AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036185.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036185.01.T01 MTR_8g017630 86.705 173 23 0 30 202 7 179 5.22e-111 315
MsG0780036185.01.T01 MTR_0350s0010 83.140 172 28 1 32 202 48 219 2.25e-102 295
MsG0780036185.01.T01 MTR_2g028750 72.832 173 47 0 31 203 33 205 2.50e-91 266
MsG0780036185.01.T01 MTR_7g009640 94.074 135 8 0 32 166 1 135 1.28e-87 254
MsG0780036185.01.T01 MTR_8g018030 83.051 59 10 0 30 88 8 66 1.60e-30 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036185.01.T01 AT4G08520 75.862 174 42 0 29 202 7 180 7.25e-97 279
MsG0780036185.01.T01 AT3G09800 73.563 174 46 0 29 202 5 178 6.73e-94 271
MsG0780036185.01.T01 AT3G09800 73.563 174 46 0 29 202 5 178 6.73e-94 271
MsG0780036185.01.T01 AT3G09800 73.563 174 46 0 29 202 5 178 6.73e-94 271
MsG0780036185.01.T01 AT3G09800 73.563 174 46 0 29 202 85 258 1.75e-92 271
MsG0780036185.01.T01 AT1G60970 71.098 173 50 0 31 203 5 177 1.37e-90 263
MsG0780036185.01.T01 AT3G09800 70.492 122 36 0 81 202 18 139 5.85e-57 177
MsG0780036185.01.T01 AT3G09800 70.492 122 36 0 81 202 18 139 5.85e-57 177

Find 27 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTTAAGCTTGTTGCCTTAT+TGG 0.186991 7:+4395567 MsG0780036185.01.T01:CDS
CAAGGCGGAGTCAGCATCTA+TGG 0.348358 7:-4402268 None:intergenic
AGCACAATAACAAGCCAATA+AGG 0.372715 7:-4395581 None:intergenic
TGCCTTGACGAGATAGTTGA+TGG 0.404780 7:+4402109 MsG0780036185.01.T01:CDS
AAGAGAGGCACTTGAGAACT+TGG 0.422153 7:+4402072 MsG0780036185.01.T01:CDS
TGAGTATAGTTTCTGCTTGG+TGG 0.471985 7:+4395624 MsG0780036185.01.T01:CDS
TGCAGACGCTAACGCAAGCA+TGG 0.507776 7:+4403443 MsG0780036185.01.T01:intron
GTTATTGTGCTTCTGTCAAG+TGG 0.510310 7:+4395593 MsG0780036185.01.T01:CDS
GACCTGCATTTCTTTGTCAC+TGG 0.516261 7:+4401863 MsG0780036185.01.T01:CDS
CTCTGAGTATAGTTTCTGCT+TGG 0.517537 7:+4395621 MsG0780036185.01.T01:CDS
ATGCAATCACCCTTCTGTTG+AGG 0.540407 7:+4401939 MsG0780036185.01.T01:CDS
TGCCAGTGACAAAGAAATGC+AGG 0.541473 7:-4401865 None:intergenic
AGCATTTGTCTTGATAGTCT+TGG 0.547180 7:-4400580 None:intergenic
AGCCAAAATACCTCAACAGA+AGG 0.555442 7:-4401949 None:intergenic
TGACTCCGCCTTGTCTGAGC+AGG 0.559584 7:+4402278 MsG0780036185.01.T01:CDS
TTCCCTCTGAGTCTAAAAGA+AGG 0.560577 7:-4400479 None:intergenic
AAGACAAATGCTCGCACAGA+AGG 0.568388 7:+4400591 MsG0780036185.01.T01:CDS
GCAGACGCTAACGCAAGCAT+GGG 0.582122 7:+4403444 MsG0780036185.01.T01:intron
GCCAAAATACCTCAACAGAA+GGG 0.598170 7:-4401948 None:intergenic
CTCCATCAACTATCTCGTCA+AGG 0.603291 7:-4402111 None:intergenic
GTCAGCATCTATGGTGTGAG+AGG 0.619927 7:-4402259 None:intergenic
TAGCACTACCTGCTCAGACA+AGG 0.635959 7:-4402286 None:intergenic
TTGACGAGATAGTTGATGGA+GGG 0.641968 7:+4402113 MsG0780036185.01.T01:CDS
CTTGACGAGATAGTTGATGG+AGG 0.654429 7:+4402112 MsG0780036185.01.T01:CDS
GAATAATGTTGACAAAAGAG+AGG 0.658404 7:+4402057 MsG0780036185.01.T01:CDS
AGGATGATACTTGAAACAAG+TGG 0.684743 7:+4402213 MsG0780036185.01.T01:intron
CACTACCTGCTCAGACAAGG+CGG 0.687504 7:-4402283 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAACTTGATAAATATAA+TGG + Chr7:4401118-4401137 MsG0780036185.01.T01:intron 10.0%
!! ACTAAGATAATAAATATTTA+TGG - Chr7:4403339-4403358 None:intergenic 10.0%
!! TTTGAAAGAATTAAATAAAT+TGG + Chr7:4399176-4399195 MsG0780036185.01.T01:intron 10.0%
!!! AATATTTTTTAAAAAACGAA+TGG - Chr7:4402182-4402201 None:intergenic 10.0%
!!! ATTTTGATTTTTAATACTTA+TGG - Chr7:4399577-4399596 None:intergenic 10.0%
!!! TGTTTTAATTATCATTATTT+TGG - Chr7:4401173-4401192 None:intergenic 10.0%
!!! TTAAGTTTTAAGAATAAATA+GGG + Chr7:4402719-4402738 MsG0780036185.01.T01:intron 10.0%
!!! TTTTGATTTTTAATACTTAT+GGG - Chr7:4399576-4399595 None:intergenic 10.0%
!! AATAGAATGATGAATAAAAT+AGG - Chr7:4402009-4402028 None:intergenic 15.0%
!! AATATTATTCTGTAATCAAA+AGG + Chr7:4402831-4402850 MsG0780036185.01.T01:intron 15.0%
!! ATATTATTCTGTAATCAAAA+GGG + Chr7:4402832-4402851 MsG0780036185.01.T01:intron 15.0%
!! ATATTCCAAACTAAAAAATT+TGG - Chr7:4401677-4401696 None:intergenic 15.0%
!! CATACTTCAAAAAAAAAAAA+TGG + Chr7:4399487-4399506 MsG0780036185.01.T01:intron 15.0%
!! GTTTAAGTAAAGATTATATT+TGG + Chr7:4398201-4398220 MsG0780036185.01.T01:intron 15.0%
!! GTTTATTAATTAATCATTTG+AGG + Chr7:4396382-4396401 MsG0780036185.01.T01:intron 15.0%
!! TAACAATAAACATTGTATAA+TGG - Chr7:4398491-4398510 None:intergenic 15.0%
!! TGATATAGAAGAATAAAATA+GGG - Chr7:4402863-4402882 None:intergenic 15.0%
!!! AACTAGCTTTTTTTTTTTAA+AGG - Chr7:4398737-4398756 None:intergenic 15.0%
!!! ATTTCTAGAAAATTGTTATT+TGG - Chr7:4397277-4397296 None:intergenic 15.0%
!!! CTTTTTTTTTTTAAAGGAAA+GGG - Chr7:4398731-4398750 None:intergenic 15.0%
!!! GTAATTTTTGTATCATTTAT+AGG + Chr7:4402035-4402054 MsG0780036185.01.T01:intron 15.0%
!!! GTTAAGTTTTAAGAATAAAT+AGG + Chr7:4402718-4402737 MsG0780036185.01.T01:intron 15.0%
!!! GTTGTATTTTTTTTTTTTTG+TGG - Chr7:4396462-4396481 None:intergenic 15.0%
!!! TAAGTTTTAAGAATAAATAG+GGG + Chr7:4402720-4402739 MsG0780036185.01.T01:intron 15.0%
!!! TATTTTTTTTTTTTTGTGGT+GGG - Chr7:4396458-4396477 None:intergenic 15.0%
!!! TTATTACCTTTTCATTTTTT+TGG - Chr7:4398966-4398985 None:intergenic 15.0%
!!! TTTCTAGAAAATTGTTATTT+GGG - Chr7:4397276-4397295 None:intergenic 15.0%
!! AAAACAAGTGTTAAAAATCA+TGG - Chr7:4396321-4396340 None:intergenic 20.0%
!! AAGTAAAGATTATATTTGGA+AGG + Chr7:4398205-4398224 MsG0780036185.01.T01:intron 20.0%
!! AATATGATATCAAAGTCTAT+AGG + Chr7:4400914-4400933 MsG0780036185.01.T01:intron 20.0%
!! AGATCAAAAAAATAAAACCT+TGG + Chr7:4401239-4401258 MsG0780036185.01.T01:intron 20.0%
!! AGCTATTAATATTTGTGTTA+AGG + Chr7:4400388-4400407 MsG0780036185.01.T01:intron 20.0%
!! AGTATGTCATAAAACTTTAT+TGG + Chr7:4399815-4399834 MsG0780036185.01.T01:intron 20.0%
!! ATAGACTTTGATATCATATT+AGG - Chr7:4400914-4400933 None:intergenic 20.0%
!! ATATGTGTTAAAATCTGTAA+TGG - Chr7:4400620-4400639 None:intergenic 20.0%
!! ATCAACCAAAATATACATAT+TGG - Chr7:4401310-4401329 None:intergenic 20.0%
!! ATTCTAATAAGATATCTAAC+AGG - Chr7:4402605-4402624 None:intergenic 20.0%
!! CTGATATAGAAGAATAAAAT+AGG - Chr7:4402864-4402883 None:intergenic 20.0%
!! TAAAATAGTTGGAAGTTATA+TGG + Chr7:4396049-4396068 MsG0780036185.01.T01:intron 20.0%
!! TAACAATTCTTAACAGATTT+AGG - Chr7:4398367-4398386 None:intergenic 20.0%
!! TAATTTCATAAACTCGTATT+GGG - Chr7:4401650-4401669 None:intergenic 20.0%
!! TAGAAATAGTAATATCAAGT+GGG + Chr7:4397977-4397996 MsG0780036185.01.T01:intron 20.0%
!! TCAAACTAATCTCTATATAT+AGG + Chr7:4396174-4396193 MsG0780036185.01.T01:intron 20.0%
!! TTAAAGTATATATACCCTTT+CGG - Chr7:4398515-4398534 None:intergenic 20.0%
!! TTAATGTCTATATGATACAA+TGG - Chr7:4401747-4401766 None:intergenic 20.0%
!! TTAATTTCATAAACTCGTAT+TGG - Chr7:4401651-4401670 None:intergenic 20.0%
!! TTTGTATACTATAAAGACTA+AGG - Chr7:4395956-4395975 None:intergenic 20.0%
!!! AACATTTTTTAGTTCGATAA+TGG - Chr7:4400285-4400304 None:intergenic 20.0%
!!! AATCTTGGTTAGTTTTTATT+CGG - Chr7:4397017-4397036 None:intergenic 20.0%
!!! ACATAGAATTTTTAGTTACT+AGG + Chr7:4396768-4396787 MsG0780036185.01.T01:intron 20.0%
!!! AGAAGGATATTTTTTATCAT+AGG - Chr7:4400465-4400484 None:intergenic 20.0%
!!! AGTTATTTATAACTTTTTGG+TGG + Chr7:4398858-4398877 MsG0780036185.01.T01:intron 20.0%
!!! ATGTACATTTTATTTTTGAC+AGG - Chr7:4396752-4396771 None:intergenic 20.0%
!!! CATAGAATTTTTAGTTACTA+GGG + Chr7:4396769-4396788 MsG0780036185.01.T01:intron 20.0%
!!! GACATGATTTGATTTAAAAA+TGG + Chr7:4399203-4399222 MsG0780036185.01.T01:intron 20.0%
!!! GCTTTTTTTTTTTAAAGGAA+AGG - Chr7:4398732-4398751 None:intergenic 20.0%
!!! GTATTTTTTTTTTTTTGTGG+TGG - Chr7:4396459-4396478 None:intergenic 20.0%
!!! GTGAGTTATTTATAACTTTT+TGG + Chr7:4398855-4398874 MsG0780036185.01.T01:intron 20.0%
!!! TATTTTTTTGTTCATGAGAT+TGG + Chr7:4400336-4400355 MsG0780036185.01.T01:intron 20.0%
!!! TCAATTTATGAGCATTTTAA+TGG + Chr7:4399457-4399476 MsG0780036185.01.T01:intron 20.0%
!!! TGATTTGATTTAAAAATGGA+TGG + Chr7:4399207-4399226 MsG0780036185.01.T01:intron 20.0%
!!! TTTCACTCGTATTTTTATAA+GGG - Chr7:4397832-4397851 None:intergenic 20.0%
!!! TTTTATTCTTCTATATCAGT+TGG + Chr7:4402865-4402884 MsG0780036185.01.T01:intron 20.0%
! AAAAAAAACATGTCAGTGTT+GGG - Chr7:4402472-4402491 None:intergenic 25.0%
! AAAACAAATCTATCAACCTT+AGG + Chr7:4401430-4401449 MsG0780036185.01.T01:intron 25.0%
! AAAATCATGAAATCCATGTA+AGG - Chr7:4399082-4399101 None:intergenic 25.0%
! AAAGATATGAATGTGTACTA+TGG - Chr7:4396204-4396223 None:intergenic 25.0%
! AAATTAGAAGTAGATACTTG+AGG + Chr7:4398400-4398419 MsG0780036185.01.T01:intron 25.0%
! AACTGTCAGATTATAATTTG+AGG + Chr7:4401600-4401619 MsG0780036185.01.T01:intron 25.0%
! AAGTCAAGTAGAATTGTAAT+GGG - Chr7:4398116-4398135 None:intergenic 25.0%
! AAGTTATATGGAGTTAGTTA+AGG + Chr7:4396061-4396080 MsG0780036185.01.T01:intron 25.0%
! AAGTTTATAGGCTTCAATAT+GGG + Chr7:4395878-4395897 MsG0780036185.01.T01:intron 25.0%
! AATAACATCAGGTTTAATGA+TGG - Chr7:4397919-4397938 None:intergenic 25.0%
! AATATCAAAATTTCACTGTC+AGG - Chr7:4403424-4403443 None:intergenic 25.0%
! AATCCATGTAAGGATATAAT+CGG - Chr7:4399072-4399091 None:intergenic 25.0%
! AATGTTTATTGTTAACCGAA+AGG + Chr7:4398497-4398516 MsG0780036185.01.T01:intron 25.0%
! AATTAGAAGTAGATACTTGA+GGG + Chr7:4398401-4398420 MsG0780036185.01.T01:intron 25.0%
! ACATGATTATTGATGTTTAC+TGG + Chr7:4400681-4400700 MsG0780036185.01.T01:intron 25.0%
! ACCAAAATATACATATTGGT+AGG - Chr7:4401306-4401325 None:intergenic 25.0%
! AGTAGTTAAGCATTAAAAGA+AGG + Chr7:4395741-4395760 MsG0780036185.01.T01:intron 25.0%
! AGTAGTTAATTATGCAGTTA+TGG + Chr7:4402648-4402667 MsG0780036185.01.T01:intron 25.0%
! ATAAAAAATGCAAGCGTAAA+AGG - Chr7:4400319-4400338 None:intergenic 25.0%
! ATAATTAATCAAGTCAGTAG+TGG + Chr7:4402692-4402711 MsG0780036185.01.T01:intron 25.0%
! ATGTATACCTATATATAAGG+AGG - Chr7:4398258-4398277 None:intergenic 25.0%
! ATGTTTATTGTTAACCGAAA+GGG + Chr7:4398498-4398517 MsG0780036185.01.T01:intron 25.0%
! ATTAGTTAATGTGTACCAAT+GGG - Chr7:4401333-4401352 None:intergenic 25.0%
! ATTGTATTCCAAACTCAAAT+TGG + Chr7:4395992-4396011 MsG0780036185.01.T01:intron 25.0%
! ATTTAACATGTTGCATTCTT+AGG - Chr7:4398074-4398093 None:intergenic 25.0%
! CAACAATGTGATATATATCT+TGG + Chr7:4396478-4396497 MsG0780036185.01.T01:intron 25.0%
! CTAGAAATAGTAATATCAAG+TGG + Chr7:4397976-4397995 MsG0780036185.01.T01:intron 25.0%
! GTATTATAAATAAGATGCAG+AGG + Chr7:4402992-4403011 MsG0780036185.01.T01:intron 25.0%
! GTCATGTATACCTATATATA+AGG - Chr7:4398261-4398280 None:intergenic 25.0%
! TAAAAAAAACATGTCAGTGT+TGG - Chr7:4402473-4402492 None:intergenic 25.0%
! TAATCATGTAAACTAGCATA+TGG - Chr7:4400670-4400689 None:intergenic 25.0%
! TAATTAATCAAGTCAGTAGT+GGG + Chr7:4402693-4402712 MsG0780036185.01.T01:intron 25.0%
! TATAAGGAAAGTTATGAACT+TGG - Chr7:4403267-4403286 None:intergenic 25.0%
! TATCTTGAATCAATATGTCA+TGG + Chr7:4401981-4402000 MsG0780036185.01.T01:intron 25.0%
! TATGTATCCTCCTTATATAT+AGG + Chr7:4398248-4398267 MsG0780036185.01.T01:intron 25.0%
! TATTAGTTAATGTGTACCAA+TGG - Chr7:4401334-4401353 None:intergenic 25.0%
! TATTCTCTCTCAAAATCTAA+TGG + Chr7:4403199-4403218 MsG0780036185.01.T01:intron 25.0%
! TCACAATTTATATTTCTCGA+AGG + Chr7:4399845-4399864 MsG0780036185.01.T01:intron 25.0%
! TCCTAACCAAAAAAATGAAA+AGG + Chr7:4398957-4398976 MsG0780036185.01.T01:intron 25.0%
! TGTACTAGTAGTTATTACAT+AGG + Chr7:4401538-4401557 MsG0780036185.01.T01:intron 25.0%
! TGTTAAAAATCATGGAATCA+GGG - Chr7:4396313-4396332 None:intergenic 25.0%
! TTATTATGACATTCACTATG+TGG + Chr7:4401705-4401724 MsG0780036185.01.T01:intron 25.0%
! TTATTCTCTCTTAGATTAGT+TGG + Chr7:4399640-4399659 MsG0780036185.01.T01:intron 25.0%
! TTTGAATCCATGATTTAACA+TGG + Chr7:4398000-4398019 MsG0780036185.01.T01:intron 25.0%
!! ATTTTTATAAGGGATTCTTG+TGG - Chr7:4397822-4397841 None:intergenic 25.0%
!! CTAAATAGCATTCTATGTTT+TGG - Chr7:4398327-4398346 None:intergenic 25.0%
!! GAATACAATGAAAGTACAAT+TGG - Chr7:4395981-4396000 None:intergenic 25.0%
!! TAACGTTGAGTTTATTGTTT+TGG - Chr7:4397044-4397063 None:intergenic 25.0%
!! TGTCACTGTAATATATTTTC+AGG - Chr7:4401042-4401061 None:intergenic 25.0%
!! TTTTAATACTTATGGGAACA+AGG - Chr7:4399569-4399588 None:intergenic 25.0%
!! TTTTTCACTTGTTCTCAATT+GGG + Chr7:4395811-4395830 MsG0780036185.01.T01:intron 25.0%
!!! AACACTGACATGTTTTTTTT+AGG + Chr7:4402472-4402491 MsG0780036185.01.T01:intron 25.0%
!!! AACTGCCAAATTTTTTAGTT+TGG + Chr7:4401669-4401688 MsG0780036185.01.T01:intron 25.0%
!!! ACCTTTTCATTTTTTTGGTT+AGG - Chr7:4398961-4398980 None:intergenic 25.0%
!!! ATGAGATATGATTTTAACGT+TGG + Chr7:4399146-4399165 MsG0780036185.01.T01:intron 25.0%
!!! GATTTGTTTCTATGATATGT+GGG - Chr7:4397331-4397350 None:intergenic 25.0%
!!! GTTTCACTCGTATTTTTATA+AGG - Chr7:4397833-4397852 None:intergenic 25.0%
!!! TATTGTTTTGGTTGTAATCT+TGG - Chr7:4397032-4397051 None:intergenic 25.0%
!!! TCATTATTACAGAGTTTTGA+CGG + Chr7:4403358-4403377 MsG0780036185.01.T01:intron 25.0%
!!! TGATTTGTTTCTATGATATG+TGG - Chr7:4397332-4397351 None:intergenic 25.0%
!!! TTGAATGTGTTCATTTTTCA+TGG + Chr7:4401265-4401284 MsG0780036185.01.T01:intron 25.0%
!!! TTTGGTATTTTTGAAACACT+TGG - Chr7:4400076-4400095 None:intergenic 25.0%
!!! TTTTTTCACTTGTTCTCAAT+TGG + Chr7:4395810-4395829 MsG0780036185.01.T01:intron 25.0%
AAAAATATTCCCTCACTTGA+AGG + Chr7:4402193-4402212 MsG0780036185.01.T01:intron 30.0%
AAACCGATTATATCCTTACA+TGG + Chr7:4399066-4399085 MsG0780036185.01.T01:intron 30.0%
AAATCAACAACACCCAAAAT+TGG + Chr7:4397556-4397575 MsG0780036185.01.T01:intron 30.0%
AACACTAATGACTTTCTTGA+AGG + Chr7:4399937-4399956 MsG0780036185.01.T01:intron 30.0%
AAGAATGAATTAGGCTCAAT+AGG + Chr7:4400884-4400903 MsG0780036185.01.T01:intron 30.0%
AATAATATTGCAGAACTTCG+AGG - Chr7:4402820-4402839 None:intergenic 30.0%
AGCACCAAAACTTATATTGA+AGG + Chr7:4402423-4402442 MsG0780036185.01.T01:intron 30.0%
AGTTAAGCATTAAAAGAAGG+AGG + Chr7:4395744-4395763 MsG0780036185.01.T01:intron 30.0%
ATAATATTGCAGAACTTCGA+GGG - Chr7:4402819-4402838 None:intergenic 30.0%
ATATGTGGTTACATACATGT+CGG + Chr7:4402507-4402526 MsG0780036185.01.T01:intron 30.0%
ATGAAAGGATCAATACATGT+AGG - Chr7:4398689-4398708 None:intergenic 30.0%
CAACATGTTAAATCTTTGAG+AGG + Chr7:4398081-4398100 MsG0780036185.01.T01:intron 30.0%
CAAGTCAAGTAGAATTGTAA+TGG - Chr7:4398117-4398136 None:intergenic 30.0%
CACCAAAACTTATATTGAAG+GGG + Chr7:4402425-4402444 MsG0780036185.01.T01:intron 30.0%
CATGATTTAACATGGTTCAT+GGG + Chr7:4398008-4398027 MsG0780036185.01.T01:intron 30.0%
CATTGAAAATAGACAAGGTA+TGG + Chr7:4400815-4400834 MsG0780036185.01.T01:intron 30.0%
CTAACATCAAAAACCATCAA+GGG - Chr7:4395712-4395731 None:intergenic 30.0%
CTAGCAACTTCATGTATATA+AGG - Chr7:4403283-4403302 None:intergenic 30.0%
CTATAAAGACTAAGGAAACA+TGG - Chr7:4395948-4395967 None:intergenic 30.0%
GAAGTTTATAGGCTTCAATA+TGG + Chr7:4395877-4395896 MsG0780036185.01.T01:intron 30.0%
GAATAATGTTGACAAAAGAG+AGG + Chr7:4402057-4402076 MsG0780036185.01.T01:CDS 30.0%
GAGTCTGATTAAGTACATTT+AGG - Chr7:4401385-4401404 None:intergenic 30.0%
GATGACATTATTGAATTCAG+TGG + Chr7:4399902-4399921 MsG0780036185.01.T01:intron 30.0%
GCACCAAAACTTATATTGAA+GGG + Chr7:4402424-4402443 MsG0780036185.01.T01:intron 30.0%
GTGTTAAAAATCATGGAATC+AGG - Chr7:4396314-4396333 None:intergenic 30.0%
TAATGCCATACATGATTTCA+TGG + Chr7:4399995-4400014 MsG0780036185.01.T01:intron 30.0%
TCATCAAATCAGAGGATAAA+AGG - Chr7:4399008-4399027 None:intergenic 30.0%
TCCTACATTGAAAATAGACA+AGG + Chr7:4400810-4400829 MsG0780036185.01.T01:intron 30.0%
TCTTTCAAAACCGATTGATA+AGG - Chr7:4400868-4400887 None:intergenic 30.0%
TGATGAAATCATCAAATCAG+AGG - Chr7:4399016-4399035 None:intergenic 30.0%
TTCACACTTTACATGCAATT+TGG - Chr7:4397951-4397970 None:intergenic 30.0%
TTCACTGACCAAAAAAGAAA+AGG - Chr7:4401481-4401500 None:intergenic 30.0%
TTGAAATAGCTGATTGAAGA+GGG + Chr7:4400365-4400384 MsG0780036185.01.T01:intron 30.0%
TTGTAAAGAAGAACAAAGAC+CGG + Chr7:4396874-4396893 MsG0780036185.01.T01:intron 30.0%
! AAGTTACTTTCTTGCATAGA+TGG + Chr7:4401210-4401229 MsG0780036185.01.T01:intron 30.0%
! ACCTTGTCTATTTTCAATGT+AGG - Chr7:4400814-4400833 None:intergenic 30.0%
! ATTTTGAACAACACAGATTC+TGG + Chr7:4399279-4399298 MsG0780036185.01.T01:intron 30.0%
! GAAATTCACCAATTTGAGTT+TGG - Chr7:4396003-4396022 None:intergenic 30.0%
! GCATATTAAGTATACTGACT+AGG + Chr7:4398455-4398474 MsG0780036185.01.T01:intron 30.0%
! GCCTACCAATATGTATATTT+TGG + Chr7:4401302-4401321 MsG0780036185.01.T01:intron 30.0%
! TAAGGAGGATACATAGTTTT+CGG - Chr7:4398243-4398262 None:intergenic 30.0%
! TACAATTCTACTTGACTTGA+GGG + Chr7:4398118-4398137 MsG0780036185.01.T01:intron 30.0%
! TAGATGTTTGGAACGAATTT+CGG - Chr7:4397129-4397148 None:intergenic 30.0%
! TTACAATTCTACTTGACTTG+AGG + Chr7:4398117-4398136 MsG0780036185.01.T01:intron 30.0%
! TTACTCCTCCTTTTCTTTTT+TGG + Chr7:4401470-4401489 MsG0780036185.01.T01:intron 30.0%
! TTTGAAATAGCTGATTGAAG+AGG + Chr7:4400364-4400383 MsG0780036185.01.T01:intron 30.0%
!! AAGCAAAAGAGTATTCATGA+GGG - Chr7:4396261-4396280 None:intergenic 30.0%
!! AATGTGTTTTGTTGGGTTTT+TGG - Chr7:4397177-4397196 None:intergenic 30.0%
!! AGGATATAATCGGTTTGATT+TGG - Chr7:4399062-4399081 None:intergenic 30.0%
!! ATTGTTATTTGGGCTTGTTA+TGG - Chr7:4397266-4397285 None:intergenic 30.0%
!! GATGTTTGTACGTTATTTTG+TGG - Chr7:4398939-4398958 None:intergenic 30.0%
!! GATTTGTTTTCATCACATGT+TGG - Chr7:4401420-4401439 None:intergenic 30.0%
!! TCAAGTATTTTTCAGATGAC+TGG + Chr7:4400514-4400533 MsG0780036185.01.T01:CDS 30.0%
!! TTGTACGTTATTTTGTGGTT+TGG - Chr7:4398934-4398953 None:intergenic 30.0%
!!! ATTTTGGGTGTTGTTGATTT+TGG - Chr7:4397556-4397575 None:intergenic 30.0%
!!! CGGTTTTGAAAGAATGAATT+AGG + Chr7:4400875-4400894 MsG0780036185.01.T01:intron 30.0%
!!! GCTAGTTTTGAACTATTTGT+TGG - Chr7:4400540-4400559 None:intergenic 30.0%
!!! GCTCATTTTTTGAACATGAA+AGG - Chr7:4398704-4398723 None:intergenic 30.0%
!!! TATATTTTGGTTGATCCCAT+TGG + Chr7:4401315-4401334 MsG0780036185.01.T01:intron 30.0%
!!! TGGTTAGTTTTTATTCGGTT+TGG - Chr7:4397012-4397031 None:intergenic 30.0%
!!! TTTTGGGTGTTGTTGATTTT+GGG - Chr7:4397555-4397574 None:intergenic 30.0%
AAACTCGTATTGGGATAGAA+TGG - Chr7:4401641-4401660 None:intergenic 35.0%
AAAGCTCTCCAATTACTCAT+TGG - Chr7:4400754-4400773 None:intergenic 35.0%
AAATCCCTAAGACAGTAAAC+GGG + Chr7:4397475-4397494 MsG0780036185.01.T01:intron 35.0%
AAGAATAAATAGGGGAGAGA+AGG + Chr7:4402728-4402747 MsG0780036185.01.T01:intron 35.0%
AAGCTCTCCAATTACTCATT+GGG - Chr7:4400753-4400772 None:intergenic 35.0%
AAGTATCATCCTTCAAGTGA+GGG - Chr7:4402205-4402224 None:intergenic 35.0%
AATCGATCGAATACTAGAGA+AGG - Chr7:4400128-4400147 None:intergenic 35.0%
ACTGACCAAAAAAGAAAAGG+AGG - Chr7:4401478-4401497 None:intergenic 35.0%
AGAATAAATAGGGGAGAGAA+GGG + Chr7:4402729-4402748 MsG0780036185.01.T01:intron 35.0%
AGCACAATAACAAGCCAATA+AGG - Chr7:4395584-4395603 None:intergenic 35.0%
AGGATGATACTTGAAACAAG+TGG + Chr7:4402213-4402232 MsG0780036185.01.T01:intron 35.0%
AGTGGAATGGTGAAGTTTAT+AGG + Chr7:4395866-4395885 MsG0780036185.01.T01:intron 35.0%
AGTTTCCTGCATGGATAATA+TGG - Chr7:4400953-4400972 None:intergenic 35.0%
ATGGCATTCATGATAGAGTT+TGG - Chr7:4397106-4397125 None:intergenic 35.0%
ATTTGTAGTTTGGATTCTGG+TGG - Chr7:4397459-4397478 None:intergenic 35.0%
CAAATCCCTAAGACAGTAAA+CGG + Chr7:4397474-4397493 MsG0780036185.01.T01:intron 35.0%
CAGATACAACTTTCCGAAAT+TGG + Chr7:4402357-4402376 MsG0780036185.01.T01:intron 35.0%
CAGTTGTCACAAATGATACT+CGG + Chr7:4398152-4398171 MsG0780036185.01.T01:intron 35.0%
CATAATGCTTAACCACCATA+AGG - Chr7:4395688-4395707 None:intergenic 35.0%
CATGAGGGAAAAAAACTCAT+AGG - Chr7:4396246-4396265 None:intergenic 35.0%
CCATGAACCATGTTAAATCA+TGG - Chr7:4398010-4398029 None:intergenic 35.0%
CCATGATTTAACATGGTTCA+TGG + Chr7:4398007-4398026 MsG0780036185.01.T01:intron 35.0%
CTAAACTAGAGTTAGTAGCT+TGG + Chr7:4396126-4396145 MsG0780036185.01.T01:intron 35.0%
CTAAAGTATGGTGCTTCATA+GGG - Chr7:4403172-4403191 None:intergenic 35.0%
CTTACAAAATCGACCTGTTA+AGG - Chr7:4401072-4401091 None:intergenic 35.0%
GAATACCTACAGCTAAAGTA+TGG - Chr7:4403184-4403203 None:intergenic 35.0%
GACAAGTGAGATGTTCAATT+TGG - Chr7:4399352-4399371 None:intergenic 35.0%
GACATGTATGTAACCACATA+TGG - Chr7:4402508-4402527 None:intergenic 35.0%
GACTTCTATGTAACAGCTAT+AGG + Chr7:4402964-4402983 MsG0780036185.01.T01:intron 35.0%
GATTGTTACAATGTTCTCTC+CGG - Chr7:4397382-4397401 None:intergenic 35.0%
GCTAACATCAAAAACCATCA+AGG - Chr7:4395713-4395732 None:intergenic 35.0%
TAAGATGCAGAGGAAAAGAA+AGG + Chr7:4403002-4403021 MsG0780036185.01.T01:intron 35.0%
TAATGGAAACATAACCAGGT+CGG + Chr7:4397506-4397525 MsG0780036185.01.T01:intron 35.0%
TACTTTCTTGCATAGATGGA+AGG + Chr7:4401214-4401233 MsG0780036185.01.T01:intron 35.0%
TATAAACTTCACCATTCCAC+TGG - Chr7:4395867-4395886 None:intergenic 35.0%
TATACCCGTTTACTGTCTTA+GGG - Chr7:4397482-4397501 None:intergenic 35.0%
TCAAATCAGAGGATAAAAGG+TGG - Chr7:4399005-4399024 None:intergenic 35.0%
TCACTGTGAGAAGAAACTAA+AGG + Chr7:4398757-4398776 MsG0780036185.01.T01:intron 35.0%
TCATCTACATTGATCCATCA+AGG + Chr7:4399538-4399557 MsG0780036185.01.T01:intron 35.0%
TCCAAAGTAAAACGAGTATG+AGG - Chr7:4403313-4403332 None:intergenic 35.0%
TGGCATTCATGATAGAGTTT+GGG - Chr7:4397105-4397124 None:intergenic 35.0%
TGGTAAAGTAGCATTGTTGT+TGG - Chr7:4400207-4400226 None:intergenic 35.0%
TGTAATACTGATCAAGCCTA+AGG - Chr7:4401449-4401468 None:intergenic 35.0%
TGTCTTAGGGATTTGTAGTT+TGG - Chr7:4397469-4397488 None:intergenic 35.0%
TGTTCAATTTGGTTGAGACA+AGG - Chr7:4399341-4399360 None:intergenic 35.0%
TTAAGCATTATGTCCCTTGA+TGG + Chr7:4395696-4395715 MsG0780036185.01.T01:intron 35.0%
TTTCCTCTACTATATGCTTG+TGG - Chr7:4397622-4397641 None:intergenic 35.0%
TTTGTAGTTTGGATTCTGGT+GGG - Chr7:4397458-4397477 None:intergenic 35.0%
! AAGTCACTGTTTCTCCAAAA+TGG + Chr7:4399398-4399417 MsG0780036185.01.T01:intron 35.0%
! AGCATTTGTCTTGATAGTCT+TGG - Chr7:4400583-4400602 None:intergenic 35.0%
! ATCCTTCTTTTAGACTCAGA+GGG + Chr7:4400477-4400496 MsG0780036185.01.T01:CDS 35.0%
! ATGAGTAATTGGAGAGCTTT+TGG + Chr7:4400754-4400773 MsG0780036185.01.T01:intron 35.0%
! ATTAGTGGTGGTGTTAATGT+TGG - Chr7:4397797-4397816 None:intergenic 35.0%
! ATTGGGATAAAGGATTGGTA+GGG + Chr7:4403034-4403053 MsG0780036185.01.T01:intron 35.0%
! CACCCCTTCAATATAAGTTT+TGG - Chr7:4402430-4402449 None:intergenic 35.0%
! GTAGATACTTGAGGGTATAT+TGG + Chr7:4398409-4398428 MsG0780036185.01.T01:intron 35.0%
! GTTTGCTAAAAGAGAAGCTA+TGG + Chr7:4398601-4398620 MsG0780036185.01.T01:intron 35.0%
! TATCCTTCTTTTAGACTCAG+AGG + Chr7:4400476-4400495 MsG0780036185.01.T01:CDS 35.0%
! TCAGTTGGTTTCTATACTAG+TGG + Chr7:4402880-4402899 MsG0780036185.01.T01:intron 35.0%
! TCATACTCGTTTTACTTTGG+AGG + Chr7:4403312-4403331 MsG0780036185.01.T01:intron 35.0%
! TCCTCATACTCGTTTTACTT+TGG + Chr7:4403309-4403328 MsG0780036185.01.T01:intron 35.0%
! TCTCTCTTAGATTAGTTGGA+TGG + Chr7:4399644-4399663 MsG0780036185.01.T01:intron 35.0%
!! ACATACATGAGATGCCATTT+TGG - Chr7:4399415-4399434 None:intergenic 35.0%
!! AGCATCTAGTTTCAAGTTCT+TGG - Chr7:4397405-4397424 None:intergenic 35.0%
!! AGGTGTAGGAACTTACTTTT+GGG - Chr7:4396942-4396961 None:intergenic 35.0%
!! CAAGCAAAAGAGTATTCATG+AGG - Chr7:4396262-4396281 None:intergenic 35.0%
!! CTGATATTTTTGTTACCACC+AGG - Chr7:4399781-4399800 None:intergenic 35.0%
!! CTTAACAGGTCGATTTTGTA+AGG + Chr7:4401070-4401089 MsG0780036185.01.T01:intron 35.0%
!! CTTAGATTTGCTGGATTTCT+TGG + Chr7:4395905-4395924 MsG0780036185.01.T01:intron 35.0%
!! GCATCTAGTTTCAAGTTCTT+GGG - Chr7:4397404-4397423 None:intergenic 35.0%
!! TTTTGGAGAAACAGTGACTT+TGG - Chr7:4399398-4399417 None:intergenic 35.0%
!!! ACTTTTTTGCTGTTCACTGA+TGG + Chr7:4401570-4401589 MsG0780036185.01.T01:intron 35.0%
!!! GTTTTAGCTTCAGTTCTTCA+GGG + Chr7:4401908-4401927 MsG0780036185.01.T01:CDS 35.0%
!!! TATGGGTGTTTTGATGTATG+AGG - Chr7:4396962-4396981 None:intergenic 35.0%
!!! TGTTTTAGCTTCAGTTCTTC+AGG + Chr7:4401907-4401926 MsG0780036185.01.T01:CDS 35.0%
!!! TGTTTTGATGTATGAGGTGT+AGG - Chr7:4396956-4396975 None:intergenic 35.0%
AAGACAGTAAACGGGTATAG+TGG + Chr7:4397483-4397502 MsG0780036185.01.T01:intron 40.0%
AAGCACCATACTTTAGCTGT+AGG + Chr7:4403176-4403195 MsG0780036185.01.T01:intron 40.0%
ACACGCCATGAAATCATGTA+TGG - Chr7:4400003-4400022 None:intergenic 40.0%
ACATTCACTATGTGGAACTG+TGG + Chr7:4401713-4401732 MsG0780036185.01.T01:intron 40.0%
ACCAAGACTCTCGAATTTCT+TGG + Chr7:4403092-4403111 MsG0780036185.01.T01:intron 40.0%
AGCATTATATACGACCGTCT+AGG - Chr7:4398642-4398661 None:intergenic 40.0%
AGCCAAAATACCTCAACAGA+AGG - Chr7:4401952-4401971 None:intergenic 40.0%
AGGGAGGCTGTTAAAATAGT+TGG + Chr7:4396038-4396057 MsG0780036185.01.T01:intron 40.0%
ATCCACCATATTATCCATGC+AGG + Chr7:4400945-4400964 MsG0780036185.01.T01:intron 40.0%
ATGGGCTTTCTTAGATTTGC+TGG + Chr7:4395896-4395915 MsG0780036185.01.T01:intron 40.0%
ATTCTTGTGGTGATTAGTGG+TGG - Chr7:4397809-4397828 None:intergenic 40.0%
ATTTCCCCATTCTGAGTTTG+AGG + Chr7:4396018-4396037 MsG0780036185.01.T01:intron 40.0%
CAAAACCGATTGATAAGGTG+AGG - Chr7:4400863-4400882 None:intergenic 40.0%
CAACTAGTGCTTCTCAAACA+AGG + Chr7:4400243-4400262 MsG0780036185.01.T01:intron 40.0%
CAAGTATCATCCTTCAAGTG+AGG - Chr7:4402206-4402225 None:intergenic 40.0%
CAGTGAACACACATCAGTAT+TGG + Chr7:4401494-4401513 MsG0780036185.01.T01:intron 40.0%
CCAAGACTCTCGAATTTCTT+GGG + Chr7:4403093-4403112 MsG0780036185.01.T01:intron 40.0%
CCTAAAGTATGGTGCTTCAT+AGG - Chr7:4403234-4403253 None:intergenic 40.0%
CTATACCCGTTTACTGTCTT+AGG - Chr7:4397483-4397502 None:intergenic 40.0%
CTCGAAGGTTTGCGATAAAA+TGG + Chr7:4399860-4399879 MsG0780036185.01.T01:intron 40.0%
CTCTGAGTATAGTTTCTGCT+TGG + Chr7:4395621-4395640 MsG0780036185.01.T01:CDS 40.0%
GAACTCGAAGCAAAAGTGAT+CGG + Chr7:4397432-4397451 MsG0780036185.01.T01:intron 40.0%
GAGAAGCTATGGTTGCTAAT+CGG + Chr7:4398612-4398631 MsG0780036185.01.T01:intron 40.0%
GATCCTCTACACCTAAAGTA+TGG - Chr7:4403245-4403264 None:intergenic 40.0%
GATCTCGAAGCAAAAACGAT+CGG + Chr7:4397305-4397324 MsG0780036185.01.T01:intron 40.0%
GCCAAAATACCTCAACAGAA+GGG - Chr7:4401951-4401970 None:intergenic 40.0%
GCTAAAGTATGGTGCTTCAT+AGG - Chr7:4403173-4403192 None:intergenic 40.0%
GCTAGAATCAACAAGCCATA+AGG - Chr7:4395660-4395679 None:intergenic 40.0%
GGACATGAAACCTACAACAA+AGG - Chr7:4400444-4400463 None:intergenic 40.0%
GGCATTCATGATAGAGTTTG+GGG - Chr7:4397104-4397123 None:intergenic 40.0%
GGCTTGCAAGAAATAACATC+AGG - Chr7:4397930-4397949 None:intergenic 40.0%
GGGATTTGTAGTTTGGATTC+TGG - Chr7:4397462-4397481 None:intergenic 40.0%
GGTTAACTGTGTATTTCGTG+TGG - Chr7:4397716-4397735 None:intergenic 40.0%
GTAAACGGGTATAGTGGTAA+TGG + Chr7:4397489-4397508 MsG0780036185.01.T01:intron 40.0%
GTGACATCTTTCACCTTAAC+AGG + Chr7:4401056-4401075 MsG0780036185.01.T01:intron 40.0%
GTGGATTCTGAATCAGTGAT+GGG - Chr7:4397212-4397231 None:intergenic 40.0%
GTTATTGTGCTTCTGTCAAG+TGG + Chr7:4395593-4395612 MsG0780036185.01.T01:CDS 40.0%
GTTCTCTTCCAACTTAACAG+AGG + Chr7:4398030-4398049 MsG0780036185.01.T01:intron 40.0%
TAACTGTGTATTTCGTGTGG+TGG - Chr7:4397713-4397732 None:intergenic 40.0%
TAGAGCTCCCAATGAGTAAT+TGG + Chr7:4400743-4400762 MsG0780036185.01.T01:intron 40.0%
TATGTGGAACTGTGGAAGTT+TGG + Chr7:4401721-4401740 MsG0780036185.01.T01:intron 40.0%
TCACCACAAGCATATAGTAG+AGG + Chr7:4397616-4397635 MsG0780036185.01.T01:intron 40.0%
TCCAACTTAACAGAGGTCAT+GGG + Chr7:4398037-4398056 MsG0780036185.01.T01:intron 40.0%
TGAGTATAGTTTCTGCTTGG+TGG + Chr7:4395624-4395643 MsG0780036185.01.T01:CDS 40.0%
TGCTAATCGGTTAACCTAGA+CGG + Chr7:4398625-4398644 MsG0780036185.01.T01:intron 40.0%
TTCCAACTTAACAGAGGTCA+TGG + Chr7:4398036-4398055 MsG0780036185.01.T01:intron 40.0%
TTCCCTCTGAGTCTAAAAGA+AGG - Chr7:4400482-4400501 None:intergenic 40.0%
TTCCGAAATTGGATCCTCTA+CGG + Chr7:4402368-4402387 MsG0780036185.01.T01:intron 40.0%
TTCCTGCATGGATAATATGG+TGG - Chr7:4400950-4400969 None:intergenic 40.0%
TTTCCCCATTCTGAGTTTGA+GGG + Chr7:4396019-4396038 MsG0780036185.01.T01:intron 40.0%
! AAAACATGTCAGTGTTGGGT+CGG - Chr7:4402468-4402487 None:intergenic 40.0%
! AACAGTGACTTTGGAGATGT+AGG - Chr7:4399389-4399408 None:intergenic 40.0%
! AAGTATGGTTCTGCAGTTGT+AGG + Chr7:4402394-4402413 MsG0780036185.01.T01:intron 40.0%
! ACAGATTCTGGCTATGACAA+AGG + Chr7:4399291-4399310 MsG0780036185.01.T01:intron 40.0%
! AGCACTAGTTGCTTTCTCAA+AGG - Chr7:4400234-4400253 None:intergenic 40.0%
! ATGTGACACACCTTTGTTGT+AGG + Chr7:4400431-4400450 MsG0780036185.01.T01:intron 40.0%
! CCTATGAAGCACCATACTTT+AGG + Chr7:4403170-4403189 MsG0780036185.01.T01:intron 40.0%
! CTTGTTATGGTATGCTACGT+CGG - Chr7:4397253-4397272 None:intergenic 40.0%
! GAGGTGTAGGAACTTACTTT+TGG - Chr7:4396943-4396962 None:intergenic 40.0%
! GATGCCGAAAATGGATTTAG+TGG - Chr7:4400177-4400196 None:intergenic 40.0%
! GATTGGGATAAAGGATTGGT+AGG + Chr7:4403033-4403052 MsG0780036185.01.T01:intron 40.0%
! GTTGCTTTCTCAAAGGTTCT+TGG - Chr7:4400227-4400246 None:intergenic 40.0%
! TCCGCCACTAAATCCATTTT+CGG + Chr7:4400170-4400189 MsG0780036185.01.T01:intron 40.0%
! TGTTTGGAACGAATTTCGGA+TGG - Chr7:4397125-4397144 None:intergenic 40.0%
! TTAATCAAGTCAGTAGTGGG+AGG + Chr7:4402696-4402715 MsG0780036185.01.T01:intron 40.0%
! TTGGGATAAAGGATTGGTAG+GGG + Chr7:4403035-4403054 MsG0780036185.01.T01:intron 40.0%
!! AAAGAAAGGCATTCAGGGAT+TGG + Chr7:4403016-4403035 MsG0780036185.01.T01:intron 40.0%
!! AAGAAAGGCATTCAGGGATT+GGG + Chr7:4403017-4403036 MsG0780036185.01.T01:intron 40.0%
!! ACCCTTCTGTTGAGGTATTT+TGG + Chr7:4401947-4401966 MsG0780036185.01.T01:intron 40.0%
!! AGAGGAAAAGAAAGGCATTC+AGG + Chr7:4403010-4403029 MsG0780036185.01.T01:intron 40.0%
!! ATCGTTTTTGCTTCGAGATC+GGG - Chr7:4397305-4397324 None:intergenic 40.0%
!! ATTTAGTGGCGGATTTCAAG+TGG - Chr7:4400163-4400182 None:intergenic 40.0%
!! GAGGAAAAGAAAGGCATTCA+GGG + Chr7:4403011-4403030 MsG0780036185.01.T01:intron 40.0%
!! GATCACTTTTGCTTCGAGTT+CGG - Chr7:4397433-4397452 None:intergenic 40.0%
!! GATCGTTTTTGCTTCGAGAT+CGG - Chr7:4397306-4397325 None:intergenic 40.0%
!! GGTTAAGCTTGTTGCCTTAT+TGG + Chr7:4395567-4395586 MsG0780036185.01.T01:CDS 40.0%
!! GTGGTAATGGAAACATAACC+AGG + Chr7:4397502-4397521 MsG0780036185.01.T01:intron 40.0%
!! GTGTTTTGTTGGGTTTTTGG+AGG - Chr7:4397174-4397193 None:intergenic 40.0%
!! TGATTCTAGCTTCTGCCTTA+TGG + Chr7:4395670-4395689 MsG0780036185.01.T01:intron 40.0%
!! TTCGGTTTGGTGCTAGATAT+CGG - Chr7:4396999-4397018 None:intergenic 40.0%
!! TTGACGAGATAGTTGATGGA+GGG + Chr7:4402113-4402132 MsG0780036185.01.T01:CDS 40.0%
!! TTTAGTGGCGGATTTCAAGT+GGG - Chr7:4400162-4400181 None:intergenic 40.0%
!!! ATTTTGGGTTGTGATTGAGC+TGG - Chr7:4397540-4397559 None:intergenic 40.0%
!!! GGTGTGAGAGGTATCTTTTT+CGG - Chr7:4402250-4402269 None:intergenic 40.0%
!!! GTATCTTTTTCGGCGATAAG+TGG - Chr7:4402240-4402259 None:intergenic 40.0%
!!! TTTTGGGTTGTGATTGAGCT+GGG - Chr7:4397539-4397558 None:intergenic 40.0%
AAACCTCTCTTATGCGTTGC+TGG - Chr7:4395773-4395792 None:intergenic 45.0%
AAACTTCACCATTCCACTGG+TGG - Chr7:4395864-4395883 None:intergenic 45.0%
AAGAAGAACAAAGACCGGCA+AGG + Chr7:4396879-4396898 MsG0780036185.01.T01:intron 45.0%
AAGACAAATGCTCGCACAGA+AGG + Chr7:4400591-4400610 MsG0780036185.01.T01:CDS 45.0%
AAGCTCTCGAATTCTTGGAG+GGG + Chr7:4403064-4403083 MsG0780036185.01.T01:intron 45.0%
ACACTGTTGAGTTTCCTGCA+TGG - Chr7:4400962-4400981 None:intergenic 45.0%
AGAAGGAGAGAATGTGACGA+GGG - Chr7:4400111-4400130 None:intergenic 45.0%
AGACCAAGCTCTCGAATTCT+TGG + Chr7:4403059-4403078 MsG0780036185.01.T01:intron 45.0%
AGGCAACAAACTGCCATATG+TGG + Chr7:4402492-4402511 MsG0780036185.01.T01:intron 45.0%
ATCATCTTCCACCAGTGGAA+TGG + Chr7:4395853-4395872 MsG0780036185.01.T01:intron 45.0%
ATCTGAGGATTTGACTGGGA+AGG + Chr7:4402765-4402784 MsG0780036185.01.T01:intron 45.0%
ATGAACACATTCAAGCGCCA+AGG - Chr7:4401259-4401278 None:intergenic 45.0%
ATGATGTTGAGGAGCTTGTG+GGG - Chr7:4397671-4397690 None:intergenic 45.0%
ATGCAATCACCCTTCTGTTG+AGG + Chr7:4401939-4401958 MsG0780036185.01.T01:CDS 45.0%
CAAGCTCTCGAATTCTTGGA+GGG + Chr7:4403063-4403082 MsG0780036185.01.T01:intron 45.0%
CAGGGATTGGGATAAAGGAT+TGG + Chr7:4403029-4403048 MsG0780036185.01.T01:intron 45.0%
CCATTCATGCTGTCAGATCA+AGG - Chr7:4397888-4397907 None:intergenic 45.0%
CCCAAGAAATTCGAGAGTCT+TGG - Chr7:4403096-4403115 None:intergenic 45.0%
CCTTGATCTGACAGCATGAA+TGG + Chr7:4397885-4397904 MsG0780036185.01.T01:intron 45.0%
CGACTCCTCACCTTATCAAT+CGG + Chr7:4400855-4400874 MsG0780036185.01.T01:intron 45.0%
CGGTTGGATGATGTCACTAT+GGG - Chr7:4396979-4396998 None:intergenic 45.0%
CTCCATCAACTATCTCGTCA+AGG - Chr7:4402114-4402133 None:intergenic 45.0%
CTTGTGGTGATACCTGAACT+AGG - Chr7:4397606-4397625 None:intergenic 45.0%
GACCTGCATTTCTTTGTCAC+TGG + Chr7:4401863-4401882 MsG0780036185.01.T01:CDS 45.0%
GATGATGTTGAGGAGCTTGT+GGG - Chr7:4397672-4397691 None:intergenic 45.0%
GCAAGGCACAAACAAGCAAA+GGG + Chr7:4396896-4396915 MsG0780036185.01.T01:intron 45.0%
GCACCATACTTTAGGTGTAG+AGG + Chr7:4403239-4403258 MsG0780036185.01.T01:intron 45.0%
GCAGGAAACTCAACAGTGTT+GGG + Chr7:4400963-4400982 MsG0780036185.01.T01:intron 45.0%
GCATTCAGGGATTGGGATAA+AGG + Chr7:4403024-4403043 MsG0780036185.01.T01:intron 45.0%
GGGATTCTTGTGGTGATTAG+TGG - Chr7:4397812-4397831 None:intergenic 45.0%
GGTGCTTCATAGGTTGTGAT+AGG - Chr7:4403163-4403182 None:intergenic 45.0%
GGTGTGTCACATGATACTTG+TGG - Chr7:4400423-4400442 None:intergenic 45.0%
TATGGTGCTTCATAGGGTGT+TGG - Chr7:4403227-4403246 None:intergenic 45.0%
TCGGTTGGATGATGTCACTA+TGG - Chr7:4396980-4396999 None:intergenic 45.0%
TCTGAGGATTTGACTGGGAA+GGG + Chr7:4402766-4402785 MsG0780036185.01.T01:intron 45.0%
TGCAGGAAACTCAACAGTGT+TGG + Chr7:4400962-4400981 MsG0780036185.01.T01:intron 45.0%
TGCCAGTGACAAAGAAATGC+AGG - Chr7:4401868-4401887 None:intergenic 45.0%
TGCCGTAGAGGATCCAATTT+CGG - Chr7:4402373-4402392 None:intergenic 45.0%
TGCCTTGACGAGATAGTTGA+TGG + Chr7:4402109-4402128 MsG0780036185.01.T01:CDS 45.0%
TGTTACAATGTTCTCTCCGG+TGG - Chr7:4397379-4397398 None:intergenic 45.0%
TTGAGTTCTGCAGTTGTGTG+AGG - Chr7:4397069-4397088 None:intergenic 45.0%
TTTGCTTGTTTGTGCCTTGC+CGG - Chr7:4396896-4396915 None:intergenic 45.0%
! ATTTCGTGTGGTGGTGAGTT+CGG - Chr7:4397704-4397723 None:intergenic 45.0%
! GAGGCTTTTATGCAAGTAGC+GGG - Chr7:4397155-4397174 None:intergenic 45.0%
! GCCGAAAATGGATTTAGTGG+CGG - Chr7:4400174-4400193 None:intergenic 45.0%
! GGAGGCTTTTATGCAAGTAG+CGG - Chr7:4397156-4397175 None:intergenic 45.0%
! GGTGGATTCTGAATCAGTGA+TGG - Chr7:4397213-4397232 None:intergenic 45.0%
! GGTGGTAAGCTTTTGCCTTA+TGG + Chr7:4395642-4395661 MsG0780036185.01.T01:intron 45.0%
! GTTGATGGAGGGTATGCATT+TGG + Chr7:4402124-4402143 MsG0780036185.01.T01:intron 45.0%
! TGGGATAAAGGATTGGTAGG+GGG + Chr7:4403036-4403055 MsG0780036185.01.T01:intron 45.0%
!! AAGAGAGGCACTTGAGAACT+TGG + Chr7:4402072-4402091 MsG0780036185.01.T01:CDS 45.0%
!! AAGGGGCCATTTTGGCATTA+GGG + Chr7:4402784-4402803 MsG0780036185.01.T01:intron 45.0%
!! AGTAGCGGGTGTTAGATGTT+TGG - Chr7:4397141-4397160 None:intergenic 45.0%
!! ATACATGTCGGTGTCGTGTA+TGG + Chr7:4402519-4402538 MsG0780036185.01.T01:intron 45.0%
!! CAGCGGGAATGTGTTTTGTT+GGG - Chr7:4397184-4397203 None:intergenic 45.0%
!! CTGTTGTTGGTGTTGAGTTG+GGG - Chr7:4397746-4397765 None:intergenic 45.0%
!! CTTGACGAGATAGTTGATGG+AGG + Chr7:4402112-4402131 MsG0780036185.01.T01:CDS 45.0%
!! GCTGTTGTTGGTGTTGAGTT+GGG - Chr7:4397747-4397766 None:intergenic 45.0%
!! GTGTTGAGTTGGGGTTTGAA+CGG - Chr7:4397737-4397756 None:intergenic 45.0%
!! GTTTGGTGCTAGATATCGGT+TGG - Chr7:4396995-4397014 None:intergenic 45.0%
!! TTCTAGCTTCTGCCTTATGG+TGG + Chr7:4395673-4395692 MsG0780036185.01.T01:intron 45.0%
!!! CTTGTGGGGTGTGTTGTTTT+TGG - Chr7:4397657-4397676 None:intergenic 45.0%
!!! TGGGGTGTGTTGTTTTTGGA+GGG - Chr7:4397653-4397672 None:intergenic 45.0%
!!! TTGGCTCGTGGTAGTTTTAG+TGG - Chr7:4397778-4397797 None:intergenic 45.0%
AAGCCAGCAACGCATAAGAG+AGG + Chr7:4395767-4395786 MsG0780036185.01.T01:intron 50.0%
AATTGGGCATCTTCCACCAG+TGG + Chr7:4395827-4395846 MsG0780036185.01.T01:intron 50.0%
AGCCTCCCTCAAACTCAGAA+TGG - Chr7:4396027-4396046 None:intergenic 50.0%
ATGTGACGAGGGAGAAAGTG+AGG - Chr7:4400100-4400119 None:intergenic 50.0%
ATTGTATGTGTGTCTCGCGC+GGG + Chr7:4400025-4400044 MsG0780036185.01.T01:intron 50.0%
CATTGTATGTGTGTCTCGCG+CGG + Chr7:4400024-4400043 MsG0780036185.01.T01:intron 50.0%
CCAAGCTCTCGAATTCTTGG+AGG + Chr7:4403062-4403081 MsG0780036185.01.T01:intron 50.0%
CCTCCAAGAATTCGAGAGCT+TGG - Chr7:4403065-4403084 None:intergenic 50.0%
CCTCCCTCAAACTCAGAATG+GGG - Chr7:4396025-4396044 None:intergenic 50.0%
CGATGATGTTGAGGAGCTTG+TGG - Chr7:4397673-4397692 None:intergenic 50.0%
CTGAGGATTTGACTGGGAAG+GGG + Chr7:4402767-4402786 MsG0780036185.01.T01:intron 50.0%
GAACCATACTTCTGCCGTAG+AGG - Chr7:4402385-4402404 None:intergenic 50.0%
GAGAAGGAGAGAATGTGACG+AGG - Chr7:4400112-4400131 None:intergenic 50.0%
GATCCTCTACGGCAGAAGTA+TGG + Chr7:4402379-4402398 MsG0780036185.01.T01:intron 50.0%
GCACCTCCCTAATGCCAAAA+TGG - Chr7:4402793-4402812 None:intergenic 50.0%
GCCCATGACCTCTGTTAAGT+TGG - Chr7:4398041-4398060 None:intergenic 50.0%
GCCTCCCTCAAACTCAGAAT+GGG - Chr7:4396026-4396045 None:intergenic 50.0%
GGAAGATGATGATCCACTGG+TGG - Chr7:4395843-4395862 None:intergenic 50.0%
GGAGAGAAGGGAAGATTGAG+GGG + Chr7:4402741-4402760 MsG0780036185.01.T01:intron 50.0%
GGAGTTTGGCGATGATGTTG+AGG - Chr7:4397682-4397701 None:intergenic 50.0%
GGATCATCATCTTCCACCAG+TGG + Chr7:4395848-4395867 MsG0780036185.01.T01:intron 50.0%
GGCAAGGCACAAACAAGCAA+AGG + Chr7:4396895-4396914 MsG0780036185.01.T01:intron 50.0%
GGCTGAACTGATGCCGAAAA+TGG - Chr7:4400186-4400205 None:intergenic 50.0%
GGGAGAGAAGGGAAGATTGA+GGG + Chr7:4402740-4402759 MsG0780036185.01.T01:intron 50.0%
GGGCATCTGAGGATTTGACT+GGG + Chr7:4402761-4402780 MsG0780036185.01.T01:intron 50.0%
GGTGGAAGATGATGATCCAC+TGG - Chr7:4395846-4395865 None:intergenic 50.0%
GTCAGCATCTATGGTGTGAG+AGG - Chr7:4402262-4402281 None:intergenic 50.0%
TAGCACTACCTGCTCAGACA+AGG - Chr7:4402289-4402308 None:intergenic 50.0%
TGTGACGAGGGAGAAAGTGA+GGG - Chr7:4400099-4400118 None:intergenic 50.0%
! CACGCGCTCTTGCCAATTTT+GGG - Chr7:4397571-4397590 None:intergenic 50.0%
! GCAGCGGGAATGTGTTTTGT+TGG - Chr7:4397185-4397204 None:intergenic 50.0%
! TGGGCGTGATGGAGTGTATT+GGG + Chr7:4400982-4401001 MsG0780036185.01.T01:intron 50.0%
! TTGGGCGTGATGGAGTGTAT+TGG + Chr7:4400981-4401000 MsG0780036185.01.T01:intron 50.0%
! TTTCGTGTGGTGGTGAGTTC+GGG - Chr7:4397703-4397722 None:intergenic 50.0%
!! GAAGGGGCCATTTTGGCATT+AGG + Chr7:4402783-4402802 MsG0780036185.01.T01:intron 50.0%
!! GGCTGTTGTTGGTGTTGAGT+TGG - Chr7:4397748-4397767 None:intergenic 50.0%
!! GTGGTGTTAATGTTGGCTCG+TGG - Chr7:4397790-4397809 None:intergenic 50.0%
!!! GTGGGGTGTGTTGTTTTTGG+AGG - Chr7:4397654-4397673 None:intergenic 50.0%
ATCCACCACCAATCAACCCC+TGG + Chr7:4397226-4397245 MsG0780036185.01.T01:intron 55.0%
ATGGTATGCTACGTCGGACC+AGG - Chr7:4397247-4397266 None:intergenic 55.0%
CAAGGCGGAGTCAGCATCTA+TGG - Chr7:4402271-4402290 None:intergenic 55.0%
CACTACCTGCTCAGACAAGG+CGG - Chr7:4402286-4402305 None:intergenic 55.0%
CCCCATTCTGAGTTTGAGGG+AGG + Chr7:4396022-4396041 MsG0780036185.01.T01:intron 55.0%
CGAGGGAGAAAGTGAGGGTT+TGG - Chr7:4400094-4400113 None:intergenic 55.0%
CGCAGAGATGGACCTAGTTC+AGG + Chr7:4397591-4397610 MsG0780036185.01.T01:intron 55.0%
GCAGACGCTAACGCAAGCAT+GGG + Chr7:4403444-4403463 MsG0780036185.01.T01:intron 55.0%
GGGGAGAGAAGGGAAGATTG+AGG + Chr7:4402739-4402758 MsG0780036185.01.T01:intron 55.0%
TCCGGTGGTTCGAGAGTTGA+GGG - Chr7:4397364-4397383 None:intergenic 55.0%
TGCAGACGCTAACGCAAGCA+TGG + Chr7:4403443-4403462 MsG0780036185.01.T01:intron 55.0%
TGGTATGCTACGTCGGACCA+GGG - Chr7:4397246-4397265 None:intergenic 55.0%
TTGTATGTGTGTCTCGCGCG+GGG + Chr7:4400026-4400045 MsG0780036185.01.T01:intron 55.0%
! CGTGTGCTGCTATTGCAACC+TGG + Chr7:4399760-4399779 MsG0780036185.01.T01:intron 55.0%
! CTCAACAGTGTTGGGCGTGA+TGG + Chr7:4400971-4400990 MsG0780036185.01.T01:intron 55.0%
! GCACGCGCTCTTGCCAATTT+TGG - Chr7:4397572-4397591 None:intergenic 55.0%
! GGGGCATCTGAGGATTTGAC+TGG + Chr7:4402760-4402779 MsG0780036185.01.T01:intron 55.0%
! GTGCTGCTATTGCAACCTGG+TGG + Chr7:4399763-4399782 MsG0780036185.01.T01:intron 55.0%
! TGACTGGGAAGGGGCCATTT+TGG + Chr7:4402776-4402795 MsG0780036185.01.T01:intron 55.0%
! TGGTGGTGAGTTCGGGAGTT+TGG - Chr7:4397696-4397715 None:intergenic 55.0%
!! AGTGGCGGATTTCAAGTGGG+AGG - Chr7:4400159-4400178 None:intergenic 55.0%
!! ATCAGTGATGGGCTCAGCAG+CGG - Chr7:4397201-4397220 None:intergenic 55.0%
!! GGAAGATTGAGGGGCATCTG+AGG + Chr7:4402750-4402769 MsG0780036185.01.T01:intron 55.0%
!! GGGCCATTTTGGCATTAGGG+AGG + Chr7:4402787-4402806 MsG0780036185.01.T01:intron 55.0%
!!! CGTGGTAGTTTTAGTGGCGC+TGG - Chr7:4397772-4397791 None:intergenic 55.0%
!!! GGTAGTTTTAGTGGCGCTGG+TGG - Chr7:4397769-4397788 None:intergenic 55.0%
CCCCTCAACTCTCGAACCAC+CGG + Chr7:4397360-4397379 MsG0780036185.01.T01:intron 60.0%
CCGGTGGTTCGAGAGTTGAG+GGG - Chr7:4397363-4397382 None:intergenic 60.0%
CTCCGGTGGTTCGAGAGTTG+AGG - Chr7:4397365-4397384 None:intergenic 60.0%
GGTATGCTACGTCGGACCAG+GGG - Chr7:4397245-4397264 None:intergenic 60.0%
TGACTCCGCCTTGTCTGAGC+AGG + Chr7:4402278-4402297 MsG0780036185.01.T01:CDS 60.0%
! ACGTCGGACCAGGGGTTGAT+TGG - Chr7:4397237-4397256 None:intergenic 60.0%
! AGCTGGGCACTTTTCCGACC+TGG - Chr7:4397523-4397542 None:intergenic 60.0%
! GACCAGGGGTTGATTGGTGG+TGG - Chr7:4397231-4397250 None:intergenic 60.0%
! TCGGACCAGGGGTTGATTGG+TGG - Chr7:4397234-4397253 None:intergenic 60.0%
! TGTCAGTGTTGGGTCGGCGT+TGG - Chr7:4402462-4402481 None:intergenic 60.0%
!! TCAGTGATGGGCTCAGCAGC+GGG - Chr7:4397200-4397219 None:intergenic 60.0%
! CAAGAGCGCGTGCGCAGAGA+TGG + Chr7:4397579-4397598 MsG0780036185.01.T01:intron 65.0%
!! GTGGCGCTGGTGGCTGTTGT+TGG - Chr7:4397759-4397778 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 4395565 4403507 4395565 ID=MsG0780036185.01;Name=MsG0780036185.01
Chr7 mRNA 4395565 4403507 4395565 ID=MsG0780036185.01.T01;Parent=MsG0780036185.01;Name=MsG0780036185.01.T01;_AED=0.18;_eAED=0.18;_QI=0|0|0|0.83|0.8|0.66|6|0|203
Chr7 exon 4395565 4395645 4395565 ID=MsG0780036185.01.T01:exon:2466;Parent=MsG0780036185.01.T01
Chr7 exon 4400453 4400612 4400453 ID=MsG0780036185.01.T01:exon:2467;Parent=MsG0780036185.01.T01
Chr7 exon 4401813 4401960 4401813 ID=MsG0780036185.01.T01:exon:2468;Parent=MsG0780036185.01.T01
Chr7 exon 4402057 4402134 4402057 ID=MsG0780036185.01.T01:exon:2469;Parent=MsG0780036185.01.T01
Chr7 exon 4402215 4402299 4402215 ID=MsG0780036185.01.T01:exon:2470;Parent=MsG0780036185.01.T01
Chr7 exon 4403448 4403507 4403448 ID=MsG0780036185.01.T01:exon:2471;Parent=MsG0780036185.01.T01
Chr7 CDS 4395565 4395645 4395565 ID=MsG0780036185.01.T01:cds;Parent=MsG0780036185.01.T01
Chr7 CDS 4400453 4400612 4400453 ID=MsG0780036185.01.T01:cds;Parent=MsG0780036185.01.T01
Chr7 CDS 4401813 4401960 4401813 ID=MsG0780036185.01.T01:cds;Parent=MsG0780036185.01.T01
Chr7 CDS 4402057 4402134 4402057 ID=MsG0780036185.01.T01:cds;Parent=MsG0780036185.01.T01
Chr7 CDS 4402215 4402299 4402215 ID=MsG0780036185.01.T01:cds;Parent=MsG0780036185.01.T01
Chr7 CDS 4403448 4403507 4403448 ID=MsG0780036185.01.T01:cds;Parent=MsG0780036185.01.T01
Gene Sequence

>MsG0780036185.01.T01

GTGGTTAAGCTTGTTGCCTTATTGGCTTGTTATTGTGCTTCTGTCAAGTGGTTAAACTCTGAGTATAGTTTCTGCTTGGTGGTTTCATGTCCTATGATAAAAAATATCCTTCTTTTAGACTCAGAGGGAAAGCGTGTTGCAGTCAAGTATTTTTCAGATGACTGGCCAACAAATAGTTCAAAACTAGCTTTTGAGAAGTTTGTGTTCACCAAGACTATCAAGACAAATGCTCGCACAGAAGCTGAAATAACATTACTTGAGAACAATATCATTATTTACAAATTTGCACAAGACCTGCATTTCTTTGTCACTGGCAGCGATGACGAAAATGAGATTGTTTTAGCTTCAGTTCTTCAGGGCTTCTTTGATGCAATCACCCTTCTGTTGAGGAATAATGTTGACAAAAGAGAGGCACTTGAGAACTTGGATCTCATTCTGTTATGCCTTGACGAGATAGTTGATGGAGGGATGATACTTGAAACAAGTGGACCACTTATCGCCGAAAAAGATACCTCTCACACCATAGATGCTGACTCCGCCTTGTCTGAGCAGACGCTAACGCAAGCATGGGCAACAGCTAGAGAACATTTGACAAGAACCCTTCTAAAATGA
Protein sequence

>MsG0780036185.01.T01

VVKLVALLACYCASVKWLNSEYSFCLVVSCPMIKNILLLDSEGKRVAVKYFSDDWPTNSSKLAFEKFVFTKTIKTNARTEAEITLLENNIIIYKFAQDLHFFVTGSDDENEIVLASVLQGFFDAITLLLRNNVDKREALENLDLILLCLDEIVDGGMILETSGPLIAEKDTSHTIDADSALSEQTLTQAWATAREHLTRTLLK*