTCTCTTTCAATACA+TGG + Chr6:99860777-99860796 None:intergenic 25.0%
!!! AAGCACTTTTAGAAAATAAG+TGG - Chr6:99860704-99860723 MsG0680035159.01.T01:CDS 25.0%
CAAGACTATAACAACATGAA+AGG + Chr6:99860138-99860157 None:intergenic 30.0%
CAAGACTATGACAATATGAA+AGG + Chr6:99859997-99860016 None:intergenic 30.0%
!! GCATCTTTTTCATTTGCAAA+TGG - Chr6:99860657-99860676 MsG0680035159.01.T01:CDS 30.0%
ACCTTGAATGTTAGTAGTTG+TGG - Chr6:99859638-99859657 MsG0680035159.01.T01:CDS 35.0%
AGATTTCCAATTGTTGAGGA+CGG - Chr6:99859737-99859756 MsG0680035159.01.T01:CDS 35.0%
ATACATGGATTCCACTATTC+TGG + Chr6:99860762-99860781 None:intergenic 35.0%
CCCTGAATGTTAATAGTTGT+CGG - Chr6:99859921-99859940 MsG0680035159.01.T01:CDS 35.0%
CCGACAACTATTAACATTCA+GGG + Chr6:99859924-99859943 None:intergenic 35.0%
GATAACATTCTTAAGCATGG+AGG + Chr6:99860241-99860260 None:intergenic 35.0%
GCAGATAACATTCTTAAGCA+TGG + Chr6:99860244-99860263 None:intergenic 35.0%
GCTGTAAGATTGATCATCAA+CGG - Chr6:99860580-99860599 MsG0680035159.01.T01:CDS 35.0%
TATGAATCATCCCATGTGAA+TGG + Chr6:99860553-99860572 None:intergenic 35.0%
TCCGACAACTATTAACATTC+AGG + Chr6:99859925-99859944 None:intergenic 35.0%
TGATGATCAATCTTACAGCA+CGG + Chr6:99860579-99860598 None:intergenic 35.0%
TTAATAGTTGTCGGAATCTC+AGG - Chr6:99859930-99859949 MsG0680035159.01.T01:intron 35.0%
TTGGAAAACTCTCAAGATTG+TGG + Chr6:99859868-99859887 None:intergenic 35.0%
! TCTTGAGAGTTTTCCAATTG+TGG - Chr6:99859871-99859890 MsG0680035159.01.T01:CDS 35.0%
! TCTTGAGAGTTTTTCACTTG+TGG - Chr6:99860153-99860172 MsG0680035159.01.T01:CDS 35.0%
! TGAGAGTTTTCCAATTGTGA+TGG - Chr6:99860015-99860034 MsG0680035159.01.T01:intron 35.0%
!! AGTTTTCCAATTGTGATGGA+CGG - Chr6:99860019-99860038 MsG0680035159.01.T01:intron 35.0%
AAAATCCCGTCCTCAACAAT+TGG + Chr6:99859746-99859765 None:intergenic 40.0%
AAATAAGTGGAACCATGCAG+AGG - Chr6:99860717-99860736 MsG0680035159.01.T01:CDS 40.0%
AACCTTGTTACGAAACCAGA+AGG + Chr6:99860503-99860522 None:intergenic 40.0%
AAGTATTCCACCTCTCAAGT+TGG - Chr6:99860093-99860112 MsG0680035159.01.T01:CDS 40.0%
ACAATCCTGCCTCATATATG+TGG + Chr6:99860474-99860493 None:intergenic 40.0%
ACTCGTCTTGGATGATTGTA+AGG - Chr6:99860192-99860211 MsG0680035159.01.T01:CDS 40.0%
CAGGATTGTCAATTTCCTTC+TGG - Chr6:99860485-99860504 MsG0680035159.01.T01:CDS 40.0%
CGAGACTATGACAATGTGAA+AGG + Chr6:99859715-99859734 None:intergenic 40.0%
CGAGAGATTTCCAATTGTTG+AGG - Chr6:99859733-99859752 MsG0680035159.01.T01:CDS 40.0%
GATTTCCAATTGTTGAGGAC+GGG - Chr6:99859738-99859757 MsG0680035159.01.T01:CDS 40.0%
GCCACAACTACTAACATTCA+AGG + Chr6:99859642-99859661 None:intergenic 40.0%
GCGACATCTACTAACATTCA+GGG + Chr6:99859783-99859802 None:intergenic 40.0%
GGATGATTGTAAGGAACTTC+AGG - Chr6:99860201-99860220 MsG0680035159.01.T01:CDS 40.0%
TCTAGAGAATCCAACTTCAG+AGG + Chr6:99859683-99859702 None:intergenic 40.0%
TCTAGCAAATCCAACTTGAG+AGG + Chr6:99860106-99860125 None:intergenic 40.0%
TCTAGTGAATCCAACTTGAG+AGG + Chr6:99859824-99859843 None:intergenic 40.0%
TGACAGGAATTACATAAGGC+AGG - Chr6:99860397-99860416 MsG0680035159.01.T01:CDS 40.0%
TGCGACATCTACTAACATTC+AGG + Chr6:99859784-99859803 None:intergenic 40.0%
TTAGTAGATGTCGCAATCTG+AGG - Chr6:99859789-99859808 MsG0680035159.01.T01:CDS 40.0%
! ATTGTTGAGGACGGGATTTT+TGG - Chr6:99859746-99859765 MsG0680035159.01.T01:CDS 40.0%
! TCTTGAGAGTTTTCCTACTG+TGG - Chr6:99859589-99859608 MsG0680035159.01.T01:CDS 40.0%
! TGAGAGTTTTCCAATTGTGG+TGG - Chr6:99859874-99859893 MsG0680035159.01.T01:CDS 40.0%
! TGAGAGTTTTTCACTTGTGG+TGG - Chr6:99860156-99860175 MsG0680035159.01.T01:CDS 40.0%
! TGGATTCCACTATTCTGGAA+TGG + Chr6:99860757-99860776 None:intergenic 40.0%
!! AGTTTTCCAATTGTGGTGGA+CGG - Chr6:99859878-99859897 MsG0680035159.01.T01:CDS 40.0%
!! AGTTTTTCACTTGTGGTGGA+TGG - Chr6:99860160-99860179 MsG0680035159.01.T01:CDS 40.0%
!! CGTTGTTTCTCCATTCACAT+GGG - Chr6:99860540-99860559 MsG0680035159.01.T01:CDS 40.0%
!! GGATTCCACTATTCTGGAAT+GGG + Chr6:99860756-99860775 None:intergenic 40.0%
!! TTCCTTCTGGTTTCGTAACA+AGG - Chr6:99860498-99860517 MsG0680035159.01.T01:CDS 40.0%
!!! GTTTTCCAATTGTGATGGAC+GGG - Chr6:99860020-99860039 MsG0680035159.01.T01:intron 40.0%
!!! GTTTTTCACTTGTGGTGGAT+GGG - Chr6:99860161-99860180 MsG0680035159.01.T01:CDS 40.0%
AGAAACCCGTCCATCACAAT+TGG + Chr6:99860028-99860047 None:intergenic 45.0%
AGAGAATCCAACTTCAGAGG+TGG + Chr6:99859680-99859699 None:intergenic 45.0%
AGCAAATCCAACTTGAGAGG+TGG + Chr6:99860103-99860122 None:intergenic 45.0%
AGTGAATCCAACTTCAGAGG+TGG + Chr6:99859962-99859981 None:intergenic 45.0%
AGTGAATCCAACTTGAGAGG+TGG + Chr6:99859821-99859840 None:intergenic 45.0%
ATCCAAAGTCAACCTCTGCA+TGG + Chr6:99860732-99860751 None:intergenic 45.0%
GAGTATTCCACCTCTCAAGT+TGG - Chr6:99859811-99859830 MsG0680035159.01.T01:CDS 45.0%
GGATTCCCATTCCAGAATAG+TGG - Chr6:99860748-99860767 MsG0680035159.01.T01:CDS 45.0%
GTGACAACTTTCAACACGCA+AGG + Chr6:99860065-99860084 None:intergenic 45.0%
GTGGTTCGACCACATATATG+AGG - Chr6:99860462-99860481 MsG0680035159.01.T01:CDS 45.0%
TACATAAGGCAGGAAACACC+TGG - Chr6:99860407-99860426 MsG0680035159.01.T01:CDS 45.0%
TATATGTGGTCGAACCACTC+CGG + Chr6:99860460-99860479 None:intergenic 45.0%
TCAGAGGTGGAATACTCTTG+AGG + Chr6:99859667-99859686 None:intergenic 45.0%
TCCAGTGAATCCAACTTCAG+AGG + Chr6:99859965-99859984 None:intergenic 45.0%
TGGGTTATGGAAACTCGTCT+TGG - Chr6:99860180-99860199 MsG0680035159.01.T01:CDS 45.0%
TTCGACCACATATATGAGGC+AGG - Chr6:99860466-99860485 MsG0680035159.01.T01:CDS 45.0%
! AACCATGCAGAGGTTGACTT+TGG - Chr6:99860727-99860746 MsG0680035159.01.T01:CDS 45.0%
! TCGAACCACTCCGGAATTTT+TGG + Chr6:99860451-99860470 None:intergenic 45.0%
! TGAGAGTTTTCCTACTGTGG+TGG - Chr6:99859592-99859611 MsG0680035159.01.T01:CDS 45.0%
!! ACCTCTGAAGTTGGATTCAC+TGG - Chr6:99859961-99859980 MsG0680035159.01.T01:intron 45.0%
!! AGTTTTCCTACTGTGGTGGA+CGG - Chr6:99859596-99859615 MsG0680035159.01.T01:CDS 45.0%
!! ATTGTGATGGACGGGTTTCT+TGG - Chr6:99860028-99860047 MsG0680035159.01.T01:intron 45.0%
!! GAGTATTCCACCTCTGAAGT+TGG - Chr6:99859670-99859689 MsG0680035159.01.T01:CDS 45.0%
!! GCGTTGTTTCTCCATTCACA+TGG - Chr6:99860539-99860558 MsG0680035159.01.T01:CDS 45.0%
!!! ACACCTGGTTTTGTTTGCCA+CGG - Chr6:99860422-99860441 MsG0680035159.01.T01:CDS 45.0%
!!! GTTTTCCAATTGTGGTGGAC+GGG - Chr6:99859879-99859898 MsG0680035159.01.T01:CDS 45.0%
ACAACGCAGAGAGCTATGTC+AGG + Chr6:99860526-99860545 None:intergenic 50.0%
AGAAACCCGTCCACCACAAT+TGG + Chr6:99859887-99859906 None:intergenic 50.0%
!! ATTGTGGTGGACGGGTTTCT+TGG - Chr6:99859887-99859906 MsG0680035159.01.T01:CDS 50.0%
!! CACTTGTGGTGGATGGGTTA+TGG - Chr6:99860167-99860186 MsG0680035159.01.T01:CDS 50.0%
!!! CACCTGGTTTTGTTTGCCAC+GGG - Chr6:99860423-99860442 MsG0680035159.01.T01:CDS 50.0%
!!! GTTTTCCTACTGTGGTGGAC+GGG - Chr6:99859597-99859616 MsG0680035159.01.T01:CDS 50.0%
AGAAACCCGTCCACCACAGT+AGG + Chr6:99859605-99859624 None:intergenic 55.0%
CACCCGTGGCAAACAAAACC+AGG + Chr6:99860428-99860447 None:intergenic 55.0%
GCCACGGGTGCCAAAAATTC+CGG - Chr6:99860438-99860457 MsG0680035159.01.T01:CDS 55.0%
GGGTGCCAAAAATTCCGGAG+TGG - Chr6:99860443-99860462 MsG0680035159.01.T01:CDS 55.0%
!! ACTGTGGTGGACGGGTTTCT+TGG - Chr6:99859605-99859624 MsG0680035159.01.T01:CDS 55.0%
!!! TCCGGAATTTTTGGCACCCG+TGG + Chr6:99860442-99860461 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr6 gene 99859521 99860828 99859521 ID=MsG0680035159.01;Name=MsG0680035159.01
Chr6 mRNA 99859521 99860828 99859521 ID=MsG0680035159.01.T01;Parent=MsG0680035159.01;Name=MsG0680035159.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|1|2|0|406
Chr6 exon 99860034 99860828 99860034 ID=MsG0680035159.01.T01:exon:10118;Parent=MsG0680035159.01.T01
Chr6 exon 99859521 99859946 99859521 ID=MsG0680035159.01.T01:exon:10117;Parent=MsG0680035159.01.T01
Chr6 CDS 99860034 99860828 99860034 ID=MsG0680035159.01.T01:cds;Parent=MsG0680035159.01.T01
Chr6 CDS 99859521 99859946 99859521 ID=MsG0680035159.01.T01:cds;Parent=MsG0680035159.01.T01
Gene Sequence

>MsG0680035159.01.T01

ATGAAATTTTTATATTGGGAAAACGGGGTGTTACAACTAGAAACACTCAACTTTTCACATTGTCATAGTCTTGAGAGTTTTCCTACTGTGGTGGACGGGTTTCTTGGAAAACTTAAAACCTTGAATGTTAGTAGTTGTGGCAACCTCAAGAGTATTCCACCTCTGAAGTTGGATTCTCTAGAAACACTTGACCTTTCACATTGTCATAGTCTCGAGAGATTTCCAATTGTTGAGGACGGGATTTTTGGAAAACTTAAAACCCTGAATGTTAGTAGATGTCGCAATCTGAGGAGTATTCCACCTCTCAAGTTGGATTCACTAGAAACTCTTGACTTTTCACATTGCCACAATCTTGAGAGTTTTCCAATTGTGGTGGACGGGTTTCTTGGAAAACTTAAAACCCTGAATGTTAATAGTTGTCGGAATCTCAGGAGTATTCCACCTCTGAAGTTGGATTCACTGGAGACATTTGACCTTTCATATTGTCATAGTCTTGAGAGTTTTCCAATTGTGATGGACGGGTTTCTTGGAAAACTTAAAACCTTGCGTGTTGAAAGTTGTCACAATCTCAAAAGTATTCCACCTCTCAAGTTGGATTTGCTAGAAACACTTGACCTTTCATGTTGTTATAGTCTTGAGAGTTTTTCACTTGTGGTGGATGGGTTATGGAAACTCGTCTTGGATGATTGTAAGGAACTTCAGGAAATTAAAGTGATTCCTCCATGCTTAAGAATGTTATCTGCAGTAAACTGCATGTCGTTGACTTCGTTGTGCAAAAGCAAATTACTAAATCAGGAATTACATAAGGCAGGAAACACCTGGTTTTGTTTGCCACGGGTGCCAAAAATTCCGGAGTGGTTCGACCACATATATGAGGCAGGATTGTCAATTTCCTTCTGGTTTCGTAACAAGGTTCCTGACATAGCTCTCTGCGTTGTTTCTCCATTCACATGGGATGATTCATATTACCGTGCTGTAAGATTGATCATCAACGGCAATACATTTTTCTATACAGATGATATAAAACCACAGCAAAATACATATCATTTGCATCTTTTTCATTTGCAAATGGAAAATTTCAATGATAATATAGACAAAGCACTTTTAGAAAATAAGTGGAACCATGCAGAGGTTGACTTTGGATTCCCATTCCAGAATAGTGGAATCCATGTATTGAAAGAGAAAAGTAACATGAAAGATATTCAATTCACCAGAGAATGA

Protein sequence

>MsG0680035159.01.T01

MKFLYWENGVLQLETLNFSHCHSLESFPTVVDGFLGKLKTLNVSSCGNLKSIPPLKLDSLETLDLSHCHSLERFPIVEDGIFGKLKTLNVSRCRNLRSIPPLKLDSLETLDFSHCHNLESFPIVVDGFLGKLKTLNVNSCRNLRSIPPLKLDSLETFDLSYCHSLESFPIVMDGFLGKLKTLRVESCHNLKSIPPLKLDLLETLDLSCCYSLESFSLVVDGLWKLVLDDCKELQEIKVIPPCLRMLSAVNCMSLTSLCKSKLLNQELHKAGNTWFCLPRVPKIPEWFDHIYEAGLSISFWFRNKVPDIALCVVSPFTWDDSYYRAVRLIINGNTFFYTDDIKPQQNTYHLHLFHLQMENFNDNIDKALLENKWNHAEVDFGFPFQNSGIHVLKEKSNMKDIQFTRE*