AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036299.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036299.01.T01 MTR_7g011080 97.373 571 13 1 1 569 1 571 0.0 1115
MsG0780036299.01.T01 MTR_6g012630 68.237 573 158 10 1 569 1 553 0.0 690
MsG0780036299.01.T01 MTR_6g012630 69.455 550 150 9 1 546 1 536 0.0 679
MsG0780036299.01.T01 MTR_6g012630 70.387 439 114 7 1 435 1 427 0.0 564
MsG0780036299.01.T01 MTR_6g012630 30.851 188 113 3 299 472 50 234 1.08e-20 95.5
MsG0780036299.01.T01 MTR_2g019090 32.605 549 302 16 21 524 22 547 8.27e-73 244
MsG0780036299.01.T01 MTR_2g019090 32.423 549 302 17 21 524 22 546 6.96e-71 239
MsG0780036299.01.T01 MTR_2g019090 26.149 348 199 8 47 364 310 629 5.85e-26 112
MsG0780036299.01.T01 MTR_3g110650 34.623 491 232 11 27 459 15 474 8.94e-68 232
MsG0780036299.01.T01 MTR_4g093650 34.802 454 248 11 32 459 4 435 1.91e-64 222
MsG0780036299.01.T01 MTR_4g093650 29.863 365 178 14 13 329 242 576 2.29e-26 114
MsG0780036299.01.T01 MTR_4g008080 31.333 450 240 13 24 464 3 392 1.39e-53 192
MsG0780036299.01.T01 MTR_3g091800 28.571 434 279 9 49 459 63 488 4.07e-45 169
MsG0780036299.01.T01 MTR_3g091800 30.045 223 124 7 3 225 293 483 4.73e-20 94.4
MsG0780036299.01.T01 MTR_3g091800 35.263 190 98 6 288 455 53 239 4.93e-19 91.3
MsG0780036299.01.T01 MTR_2g009650 29.376 497 266 18 25 459 27 500 7.30e-42 161
MsG0780036299.01.T01 MTR_5g031720 29.505 444 285 10 39 471 29 455 1.31e-39 153
MsG0780036299.01.T01 MTR_7g082290 50.888 169 48 5 358 526 12 145 1.62e-32 124
MsG0780036299.01.T01 MTR_7g080630 28.621 290 150 9 48 331 99 337 6.41e-26 110
MsG0780036299.01.T01 MTR_7g080630 30.928 194 121 4 299 483 103 292 1.16e-13 73.2
MsG0780036299.01.T01 MTR_7g080630 32.979 188 109 4 48 231 99 273 5.50e-25 105
MsG0780036299.01.T01 MTR_7g080630 30.928 194 121 4 299 483 103 292 1.24e-13 72.4
MsG0780036299.01.T01 MTR_7g080630 32.979 188 109 4 48 231 99 273 1.58e-24 104
MsG0780036299.01.T01 MTR_7g080630 30.928 194 121 4 299 483 103 292 2.07e-13 71.6
MsG0780036299.01.T01 MTR_1g070380 35.955 178 101 3 48 225 164 328 7.80e-23 102
MsG0780036299.01.T01 MTR_1g070380 30.508 177 116 2 291 461 160 335 4.69e-15 78.6
MsG0780036299.01.T01 MTR_7g115340 29.084 251 138 7 48 285 46 269 5.43e-22 99.4
MsG0780036299.01.T01 MTR_7g115340 25.281 178 132 1 285 461 36 213 1.28e-15 79.7
MsG0780036299.01.T01 MTR_7g115340 25.816 337 177 10 48 334 114 427 7.63e-22 99.4
MsG0780036299.01.T01 MTR_7g115340 25.281 178 132 1 285 461 104 281 1.98e-15 79.7
MsG0780036299.01.T01 MTR_1g070380 35.754 179 101 4 48 225 164 329 2.20e-21 98.6
MsG0780036299.01.T01 MTR_1g070380 30.899 178 115 3 291 461 160 336 3.96e-14 75.5
MsG0780036299.01.T01 MTR_2g038020 33.520 179 107 2 48 226 69 235 1.29e-20 95.5
MsG0780036299.01.T01 MTR_2g038020 30.729 192 122 2 285 470 59 245 1.67e-17 85.9
MsG0780036299.01.T01 MTR_4g127380 34.694 196 115 3 30 225 26 208 2.88e-20 94.0
MsG0780036299.01.T01 MTR_4g127380 31.217 189 119 2 288 470 36 219 5.21e-15 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036299.01.T01 AT5G15270 60.000 540 191 12 11 548 17 533 0.0 619
MsG0780036299.01.T01 AT5G15270 60.038 528 186 12 11 536 17 521 0.0 605
MsG0780036299.01.T01 AT5G15270 60.038 528 186 12 11 536 17 521 0.0 605
MsG0780036299.01.T01 AT1G14170 51.158 475 188 9 26 492 25 463 7.93e-141 417
MsG0780036299.01.T01 AT1G14170 51.422 457 182 7 44 492 14 438 1.06e-139 413
MsG0780036299.01.T01 AT1G14170 51.656 453 179 7 48 492 10 430 5.65e-139 410
MsG0780036299.01.T01 AT5G46190 35.358 461 244 12 49 471 44 488 3.43e-71 241
MsG0780036299.01.T01 AT5G46190 29.141 326 155 10 52 334 320 612 2.87e-26 114
MsG0780036299.01.T01 AT5G46190 35.358 461 244 12 49 471 44 488 3.43e-71 241
MsG0780036299.01.T01 AT5G46190 29.141 326 155 10 52 334 320 612 2.87e-26 114
MsG0780036299.01.T01 AT5G46190 35.358 461 244 12 49 471 44 488 3.43e-71 241
MsG0780036299.01.T01 AT5G46190 29.141 326 155 10 52 334 320 612 2.87e-26 114
MsG0780036299.01.T01 AT5G46190 35.408 466 245 13 46 471 39 488 2.32e-70 239
MsG0780036299.01.T01 AT5G46190 28.571 315 149 10 52 323 320 601 7.85e-24 106
MsG0780036299.01.T01 AT4G18375 30.796 565 300 21 23 537 7 530 8.64e-64 218
MsG0780036299.01.T01 AT4G18375 30.973 565 299 21 23 537 7 530 4.35e-63 218
MsG0780036299.01.T01 AT4G18375 27.640 322 166 10 47 346 310 586 5.85e-24 106
MsG0780036299.01.T01 AT1G51580 31.798 456 256 13 36 459 5 437 4.08e-55 197
MsG0780036299.01.T01 AT1G51580 28.283 198 121 5 30 227 258 434 4.62e-21 97.8
MsG0780036299.01.T01 AT5G53060 30.684 453 263 12 38 461 57 487 6.26e-52 187
MsG0780036299.01.T01 AT5G53060 29.612 206 121 6 23 225 296 480 3.03e-17 85.5
MsG0780036299.01.T01 AT5G53060 30.684 453 263 12 38 461 57 487 4.52e-51 186
MsG0780036299.01.T01 AT5G53060 24.363 353 217 10 23 346 296 627 2.54e-17 85.9
MsG0780036299.01.T01 AT2G03110 50.327 153 72 3 82 231 1 152 5.35e-39 140
MsG0780036299.01.T01 AT2G03110 50.327 153 72 3 82 231 1 152 5.35e-39 140
MsG0780036299.01.T01 AT2G03110 50.327 153 72 3 82 231 1 152 5.35e-39 140
MsG0780036299.01.T01 AT2G22600 27.897 466 286 13 26 462 2 446 1.14e-32 133
MsG0780036299.01.T01 AT4G18375 33.688 282 130 11 264 537 85 317 2.02e-29 120
MsG0780036299.01.T01 AT4G18375 27.794 349 170 13 47 373 97 385 5.86e-25 107
MsG0780036299.01.T01 AT5G64390 36.872 179 109 1 285 459 441 619 6.75e-27 116
MsG0780036299.01.T01 AT5G64390 34.197 193 109 4 38 228 441 617 2.25e-26 114
MsG0780036299.01.T01 AT5G64390 32.461 191 99 3 51 227 49 223 6.24e-23 103
MsG0780036299.01.T01 AT5G64390 33.152 184 79 6 297 450 48 217 3.35e-14 76.3
MsG0780036299.01.T01 AT5G64390 36.872 179 109 1 285 459 441 619 7.12e-27 116
MsG0780036299.01.T01 AT5G64390 34.197 193 109 4 38 228 441 617 2.57e-26 114
MsG0780036299.01.T01 AT5G64390 32.461 191 99 3 51 227 49 223 6.70e-23 103
MsG0780036299.01.T01 AT5G64390 33.152 184 79 6 297 450 48 217 3.93e-14 76.3
MsG0780036299.01.T01 AT5G64390 36.872 179 109 1 285 459 441 619 7.69e-27 116
MsG0780036299.01.T01 AT5G64390 34.197 193 109 4 38 228 441 617 2.27e-26 114
MsG0780036299.01.T01 AT5G64390 32.461 191 99 3 51 227 49 223 7.08e-23 103
MsG0780036299.01.T01 AT5G64390 33.152 184 79 6 297 450 48 217 3.68e-14 76.3
MsG0780036299.01.T01 AT3G04610 33.146 178 105 2 48 225 162 325 1.04e-23 105
MsG0780036299.01.T01 AT3G04610 27.528 178 125 1 288 461 155 332 1.25e-16 83.6
MsG0780036299.01.T01 AT3G04610 33.146 178 105 2 48 225 162 325 1.04e-23 105
MsG0780036299.01.T01 AT3G04610 27.528 178 125 1 288 461 155 332 1.25e-16 83.6
MsG0780036299.01.T01 AT3G04610 34.270 178 103 3 48 225 186 349 1.34e-23 105
MsG0780036299.01.T01 AT3G04610 27.528 178 125 1 288 461 179 356 1.69e-16 83.2
MsG0780036299.01.T01 AT3G04610 34.270 178 103 3 48 225 186 349 1.34e-23 105
MsG0780036299.01.T01 AT3G04610 27.528 178 125 1 288 461 179 356 1.69e-16 83.2
MsG0780036299.01.T01 AT4G26000 32.022 178 109 2 48 225 73 238 1.16e-21 99.0
MsG0780036299.01.T01 AT4G26000 32.222 180 114 3 288 460 66 244 4.42e-15 78.6
MsG0780036299.01.T01 AT5G09560 27.982 218 125 6 16 228 279 469 5.04e-16 81.6
MsG0780036299.01.T01 AT5G09560 29.778 225 131 6 312 509 320 544 7.49e-15 78.2
MsG0780036299.01.T01 AT5G04430 25.974 308 169 12 28 331 17 269 2.65e-11 65.5
MsG0780036299.01.T01 AT5G04430 26.688 311 184 14 28 331 17 290 4.64e-11 65.1

Find 222 sgRNAs with CRISPR-Local

Find 366 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCGAATTGGTTGCCTTAT+TGG 0.136643 7:+6126652 MsG0780036299.01.T01:CDS
TCATGGTGGGGCTCCAATTA+TGG 0.148669 7:+6126117 MsG0780036299.01.T01:CDS
CTCTTTCACTAGCCGGTTAC+TGG 0.187699 7:+6126621 MsG0780036299.01.T01:CDS
TTGCTTACTTCTGCAGTTCC+TGG 0.200050 7:+6126061 MsG0780036299.01.T01:CDS
CAGTTTAGGCAGTAGGCTTC+AGG 0.210067 7:-6127783 None:intergenic
ATCGGAGCCATTCCCATAAT+TGG 0.245633 7:-6126130 None:intergenic
TTTGAATAATATAATGATAT+TGG 0.256594 7:+6128155 MsG0780036299.01.T01:three_prime_UTR
GGAGTGGTTTCGTCGGTGTT+AGG 0.267122 7:-6123658 None:intergenic
AATCAAATTAGGCAGGATTC+TGG 0.274868 7:+6126313 MsG0780036299.01.T01:CDS
CTTGGTCGAGGTGGTCCTTA+TGG 0.280832 7:+6127280 MsG0780036299.01.T01:CDS
GCTTAGGAAGTAAGGTAAAA+TGG 0.285966 7:-6127944 None:intergenic
GCTAACATTGGAGGTGTTAT+AGG 0.305964 7:+6126271 MsG0780036299.01.T01:CDS
TCAGGTGGATGGAGGGGATT+TGG 0.309548 7:+6124799 MsG0780036299.01.T01:intron
TTGATCCTCCTTTACCAATA+AGG 0.310702 7:-6126666 None:intergenic
TTTGTGAATTTGTGAGTTTA+GGG 0.317211 7:-6123525 None:intergenic
TTTGCATCTGGCGACGGTTA+TGG 0.318019 7:+6127127 MsG0780036299.01.T01:CDS
GTTTGTGAATTTGTGAGTTT+AGG 0.318513 7:-6123526 None:intergenic
CAACCTTGATGCCTCTATCT+AGG 0.320441 7:+6127884 MsG0780036299.01.T01:three_prime_UTR
GAGAAAGTTGAAAGAGATTC+TGG 0.321272 7:+6126592 MsG0780036299.01.T01:CDS
GGCAGATTGTTCAGAATATA+AGG 0.321391 7:+6124879 MsG0780036299.01.T01:CDS
TGAGATTGCTGTTGTGAAAA+AGG 0.325029 7:+6125985 MsG0780036299.01.T01:CDS
CTTTGTCCGGTTCGCAAAAT+CGG 0.328779 7:+6123727 MsG0780036299.01.T01:CDS
ACGGAACGGACTAGTACTTC+TGG 0.328930 7:+6127322 MsG0780036299.01.T01:CDS
ACCAGAATCTTCAAAATCAT+TGG 0.331469 7:-6123881 None:intergenic
TGCTTACTTCTGCAGTTCCT+GGG 0.334858 7:+6126062 MsG0780036299.01.T01:CDS
TTGAAACCATCTGGTCCTTC+TGG 0.338732 7:-6127028 None:intergenic
CGCAAAATCGGCAGCATCAT+TGG 0.340343 7:+6123739 MsG0780036299.01.T01:CDS
GGTGGTCCTTATGGAGCTTA+TGG 0.351103 7:+6127289 MsG0780036299.01.T01:CDS
GAATTCTGATGAGCTTGTTC+AGG 0.354751 7:+6124961 MsG0780036299.01.T01:CDS
GCTCCGATTGGTGGTGGTTA+TGG 0.363624 7:+6126145 MsG0780036299.01.T01:CDS
CTATCCACGGTCCATGTATC+CGG 0.368979 7:+6126192 MsG0780036299.01.T01:CDS
CTGAAGCCTACTGCCTAAAC+TGG 0.371136 7:+6127784 MsG0780036299.01.T01:three_prime_UTR
TTCAATAGTCTCCACATGTT+TGG 0.377132 7:-6127910 None:intergenic
CAATGGTGGGTTCTCATGGT+GGG 0.382167 7:+6126104 MsG0780036299.01.T01:CDS
TAGGGAGATCCTCCTTAGAT+AGG 0.383114 7:-6126732 None:intergenic
TAACATCCGCATCCTATCTA+AGG 0.386726 7:+6126720 MsG0780036299.01.T01:CDS
CATGGTGGGGCTCCAATTAT+GGG 0.388437 7:+6126118 MsG0780036299.01.T01:CDS
GGTGGTTATGGAGGGTATAA+AGG 0.389407 7:+6126157 MsG0780036299.01.T01:CDS
GTGGTATAATAAATCAAATT+AGG 0.394131 7:+6126302 MsG0780036299.01.T01:CDS
ATCAAATTAGGCAGGATTCT+GGG 0.396448 7:+6126314 MsG0780036299.01.T01:CDS
AACGGTAAACGGTGTCGTCT+TGG 0.400100 7:-6123702 None:intergenic
CGGACAAAGGTAACGGTAAA+CGG 0.401582 7:-6123713 None:intergenic
CCCAGTGACTGACAAATTCA+TGG 0.406816 7:+6127860 MsG0780036299.01.T01:three_prime_UTR
AGGGTTACGGCGTTTGTTGT+TGG 0.407039 7:-6123638 None:intergenic
TGACTGCTTAATAGCCATTT+CGG 0.407826 7:+6126375 MsG0780036299.01.T01:CDS
TGAAGATGAAGACGTTGATA+TGG 0.412280 7:+6123978 MsG0780036299.01.T01:CDS
ACGGTAAACGGTGTCGTCTT+GGG 0.416434 7:-6123701 None:intergenic
GTATGCGGTCGGTGGTTCAA+TGG 0.418238 7:+6126087 MsG0780036299.01.T01:CDS
GAGTGGTTTCGTCGGTGTTA+GGG 0.420306 7:-6123657 None:intergenic
GGCGACGGTTATGGAAACTA+TGG 0.421841 7:+6127136 MsG0780036299.01.T01:CDS
TTCTACCTCTCTCGCCGAAA+TGG 0.422570 7:-6126389 None:intergenic
CTGCTATGGATGCGCTTGTC+AGG 0.423616 7:+6123917 MsG0780036299.01.T01:CDS
TGCACAGATTAGGATTCTTA+AGG 0.423719 7:+6124913 MsG0780036299.01.T01:CDS
GCCATGAATTTGTCAGTCAC+TGG 0.424683 7:-6127861 None:intergenic
TTTCGTCGGTGTTAGGGTTA+CGG 0.427146 7:-6123651 None:intergenic
GATCAGATTGGGTGTGTGAT+TGG 0.428636 7:+6124848 MsG0780036299.01.T01:CDS
AACCATGGTTACTAAAACCT+TGG 0.433601 7:+6127558 MsG0780036299.01.T01:exon
GGAGGGTATAAAGGTGATGT+TGG 0.439030 7:+6126166 MsG0780036299.01.T01:CDS
GGGTGTGTGATTGGGAAAGG+TGG 0.439775 7:+6124857 MsG0780036299.01.T01:CDS
CAGGAACAGTTTCACCGATT+CGG 0.441185 7:-6123813 None:intergenic
TCTGGTCCTTCTGGCGAAGC+AGG 0.442517 7:-6127019 None:intergenic
GTGAGACCGGTGCACAGATT+AGG 0.445354 7:+6124903 MsG0780036299.01.T01:CDS
TTCAACTTTCTCACTGCACC+GGG 0.446932 7:-6126581 None:intergenic
ATCCCTTGAGCCCGGATACA+TGG 0.451086 7:-6126203 None:intergenic
AACCTTGATGCCTCTATCTA+GGG 0.451615 7:+6127885 MsG0780036299.01.T01:three_prime_UTR
TACTTGCACAAGAGCGTCCT+TGG 0.454929 7:-6126918 None:intergenic
CGTCTTCCAGTTTAGGCAGT+AGG 0.458624 7:-6127790 None:intergenic
CCTTCATAGTTGAAACCATC+TGG 0.458835 7:-6127037 None:intergenic
TATTCTTATTCTGATGGCTA+TGG 0.459228 7:+6127091 MsG0780036299.01.T01:CDS
TCGCTGAATCTGCAGATCTC+TGG 0.459290 7:+6125962 MsG0780036299.01.T01:intron
GTTATGTGAAATGTGTCTCT+TGG 0.468813 7:-6123679 None:intergenic
TGAGTTTATGTGTCCTGCTA+TGG 0.469447 7:+6123903 MsG0780036299.01.T01:CDS
AGTTTAGGCAGTAGGCTTCA+GGG 0.470110 7:-6127782 None:intergenic
GTATTCTCTCTTTCACTAGC+CGG 0.470671 7:+6126614 MsG0780036299.01.T01:CDS
AAATATCAAGGTTGATAGTT+CGG 0.471588 7:+6126339 MsG0780036299.01.T01:CDS
CGAATCGGTGAAACTGTTCC+TGG 0.473240 7:+6123814 MsG0780036299.01.T01:CDS
GTTCGCAAGCTTAGGAAGTA+AGG 0.474273 7:-6127952 None:intergenic
GGTTCAATGGTGGGTTCTCA+TGG 0.474828 7:+6126100 MsG0780036299.01.T01:CDS
TTCTCACAATTCACAATGGC+TGG 0.477989 7:+6123553 MsG0780036299.01.T01:exon
CATTGGAGGTGTTATAGGTA+AGG 0.479056 7:+6126276 MsG0780036299.01.T01:CDS
CGGAACGGACTAGTACTTCT+GGG 0.479809 7:+6127323 MsG0780036299.01.T01:CDS
CCGATTGGTGGTGGTTATGG+AGG 0.480814 7:+6126148 MsG0780036299.01.T01:CDS
TGCAACTGAAGATGATGAAA+TGG 0.481672 7:+6126759 MsG0780036299.01.T01:CDS
TTCATCTCGTCTTCCAGTTT+AGG 0.485689 7:-6127797 None:intergenic
ATTTAACGCACAAGACTGTA+AGG 0.488292 7:-6128193 None:intergenic
TGTGTTTATGCAGTTCTTTG+AGG 0.490670 7:+6126516 MsG0780036299.01.T01:intron
ATTGGTTGCCTTATTGGTAA+AGG 0.491056 7:+6126658 MsG0780036299.01.T01:CDS
TTTCAACTTTCTCACTGCAC+CGG 0.491500 7:-6126582 None:intergenic
AGATAGTACAGGTATACAAC+TGG 0.491875 7:-6128075 None:intergenic
CTGGTGTCAAGCTCTCGAAT+TGG 0.492427 7:+6126640 MsG0780036299.01.T01:CDS
GAGAGCTTGACACCAGTAAC+CGG 0.492678 7:-6126633 None:intergenic
CTTGTGGCGTCTGATCAGAT+TGG 0.495578 7:+6124836 MsG0780036299.01.T01:CDS
GAGCACATGTTCGCAAGCTT+AGG 0.498749 7:-6127960 None:intergenic
TCTTATTCTGATGGCTATGG+AGG 0.500846 7:+6127094 MsG0780036299.01.T01:CDS
TTGTGATGAGCGTGTTGTTA+CGG 0.501109 7:+6123837 MsG0780036299.01.T01:CDS
ATCAGATTGGGTGTGTGATT+GGG 0.501919 7:+6124849 MsG0780036299.01.T01:CDS
CGTTTACCGTTACCTTTGTC+CGG 0.503615 7:+6123714 MsG0780036299.01.T01:CDS
AAAGGCTCTGATTCAGGTTG+CGG 0.503958 7:+6126003 MsG0780036299.01.T01:CDS
GCGGTCGGTGGTTCAATGGT+GGG 0.509013 7:+6126091 MsG0780036299.01.T01:CDS
TCAATGGTGGGTTCTCATGG+TGG 0.510611 7:+6126103 MsG0780036299.01.T01:CDS
TGCGGTCGGTGGTTCAATGG+TGG 0.511251 7:+6126090 MsG0780036299.01.T01:CDS
AGATTGTCCGACAGATTGTC+TGG 0.513148 7:+6127516 MsG0780036299.01.T01:CDS
CACAGCTGCTTCAATTGTTG+CGG 0.514880 7:-6126548 None:intergenic
TTGTGGCGTCTGATCAGATT+GGG 0.517025 7:+6124837 MsG0780036299.01.T01:CDS
ATGTTTGGTCCCCTAGATAG+AGG 0.517490 7:-6127895 None:intergenic
GATTGTCTGGTGGTGTATCT+CGG 0.518577 7:+6127529 MsG0780036299.01.T01:CDS
TATAATAAATCAAATTAGGC+AGG 0.519067 7:+6126306 MsG0780036299.01.T01:CDS
TAGCAGTTGGACAAACAAAT+CGG 0.520156 7:-6126252 None:intergenic
GCAGGAAGATATGCAAGTAC+TGG 0.523882 7:-6127001 None:intergenic
GGTCCATGTATCCGGGCTCA+AGG 0.524049 7:+6126200 MsG0780036299.01.T01:CDS
AAACCTTGGTGGGTCCCTGC+AGG 0.524068 7:+6127572 MsG0780036299.01.T01:exon
CCAGATGGTTTCAACTATGA+AGG 0.524623 7:+6127037 MsG0780036299.01.T01:CDS
ATCGGCAGCATCATTGGCCG+CGG 0.525073 7:+6123745 MsG0780036299.01.T01:CDS
CATATGCGGCAGCTTGGTCG+AGG 0.527118 7:+6127268 MsG0780036299.01.T01:intron
GGTGGCTATTCTTATTCTGA+TGG 0.527717 7:+6127085 MsG0780036299.01.T01:CDS
ATGGGAATGGCTCCGATTGG+TGG 0.530538 7:+6126136 MsG0780036299.01.T01:CDS
TATCTTCCTGCTTCGCCAGA+AGG 0.531028 7:+6127013 MsG0780036299.01.T01:CDS
CCTCCATAACCACCACCAAT+CGG 0.537459 7:-6126148 None:intergenic
TAACTTCCATAAGCTCCATA+AGG 0.538976 7:-6127295 None:intergenic
GTTTGTCCAACTGCTAACAT+TGG 0.542273 7:+6126259 MsG0780036299.01.T01:CDS
GGCAGCATCATTGGCCGCGG+CGG 0.543522 7:+6123748 MsG0780036299.01.T01:CDS
GGTGTGTGATTGGGAAAGGT+GGG 0.544155 7:+6124858 MsG0780036299.01.T01:CDS
GGATTCTGGGGCAAATATCA+AGG 0.544315 7:+6126327 MsG0780036299.01.T01:CDS
TATCCACGGTCCATGTATCC+GGG 0.544857 7:+6126193 MsG0780036299.01.T01:CDS
ATTGGGTGTGTGATTGGGAA+AGG 0.547162 7:+6124854 MsG0780036299.01.T01:CDS
CCATGAATTTGTCAGTCACT+GGG 0.547663 7:-6127860 None:intergenic
GTTCCTGGGGTGTATGCGGT+CGG 0.548847 7:+6126076 MsG0780036299.01.T01:CDS
TTAGGATTCTTAAGGATGAT+CGG 0.549307 7:+6124921 MsG0780036299.01.T01:CDS
TATCCGGGCTCAAGGGATGA+AGG 0.550864 7:+6126208 MsG0780036299.01.T01:CDS
TTCAACTATGAAGGTAGAGA+TGG 0.552487 7:+6127046 MsG0780036299.01.T01:CDS
GTGAAATGTGTCTCTTGGAG+TGG 0.554448 7:-6123674 None:intergenic
CTGACAAGCGCATCCATAGC+AGG 0.554642 7:-6123916 None:intergenic
GTCTCTTGGAGTGGTTTCGT+CGG 0.557133 7:-6123665 None:intergenic
TGAAGACGTTGATATGGAGA+AGG 0.558240 7:+6123984 MsG0780036299.01.T01:CDS
AATGGTGGGTTCTCATGGTG+GGG 0.558992 7:+6126105 MsG0780036299.01.T01:CDS
GAACCTTCATCCCTTGAGCC+CGG 0.559965 7:-6126211 None:intergenic
GGATGGAGGGGATTTGGTCA+CGG 0.560016 7:+6124805 MsG0780036299.01.T01:CDS
GGTTGCCTTATTGGTAAAGG+AGG 0.560805 7:+6126661 MsG0780036299.01.T01:CDS
TCAAATTAGGCAGGATTCTG+GGG 0.561605 7:+6126315 MsG0780036299.01.T01:CDS
GGAATGGCTCCGATTGGTGG+TGG 0.561692 7:+6126139 MsG0780036299.01.T01:CDS
TGGAAACTATGGAAGTTCAC+AGG 0.562268 7:+6127147 MsG0780036299.01.T01:CDS
GCTTACTTCTGCAGTTCCTG+GGG 0.562545 7:+6126063 MsG0780036299.01.T01:CDS
CATGGTTACTAAAACCTTGG+TGG 0.562818 7:+6127561 MsG0780036299.01.T01:exon
ATTTGTCAGTCACTGGGTAG+AGG 0.566631 7:-6127854 None:intergenic
CGACAAAACAAAGATAGTAC+AGG 0.570158 7:-6128086 None:intergenic
ACGAAGGCGAAGATCCGAAT+CGG 0.572162 7:+6123799 MsG0780036299.01.T01:CDS
CTCTGATGTTATCAGGTGGA+TGG 0.572368 7:+6124788 MsG0780036299.01.T01:intron
GTCCATGTATCCGGGCTCAA+GGG 0.574091 7:+6126201 MsG0780036299.01.T01:CDS
TGCAGTTCCTGGGGTGTATG+CGG 0.574727 7:+6126072 MsG0780036299.01.T01:CDS
ACACCTCCAATGTTAGCAGT+TGG 0.575469 7:-6126265 None:intergenic
CTCTTGTGCAAGTACTTACC+CGG 0.576314 7:+6126927 MsG0780036299.01.T01:CDS
AATAGCCATTTCGGCGAGAG+AGG 0.578458 7:+6126384 MsG0780036299.01.T01:CDS
TGTCCAACTGCTAACATTGG+AGG 0.579765 7:+6126262 MsG0780036299.01.T01:CDS
TCCCCTAGATAGAGGCATCA+AGG 0.580833 7:-6127887 None:intergenic
TACAGGTATACAACTGGCAA+AGG 0.581153 7:-6128069 None:intergenic
CCACCGACCGCATACACCCC+AGG 0.582772 7:-6126079 None:intergenic
CTGGGTAGAGGCGTCAAGGT+GGG 0.583814 7:-6127842 None:intergenic
GTCACTGGGTAGAGGCGTCA+AGG 0.585145 7:-6127846 None:intergenic
GGTCACGGCGAAATTGCTTG+TGG 0.585277 7:+6124820 MsG0780036299.01.T01:CDS
CTCTGATTCAGGTTGCGGCA+CGG 0.585528 7:+6126008 MsG0780036299.01.T01:CDS
GGTGTTATAGGTAAGGGCGG+TGG 0.586093 7:+6126283 MsG0780036299.01.T01:CDS
TGATGTTATCAGGTGGATGG+AGG 0.586758 7:+6124791 MsG0780036299.01.T01:intron
CAATCATTACTGAGATGAGA+AGG 0.587009 7:+6126686 MsG0780036299.01.T01:CDS
CTAGATAGAGGCATCAAGGT+TGG 0.587204 7:-6127883 None:intergenic
AAGGGATGAAGGTTCTCCGA+TGG 0.587530 7:+6126219 MsG0780036299.01.T01:CDS
TGGGGCTCCAATTATGGGAA+TGG 0.589051 7:+6126123 MsG0780036299.01.T01:CDS
ATTGGAGGTGTTATAGGTAA+GGG 0.591478 7:+6126277 MsG0780036299.01.T01:CDS
CGATTGGTGGTGGTTATGGA+GGG 0.591635 7:+6126149 MsG0780036299.01.T01:CDS
GGAAGATATGCAAGTACTGG+TGG 0.592745 7:-6126998 None:intergenic
GTTGATAGTTCGGCAACTGA+AGG 0.592881 7:+6126349 MsG0780036299.01.T01:CDS
GATGTTATCAGGTGGATGGA+GGG 0.594519 7:+6124792 MsG0780036299.01.T01:intron
ATGGTTACTAAAACCTTGGT+GGG 0.595179 7:+6127562 MsG0780036299.01.T01:exon
AGCAAATGTTGAGTACGTGA+AGG 0.595406 7:-6126043 None:intergenic
CAGAATATAAGGAGTGAGAC+CGG 0.595890 7:+6124890 MsG0780036299.01.T01:CDS
GGTAGAGATGGAAGACGACA+TGG 0.599304 7:+6127058 MsG0780036299.01.T01:CDS
AGCTTATGGAAGTTATGCTA+CGG 0.600781 7:+6127303 MsG0780036299.01.T01:CDS
GCTTGTCAGGATTCATCAGA+AGG 0.601873 7:+6123930 MsG0780036299.01.T01:CDS
TGAAGATGATGAAATGGTGC+AGG 0.602115 7:+6126765 MsG0780036299.01.T01:CDS
GATCCTCCTTAGATAGGATG+CGG 0.604218 7:-6126726 None:intergenic
ATGCGGCAGCTTGGTCGAGG+TGG 0.604698 7:+6127271 MsG0780036299.01.T01:intron
CCTGGGGTGTATGCGGTCGG+TGG 0.606038 7:+6126079 MsG0780036299.01.T01:CDS
ATTATGGGAATGGCTCCGAT+TGG 0.609678 7:+6126133 MsG0780036299.01.T01:CDS
AAGAATCCTAATCTGTGCAC+CGG 0.611412 7:-6124909 None:intergenic
CATCCGCATCCTATCTAAGG+AGG 0.616844 7:+6126723 MsG0780036299.01.T01:CDS
GATGGAAGACGACATGGACG+TGG 0.622802 7:+6127064 MsG0780036299.01.T01:CDS
TGCGAACCGGACAAAGGTAA+CGG 0.624302 7:-6123720 None:intergenic
GCTGGTCAAAGAACATCCTA+CGG 0.624883 7:+6123571 MsG0780036299.01.T01:CDS
TATCTAGGGGACCAAACATG+TGG 0.625382 7:+6127899 MsG0780036299.01.T01:three_prime_UTR
GCAAATGTTGAGTACGTGAA+GGG 0.628954 7:-6126042 None:intergenic
GCTTCGCCAGAAGGACCAGA+TGG 0.629484 7:+6127022 MsG0780036299.01.T01:CDS
ATGTTATCAGGTGGATGGAG+GGG 0.631700 7:+6124793 MsG0780036299.01.T01:intron
GTGTGAACGTTTGTTGCCGT+AGG 0.637858 7:-6123587 None:intergenic
TCATCAGAAGGTGATTGCTG+AGG 0.638299 7:+6123942 MsG0780036299.01.T01:CDS
GCAAGTAACTATGAACTACC+AGG 0.638924 7:-6128115 None:intergenic
ATTGCTGAGGATTTGCGTGG+TGG 0.640532 7:+6123955 MsG0780036299.01.T01:CDS
GCAGTGAGTTTGTCAAACCA+TGG 0.642376 7:-6127820 None:intergenic
GAAGCTAAAATCTACCTGCA+GGG 0.642778 7:-6127586 None:intergenic
ACAACACGCTCATCACAACC+AGG 0.651674 7:-6123832 None:intergenic
GGAAGACGACATGGACGTGG+TGG 0.651683 7:+6127067 MsG0780036299.01.T01:CDS
TTTAGATCTAAAACACCATG+TGG 0.652874 7:+6128039 MsG0780036299.01.T01:three_prime_UTR
ACCTTGATGCCTCTATCTAG+GGG 0.653496 7:+6127886 MsG0780036299.01.T01:three_prime_UTR
TCAGAATTCAGCGCACAAAG+TGG 0.655152 7:-6124947 None:intergenic
CTACCTGCAGGGACCCACCA+AGG 0.655648 7:-6127575 None:intergenic
CTGGAAGACGAGATGAACCA+TGG 0.661796 7:+6127803 MsG0780036299.01.T01:three_prime_UTR
GAAGTAAGGTAAAATGGACA+TGG 0.661826 7:-6127938 None:intergenic
ACAACTCCGTCTTGATACGA+AGG 0.662897 7:+6123783 MsG0780036299.01.T01:CDS
AATCGGACTGAAAACTCCAT+CGG 0.665768 7:-6126235 None:intergenic
ACAATTCTCACAATTCACAA+TGG 0.665812 7:+6123549 MsG0780036299.01.T01:exon
ACTGGGTAGAGGCGTCAAGG+TGG 0.670676 7:-6127843 None:intergenic
TACACCACCAGACAATCTGT+CGG 0.671440 7:-6127523 None:intergenic
GTGATTGCTGAGGATTTGCG+TGG 0.679408 7:+6123952 MsG0780036299.01.T01:CDS
GTTTCACGATCTCGCCGCCG+CGG 0.681169 7:-6123762 None:intergenic
TCTTCGCCTTCGTATCAAGA+CGG 0.682357 7:-6123789 None:intergenic
ATGGAAGTTATGCTACGGAA+CGG 0.690137 7:+6127308 MsG0780036299.01.T01:CDS
GGCAAAGGAACATATCCACA+TGG 0.696425 7:-6128054 None:intergenic
TCAACTTTCTCACTGCACCG+GGG 0.700169 7:-6126580 None:intergenic
GGAGGTGTTATAGGTAAGGG+CGG 0.712082 7:+6126280 MsG0780036299.01.T01:CDS
GTATCTCGGAGGAGAAACCA+TGG 0.714795 7:+6127543 MsG0780036299.01.T01:CDS
TTGTCCGACAGATTGTCTGG+TGG 0.724794 7:+6127519 MsG0780036299.01.T01:CDS
GTGATGTTGGAGACTATCCA+CGG 0.725781 7:+6126179 MsG0780036299.01.T01:CDS
TGTCTGGTGGTGTATCTCGG+AGG 0.726292 7:+6127532 MsG0780036299.01.T01:CDS
GAGCCCGGATACATGGACCG+TGG 0.743404 7:-6126196 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAAAAAAAAATTAATTTT+TGG + Chr7:6124019-6124038 MsG0780036299.01.T01:intron 0.0%
!! AAAGAATATGATATAATATT+TGG + Chr7:6124267-6124286 MsG0780036299.01.T01:intron 10.0%
!! TTTGAATAATATAATGATAT+TGG + Chr7:6128155-6128174 MsG0780036299.01.T01:three_prime_UTR 10.0%
!! TTTAATTATTGTTTCATATG+CGG + Chr7:6127254-6127273 MsG0780036299.01.T01:intron 15.0%
!!! CAAAAAAAAAAACCATTTTT+TGG + Chr7:6124580-6124599 MsG0780036299.01.T01:intron 15.0%
!!! TTTTTTTTTGCTTATAATAG+TGG - Chr7:6124570-6124589 None:intergenic 15.0%
!! AAAATATCAGAAAGAGATTA+GGG - Chr7:6124763-6124782 None:intergenic 20.0%
!! AATAAAAAAAGCAGTCATTA+AGG - Chr7:6128010-6128029 None:intergenic 20.0%
!! ATAAACTACAAAATAAATCG+AGG - Chr7:6127611-6127630 None:intergenic 20.0%
!! GTGGTATAATAAATCAAATT+AGG + Chr7:6126302-6126321 MsG0780036299.01.T01:CDS 20.0%
!! TAAAATCCTGGAAAAATTAA+TGG - Chr7:6127186-6127205 None:intergenic 20.0%
!! TATAATAAATCAAATTAGGC+AGG + Chr7:6126306-6126325 MsG0780036299.01.T01:CDS 20.0%
!! TATTCAATGAATCCAAAAAA+TGG - Chr7:6124595-6124614 None:intergenic 20.0%
!! TTTATTATAATAGTGACCAA+AGG + Chr7:6124684-6124703 MsG0780036299.01.T01:intron 20.0%
!!! AATCAATTTGTTTTGTCATA+TGG + Chr7:6126440-6126459 MsG0780036299.01.T01:intron 20.0%
!!! AATCTAATGTTTTCAAATAG+CGG + Chr7:6125314-6125333 MsG0780036299.01.T01:intron 20.0%
!!! ATCAATTTGTTTTGTCATAT+GGG + Chr7:6126441-6126460 MsG0780036299.01.T01:intron 20.0%
!!! ATGTATCTAAAGCTTATTAT+AGG - Chr7:6124632-6124651 None:intergenic 20.0%
!!! ATTAAGTTGTTTATCTAAAG+TGG - Chr7:6125121-6125140 None:intergenic 20.0%
!!! TTAAGGAAAGCTATTTTTAT+AGG - Chr7:6127993-6128012 None:intergenic 20.0%
! AAAAACTAATATTACGACTG+AGG - Chr7:6124495-6124514 None:intergenic 25.0%
! AAATAGTAGTTCAGAATCAT+CGG - Chr7:6126853-6126872 None:intergenic 25.0%
! AAGAAAGCAAAAAACTAAGT+CGG + Chr7:6123477-6123496 MsG0780036299.01.T01:five_prime_UTR 25.0%
! ACATACAACAATTTCTCATT+CGG - Chr7:6125931-6125950 None:intergenic 25.0%
! ACGTTAGAACGTAAAATAAA+TGG - Chr7:6127357-6127376 None:intergenic 25.0%
! AGAACGTAAAATAAATGGTT+TGG - Chr7:6127352-6127371 None:intergenic 25.0%
! ATAGCAAAGTAGAATTTGAA+CGG + Chr7:6125474-6125493 MsG0780036299.01.T01:intron 25.0%
! ATTATAGTTTCTCAATGTCT+GGG + Chr7:6124048-6124067 MsG0780036299.01.T01:intron 25.0%
! CAAAATATCAGAAAGAGATT+AGG - Chr7:6124764-6124783 None:intergenic 25.0%
! GAAATAACTTATAGCTTACA+TGG - Chr7:6125246-6125265 None:intergenic 25.0%
! GTGTAATTCTTTAAGCTATT+CGG + Chr7:6124184-6124203 MsG0780036299.01.T01:intron 25.0%
! TAAATTACTAGTTACACCTT+TGG - Chr7:6124703-6124722 None:intergenic 25.0%
! TAGATAACAAAAGTCAGTAT+TGG - Chr7:6127479-6127498 None:intergenic 25.0%
! TATTATAGTTTCTCAATGTC+TGG + Chr7:6124047-6124066 MsG0780036299.01.T01:intron 25.0%
! TTTATTGAGATTGTTGAATC+TGG + Chr7:6124512-6124531 MsG0780036299.01.T01:intron 25.0%
! TTTGTGAATTTGTGAGTTTA+GGG - Chr7:6123528-6123547 None:intergenic 25.0%
!! TTACAACCATTAATTTTTCC+AGG + Chr7:6127177-6127196 MsG0780036299.01.T01:intron 25.0%
!! TTCTCAATGCTTTTAGATTT+CGG + Chr7:6126880-6126899 MsG0780036299.01.T01:intron 25.0%
!! TTGTGATGAACCTTTTTAAT+TGG + Chr7:6124995-6125014 MsG0780036299.01.T01:intron 25.0%
!!! AAATATCAAGGTTGATAGTT+CGG + Chr7:6126339-6126358 MsG0780036299.01.T01:CDS 25.0%
!!! AAGCTATTTTTATAGGTTCT+TGG - Chr7:6127986-6128005 None:intergenic 25.0%
!!! AATGACTGCTTTTTTTATTC+CGG + Chr7:6128011-6128030 MsG0780036299.01.T01:three_prime_UTR 25.0%
!!! AGCTATTTTTATAGGTTCTT+GGG - Chr7:6127985-6128004 None:intergenic 25.0%
!!! AGTTTTTGAGTTATGCTATT+AGG + Chr7:6124135-6124154 MsG0780036299.01.T01:intron 25.0%
!!! TGAATGGTTTTAAGTAACAT+AGG - Chr7:6127644-6127663 None:intergenic 25.0%
!!! TGTGATGAACCTTTTTAATT+GGG + Chr7:6124996-6125015 MsG0780036299.01.T01:intron 25.0%
AACATGCATAGAGAAGAATA+TGG - Chr7:6127406-6127425 None:intergenic 30.0%
AATAGTAGTTCAGAATCATC+GGG - Chr7:6126852-6126871 None:intergenic 30.0%
AATCTACAGCCCAATTAAAA+AGG - Chr7:6125008-6125027 None:intergenic 30.0%
AATGTTGTAAATCCAGATCA+CGG - Chr7:6125359-6125378 None:intergenic 30.0%
ACAATTCTCACAATTCACAA+TGG + Chr7:6123549-6123568 MsG0780036299.01.T01:exon 30.0%
ACATGCATAGAGAAGAATAT+GGG - Chr7:6127405-6127424 None:intergenic 30.0%
ACCAGAATCTTCAAAATCAT+TGG - Chr7:6123884-6123903 None:intergenic 30.0%
ATAAGAAATGATTGAATGGC+TGG + Chr7:6126465-6126484 MsG0780036299.01.T01:intron 30.0%
ATGAGCATCAAAATTCTACA+TGG - Chr7:6127708-6127727 None:intergenic 30.0%
CTACTTATGATTCACAAACA+CGG - Chr7:6124390-6124409 None:intergenic 30.0%
GTATTAAATAGCATCCACAT+GGG - Chr7:6125505-6125524 None:intergenic 30.0%
GTTTGTGAATTTGTGAGTTT+AGG - Chr7:6123529-6123548 None:intergenic 30.0%
TACGAAAACAACTTACTGTT+CGG - Chr7:6125682-6125701 None:intergenic 30.0%
TACTTATGATTCACAAACAC+GGG - Chr7:6124389-6124408 None:intergenic 30.0%
TATAGAGCCTCTATTTGAAT+CGG - Chr7:6125764-6125783 None:intergenic 30.0%
TATTCTTATTCTGATGGCTA+TGG + Chr7:6127091-6127110 MsG0780036299.01.T01:CDS 30.0%
TCTGTTAATGCTAATGTGAA+TGG - Chr7:6127660-6127679 None:intergenic 30.0%
TTAGGATTCTTAAGGATGAT+CGG + Chr7:6124921-6124940 MsG0780036299.01.T01:CDS 30.0%
! AAATGAACCGATTCAAATAG+AGG + Chr7:6125754-6125773 MsG0780036299.01.T01:intron 30.0%
! CATCTTCAGTTGCAATTTTA+GGG - Chr7:6126753-6126772 None:intergenic 30.0%
! GAGAGCAAATCTTTTTGATA+AGG + Chr7:6126952-6126971 MsG0780036299.01.T01:CDS 30.0%
! TCATCTTCAGTTGCAATTTT+AGG - Chr7:6126754-6126773 None:intergenic 30.0%
! TCTCAATGCTTTTAGATTTC+GGG + Chr7:6126881-6126900 MsG0780036299.01.T01:intron 30.0%
! TTTAGATCTAAAACACCATG+TGG + Chr7:6128039-6128058 MsG0780036299.01.T01:three_prime_UTR 30.0%
!! GTTTTAGATCTAAAGACAAC+CGG - Chr7:6128033-6128052 None:intergenic 30.0%
!! TCCAATGATTTTGAAGATTC+TGG + Chr7:6123880-6123899 MsG0780036299.01.T01:CDS 30.0%
!! TTTTTCCAGGATTTTAAGTG+CGG + Chr7:6127190-6127209 MsG0780036299.01.T01:intron 30.0%
!!! AGATTGACAACATTTTTTCC+TGG + Chr7:6125598-6125617 MsG0780036299.01.T01:intron 30.0%
!!! TGATGTCTTTTTTGGGAAAT+CGG + Chr7:6126815-6126834 MsG0780036299.01.T01:intron 30.0%
!!! TGGTTTTAAGTAACATAGGA+AGG - Chr7:6127640-6127659 None:intergenic 30.0%
AACCATGGTTACTAAAACCT+TGG + Chr7:6127558-6127577 MsG0780036299.01.T01:exon 35.0%
AATCAAATTAGGCAGGATTC+TGG + Chr7:6126313-6126332 MsG0780036299.01.T01:CDS 35.0%
ACGAAAACAACTTACTGTTC+GGG - Chr7:6125681-6125700 None:intergenic 35.0%
AGATAGTACAGGTATACAAC+TGG - Chr7:6128078-6128097 None:intergenic 35.0%
AGCTTATGGAAGTTATGCTA+CGG + Chr7:6127303-6127322 MsG0780036299.01.T01:CDS 35.0%
ATATTACGACTGAGGATTCA+CGG - Chr7:6124487-6124506 None:intergenic 35.0%
ATCAAATTAGGCAGGATTCT+GGG + Chr7:6126314-6126333 MsG0780036299.01.T01:CDS 35.0%
ATGGTTACTAAAACCTTGGT+GGG + Chr7:6127562-6127581 MsG0780036299.01.T01:exon 35.0%
ATTGTTGAATCTGGTGTTTG+TGG + Chr7:6124521-6124540 MsG0780036299.01.T01:intron 35.0%
CAAAATTCTACATGGTACAC+TGG - Chr7:6127700-6127719 None:intergenic 35.0%
CAATCATTACTGAGATGAGA+AGG + Chr7:6126686-6126705 MsG0780036299.01.T01:CDS 35.0%
CGACAAAACAAAGATAGTAC+AGG - Chr7:6128089-6128108 None:intergenic 35.0%
CGTATTAAATAGCATCCACA+TGG - Chr7:6125506-6125525 None:intergenic 35.0%
CTTCATTTGTGAAACTGTTC+AGG - Chr7:6125711-6125730 None:intergenic 35.0%
GAAGTAAGGTAAAATGGACA+TGG - Chr7:6127941-6127960 None:intergenic 35.0%
GAGAAAGTTGAAAGAGATTC+TGG + Chr7:6126592-6126611 MsG0780036299.01.T01:CDS 35.0%
GCTTAGGAAGTAAGGTAAAA+TGG - Chr7:6127947-6127966 None:intergenic 35.0%
GGATTATTCAGTGTCGTATT+TGG + Chr7:6124156-6124175 MsG0780036299.01.T01:intron 35.0%
GGCAGATTGTTCAGAATATA+AGG + Chr7:6124879-6124898 MsG0780036299.01.T01:CDS 35.0%
GGGCATAAGAAATGATTGAA+TGG + Chr7:6126461-6126480 MsG0780036299.01.T01:intron 35.0%
GTTATGTGAAATGTGTCTCT+TGG - Chr7:6123682-6123701 None:intergenic 35.0%
TAAATCCAGATCACGGAAAA+TGG - Chr7:6125352-6125371 None:intergenic 35.0%
TAACTTCCATAAGCTCCATA+AGG - Chr7:6127298-6127317 None:intergenic 35.0%
TAGCAGTTGGACAAACAAAT+CGG - Chr7:6126255-6126274 None:intergenic 35.0%
TCCTGAATCAATGTTGTCAA+TGG + Chr7:6125274-6125293 MsG0780036299.01.T01:intron 35.0%
TGAAGATGAAGACGTTGATA+TGG + Chr7:6123978-6123997 MsG0780036299.01.T01:CDS 35.0%
TGAATCAATGTTGTCAATGG+CGG + Chr7:6125277-6125296 MsG0780036299.01.T01:intron 35.0%
TGACTGCTTAATAGCCATTT+CGG + Chr7:6126375-6126394 MsG0780036299.01.T01:CDS 35.0%
TGCAACTGAAGATGATGAAA+TGG + Chr7:6126759-6126778 MsG0780036299.01.T01:CDS 35.0%
TGCACAGATTAGGATTCTTA+AGG + Chr7:6124913-6124932 MsG0780036299.01.T01:CDS 35.0%
TGTGTTTATGCAGTTCTTTG+AGG + Chr7:6126516-6126535 MsG0780036299.01.T01:intron 35.0%
TTCAACTATGAAGGTAGAGA+TGG + Chr7:6127046-6127065 MsG0780036299.01.T01:CDS 35.0%
TTCAATAGTCTCCACATGTT+TGG - Chr7:6127913-6127932 None:intergenic 35.0%
TTGATCCTCCTTTACCAATA+AGG - Chr7:6126669-6126688 None:intergenic 35.0%
TTGTGATCTCTGATGTTATC+AGG + Chr7:6124781-6124800 MsG0780036299.01.T01:intron 35.0%
! ACATTTTCCTGGAGAGTTTA+TGG + Chr7:6125374-6125393 MsG0780036299.01.T01:intron 35.0%
! ATTGGTTGCCTTATTGGTAA+AGG + Chr7:6126658-6126677 MsG0780036299.01.T01:CDS 35.0%
! CTCAATGCTTTTAGATTTCG+GGG + Chr7:6126882-6126901 MsG0780036299.01.T01:intron 35.0%
! CTGGATTTACAACATTTTCC+TGG + Chr7:6125363-6125382 MsG0780036299.01.T01:intron 35.0%
! TCAATGCTTTTAGATTTCGG+GGG + Chr7:6126883-6126902 MsG0780036299.01.T01:intron 35.0%
! TGAGATTGCTGTTGTGAAAA+AGG + Chr7:6125985-6126004 MsG0780036299.01.T01:CDS 35.0%
!! ATTGGAGGTGTTATAGGTAA+GGG + Chr7:6126277-6126296 MsG0780036299.01.T01:CDS 35.0%
!!! CATTTTTTCCTGGAGAGTTA+TGG + Chr7:6125608-6125627 MsG0780036299.01.T01:intron 35.0%
!!! GCTTGAGTGATGTCTTTTTT+GGG + Chr7:6126808-6126827 MsG0780036299.01.T01:intron 35.0%
!!! GTTGTTTTGATAAGTTGTCC+TGG + Chr7:6125427-6125446 MsG0780036299.01.T01:intron 35.0%
!!! TGCTTGAGTGATGTCTTTTT+TGG + Chr7:6126807-6126826 MsG0780036299.01.T01:intron 35.0%
!!! TTTGTTTTGTCGTGTTTTCC+TGG + Chr7:6128097-6128116 MsG0780036299.01.T01:three_prime_UTR 35.0%
AACCTTGATGCCTCTATCTA+GGG + Chr7:6127885-6127904 MsG0780036299.01.T01:three_prime_UTR 40.0%
AAGAATCCTAATCTGTGCAC+CGG - Chr7:6124912-6124931 None:intergenic 40.0%
AATCGGACTGAAAACTCCAT+CGG - Chr7:6126238-6126257 None:intergenic 40.0%
ACATAACTCAGCTGTTTGGA+TGG - Chr7:6127758-6127777 None:intergenic 40.0%
ACTTACTTCCATAACTCTCC+AGG - Chr7:6125619-6125638 None:intergenic 40.0%
AGCAAATGTTGAGTACGTGA+AGG - Chr7:6126046-6126065 None:intergenic 40.0%
ATAACTCAGCTGTTTGGATG+GGG - Chr7:6127756-6127775 None:intergenic 40.0%
ATCAGATTGGGTGTGTGATT+GGG + Chr7:6124849-6124868 MsG0780036299.01.T01:CDS 40.0%
ATCAGTGTTTGTGTCGTGTT+TGG + Chr7:6124452-6124471 MsG0780036299.01.T01:intron 40.0%
ATGGAAGTTATGCTACGGAA+CGG + Chr7:6127308-6127327 MsG0780036299.01.T01:CDS 40.0%
CAGAATATAAGGAGTGAGAC+CGG + Chr7:6124890-6124909 MsG0780036299.01.T01:CDS 40.0%
CATAACTCAGCTGTTTGGAT+GGG - Chr7:6127757-6127776 None:intergenic 40.0%
CATGGTTACTAAAACCTTGG+TGG + Chr7:6127561-6127580 MsG0780036299.01.T01:exon 40.0%
CCAGATGGTTTCAACTATGA+AGG + Chr7:6127037-6127056 MsG0780036299.01.T01:CDS 40.0%
CCATGAATTTGTCAGTCACT+GGG - Chr7:6127863-6127882 None:intergenic 40.0%
CCTTCATAGTTGAAACCATC+TGG - Chr7:6127040-6127059 None:intergenic 40.0%
CGGTAATTCATACCACACTT+CGG + Chr7:6124544-6124563 MsG0780036299.01.T01:intron 40.0%
CTTACTTCCATAAACTCTCC+AGG - Chr7:6125384-6125403 None:intergenic 40.0%
CTTCACATAACTCAGCTGTT+TGG - Chr7:6127762-6127781 None:intergenic 40.0%
GAAGCTAAAATCTACCTGCA+GGG - Chr7:6127589-6127608 None:intergenic 40.0%
GCAAATGTTGAGTACGTGAA+GGG - Chr7:6126045-6126064 None:intergenic 40.0%
GCAAGTAACTATGAACTACC+AGG - Chr7:6128118-6128137 None:intergenic 40.0%
GGACAATCTATCAGACAATC+TGG - Chr7:6127505-6127524 None:intergenic 40.0%
GGATTATTGTCTGTGTGATG+AGG + Chr7:6124205-6124224 MsG0780036299.01.T01:intron 40.0%
GGTGGCTATTCTTATTCTGA+TGG + Chr7:6127085-6127104 MsG0780036299.01.T01:CDS 40.0%
GTATTCTCTCTTTCACTAGC+CGG + Chr7:6126614-6126633 MsG0780036299.01.T01:CDS 40.0%
GTTCAACCACTCATGGAAAA+TGG - Chr7:6125560-6125579 None:intergenic 40.0%
GTTGTCAATCTCACCCAAAA+TGG - Chr7:6125589-6125608 None:intergenic 40.0%
GTTTGTCCAACTGCTAACAT+TGG + Chr7:6126259-6126278 MsG0780036299.01.T01:CDS 40.0%
TAACATCCGCATCCTATCTA+AGG + Chr7:6126720-6126739 MsG0780036299.01.T01:CDS 40.0%
TACAGGTATACAACTGGCAA+AGG - Chr7:6128072-6128091 None:intergenic 40.0%
TCAAATTAGGCAGGATTCTG+GGG + Chr7:6126315-6126334 MsG0780036299.01.T01:CDS 40.0%
TCGGATGCAACAATAACAGA+TGG - Chr7:6125912-6125931 None:intergenic 40.0%
TCTCGAATTGGTTGCCTTAT+TGG + Chr7:6126652-6126671 MsG0780036299.01.T01:CDS 40.0%
TCTTATTCTGATGGCTATGG+AGG + Chr7:6127094-6127113 MsG0780036299.01.T01:CDS 40.0%
TGAAGACGTTGATATGGAGA+AGG + Chr7:6123984-6124003 MsG0780036299.01.T01:CDS 40.0%
TGAAGATGATGAAATGGTGC+AGG + Chr7:6126765-6126784 MsG0780036299.01.T01:CDS 40.0%
TGAGTTTATGTGTCCTGCTA+TGG + Chr7:6123903-6123922 MsG0780036299.01.T01:CDS 40.0%
TGATCTCTGATGTTATCAGG+TGG + Chr7:6124784-6124803 MsG0780036299.01.T01:intron 40.0%
TGATGTTGATATGTCGATCG+TGG + Chr7:6124232-6124251 MsG0780036299.01.T01:intron 40.0%
TGGAAACTATGGAAGTTCAC+AGG + Chr7:6127147-6127166 MsG0780036299.01.T01:CDS 40.0%
TTATAATAGTGGCCGAAGTG+TGG - Chr7:6124559-6124578 None:intergenic 40.0%
TTCATCTCGTCTTCCAGTTT+AGG - Chr7:6127800-6127819 None:intergenic 40.0%
TTCTCACAATTCACAATGGC+TGG + Chr7:6123553-6123572 MsG0780036299.01.T01:exon 40.0%
TTTCAACTTTCTCACTGCAC+CGG - Chr7:6126585-6126604 None:intergenic 40.0%
! AAAAAGATTTGCTCTCAGCC+GGG - Chr7:6126948-6126967 None:intergenic 40.0%
! AAACCACCATTTTCCATGAG+TGG + Chr7:6125551-6125570 MsG0780036299.01.T01:intron 40.0%
! CAAAAAGATTTGCTCTCAGC+CGG - Chr7:6126949-6126968 None:intergenic 40.0%
! GAATTCTGATGAGCTTGTTC+AGG + Chr7:6124961-6124980 MsG0780036299.01.T01:CDS 40.0%
! TGTGAAAAAGGCTCTGATTC+AGG + Chr7:6125997-6126016 MsG0780036299.01.T01:CDS 40.0%
! TTGTGATGAGCGTGTTGTTA+CGG + Chr7:6123837-6123856 MsG0780036299.01.T01:CDS 40.0%
!! CACCAAGGTTTTAGTAACCA+TGG - Chr7:6127563-6127582 None:intergenic 40.0%
!! CATTGGAGGTGTTATAGGTA+AGG + Chr7:6126276-6126295 MsG0780036299.01.T01:CDS 40.0%
!! GCCATTGACAACATTGATTC+AGG - Chr7:6125278-6125297 None:intergenic 40.0%
!! GCTAACATTGGAGGTGTTAT+AGG + Chr7:6126271-6126290 MsG0780036299.01.T01:CDS 40.0%
!! GTTGAACAAACCGCCATTTT+GGG + Chr7:6125573-6125592 MsG0780036299.01.T01:intron 40.0%
!! TACGAAGTGTTGTCAAACAG+TGG + Chr7:6125522-6125541 MsG0780036299.01.T01:intron 40.0%
!! TGAATCAGTGCTGACGTATT+TGG + Chr7:6124361-6124380 MsG0780036299.01.T01:intron 40.0%
ACAACTCCGTCTTGATACGA+AGG + Chr7:6123783-6123802 MsG0780036299.01.T01:CDS 45.0%
ACACCTCCAATGTTAGCAGT+TGG - Chr7:6126268-6126287 None:intergenic 45.0%
ACCTTGATGCCTCTATCTAG+GGG + Chr7:6127886-6127905 MsG0780036299.01.T01:three_prime_UTR 45.0%
AGATTGTCCGACAGATTGTC+TGG + Chr7:6127516-6127535 MsG0780036299.01.T01:CDS 45.0%
AGTTTAGGCAGTAGGCTTCA+GGG - Chr7:6127785-6127804 None:intergenic 45.0%
ATCGGAGCCATTCCCATAAT+TGG - Chr7:6126133-6126152 None:intergenic 45.0%
ATGATGAAATGGTGCAGGTG+AGG + Chr7:6126770-6126789 MsG0780036299.01.T01:intron 45.0%
ATGTTATCAGGTGGATGGAG+GGG + Chr7:6124793-6124812 MsG0780036299.01.T01:intron 45.0%
ATGTTTGGTATCCGTGTCTG+TGG + Chr7:6124073-6124092 MsG0780036299.01.T01:intron 45.0%
ATGTTTGGTCCCCTAGATAG+AGG - Chr7:6127898-6127917 None:intergenic 45.0%
ATTATGGGAATGGCTCCGAT+TGG + Chr7:6126133-6126152 MsG0780036299.01.T01:CDS 45.0%
ATTGGGTGTGTGATTGGGAA+AGG + Chr7:6124854-6124873 MsG0780036299.01.T01:CDS 45.0%
ATTTGTCAGTCACTGGGTAG+AGG - Chr7:6127857-6127876 None:intergenic 45.0%
CAACCACTCATGGAAAATGG+TGG - Chr7:6125557-6125576 None:intergenic 45.0%
CAACCTTGATGCCTCTATCT+AGG + Chr7:6127884-6127903 MsG0780036299.01.T01:three_prime_UTR 45.0%
CACAGCTGCTTCAATTGTTG+CGG - Chr7:6126551-6126570 None:intergenic 45.0%
CCCAGTGACTGACAAATTCA+TGG + Chr7:6127860-6127879 MsG0780036299.01.T01:three_prime_UTR 45.0%
CGTTTACCGTTACCTTTGTC+CGG + Chr7:6123714-6123733 MsG0780036299.01.T01:CDS 45.0%
CTCAATGTCTGGGTCATGTT+TGG + Chr7:6124058-6124077 MsG0780036299.01.T01:intron 45.0%
CTCATCCGCACTTAAAATCC+TGG - Chr7:6127198-6127217 None:intergenic 45.0%
CTCTGATGTTATCAGGTGGA+TGG + Chr7:6124788-6124807 MsG0780036299.01.T01:intron 45.0%
CTCTTGTGCAAGTACTTACC+CGG + Chr7:6126927-6126946 MsG0780036299.01.T01:CDS 45.0%
GATCAGATTGGGTGTGTGAT+TGG + Chr7:6124848-6124867 MsG0780036299.01.T01:CDS 45.0%
GATCCTCCTTAGATAGGATG+CGG - Chr7:6126729-6126748 None:intergenic 45.0%
GATGTTATCAGGTGGATGGA+GGG + Chr7:6124792-6124811 MsG0780036299.01.T01:intron 45.0%
GCAGGAAGATATGCAAGTAC+TGG - Chr7:6127004-6127023 None:intergenic 45.0%
GCAGTGAGTTTGTCAAACCA+TGG - Chr7:6127823-6127842 None:intergenic 45.0%
GCCATGAATTTGTCAGTCAC+TGG - Chr7:6127864-6127883 None:intergenic 45.0%
GCTGGTCAAAGAACATCCTA+CGG + Chr7:6123571-6123590 MsG0780036299.01.T01:CDS 45.0%
GCTTGTCAGGATTCATCAGA+AGG + Chr7:6123930-6123949 MsG0780036299.01.T01:CDS 45.0%
GGAAGCTAAAATCTACCTGC+AGG - Chr7:6127590-6127609 None:intergenic 45.0%
GGCAAAGGAACATATCCACA+TGG - Chr7:6128057-6128076 None:intergenic 45.0%
GTCAATCTCACCCAAAATGG+CGG - Chr7:6125586-6125605 None:intergenic 45.0%
GTGAAATGTGTCTCTTGGAG+TGG - Chr7:6123677-6123696 None:intergenic 45.0%
GTGATGTTGGAGACTATCCA+CGG + Chr7:6126179-6126198 MsG0780036299.01.T01:CDS 45.0%
GTTCGCAAGCTTAGGAAGTA+AGG - Chr7:6127955-6127974 None:intergenic 45.0%
GTTGAATCTGGTGTTTGTGG+CGG + Chr7:6124524-6124543 MsG0780036299.01.T01:intron 45.0%
TACACCACCAGACAATCTGT+CGG - Chr7:6127526-6127545 None:intergenic 45.0%
TAGGGAGATCCTCCTTAGAT+AGG - Chr7:6126735-6126754 None:intergenic 45.0%
TATCTAGGGGACCAAACATG+TGG + Chr7:6127899-6127918 MsG0780036299.01.T01:three_prime_UTR 45.0%
TCAGAATTCAGCGCACAAAG+TGG - Chr7:6124950-6124969 None:intergenic 45.0%
TCATCAGAAGGTGATTGCTG+AGG + Chr7:6123942-6123961 MsG0780036299.01.T01:CDS 45.0%
TCTTCGCCTTCGTATCAAGA+CGG - Chr7:6123792-6123811 None:intergenic 45.0%
TGATGTTATCAGGTGGATGG+AGG + Chr7:6124791-6124810 MsG0780036299.01.T01:intron 45.0%
TGCTTACTTCTGCAGTTCCT+GGG + Chr7:6126062-6126081 MsG0780036299.01.T01:CDS 45.0%
TGTCCAACTGCTAACATTGG+AGG + Chr7:6126262-6126281 MsG0780036299.01.T01:CDS 45.0%
TTCAACTTTCTCACTGCACC+GGG - Chr7:6126584-6126603 None:intergenic 45.0%
TTCTACATGGTACACTGGTC+AGG - Chr7:6127695-6127714 None:intergenic 45.0%
TTGAAACCATCTGGTCCTTC+TGG - Chr7:6127031-6127050 None:intergenic 45.0%
TTGAAGCACGAACACAGACA+CGG - Chr7:6124107-6124126 None:intergenic 45.0%
TTGCTTACTTCTGCAGTTCC+TGG + Chr7:6126061-6126080 MsG0780036299.01.T01:CDS 45.0%
TTGTGGCGTCTGATCAGATT+GGG + Chr7:6124837-6124856 MsG0780036299.01.T01:CDS 45.0%
TTGTTTCATATGCGGCAGCT+TGG + Chr7:6127262-6127281 MsG0780036299.01.T01:intron 45.0%
! AGTGATTTTGCATCTGGCGA+CGG + Chr7:6127121-6127140 MsG0780036299.01.T01:CDS 45.0%
! CAGGAACAGTTTCACCGATT+CGG - Chr7:6123816-6123835 None:intergenic 45.0%
! CGGACAAAGGTAACGGTAAA+CGG - Chr7:6123716-6123735 None:intergenic 45.0%
! CTTTGTCCGGTTCGCAAAAT+CGG + Chr7:6123727-6123746 MsG0780036299.01.T01:CDS 45.0%
! GATTGTCTGGTGGTGTATCT+CGG + Chr7:6127529-6127548 MsG0780036299.01.T01:CDS 45.0%
! GGAGGGTATAAAGGTGATGT+TGG + Chr7:6126166-6126185 MsG0780036299.01.T01:CDS 45.0%
! GGCTCAAGTGATTTTGCATC+TGG + Chr7:6127115-6127134 MsG0780036299.01.T01:CDS 45.0%
! GGTGGTTATGGAGGGTATAA+AGG + Chr7:6126157-6126176 MsG0780036299.01.T01:CDS 45.0%
! GGTTGAACAAACCGCCATTT+TGG + Chr7:6125572-6125591 MsG0780036299.01.T01:intron 45.0%
! GGTTGCCTTATTGGTAAAGG+AGG + Chr7:6126661-6126680 MsG0780036299.01.T01:CDS 45.0%
!! AAAGGCTCTGATTCAGGTTG+CGG + Chr7:6126003-6126022 MsG0780036299.01.T01:CDS 45.0%
!! CTAGATAGAGGCATCAAGGT+TGG - Chr7:6127886-6127905 None:intergenic 45.0%
!! GGAAGATATGCAAGTACTGG+TGG - Chr7:6127001-6127020 None:intergenic 45.0%
!! GGATTCTGGGGCAAATATCA+AGG + Chr7:6126327-6126346 MsG0780036299.01.T01:CDS 45.0%
!! GTTGATAGTTCGGCAACTGA+AGG + Chr7:6126349-6126368 MsG0780036299.01.T01:CDS 45.0%
!! TTTCGTCGGTGTTAGGGTTA+CGG - Chr7:6123654-6123673 None:intergenic 45.0%
!! TTTGAACGGATTGTCCCATG+TGG + Chr7:6125488-6125507 MsG0780036299.01.T01:intron 45.0%
!!! AACTGCCATTTTCCGTGATC+TGG + Chr7:6125344-6125363 MsG0780036299.01.T01:intron 45.0%
!!! AATAAAAAAAAATACTTTTT+AGG - Chr7:6124670-6124689 None:intergenic 5.0%
AAGGGATGAAGGTTCTCCGA+TGG + Chr7:6126219-6126238 MsG0780036299.01.T01:CDS 50.0%
AATAGCCATTTCGGCGAGAG+AGG + Chr7:6126384-6126403 MsG0780036299.01.T01:CDS 50.0%
ACAACACGCTCATCACAACC+AGG - Chr7:6123835-6123854 None:intergenic 50.0%
ACGAAGGCGAAGATCCGAAT+CGG + Chr7:6123799-6123818 MsG0780036299.01.T01:CDS 50.0%
ATTGCTGAGGATTTGCGTGG+TGG + Chr7:6123955-6123974 MsG0780036299.01.T01:CDS 50.0%
CAGTTTAGGCAGTAGGCTTC+AGG - Chr7:6127786-6127805 None:intergenic 50.0%
CATCCGCATCCTATCTAAGG+AGG + Chr7:6126723-6126742 MsG0780036299.01.T01:CDS 50.0%
CCTCCATAACCACCACCAAT+CGG - Chr7:6126151-6126170 None:intergenic 50.0%
CGAATCGGTGAAACTGTTCC+TGG + Chr7:6123814-6123833 MsG0780036299.01.T01:CDS 50.0%
CGCAAAATCGGCAGCATCAT+TGG + Chr7:6123739-6123758 MsG0780036299.01.T01:CDS 50.0%
CGTCTTCCAGTTTAGGCAGT+AGG - Chr7:6127793-6127812 None:intergenic 50.0%
CTATCCACGGTCCATGTATC+CGG + Chr7:6126192-6126211 MsG0780036299.01.T01:CDS 50.0%
CTCTTTCACTAGCCGGTTAC+TGG + Chr7:6126621-6126640 MsG0780036299.01.T01:CDS 50.0%
CTGAAGCCTACTGCCTAAAC+TGG + Chr7:6127784-6127803 MsG0780036299.01.T01:three_prime_UTR 50.0%
CTGGAAGACGAGATGAACCA+TGG + Chr7:6127803-6127822 MsG0780036299.01.T01:three_prime_UTR 50.0%
CTTGTGGCGTCTGATCAGAT+TGG + Chr7:6124836-6124855 MsG0780036299.01.T01:CDS 50.0%
GAGAGCTTGACACCAGTAAC+CGG - Chr7:6126636-6126655 None:intergenic 50.0%
GAGCACATGTTCGCAAGCTT+AGG - Chr7:6127963-6127982 None:intergenic 50.0%
GCTTACTTCTGCAGTTCCTG+GGG + Chr7:6126063-6126082 MsG0780036299.01.T01:CDS 50.0%
GCTTGACAACACTAAGCTCC+AGG - Chr7:6125448-6125467 None:intergenic 50.0%
GGCGACGGTTATGGAAACTA+TGG + Chr7:6127136-6127155 MsG0780036299.01.T01:CDS 50.0%
GGGAAGGGAAAGGCAACAAA+GGG - Chr7:6127736-6127755 None:intergenic 50.0%
GGGGGAACTAGATATTGCCA+AGG + Chr7:6126901-6126920 MsG0780036299.01.T01:CDS 50.0%
GGTAGAGATGGAAGACGACA+TGG + Chr7:6127058-6127077 MsG0780036299.01.T01:CDS 50.0%
GGTGGTCCTTATGGAGCTTA+TGG + Chr7:6127289-6127308 MsG0780036299.01.T01:CDS 50.0%
GGTGTGTGATTGGGAAAGGT+GGG + Chr7:6124858-6124877 MsG0780036299.01.T01:CDS 50.0%
GTATCTCGGAGGAGAAACCA+TGG + Chr7:6127543-6127562 MsG0780036299.01.T01:CDS 50.0%
GTCTCTTGGAGTGGTTTCGT+CGG - Chr7:6123668-6123687 None:intergenic 50.0%
GTGATTGCTGAGGATTTGCG+TGG + Chr7:6123952-6123971 MsG0780036299.01.T01:CDS 50.0%
GTTGTCAATGGCGGCTATTG+CGG + Chr7:6125286-6125305 MsG0780036299.01.T01:intron 50.0%
TATCCACGGTCCATGTATCC+GGG + Chr7:6126193-6126212 MsG0780036299.01.T01:CDS 50.0%
TATCTTCCTGCTTCGCCAGA+AGG + Chr7:6127013-6127032 MsG0780036299.01.T01:CDS 50.0%
TCAACTTTCTCACTGCACCG+GGG - Chr7:6126583-6126602 None:intergenic 50.0%
TCAGCTGTTTGGATGGGGAA+GGG - Chr7:6127751-6127770 None:intergenic 50.0%
TCGCGACGTTTATGTCGAGT+CGG + Chr7:6124305-6124324 MsG0780036299.01.T01:intron 50.0%
TCGCTGAATCTGCAGATCTC+TGG + Chr7:6125962-6125981 MsG0780036299.01.T01:intron 50.0%
TGCGAACCGGACAAAGGTAA+CGG - Chr7:6123723-6123742 None:intergenic 50.0%
TGGGGCTCCAATTATGGGAA+TGG + Chr7:6126123-6126142 MsG0780036299.01.T01:CDS 50.0%
TGTTTGGATGGGGAAGGGAA+AGG - Chr7:6127746-6127765 None:intergenic 50.0%
TTCTACCTCTCTCGCCGAAA+TGG - Chr7:6126392-6126411 None:intergenic 50.0%
TTGTCCGACAGATTGTCTGG+TGG + Chr7:6127519-6127538 MsG0780036299.01.T01:CDS 50.0%
TTTGCATCTGGCGACGGTTA+TGG + Chr7:6127127-6127146 MsG0780036299.01.T01:CDS 50.0%
! CATGGTGGGGCTCCAATTAT+GGG + Chr7:6126118-6126137 MsG0780036299.01.T01:CDS 50.0%
! CGATTTTGCGAACCGGACAA+AGG - Chr7:6123729-6123748 None:intergenic 50.0%
! CTGGTGTCAAGCTCTCGAAT+TGG + Chr7:6126640-6126659 MsG0780036299.01.T01:CDS 50.0%
! GCGGTTTGTTCAACCACTCA+TGG - Chr7:6125567-6125586 None:intergenic 50.0%
! GTGTGAACGTTTGTTGCCGT+AGG - Chr7:6123590-6123609 None:intergenic 50.0%
! TCATGGTGGGGCTCCAATTA+TGG + Chr7:6126117-6126136 MsG0780036299.01.T01:CDS 50.0%
!! AACGGTAAACGGTGTCGTCT+TGG - Chr7:6123705-6123724 None:intergenic 50.0%
!! AATGGTGGGTTCTCATGGTG+GGG + Chr7:6126105-6126124 MsG0780036299.01.T01:CDS 50.0%
!! ACGGAACGGACTAGTACTTC+TGG + Chr7:6127322-6127341 MsG0780036299.01.T01:CDS 50.0%
!! ACGGTAAACGGTGTCGTCTT+GGG - Chr7:6123704-6123723 None:intergenic 50.0%
!! AGGGTTACGGCGTTTGTTGT+TGG - Chr7:6123641-6123660 None:intergenic 50.0%
!! CAATGGTGGGTTCTCATGGT+GGG + Chr7:6126104-6126123 MsG0780036299.01.T01:CDS 50.0%
!! CGATTGGTGGTGGTTATGGA+GGG + Chr7:6126149-6126168 MsG0780036299.01.T01:CDS 50.0%
!! CGGAACGGACTAGTACTTCT+GGG + Chr7:6127323-6127342 MsG0780036299.01.T01:CDS 50.0%
!! GAGTGGTTTCGTCGGTGTTA+GGG - Chr7:6123660-6123679 None:intergenic 50.0%
!! GGAGGTGTTATAGGTAAGGG+CGG + Chr7:6126280-6126299 MsG0780036299.01.T01:CDS 50.0%
!! GGTTCAATGGTGGGTTCTCA+TGG + Chr7:6126100-6126119 MsG0780036299.01.T01:CDS 50.0%
!! TACTTGCACAAGAGCGTCCT+TGG - Chr7:6126921-6126940 None:intergenic 50.0%
!! TCAATGGTGGGTTCTCATGG+TGG + Chr7:6126103-6126122 MsG0780036299.01.T01:CDS 50.0%
!! TCCCCTAGATAGAGGCATCA+AGG - Chr7:6127890-6127909 None:intergenic 50.0%
!!! ATGCTGCCGATTTTGCGAAC+CGG - Chr7:6123736-6123755 None:intergenic 50.0%
ATCCCTTGAGCCCGGATACA+TGG - Chr7:6126206-6126225 None:intergenic 55.0%
ATGGGAATGGCTCCGATTGG+TGG + Chr7:6126136-6126155 MsG0780036299.01.T01:CDS 55.0%
CGACTGAGGATTCACGGACA+CGG - Chr7:6124481-6124500 None:intergenic 55.0%
CGCGACGTTTATGTCGAGTC+GGG + Chr7:6124306-6124325 MsG0780036299.01.T01:intron 55.0%
CTCAGCTGTTTGGATGGGGA+AGG - Chr7:6127752-6127771 None:intergenic 55.0%
CTGACAAGCGCATCCATAGC+AGG - Chr7:6123919-6123938 None:intergenic 55.0%
CTGCTATGGATGCGCTTGTC+AGG + Chr7:6123917-6123936 MsG0780036299.01.T01:CDS 55.0%
CTTGGTCGAGGTGGTCCTTA+TGG + Chr7:6127280-6127299 MsG0780036299.01.T01:CDS 55.0%
GAACCTTCATCCCTTGAGCC+CGG - Chr7:6126214-6126233 None:intergenic 55.0%
GATGGAAGACGACATGGACG+TGG + Chr7:6127064-6127083 MsG0780036299.01.T01:CDS 55.0%
GGGGAAGGGAAAGGCAACAA+AGG - Chr7:6127737-6127756 None:intergenic 55.0%
GGGTGTGTGATTGGGAAAGG+TGG + Chr7:6124857-6124876 MsG0780036299.01.T01:CDS 55.0%
GGTCACGGCGAAATTGCTTG+TGG + Chr7:6124820-6124839 MsG0780036299.01.T01:CDS 55.0%
GTATGCGGTCGGTGGTTCAA+TGG + Chr7:6126087-6126106 MsG0780036299.01.T01:CDS 55.0%
GTCCATGTATCCGGGCTCAA+GGG + Chr7:6126201-6126220 MsG0780036299.01.T01:CDS 55.0%
GTGAGACCGGTGCACAGATT+AGG + Chr7:6124903-6124922 MsG0780036299.01.T01:CDS 55.0%
TATCCGGGCTCAAGGGATGA+AGG + Chr7:6126208-6126227 MsG0780036299.01.T01:CDS 55.0%
TCAGGTGGATGGAGGGGATT+TGG + Chr7:6124799-6124818 MsG0780036299.01.T01:intron 55.0%
TGCAGTTCCTGGGGTGTATG+CGG + Chr7:6126072-6126091 MsG0780036299.01.T01:CDS 55.0%
TGGTATCCGTGTCTGTGGTG+TGG + Chr7:6124078-6124097 MsG0780036299.01.T01:intron 55.0%
! CAGCTGTGCTTTTGCAACCC+CGG + Chr7:6126563-6126582 MsG0780036299.01.T01:CDS 55.0%
! GGAGTGGTTTCGTCGGTGTT+AGG - Chr7:6123661-6123680 None:intergenic 55.0%
! GGATGGAGGGGATTTGGTCA+CGG + Chr7:6124805-6124824 MsG0780036299.01.T01:CDS 55.0%
! GGTGTTATAGGTAAGGGCGG+TGG + Chr7:6126283-6126302 MsG0780036299.01.T01:CDS 55.0%
! TGTCTGGTGGTGTATCTCGG+AGG + Chr7:6127532-6127551 MsG0780036299.01.T01:CDS 55.0%
!! CCGATTGGTGGTGGTTATGG+AGG + Chr7:6126148-6126167 MsG0780036299.01.T01:CDS 55.0%
!! CTCTGATTCAGGTTGCGGCA+CGG + Chr7:6126008-6126027 MsG0780036299.01.T01:CDS 55.0%
!! GCTCCGATTGGTGGTGGTTA+TGG + Chr7:6126145-6126164 MsG0780036299.01.T01:CDS 55.0%
ATCGGCAGCATCATTGGCCG+CGG + Chr7:6123745-6123764 MsG0780036299.01.T01:CDS 60.0%
CATATGCGGCAGCTTGGTCG+AGG + Chr7:6127268-6127287 MsG0780036299.01.T01:intron 60.0%
CGGACACCACACCACAGACA+CGG - Chr7:6124087-6124106 None:intergenic 60.0%
GCGGTCGGTGGTTCAATGGT+GGG + Chr7:6126091-6126110 MsG0780036299.01.T01:CDS 60.0%
GCTTCGCCAGAAGGACCAGA+TGG + Chr7:6127022-6127041 MsG0780036299.01.T01:CDS 60.0%
GGAAGACGACATGGACGTGG+TGG + Chr7:6127067-6127086 MsG0780036299.01.T01:CDS 60.0%
GGAATGGCTCCGATTGGTGG+TGG + Chr7:6126139-6126158 MsG0780036299.01.T01:CDS 60.0%
GGTCCATGTATCCGGGCTCA+AGG + Chr7:6126200-6126219 MsG0780036299.01.T01:CDS 60.0%
GTTCCTGGGGTGTATGCGGT+CGG + Chr7:6126076-6126095 MsG0780036299.01.T01:CDS 60.0%
TCTGGTCCTTCTGGCGAAGC+AGG - Chr7:6127022-6127041 None:intergenic 60.0%
TGCGGTCGGTGGTTCAATGG+TGG + Chr7:6126090-6126109 MsG0780036299.01.T01:CDS 60.0%
! AAACCTTGGTGGGTCCCTGC+AGG + Chr7:6127572-6127591 MsG0780036299.01.T01:exon 60.0%
!! ACTGGGTAGAGGCGTCAAGG+TGG - Chr7:6127846-6127865 None:intergenic 60.0%
!! CTGGGTAGAGGCGTCAAGGT+GGG - Chr7:6127845-6127864 None:intergenic 60.0%
!! GTCACTGGGTAGAGGCGTCA+AGG - Chr7:6127849-6127868 None:intergenic 60.0%
ATGCGGCAGCTTGGTCGAGG+TGG + Chr7:6127271-6127290 MsG0780036299.01.T01:intron 65.0%
CTACCTGCAGGGACCCACCA+AGG - Chr7:6127578-6127597 None:intergenic 65.0%
GAGCCCGGATACATGGACCG+TGG - Chr7:6126199-6126218 None:intergenic 65.0%
GTTTCACGATCTCGCCGCCG+CGG - Chr7:6123765-6123784 None:intergenic 65.0%
CCACCGACCGCATACACCCC+AGG - Chr7:6126082-6126101 None:intergenic 70.0%
CCTGGGGTGTATGCGGTCGG+TGG + Chr7:6126079-6126098 MsG0780036299.01.T01:CDS 70.0%
GGCAGCATCATTGGCCGCGG+CGG + Chr7:6123748-6123767 MsG0780036299.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 6123471 6128209 6123471 ID=MsG0780036299.01;Name=MsG0780036299.01
Chr7 mRNA 6123471 6128209 6123471 ID=MsG0780036299.01.T01;Parent=MsG0780036299.01;Name=MsG0780036299.01.T01;_AED=0.33;_eAED=0.33;_QI=97|1|1|1|0.85|0.75|8|464|569
Chr7 exon 6123471 6124005 6123471 ID=MsG0780036299.01.T01:exon:3259;Parent=MsG0780036299.01.T01
Chr7 exon 6124803 6124982 6124803 ID=MsG0780036299.01.T01:exon:3260;Parent=MsG0780036299.01.T01
Chr7 exon 6125977 6126405 6125977 ID=MsG0780036299.01.T01:exon:3261;Parent=MsG0780036299.01.T01
Chr7 exon 6126529 6126786 6126529 ID=MsG0780036299.01.T01:exon:3262;Parent=MsG0780036299.01.T01
Chr7 exon 6126896 6127168 6126896 ID=MsG0780036299.01.T01:exon:3263;Parent=MsG0780036299.01.T01
Chr7 exon 6127280 6127344 6127280 ID=MsG0780036299.01.T01:exon:3264;Parent=MsG0780036299.01.T01
Chr7 exon 6127506 6127593 6127506 ID=MsG0780036299.01.T01:exon:3265;Parent=MsG0780036299.01.T01
Chr7 exon 6127767 6128209 6127767 ID=MsG0780036299.01.T01:exon:3266;Parent=MsG0780036299.01.T01
Chr7 five_prime_UTR 6123471 6123567 6123471 ID=MsG0780036299.01.T01:five_prime_utr;Parent=MsG0780036299.01.T01
Chr7 CDS 6123568 6124005 6123568 ID=MsG0780036299.01.T01:cds;Parent=MsG0780036299.01.T01
Chr7 CDS 6124803 6124982 6124803 ID=MsG0780036299.01.T01:cds;Parent=MsG0780036299.01.T01
Chr7 CDS 6125977 6126405 6125977 ID=MsG0780036299.01.T01:cds;Parent=MsG0780036299.01.T01
Chr7 CDS 6126529 6126786 6126529 ID=MsG0780036299.01.T01:cds;Parent=MsG0780036299.01.T01
Chr7 CDS 6126896 6127168 6126896 ID=MsG0780036299.01.T01:cds;Parent=MsG0780036299.01.T01
Chr7 CDS 6127280 6127344 6127280 ID=MsG0780036299.01.T01:cds;Parent=MsG0780036299.01.T01
Chr7 CDS 6127506 6127572 6127506 ID=MsG0780036299.01.T01:cds;Parent=MsG0780036299.01.T01
Chr7 three_prime_UTR 6127573 6127593 6127573 ID=MsG0780036299.01.T01:three_prime_utr;Parent=MsG0780036299.01.T01
Chr7 three_prime_UTR 6127767 6128209 6127767 ID=MsG0780036299.01.T01:three_prime_utr;Parent=MsG0780036299.01.T01
Gene Sequence

>MsG0780036299.01.T01

ATGGCTGGTCAAAGAACATCCTACGGCAACAAACGTTCACACTCACACAACAGCGTTGATGACAACAGAACCAACAACAAACGCCGTAACCCTAACACCGACGAAACCACTCCAAGAGACACATTTCACATAACCCAAGACGACACCGTTTACCGTTACCTTTGTCCGGTTCGCAAAATCGGCAGCATCATTGGCCGCGGCGGCGAGATCGTGAAACAACTCCGTCTTGATACGAAGGCGAAGATCCGAATCGGTGAAACTGTTCCTGGTTGTGATGAGCGTGTTGTTACGGTTTATAGTGTTTCTGATGAATCCAATGATTTTGAAGATTCTGGTGAGTTTATGTGTCCTGCTATGGATGCGCTTGTCAGGATTCATCAGAAGGTGATTGCTGAGGATTTGCGTGGTGGTGAAGATGAAGACGTTGATATGGAGAAGGTGGATGGAGGGGATTTGGTCACGGCGAAATTGCTTGTGGCGTCTGATCAGATTGGGTGTGTGATTGGGAAAGGTGGGCAGATTGTTCAGAATATAAGGAGTGAGACCGGTGCACAGATTAGGATTCTTAAGGATGATCGGCTGCCACTTTGTGCGCTGAATTCTGATGAGCTTGTTCAGATCTCTGGTGAGATTGCTGTTGTGAAAAAGGCTCTGATTCAGGTTGCGGCACGGCTTCATGACAACCCTTCACGTACTCAACATTTGCTTACTTCTGCAGTTCCTGGGGTGTATGCGGTCGGTGGTTCAATGGTGGGTTCTCATGGTGGGGCTCCAATTATGGGAATGGCTCCGATTGGTGGTGGTTATGGAGGGTATAAAGGTGATGTTGGAGACTATCCACGGTCCATGTATCCGGGCTCAAGGGATGAAGGTTCTCCGATGGAGTTTTCAGTCCGATTTGTTTGTCCAACTGCTAACATTGGAGGTGTTATAGGTAAGGGCGGTGGTATAATAAATCAAATTAGGCAGGATTCTGGGGCAAATATCAAGGTTGATAGTTCGGCAACTGAAGGAGATGACTGCTTAATAGCCATTTCGGCGAGAGAGTTCTTTGAGGATTCATTCTCCGCAACAATTGAAGCAGCTGTGCTTTTGCAACCCCGGTGCAGTGAGAAAGTTGAAAGAGATTCTGGTATTCTCTCTTTCACTAGCCGGTTACTGGTGTCAAGCTCTCGAATTGGTTGCCTTATTGGTAAAGGAGGATCAATCATTACTGAGATGAGAAGGCTTACAAAAGCTAACATCCGCATCCTATCTAAGGAGGATCTCCCTAAAATTGCAACTGAAGATGATGAAATGGTGCAGATTTCGGGGGAACTAGATATTGCCAAGGACGCTCTTGTGCAAGTACTTACCCGGCTGAGAGCAAATCTTTTTGATAAGGAGCGTTCTGTCTCATCATTGCTTCCACCAGTACTTGCATATCTTCCTGCTTCGCCAGAAGGACCAGATGGTTTCAACTATGAAGGTAGAGATGGAAGACGACATGGACGTGGTGGCTATTCTTATTCTGATGGCTATGGAGGCTCAAGTGATTTTGCATCTGGCGACGGTTATGGAAACTATGGAAGTTCACAGCTTGGTCGAGGTGGTCCTTATGGAGCTTATGGAAGTTATGCTACGGAACGGACTAGTACTTCTGGATTGTCTGATAGATTGTCCGACAGATTGTCTGGTGGTGTATCTCGGAGGAGAAACCATGGTTACTAA
Protein sequence

>MsG0780036299.01.T01

MAGQRTSYGNKRSHSHNSVDDNRTNNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMDALVRIHQKVIAEDLRGGEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLHDNPSRTQHLLTSAVPGVYAVGGSMVGSHGGAPIMGMAPIGGGYGGYKGDVGDYPRSMYPGSRDEGSPMEFSVRFVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISAREFFEDSFSATIEAAVLLQPRCSEKVERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDDEMVQISGELDIAKDALVQVLTRLRANLFDKERSVSSLLPPVLAYLPASPEGPDGFNYEGRDGRRHGRGGYSYSDGYGGSSDFASGDGYGNYGSSQLGRGGPYGAYGSYATERTSTSGLSDRLSDRLSGGVSRRRNHGY*