AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035655.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 67 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATTTCGTTAATGAAATT+TGG 0.142388 6:-110087870 MsG0680035655.01.T01:CDS
TCTGACATCATATAGGTTTC+TGG 0.256188 6:+110088303 None:intergenic
TAAATGAATAATTTGATGTT+TGG 0.267068 6:+110088073 None:intergenic
ATGTGATTGGTCTGGGTAAT+TGG 0.284840 6:+110088017 None:intergenic
TGGGGATGGTTTACAATGTT+TGG 0.285808 6:+110087967 None:intergenic
TTGAGGTGTGTAGTTTGTTT+GGG 0.300721 6:+110087948 None:intergenic
AAATGAATAATTTGATGTTT+GGG 0.308165 6:+110088074 None:intergenic
ATTGAGGTGTGTAGTTTGTT+TGG 0.330142 6:+110087947 None:intergenic
GAGATTGTTAAACATTCTTT+AGG 0.333388 6:-110089433 MsG0680035655.01.T01:CDS
GAGTAGCTTCGATATGAAAT+TGG 0.339656 6:+110088123 None:intergenic
ATCCTTGGTTTAAAGATTAA+CGG 0.359169 6:-110089490 MsG0680035655.01.T01:CDS
GGTCTGGGTAATTGGTTTGT+GGG 0.359356 6:+110088025 None:intergenic
TCATGATGAGGAGGTGGAAG+AGG 0.377763 6:-110087788 MsG0680035655.01.T01:CDS
TGGTCTGGGTAATTGGTTTG+TGG 0.378493 6:+110088024 None:intergenic
GTTTGCATCTGACATCATAT+AGG 0.387497 6:+110088296 None:intergenic
AGTACAAAATGAGGTGACTA+TGG 0.388211 6:-110087830 MsG0680035655.01.T01:CDS
ATCATGAATATCAGCATCAT+TGG 0.388655 6:+110087804 None:intergenic
GATTTCTAAAGAAGCACTAT+TGG 0.393759 6:-110088388 MsG0680035655.01.T01:CDS
AGTTCGGTTGTAGTTGTAGT+TGG 0.399145 6:+110088191 None:intergenic
TCGTCCCGCTTAGCCTTCAA+TGG 0.400090 6:+110089403 None:intergenic
CAATGTTTGGAGGGGTTGGT+AGG 0.424363 6:+110087980 None:intergenic
GAGAAGTAATGTGATTGGTC+TGG 0.431404 6:+110088009 None:intergenic
CTTTCTATAGTATTAGTTTG+TGG 0.435924 6:+110087916 None:intergenic
TCATGGGATGTGGTGGAGAT+TGG 0.441299 6:+110088166 None:intergenic
TTTAGGAAGTATGCCATTGA+AGG 0.441905 6:-110089416 MsG0680035655.01.T01:CDS
CCGATCTAATAGAAGTATCA+TGG 0.446536 6:-110089456 MsG0680035655.01.T01:CDS
AAAGCTTTGGTAAAAGTAAG+TGG 0.454221 6:+110088224 None:intergenic
ACTTCTATTAGATCGGTAAC+TGG 0.466341 6:+110089463 None:intergenic
GTGGTGGAGATTGGTAAGTT+CGG 0.468605 6:+110088175 None:intergenic
GTGTGTAGTTTGTTTGGGGA+TGG 0.473395 6:+110087953 None:intergenic
AGGTGTAATGAATTGGTTGT+TGG 0.481662 6:+110088251 None:intergenic
GTCTGGGTAATTGGTTTGTG+GGG 0.482351 6:+110088026 None:intergenic
TGGTGGATGAGTTAAAGCTT+TGG 0.483285 6:+110088211 None:intergenic
GTTTGTGGGGTATTCTGAGT+TGG 0.483546 6:+110088039 None:intergenic
AGAAGTAATGTGATTGGTCT+GGG 0.484911 6:+110088010 None:intergenic
GAAGACGTTCATATGATCCT+TGG 0.486666 6:-110089505 None:intergenic
TCGGTTGTAGTTGTAGTTGG+TGG 0.497891 6:+110088194 None:intergenic
TTTACAATGTTTGGAGGGGT+TGG 0.500362 6:+110087976 None:intergenic
TGGGTGGAGGTGTAATGAAT+TGG 0.500378 6:+110088244 None:intergenic
AGCACTATTGGCAAACTCAA+TGG 0.508383 6:-110088376 MsG0680035655.01.T01:CDS
TATGCCATTGAAGGCTAAGC+GGG 0.515658 6:-110089407 MsG0680035655.01.T01:CDS
GGATGGTTTACAATGTTTGG+AGG 0.521121 6:+110087970 None:intergenic
CCATGATACTTCTATTAGAT+CGG 0.523125 6:+110089456 None:intergenic
GATGGTTTACAATGTTTGGA+GGG 0.532470 6:+110087971 None:intergenic
TGAACGAGAAGTAATGTGAT+TGG 0.535828 6:+110088004 None:intergenic
TACTCTCAACATAGTCATCA+TGG 0.542962 6:-110088105 MsG0680035655.01.T01:CDS
ATATAGGTTTCTGGTGCTGT+AGG 0.549123 6:+110088312 None:intergenic
TGTTCCACAAGTACAAAATG+AGG 0.551387 6:-110087839 MsG0680035655.01.T01:CDS
AAACAAACTACACACCTCAA+TGG 0.559211 6:-110087945 MsG0680035655.01.T01:CDS
AAGCTTTGGTAAAAGTAAGT+GGG 0.563290 6:+110088225 None:intergenic
TGGTAAAAGTAAGTGGGTGG+AGG 0.566995 6:+110088231 None:intergenic
AAGAATTGGTTCATGGGATG+TGG 0.568341 6:+110088156 None:intergenic
ATGGTTTACAATGTTTGGAG+GGG 0.570919 6:+110087972 None:intergenic
CGATCTAATAGAAGTATCAT+GGG 0.576603 6:-110089455 MsG0680035655.01.T01:CDS
ATGAATTGGTTGTTGGATGG+AGG 0.584926 6:+110088258 None:intergenic
GTAATGAATTGGTTGTTGGA+TGG 0.585609 6:+110088255 None:intergenic
CACCGTTAATCTTTAAACCA+AGG 0.586337 6:+110089488 None:intergenic
TGAGGTGTGTAGTTTGTTTG+GGG 0.598081 6:+110087949 None:intergenic
AATTGGTTCATGGGATGTGG+TGG 0.599322 6:+110088159 None:intergenic
GTTTGTGGATGTGACCATTG+AGG 0.604676 6:+110087931 None:intergenic
TGATATTCATGATGAGGAGG+TGG 0.633777 6:-110087794 MsG0680035655.01.T01:CDS
CTTTGGTAAAAGTAAGTGGG+TGG 0.633821 6:+110088228 None:intergenic
TGCTGATATTCATGATGAGG+AGG 0.659140 6:-110087797 MsG0680035655.01.T01:CDS
TGATGCTGATATTCATGATG+AGG 0.669986 6:-110087800 MsG0680035655.01.T01:CDS
GTATGCCATTGAAGGCTAAG+CGG 0.686459 6:-110089408 MsG0680035655.01.T01:CDS
GGTGCTGTAGGATAGTCTGA+CGG 0.696401 6:+110088324 None:intergenic
TGATGTCAGATGCAAACATG+TGG 0.746001 6:-110088290 MsG0680035655.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATTTTAAAAATAATTAGA+TGG - Chr6:110088344-110088363 MsG0680035655.01.T01:CDS 10.0%
!! AAATGAATAATTTGATGTTT+GGG + Chr6:110089202-110089221 None:intergenic 15.0%
!! TAAATGAATAATTTGATGTT+TGG + Chr6:110089203-110089222 None:intergenic 15.0%
!! AATGTTCTAATTAATACACT+TGG + Chr6:110088329-110088348 None:intergenic 20.0%
!! ATGATTTCGTTAATGAAATT+TGG - Chr6:110089403-110089422 MsG0680035655.01.T01:CDS 20.0%
!! TAAACAAATATTGAACTGTA+GGG + Chr6:110087956-110087975 None:intergenic 20.0%
!! TTGACAAACACAAAAATAAA+AGG - Chr6:110088715-110088734 MsG0680035655.01.T01:intron 20.0%
!!! AAACATTATATCAAAGGTAT+TGG - Chr6:110087918-110087937 MsG0680035655.01.T01:CDS 20.0%
! AAAATAATTAGATGGCTAGA+AGG - Chr6:110088352-110088371 MsG0680035655.01.T01:CDS 25.0%
! AAACAAATATTGAACTGTAG+GGG + Chr6:110087955-110087974 None:intergenic 25.0%
! ACAAGGTTGCAAATATAATT+AGG + Chr6:110088017-110088036 None:intergenic 25.0%
! ATCCTTGGTTTAAAGATTAA+CGG - Chr6:110087783-110087802 MsG0680035655.01.T01:CDS 25.0%
! CATTCAAAATATTGACGATT+CGG + Chr6:110088835-110088854 None:intergenic 25.0%
! CTAAACAAATATTGAACTGT+AGG + Chr6:110087957-110087976 None:intergenic 25.0%
! GAGATTGTTAAACATTCTTT+AGG - Chr6:110087840-110087859 MsG0680035655.01.T01:CDS 25.0%
! GTAAATTTATCGAAAATCCT+CGG - Chr6:110088380-110088399 MsG0680035655.01.T01:CDS 25.0%
! TAGCTCAAACATTATATCAA+AGG - Chr6:110087912-110087931 MsG0680035655.01.T01:CDS 25.0%
! TTAACTTTCATATTTGCCAA+CGG + Chr6:110088267-110088286 None:intergenic 25.0%
! TTGAAATCTTTCATATCATC+TGG + Chr6:110088685-110088704 None:intergenic 25.0%
!! CTTTCTATAGTATTAGTTTG+TGG + Chr6:110089360-110089379 None:intergenic 25.0%
!!! GTCAATATTTTGAATGGTAT+TGG - Chr6:110088839-110088858 MsG0680035655.01.T01:intron 25.0%
!!! TTTTGTAAGAATTGGTTCAT+GGG + Chr6:110089126-110089145 None:intergenic 25.0%
AATCTTTCATATCATCTGGT+AGG + Chr6:110088681-110088700 None:intergenic 30.0%
ATCATGAATATCAGCATCAT+TGG + Chr6:110089472-110089491 None:intergenic 30.0%
ATCTTTCATATCATCTGGTA+GGG + Chr6:110088680-110088699 None:intergenic 30.0%
ATGTGTTTACATACCATATC+TGG + Chr6:110088576-110088595 None:intergenic 30.0%
CCATGATACTTCTATTAGAT+CGG + Chr6:110087820-110087839 None:intergenic 30.0%
CTGTGTGATATTGCAATATA+TGG - Chr6:110088131-110088150 MsG0680035655.01.T01:CDS 30.0%
GTTAGTTAAATCACCATAAG+AGG - Chr6:110088058-110088077 MsG0680035655.01.T01:CDS 30.0%
! AAAGCTTTGGTAAAAGTAAG+TGG + Chr6:110089052-110089071 None:intergenic 30.0%
! AAGCTTTGGTAAAAGTAAGT+GGG + Chr6:110089051-110089070 None:intergenic 30.0%
! CAATAGAACTGTTTAAAACG+AGG + Chr6:110088511-110088530 None:intergenic 30.0%
!! CGAATCGTCAATATTTTGAA+TGG - Chr6:110088833-110088852 MsG0680035655.01.T01:intron 30.0%
!! CGATCTAATAGAAGTATCAT+GGG - Chr6:110087818-110087837 MsG0680035655.01.T01:CDS 30.0%
!! CTCGTTTTAAACAGTTCTAT+TGG - Chr6:110088509-110088528 MsG0680035655.01.T01:intron 30.0%
!! GATTTCTAAAGAAGCACTAT+TGG - Chr6:110088885-110088904 MsG0680035655.01.T01:intron 30.0%
!! GTTTTAAACAGTTCTATTGG+AGG - Chr6:110088512-110088531 MsG0680035655.01.T01:intron 30.0%
!! GTTTTGTAAGAATTGGTTCA+TGG + Chr6:110089127-110089146 None:intergenic 30.0%
!! TTGGAGAGTTTTGTAAGAAT+TGG + Chr6:110089134-110089153 None:intergenic 30.0%
!!! ACTTTTTTTGAGATCGTATG+TGG - Chr6:110088863-110088882 MsG0680035655.01.T01:intron 30.0%
AAACAAACTACACACCTCAA+TGG - Chr6:110089328-110089347 MsG0680035655.01.T01:intron 35.0%
ACAAAAATAAAAGGCTCGTG+GGG - Chr6:110088724-110088743 MsG0680035655.01.T01:intron 35.0%
ACACAAAAATAAAAGGCTCG+TGG - Chr6:110088722-110088741 MsG0680035655.01.T01:intron 35.0%
ACCACCATTTCAAATGTACA+AGG + Chr6:110088034-110088053 None:intergenic 35.0%
ACTTCTATTAGATCGGTAAC+TGG + Chr6:110087813-110087832 None:intergenic 35.0%
AGGTGTAATGAATTGGTTGT+TGG + Chr6:110089025-110089044 None:intergenic 35.0%
AGTACAAAATGAGGTGACTA+TGG - Chr6:110089443-110089462 MsG0680035655.01.T01:CDS 35.0%
ATAATTAGATGGCTAGAAGG+TGG - Chr6:110088355-110088374 MsG0680035655.01.T01:CDS 35.0%
ATGGTTTACAATGTTTGGAG+GGG + Chr6:110089304-110089323 None:intergenic 35.0%
CACAAAAATAAAAGGCTCGT+GGG - Chr6:110088723-110088742 MsG0680035655.01.T01:intron 35.0%
CACCGTTAATCTTTAAACCA+AGG + Chr6:110087788-110087807 None:intergenic 35.0%
GAGTAGCTTCGATATGAAAT+TGG + Chr6:110089153-110089172 None:intergenic 35.0%
GATGGTTTACAATGTTTGGA+GGG + Chr6:110089305-110089324 None:intergenic 35.0%
GCAACCTTGTACATTTGAAA+TGG - Chr6:110088027-110088046 MsG0680035655.01.T01:CDS 35.0%
GCTTATGTCTTATACCTGTT+AGG - Chr6:110087978-110087997 MsG0680035655.01.T01:CDS 35.0%
GTAATGAATTGGTTGTTGGA+TGG + Chr6:110089021-110089040 None:intergenic 35.0%
GTCAAAACATGATTATACCG+AGG + Chr6:110088400-110088419 None:intergenic 35.0%
GTTAAATCACCATAAGAGGT+TGG - Chr6:110088062-110088081 MsG0680035655.01.T01:CDS 35.0%
GTTTGCATCTGACATCATAT+AGG + Chr6:110088980-110088999 None:intergenic 35.0%
TAATTAGATGGCTAGAAGGT+GGG - Chr6:110088356-110088375 MsG0680035655.01.T01:CDS 35.0%
TACTCTCAACATAGTCATCA+TGG - Chr6:110089168-110089187 MsG0680035655.01.T01:intron 35.0%
TCCAGTATCATATCCAAAAG+TGG - Chr6:110088755-110088774 MsG0680035655.01.T01:intron 35.0%
TCTGACATCATATAGGTTTC+TGG + Chr6:110088973-110088992 None:intergenic 35.0%
TGAACGAGAAGTAATGTGAT+TGG + Chr6:110089272-110089291 None:intergenic 35.0%
TGATGCTGATATTCATGATG+AGG - Chr6:110089473-110089492 MsG0680035655.01.T01:CDS 35.0%
TGTTCCACAAGTACAAAATG+AGG - Chr6:110089434-110089453 MsG0680035655.01.T01:CDS 35.0%
TTTCTTCTTCGTTGGTGTAA+TGG + Chr6:110088552-110088571 None:intergenic 35.0%
! ACCTTGTACATTTGAAATGG+TGG - Chr6:110088030-110088049 MsG0680035655.01.T01:CDS 35.0%
! TTTAGGAAGTATGCCATTGA+AGG - Chr6:110087857-110087876 MsG0680035655.01.T01:CDS 35.0%
!! AGAAGTAATGTGATTGGTCT+GGG + Chr6:110089266-110089285 None:intergenic 35.0%
!! ATCAAAGGTATTGGTATGAC+AGG - Chr6:110087927-110087946 MsG0680035655.01.T01:CDS 35.0%
!! ATTGAGGTGTGTAGTTTGTT+TGG + Chr6:110089329-110089348 None:intergenic 35.0%
!! CCGATCTAATAGAAGTATCA+TGG - Chr6:110087817-110087836 MsG0680035655.01.T01:CDS 35.0%
!! TCCACTTTTGGATATGATAC+TGG + Chr6:110088759-110088778 None:intergenic 35.0%
!! TTGAGGTGTGTAGTTTGTTT+GGG + Chr6:110089328-110089347 None:intergenic 35.0%
ACGAAGAAGAAAGCCAGATA+TGG - Chr6:110088560-110088579 MsG0680035655.01.T01:intron 40.0%
ACTTTCATATTTGCCAACGG+AGG + Chr6:110088264-110088283 None:intergenic 40.0%
AGCACTATTGGCAAACTCAA+TGG - Chr6:110088897-110088916 MsG0680035655.01.T01:intron 40.0%
AGTTCGGTTGTAGTTGTAGT+TGG + Chr6:110089085-110089104 None:intergenic 40.0%
ATGAATTGGTTGTTGGATGG+AGG + Chr6:110089018-110089037 None:intergenic 40.0%
CACAATACTCTTACAGGCAT+AGG - Chr6:110088176-110088195 MsG0680035655.01.T01:CDS 40.0%
CTGTATTGTCCAACCTCTTA+TGG + Chr6:110088074-110088093 None:intergenic 40.0%
CTTTGGTAAAAGTAAGTGGG+TGG + Chr6:110089048-110089067 None:intergenic 40.0%
GGATGGTTTACAATGTTTGG+AGG + Chr6:110089306-110089325 None:intergenic 40.0%
GTCGAAAGACATCAGACATA+TGG - Chr6:110088616-110088635 MsG0680035655.01.T01:intron 40.0%
TGATATTCATGATGAGGAGG+TGG - Chr6:110089479-110089498 MsG0680035655.01.T01:CDS 40.0%
TGATGTCAGATGCAAACATG+TGG - Chr6:110088983-110089002 MsG0680035655.01.T01:intron 40.0%
TGCTGATATTCATGATGAGG+AGG - Chr6:110089476-110089495 MsG0680035655.01.T01:CDS 40.0%
TGGGGATGGTTTACAATGTT+TGG + Chr6:110089309-110089328 None:intergenic 40.0%
TTTACAATGTTTGGAGGGGT+TGG + Chr6:110089300-110089319 None:intergenic 40.0%
! AAGAATTGGTTCATGGGATG+TGG + Chr6:110089120-110089139 None:intergenic 40.0%
! GAGAAGTAATGTGATTGGTC+TGG + Chr6:110089267-110089286 None:intergenic 40.0%
! GTCACCTCATTTTGTACTTG+TGG + Chr6:110089441-110089460 None:intergenic 40.0%
! GTGTAATGGAAGTGGAGATA+GGG + Chr6:110088538-110088557 None:intergenic 40.0%
! TGGTGGATGAGTTAAAGCTT+TGG + Chr6:110089065-110089084 None:intergenic 40.0%
!! ATATAGGTTTCTGGTGCTGT+AGG + Chr6:110088964-110088983 None:intergenic 40.0%
!! ATGTGATTGGTCTGGGTAAT+TGG + Chr6:110089259-110089278 None:intergenic 40.0%
!! TATCTGGCTTTCTTCTTCGT+TGG + Chr6:110088560-110088579 None:intergenic 40.0%
!! TGAGGTGTGTAGTTTGTTTG+GGG + Chr6:110089327-110089346 None:intergenic 40.0%
ATGGCGCTAATGAAATGCCT+GGG - Chr6:110088150-110088169 MsG0680035655.01.T01:CDS 45.0%
CGGAGTCTGATATAACCAAG+AGG - Chr6:110088804-110088823 MsG0680035655.01.T01:intron 45.0%
CGTCATCTGTTAGCACTAGA+CGG - Chr6:110088784-110088803 MsG0680035655.01.T01:intron 45.0%
CTAGTGCTAACAGATGACGT+TGG + Chr6:110088783-110088802 None:intergenic 45.0%
GAGGTTGGACAATACAGTTG+AGG - Chr6:110088077-110088096 MsG0680035655.01.T01:CDS 45.0%
GCATTAAACGAGTGCCTAAC+AGG + Chr6:110087995-110088014 None:intergenic 45.0%
GTATGCCATTGAAGGCTAAG+CGG - Chr6:110087865-110087884 MsG0680035655.01.T01:CDS 45.0%
GTTGTGTTTCAGCTTGTGGT+GGG + Chr6:110088242-110088261 None:intergenic 45.0%
GTTTGTGGATGTGACCATTG+AGG + Chr6:110089345-110089364 None:intergenic 45.0%
TACTCTTACAGGCATAGGCA+TGG - Chr6:110088181-110088200 MsG0680035655.01.T01:CDS 45.0%
TATGCCATTGAAGGCTAAGC+GGG - Chr6:110087866-110087885 MsG0680035655.01.T01:CDS 45.0%
TATGGCGCTAATGAAATGCC+TGG - Chr6:110088149-110088168 MsG0680035655.01.T01:CDS 45.0%
TCGGTTGTAGTTGTAGTTGG+TGG + Chr6:110089082-110089101 None:intergenic 45.0%
TGGTAAAAGTAAGTGGGTGG+AGG + Chr6:110089045-110089064 None:intergenic 45.0%
TTCATATCATCTGGTAGGGC+AGG + Chr6:110088676-110088695 None:intergenic 45.0%
! AATTGGTTCATGGGATGTGG+TGG + Chr6:110089117-110089136 None:intergenic 45.0%
! CAGTTGAGGTTCAGCTTGTT+TGG - Chr6:110088091-110088110 MsG0680035655.01.T01:CDS 45.0%
! CTTCGTTGGTGTAATGGAAG+TGG + Chr6:110088546-110088565 None:intergenic 45.0%
! GGTGTAATGGAAGTGGAGAT+AGG + Chr6:110088539-110088558 None:intergenic 45.0%
! GTGGTGGAGATTGGTAAGTT+CGG + Chr6:110089101-110089120 None:intergenic 45.0%
! GTTTGTGGGGTATTCTGAGT+TGG + Chr6:110089237-110089256 None:intergenic 45.0%
! TGGGTGGAGGTGTAATGAAT+TGG + Chr6:110089032-110089051 None:intergenic 45.0%
!! GACGATTCGGTTAAACCTCT+TGG + Chr6:110088822-110088841 None:intergenic 45.0%
!! GGTCTGGGTAATTGGTTTGT+GGG + Chr6:110089251-110089270 None:intergenic 45.0%
!! GTCTGGGTAATTGGTTTGTG+GGG + Chr6:110089250-110089269 None:intergenic 45.0%
!! GTGTGTAGTTTGTTTGGGGA+TGG + Chr6:110089323-110089342 None:intergenic 45.0%
!! TGGTCTGGGTAATTGGTTTG+TGG + Chr6:110089252-110089271 None:intergenic 45.0%
!!! GATGACGTTGGTTCCACTTT+TGG + Chr6:110088771-110088790 None:intergenic 45.0%
AGCTGAAACACAACCTCCGT+TGG - Chr6:110088248-110088267 MsG0680035655.01.T01:CDS 50.0%
ATATCATCTGGTAGGGCAGG+TGG + Chr6:110088673-110088692 None:intergenic 50.0%
GGAGGTTGTGTTTCAGCTTG+TGG + Chr6:110088246-110088265 None:intergenic 50.0%
GGGGTGCACAATACTCTTAC+AGG - Chr6:110088170-110088189 MsG0680035655.01.T01:CDS 50.0%
GGTAGGGCAGGTGGATATTA+TGG + Chr6:110088664-110088683 None:intergenic 50.0%
GGTTGTGTTTCAGCTTGTGG+TGG + Chr6:110088243-110088262 None:intergenic 50.0%
TCATGATGAGGAGGTGGAAG+AGG - Chr6:110089485-110089504 MsG0680035655.01.T01:CDS 50.0%
TGGCGCTAATGAAATGCCTG+GGG - Chr6:110088151-110088170 MsG0680035655.01.T01:CDS 50.0%
! CAATGTTTGGAGGGGTTGGT+AGG + Chr6:110089296-110089315 None:intergenic 50.0%
! GGTGCTGTAGGATAGTCTGA+CGG + Chr6:110088952-110088971 None:intergenic 50.0%
! TCATGGGATGTGGTGGAGAT+TGG + Chr6:110089110-110089129 None:intergenic 50.0%
!! GTAAGAGTATTGTGCACCCC+AGG + Chr6:110088170-110088189 None:intergenic 50.0%
! TCGTCCCGCTTAGCCTTCAA+TGG + Chr6:110087873-110087892 None:intergenic 55.0%
TATGCATAGCTCCCGTGCCC+AGG - Chr6:110088214-110088233 MsG0680035655.01.T01:CDS 60.0%
!! TCAGCTTGTGGTGGGTGCCT+GGG + Chr6:110088234-110088253 None:intergenic 60.0%
!! TTCAGCTTGTGGTGGGTGCC+TGG + Chr6:110088235-110088254 None:intergenic 60.0%
!! TTGTGGTGGGTGCCTGGGCA+CGG + Chr6:110088229-110088248 None:intergenic 65.0%
!! TGTGGTGGGTGCCTGGGCAC+GGG + Chr6:110088228-110088247 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 110087780 110089515 110087780 ID=MsG0680035655.01;Name=MsG0680035655.01
Chr6 mRNA 110087780 110089515 110087780 ID=MsG0680035655.01.T01;Parent=MsG0680035655.01;Name=MsG0680035655.01.T01;_AED=0.31;_eAED=0.31;_QI=0|0|0|1|1|1|2|0|252
Chr6 exon 110089398 110089515 110089398 ID=MsG0680035655.01.T01:exon:8813;Parent=MsG0680035655.01.T01
Chr6 exon 110087780 110088420 110087780 ID=MsG0680035655.01.T01:exon:8812;Parent=MsG0680035655.01.T01
Chr6 CDS 110089398 110089515 110089398 ID=MsG0680035655.01.T01:cds;Parent=MsG0680035655.01.T01
Chr6 CDS 110087780 110088420 110087780 ID=MsG0680035655.01.T01:cds;Parent=MsG0680035655.01.T01
Gene Sequence

>MsG0680035655.01.T01

ATGATCCTTGGTTTAAAGATTAACGGTGTACCAGTTACCGATCTAATAGAAGTATCATGGGAGATTGTTAAACATTCTTTAGGAAGTATGCCATTGAAGGCTAAGCGGGACGAGAAAAATCGTATGTGGATTTCTAAAGAAGCACTATTGGCAAACTCAATGGTAGAGTGTAGAAGAATTTTACGAGAATTGCCGTCAGACTATCCTACAGCACCAGAAACCTATATGATGTCAGATGCAAACATGTGGTCAAATACACCTCCATCCAACAACCAATTCATTACACCTCCACCCACTTACTTTTACCAAAGCTTTAACTCATCCACCAACTACAACTACAACCGAACTTACCAATCTCCACCACATCCCATGAACCAATTCTTACAAAACTCTCCAATTTCATATCGAAGCTACTCTCAACATAGTCATCATGGAGAAAGCTCCCAAACATCAAATTATTCATTTAATTACTTTAATCCAACTCAGAATACCCCACAAACCAATTACCCAGACCAATCACATTACTTCTCGTTCAACCTACCAACCCCTCCAAACATTGTAAACCATCCCCAAACAAACTACACACCTCAATGGTCACATCCACAAACTAATACTATAGAAAGTCTGACTGTAGAGTTTAATGACGATGATTTCGTTAATGAAATTTGGACTAACTTTGTTCCACAAGTACAAAATGAGGTGACTATGGAAACCAATGATGCTGATATTCATGATGAGGAGGTGGAAGAGGAAGAGTAG
Protein sequence

>MsG0680035655.01.T01

MILGLKINGVPVTDLIEVSWEIVKHSLGSMPLKAKRDEKNRMWISKEALLANSMVECRRILRELPSDYPTAPETYMMSDANMWSNTPPSNNQFITPPPTYFYQSFNSSTNYNYNRTYQSPPHPMNQFLQNSPISYRSYSQHSHHGESSQTSNYSFNYFNPTQNTPQTNYPDQSHYFSFNLPTPPNIVNHPQTNYTPQWSHPQTNTIESLTVEFNDDDFVNEIWTNFVPQVQNEVTMETNDADIHDEEVEEEE*