Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036508.01.T01 | XP_003621423.1 | 94.255 | 470 | 27 | 0 | 1 | 470 | 194 | 663 | 0 | 937 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036508.01.T01 | D4AZ24 | 27.368 | 475 | 292 | 19 | 5 | 446 | 420 | 874 | 6.66E-33 | 136 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036508.01.T01 | G7L591 | 94.255 | 470 | 27 | 0 | 1 | 470 | 194 | 663 | 0.0 | 937 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000650.01 | MsG0780036508.01 | 0.817729 | 2.835862e-52 | 2.081814e-49 |
| MsG0180006054.01 | MsG0780036508.01 | 0.804605 | 1.993597e-49 | 1.032334e-46 |
| MsG0480021948.01 | MsG0780036508.01 | 0.803209 | 3.887633e-49 | 1.942164e-46 |
| MsG0480023251.01 | MsG0780036508.01 | 0.824918 | 6.219914e-54 | 5.586503e-51 |
| MsG0280007547.01 | MsG0780036508.01 | 0.819637 | 1.045953e-52 | 8.093684e-50 |
| MsG0280009754.01 | MsG0780036508.01 | 0.804971 | 1.672000e-49 | 8.740529e-47 |
| MsG0780036508.01 | MsG0880042161.01 | 0.815760 | 7.839124e-52 | 5.452863e-49 |
| MsG0780036508.01 | MsG0880047294.01 | 0.822754 | 1.999738e-53 | 1.689026e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036508.01.T01 | MTR_7g013170 | 94.255 | 470 | 27 | 0 | 1 | 470 | 194 | 663 | 0.0 | 937 |
| MsG0780036508.01.T01 | MTR_7g013810 | 81.237 | 469 | 88 | 0 | 2 | 470 | 192 | 660 | 0.0 | 805 |
| MsG0780036508.01.T01 | MTR_6g016785 | 65.254 | 472 | 160 | 3 | 2 | 470 | 259 | 729 | 0.0 | 658 |
| MsG0780036508.01.T01 | MTR_6g016795 | 67.373 | 472 | 152 | 1 | 1 | 470 | 194 | 665 | 0.0 | 656 |
| MsG0780036508.01.T01 | MTR_6g016800 | 65.817 | 471 | 158 | 2 | 2 | 470 | 196 | 665 | 0.0 | 645 |
| MsG0780036508.01.T01 | MTR_6g016790 | 63.002 | 473 | 171 | 3 | 2 | 470 | 187 | 659 | 0.0 | 612 |
| MsG0780036508.01.T01 | MTR_6g016810 | 63.002 | 473 | 171 | 3 | 2 | 470 | 187 | 659 | 0.0 | 607 |
| MsG0780036508.01.T01 | MTR_6g016820 | 66.173 | 473 | 155 | 4 | 2 | 470 | 197 | 668 | 0.0 | 581 |
| MsG0780036508.01.T01 | MTR_6g016845 | 62.368 | 473 | 174 | 2 | 2 | 470 | 206 | 678 | 0.0 | 581 |
| MsG0780036508.01.T01 | MTR_6g016840 | 63.158 | 475 | 168 | 5 | 2 | 470 | 200 | 673 | 0.0 | 579 |
| MsG0780036508.01.T01 | MTR_6g016860 | 60.722 | 443 | 170 | 2 | 2 | 440 | 71 | 513 | 0.0 | 547 |
| MsG0780036508.01.T01 | MTR_6g016855 | 60.160 | 374 | 136 | 2 | 97 | 469 | 2 | 363 | 6.18e-159 | 454 |
| MsG0780036508.01.T01 | MTR_7g028445 | 54.066 | 455 | 163 | 5 | 2 | 451 | 197 | 610 | 2.71e-158 | 462 |
| MsG0780036508.01.T01 | MTR_4g036905 | 54.066 | 455 | 163 | 5 | 2 | 451 | 197 | 610 | 2.71e-158 | 462 |
| MsG0780036508.01.T01 | MTR_1g079270 | 53.231 | 325 | 147 | 3 | 34 | 356 | 47 | 368 | 4.00e-113 | 338 |
| MsG0780036508.01.T01 | MTR_6g037090 | 55.230 | 239 | 73 | 2 | 2 | 238 | 104 | 310 | 1.35e-81 | 255 |
| MsG0780036508.01.T01 | MTR_1g079320 | 39.210 | 329 | 119 | 7 | 158 | 452 | 2 | 283 | 4.23e-63 | 206 |
| MsG0780036508.01.T01 | MTR_7g112730 | 45.992 | 237 | 89 | 5 | 221 | 457 | 90 | 287 | 7.94e-59 | 195 |
| MsG0780036508.01.T01 | MTR_6g007703 | 41.975 | 162 | 50 | 3 | 229 | 346 | 4 | 165 | 1.85e-31 | 119 |
| MsG0780036508.01.T01 | MTR_6g007717 | 62.366 | 93 | 35 | 0 | 72 | 164 | 16 | 108 | 1.92e-28 | 111 |
| MsG0780036508.01.T01 | MTR_6g007717 | 40.230 | 87 | 39 | 2 | 346 | 432 | 123 | 196 | 3.63e-11 | 62.8 |
| MsG0780036508.01.T01 | MTR_6g007700 | 68.333 | 60 | 18 | 1 | 97 | 156 | 6 | 64 | 6.05e-20 | 86.3 |
| MsG0780036508.01.T01 | MTR_6g007713 | 42.056 | 107 | 36 | 3 | 275 | 381 | 3 | 83 | 2.79e-19 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036508.01.T01 | AT5G15870 | 61.996 | 471 | 173 | 3 | 5 | 470 | 243 | 712 | 0.0 | 612 |
| MsG0780036508.01.T01 | AT1G18310 | 57.434 | 491 | 170 | 4 | 5 | 470 | 172 | 648 | 0.0 | 589 |
Find 77 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGATCATCATTATCATTT+AGG | 0.107695 | 7:+9037356 | MsG0780036508.01.T01:CDS |
| ATCAAGAACTTGCTCATATT+TGG | 0.158095 | 7:-9036739 | None:intergenic |
| ATTTCTTCAAGTTGCATTCT+TGG | 0.185134 | 7:+9037525 | MsG0780036508.01.T01:CDS |
| TTGATAATTGGAATCACTTT+AGG | 0.192571 | 7:-9037191 | None:intergenic |
| ACTTGCTCATATTTGGAATT+AGG | 0.205100 | 7:-9036732 | None:intergenic |
| AATTTCATTTGGAGTATAAA+TGG | 0.222685 | 7:+9036811 | MsG0780036508.01.T01:CDS |
| AAGAGTTTGCAAAAGAAAAT+AGG | 0.230576 | 7:+9037750 | MsG0780036508.01.T01:CDS |
| ATGATCATCATTATCATTTA+GGG | 0.264264 | 7:+9037357 | MsG0780036508.01.T01:CDS |
| AATGATTCAGGTGTTGATTT+TGG | 0.265171 | 7:+9037320 | MsG0780036508.01.T01:CDS |
| ATACGAATTATACCGGAAAA+TGG | 0.268083 | 7:-9036699 | None:intergenic |
| TGATAATTGGAATCACTTTA+GGG | 0.276522 | 7:-9037190 | None:intergenic |
| GAATACCATGTTACATTAAC+AGG | 0.293671 | 7:-9037002 | None:intergenic |
| TTAAACAAAGACTCAGTTAT+AGG | 0.309069 | 7:-9037875 | None:intergenic |
| CATCAAGAATAAATTTCATT+TGG | 0.309487 | 7:+9036800 | MsG0780036508.01.T01:CDS |
| GACAAAGATCTTGTTGATAT+TGG | 0.310271 | 7:+9037650 | MsG0780036508.01.T01:CDS |
| CAACAAGGTGTTAATGATTC+AGG | 0.319043 | 7:+9037308 | MsG0780036508.01.T01:CDS |
| ACTCATTCAGTAATCTCTTA+TGG | 0.341256 | 7:+9038062 | MsG0780036508.01.T01:CDS |
| TATCGGAGATTCATGGATAT+TGG | 0.355084 | 7:+9036971 | MsG0780036508.01.T01:CDS |
| TTTCTTCAAGTTGCATTCTT+GGG | 0.361359 | 7:+9037526 | MsG0780036508.01.T01:CDS |
| ATGAAACAAATGATGATAGA+TGG | 0.370473 | 7:+9037951 | MsG0780036508.01.T01:CDS |
| TATTATTCAGCAGCATTGAT+AGG | 0.372542 | 7:+9037614 | MsG0780036508.01.T01:CDS |
| GCAAAAGAAAATAGGATTGT+TGG | 0.376923 | 7:+9037758 | MsG0780036508.01.T01:CDS |
| AAGTTGCATTCTTGGGCTGC+AGG | 0.385145 | 7:+9037533 | MsG0780036508.01.T01:CDS |
| AAATGGCAAAAGAAATGTTC+TGG | 0.392519 | 7:+9036828 | MsG0780036508.01.T01:CDS |
| GGTGATCTCGTTGGTGTTAT+CGG | 0.409756 | 7:+9036954 | MsG0780036508.01.T01:CDS |
| TTCACAAGTGCATAAGTTTG+AGG | 0.416360 | 7:-9037443 | None:intergenic |
| GGAGTGACTGAATATGAAAA+TGG | 0.418424 | 7:+9037554 | MsG0780036508.01.T01:CDS |
| GCATCATTCCTTATCTGCTA+TGG | 0.423980 | 7:-9038090 | None:intergenic |
| TTGAAGTATACAAGTATTGA+TGG | 0.425832 | 7:+9036933 | MsG0780036508.01.T01:CDS |
| TCTTCAGCAATAACAACAAA+TGG | 0.435660 | 7:+9037098 | MsG0780036508.01.T01:CDS |
| ATGTTGGAAAGCTTTGCTAA+TGG | 0.436422 | 7:+9038037 | MsG0780036508.01.T01:CDS |
| AGCACTTGTTACCCTGTCTC+TGG | 0.438878 | 7:+9036768 | MsG0780036508.01.T01:CDS |
| AAATCAATGCTACACAAACT+TGG | 0.444978 | 7:+9037693 | MsG0780036508.01.T01:CDS |
| TTTGTTTCATTCTTCAAAGA+AGG | 0.459629 | 7:-9037938 | None:intergenic |
| ATTGAAGAAGATTAGAATGT+TGG | 0.460083 | 7:+9038021 | MsG0780036508.01.T01:CDS |
| AATGGAACTTTCAAAGGGAA+TGG | 0.471349 | 7:+9037248 | MsG0780036508.01.T01:CDS |
| ATGTTTGCATCACCAGAGAC+AGG | 0.471647 | 7:-9036780 | None:intergenic |
| CTTCTGAATGTAGAGGGTGT+AGG | 0.478526 | 7:+9037825 | MsG0780036508.01.T01:CDS |
| TGGTTGAATGGAACTTTCAA+AGG | 0.479795 | 7:+9037242 | MsG0780036508.01.T01:CDS |
| ACTGAGTCTTTGTTTAATGA+TGG | 0.482463 | 7:+9037881 | MsG0780036508.01.T01:CDS |
| TTGGTGTTATCGGAGATTCA+TGG | 0.484069 | 7:+9036964 | MsG0780036508.01.T01:CDS |
| TAGGCAACAAAGGCATAACT+TGG | 0.492338 | 7:-9037856 | None:intergenic |
| AATTATACCGGAAAATGGAT+TGG | 0.492399 | 7:-9036694 | None:intergenic |
| AAATCAAAACACCTTAAAGT+TGG | 0.492827 | 7:-9037506 | None:intergenic |
| ACAAATGATGATAGATGGAA+AGG | 0.492847 | 7:+9037956 | MsG0780036508.01.T01:CDS |
| ACTATTGAGCCATGGTTGAA+TGG | 0.492951 | 7:+9037230 | MsG0780036508.01.T01:CDS |
| TTCTGAATGTAGAGGGTGTA+GGG | 0.505537 | 7:+9037826 | MsG0780036508.01.T01:CDS |
| GTAACATGGTATTCAAGTAA+AGG | 0.506434 | 7:+9037011 | MsG0780036508.01.T01:CDS |
| AATGACAATACGAATTATAC+CGG | 0.508013 | 7:-9036706 | None:intergenic |
| TGGTGGATCCATAGCAGATA+AGG | 0.515694 | 7:+9038082 | MsG0780036508.01.T01:CDS |
| AGCTCTTGTTAAAGATGTGA+AGG | 0.520226 | 7:+9037067 | MsG0780036508.01.T01:CDS |
| GGTTGAATGGAACTTTCAAA+GGG | 0.525034 | 7:+9037243 | MsG0780036508.01.T01:CDS |
| ATAAGAGAGATAGTAAACTT+TGG | 0.529782 | 7:+9037795 | MsG0780036508.01.T01:CDS |
| AGAGAGATAGTAAACTTTGG+TGG | 0.531167 | 7:+9037798 | MsG0780036508.01.T01:CDS |
| CAAATGATGATAGATGGAAA+GGG | 0.553318 | 7:+9037957 | MsG0780036508.01.T01:CDS |
| GGGTTTATCTATGCTTTGCA+AGG | 0.553333 | 7:+9037977 | MsG0780036508.01.T01:CDS |
| GATAGAAGCTTAACATGAAG+AGG | 0.554440 | 7:-9036873 | None:intergenic |
| TGACTGAATATGAAAATGGA+AGG | 0.566187 | 7:+9037558 | MsG0780036508.01.T01:CDS |
| CTAATCCTGTTAATGTAACA+TGG | 0.568163 | 7:+9036997 | MsG0780036508.01.T01:CDS |
| GACTCAGTTATAGGCAACAA+AGG | 0.569869 | 7:-9037866 | None:intergenic |
| TGAAGGAAACTATTGAGCCA+TGG | 0.573025 | 7:+9037222 | MsG0780036508.01.T01:CDS |
| GAGAGATAGTAAACTTTGGT+GGG | 0.573134 | 7:+9037799 | MsG0780036508.01.T01:CDS |
| GCATTGATAGGTCTAGCATA+TGG | 0.574246 | 7:+9037626 | MsG0780036508.01.T01:CDS |
| GGGCTCCTTCTGAATGTAGA+GGG | 0.574843 | 7:+9037819 | MsG0780036508.01.T01:CDS |
| TCAATGCTACACAAACTTGG+TGG | 0.591551 | 7:+9037696 | MsG0780036508.01.T01:CDS |
| ATGCTAAGGAGCTTGTGGAA+TGG | 0.594141 | 7:+9037909 | MsG0780036508.01.T01:CDS |
| TGGGCTCCTTCTGAATGTAG+AGG | 0.598965 | 7:+9037818 | MsG0780036508.01.T01:CDS |
| TAATGATGGTGTTTATGCTA+AGG | 0.602296 | 7:+9037895 | MsG0780036508.01.T01:CDS |
| TGTTTATGCTAAGGAGCTTG+TGG | 0.609124 | 7:+9037904 | MsG0780036508.01.T01:CDS |
| TTGAAAGTTCCATTCAACCA+TGG | 0.615232 | 7:-9037239 | None:intergenic |
| TGTTTGCATCACCAGAGACA+GGG | 0.615876 | 7:-9036779 | None:intergenic |
| CTACACCCTCTACATTCAGA+AGG | 0.621458 | 7:-9037824 | None:intergenic |
| CATTCAGTAATCTCTTATGG+TGG | 0.624441 | 7:+9038065 | MsG0780036508.01.T01:CDS |
| AGTATTGATGGTGATCTCGT+TGG | 0.634378 | 7:+9036945 | MsG0780036508.01.T01:CDS |
| ATAGAAGCTTAACATGAAGA+GGG | 0.646646 | 7:-9036872 | None:intergenic |
| GGTGGATTAGTTACTCAACA+AGG | 0.684233 | 7:+9037293 | MsG0780036508.01.T01:CDS |
| AGATTGTTTCAAGAGCTGCA+AGG | 0.688978 | 7:+9037138 | MsG0780036508.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTGAAAAAAATTTGTA+TGG | + | Chr7:9037725-9037744 | MsG0780036508.01.T01:CDS | 15.0% |
| !!! | AATTATCAAGAATTTTTTGA+AGG | + | Chr7:9037205-9037224 | MsG0780036508.01.T01:CDS | 15.0% |
| !!! | TTCAAAAAATTCTTGATAAT+TGG | - | Chr7:9037206-9037225 | None:intergenic | 15.0% |
| !! | AATGATCATCATTATCATTT+AGG | + | Chr7:9037356-9037375 | MsG0780036508.01.T01:CDS | 20.0% |
| !! | ATGATCATCATTATCATTTA+GGG | + | Chr7:9037357-9037376 | MsG0780036508.01.T01:CDS | 20.0% |
| !! | CATCAAGAATAAATTTCATT+TGG | + | Chr7:9036800-9036819 | MsG0780036508.01.T01:CDS | 20.0% |
| !!! | AATTTCATTTGGAGTATAAA+TGG | + | Chr7:9036811-9036830 | MsG0780036508.01.T01:CDS | 20.0% |
| !!! | ACAAATGGATCTTATTTTTA+TGG | + | Chr7:9037113-9037132 | MsG0780036508.01.T01:CDS | 20.0% |
| !!! | TTTTCTCTATGAAAAAAAGT+GGG | + | Chr7:9037271-9037290 | MsG0780036508.01.T01:CDS | 20.0% |
| ! | AAATCAAAACACCTTAAAGT+TGG | - | Chr7:9037509-9037528 | None:intergenic | 25.0% |
| ! | AAGAGTTTGCAAAAGAAAAT+AGG | + | Chr7:9037750-9037769 | MsG0780036508.01.T01:CDS | 25.0% |
| ! | AATGACAATACGAATTATAC+CGG | - | Chr7:9036709-9036728 | None:intergenic | 25.0% |
| ! | ACAAAAACTATCCAACTTTA+AGG | + | Chr7:9037495-9037514 | MsG0780036508.01.T01:CDS | 25.0% |
| ! | ATAAGAGAGATAGTAAACTT+TGG | + | Chr7:9037795-9037814 | MsG0780036508.01.T01:CDS | 25.0% |
| ! | ATGAAACAAATGATGATAGA+TGG | + | Chr7:9037951-9037970 | MsG0780036508.01.T01:CDS | 25.0% |
| ! | ATTGAAGAAGATTAGAATGT+TGG | + | Chr7:9038021-9038040 | MsG0780036508.01.T01:CDS | 25.0% |
| ! | TGATAATTGGAATCACTTTA+GGG | - | Chr7:9037193-9037212 | None:intergenic | 25.0% |
| ! | TTAAACAAAGACTCAGTTAT+AGG | - | Chr7:9037878-9037897 | None:intergenic | 25.0% |
| ! | TTTCTCTATGAAAAAAAGTG+GGG | + | Chr7:9037272-9037291 | MsG0780036508.01.T01:CDS | 25.0% |
| ! | TTTGTTTCATTCTTCAAAGA+AGG | - | Chr7:9037941-9037960 | None:intergenic | 25.0% |
| !! | GTGAAAGATTTTATGAACTT+GGG | + | Chr7:9037461-9037480 | MsG0780036508.01.T01:CDS | 25.0% |
| !! | GTTTTCTCTATGAAAAAAAG+TGG | + | Chr7:9037270-9037289 | MsG0780036508.01.T01:CDS | 25.0% |
| !! | TGCAAAAATTGATCCTTTTT+GGG | + | Chr7:9037406-9037425 | MsG0780036508.01.T01:CDS | 25.0% |
| !! | TGTGAAAGATTTTATGAACT+TGG | + | Chr7:9037460-9037479 | MsG0780036508.01.T01:CDS | 25.0% |
| !! | TTGATAATTGGAATCACTTT+AGG | - | Chr7:9037194-9037213 | None:intergenic | 25.0% |
| !! | TTGCAAAAATTGATCCTTTT+TGG | + | Chr7:9037405-9037424 | MsG0780036508.01.T01:CDS | 25.0% |
| !!! | CATTTAGGGTATTTTCTTTA+TGG | + | Chr7:9037371-9037390 | MsG0780036508.01.T01:CDS | 25.0% |
| !!! | TTGAAGTATACAAGTATTGA+TGG | + | Chr7:9036933-9036952 | MsG0780036508.01.T01:CDS | 25.0% |
| AAATCAATGCTACACAAACT+TGG | + | Chr7:9037693-9037712 | MsG0780036508.01.T01:CDS | 30.0% | |
| AAATGGCAAAAGAAATGTTC+TGG | + | Chr7:9036828-9036847 | MsG0780036508.01.T01:CDS | 30.0% | |
| AATTATACCGGAAAATGGAT+TGG | - | Chr7:9036697-9036716 | None:intergenic | 30.0% | |
| ACAAATGATGATAGATGGAA+AGG | + | Chr7:9037956-9037975 | MsG0780036508.01.T01:CDS | 30.0% | |
| ACTCATTCAGTAATCTCTTA+TGG | + | Chr7:9038062-9038081 | MsG0780036508.01.T01:CDS | 30.0% | |
| ATACGAATTATACCGGAAAA+TGG | - | Chr7:9036702-9036721 | None:intergenic | 30.0% | |
| ATAGAAGCTTAACATGAAGA+GGG | - | Chr7:9036875-9036894 | None:intergenic | 30.0% | |
| CAAATGATGATAGATGGAAA+GGG | + | Chr7:9037957-9037976 | MsG0780036508.01.T01:CDS | 30.0% | |
| CTAATCCTGTTAATGTAACA+TGG | + | Chr7:9036997-9037016 | MsG0780036508.01.T01:CDS | 30.0% | |
| GAATACCATGTTACATTAAC+AGG | - | Chr7:9037005-9037024 | None:intergenic | 30.0% | |
| GACAAAGATCTTGTTGATAT+TGG | + | Chr7:9037650-9037669 | MsG0780036508.01.T01:CDS | 30.0% | |
| GCAAAAGAAAATAGGATTGT+TGG | + | Chr7:9037758-9037777 | MsG0780036508.01.T01:CDS | 30.0% | |
| GTAACATGGTATTCAAGTAA+AGG | + | Chr7:9037011-9037030 | MsG0780036508.01.T01:CDS | 30.0% | |
| TCTTCAGCAATAACAACAAA+TGG | + | Chr7:9037098-9037117 | MsG0780036508.01.T01:CDS | 30.0% | |
| TGACTGAATATGAAAATGGA+AGG | + | Chr7:9037558-9037577 | MsG0780036508.01.T01:CDS | 30.0% | |
| ! | ACTGAGTCTTTGTTTAATGA+TGG | + | Chr7:9037881-9037900 | MsG0780036508.01.T01:CDS | 30.0% |
| ! | ACTTGCTCATATTTGGAATT+AGG | - | Chr7:9036735-9036754 | None:intergenic | 30.0% |
| ! | ATAGGATTGTTGGTATTTTG+TGG | + | Chr7:9037768-9037787 | MsG0780036508.01.T01:CDS | 30.0% |
| ! | ATCAAGAACTTGCTCATATT+TGG | - | Chr7:9036742-9036761 | None:intergenic | 30.0% |
| ! | GCAAAAATTGATCCTTTTTG+GGG | + | Chr7:9037407-9037426 | MsG0780036508.01.T01:CDS | 30.0% |
| ! | TAATGATGGTGTTTATGCTA+AGG | + | Chr7:9037895-9037914 | MsG0780036508.01.T01:CDS | 30.0% |
| ! | TAGGATTGTTGGTATTTTGT+GGG | + | Chr7:9037769-9037788 | MsG0780036508.01.T01:CDS | 30.0% |
| ! | TTATACTTTTGTCCCCAAAA+AGG | - | Chr7:9037422-9037441 | None:intergenic | 30.0% |
| !! | ATTTCTTCAAGTTGCATTCT+TGG | + | Chr7:9037525-9037544 | MsG0780036508.01.T01:CDS | 30.0% |
| !! | GATAGTTTTTGTTATCCCTT+TGG | - | Chr7:9037487-9037506 | None:intergenic | 30.0% |
| !! | TATTATTCAGCAGCATTGAT+AGG | + | Chr7:9037614-9037633 | MsG0780036508.01.T01:CDS | 30.0% |
| !! | TTTCTTCAAGTTGCATTCTT+GGG | + | Chr7:9037526-9037545 | MsG0780036508.01.T01:CDS | 30.0% |
| !!! | AATGATTCAGGTGTTGATTT+TGG | + | Chr7:9037320-9037339 | MsG0780036508.01.T01:CDS | 30.0% |
| AATGGAACTTTCAAAGGGAA+TGG | + | Chr7:9037248-9037267 | MsG0780036508.01.T01:CDS | 35.0% | |
| AGAGAGATAGTAAACTTTGG+TGG | + | Chr7:9037798-9037817 | MsG0780036508.01.T01:CDS | 35.0% | |
| AGCTCTTGTTAAAGATGTGA+AGG | + | Chr7:9037067-9037086 | MsG0780036508.01.T01:CDS | 35.0% | |
| ATGTTGGAAAGCTTTGCTAA+TGG | + | Chr7:9038037-9038056 | MsG0780036508.01.T01:CDS | 35.0% | |
| CATTCAGTAATCTCTTATGG+TGG | + | Chr7:9038065-9038084 | MsG0780036508.01.T01:CDS | 35.0% | |
| GAGAGATAGTAAACTTTGGT+GGG | + | Chr7:9037799-9037818 | MsG0780036508.01.T01:CDS | 35.0% | |
| GATAGAAGCTTAACATGAAG+AGG | - | Chr7:9036876-9036895 | None:intergenic | 35.0% | |
| GGAGTGACTGAATATGAAAA+TGG | + | Chr7:9037554-9037573 | MsG0780036508.01.T01:CDS | 35.0% | |
| GGTTGAATGGAACTTTCAAA+GGG | + | Chr7:9037243-9037262 | MsG0780036508.01.T01:CDS | 35.0% | |
| TATCGGAGATTCATGGATAT+TGG | + | Chr7:9036971-9036990 | MsG0780036508.01.T01:CDS | 35.0% | |
| TGGTTGAATGGAACTTTCAA+AGG | + | Chr7:9037242-9037261 | MsG0780036508.01.T01:CDS | 35.0% | |
| TTCACAAGTGCATAAGTTTG+AGG | - | Chr7:9037446-9037465 | None:intergenic | 35.0% | |
| TTGAAAGTTCCATTCAACCA+TGG | - | Chr7:9037242-9037261 | None:intergenic | 35.0% | |
| ! | ATTTTATGAACTTGGGCCAA+AGG | + | Chr7:9037468-9037487 | MsG0780036508.01.T01:CDS | 35.0% |
| ! | CAACAAGGTGTTAATGATTC+AGG | + | Chr7:9037308-9037327 | MsG0780036508.01.T01:CDS | 35.0% |
| ! | TTTTATGAACTTGGGCCAAA+GGG | + | Chr7:9037469-9037488 | MsG0780036508.01.T01:CDS | 35.0% |
| !!! | TCAGGTGTTGATTTTGGTTT+TGG | + | Chr7:9037326-9037345 | MsG0780036508.01.T01:CDS | 35.0% |
| ACTATTGAGCCATGGTTGAA+TGG | + | Chr7:9037230-9037249 | MsG0780036508.01.T01:CDS | 40.0% | |
| AGATTGTTTCAAGAGCTGCA+AGG | + | Chr7:9037138-9037157 | MsG0780036508.01.T01:CDS | 40.0% | |
| CTCTATGAAAAAAAGTGGGG+TGG | + | Chr7:9037275-9037294 | MsG0780036508.01.T01:CDS | 40.0% | |
| GACTCAGTTATAGGCAACAA+AGG | - | Chr7:9037869-9037888 | None:intergenic | 40.0% | |
| GGGTTTATCTATGCTTTGCA+AGG | + | Chr7:9037977-9037996 | MsG0780036508.01.T01:CDS | 40.0% | |
| TCAATGCTACACAAACTTGG+TGG | + | Chr7:9037696-9037715 | MsG0780036508.01.T01:CDS | 40.0% | |
| TGAAGGAAACTATTGAGCCA+TGG | + | Chr7:9037222-9037241 | MsG0780036508.01.T01:CDS | 40.0% | |
| TGTTTATGCTAAGGAGCTTG+TGG | + | Chr7:9037904-9037923 | MsG0780036508.01.T01:CDS | 40.0% | |
| ! | GCATTGATAGGTCTAGCATA+TGG | + | Chr7:9037626-9037645 | MsG0780036508.01.T01:CDS | 40.0% |
| ! | TAGGCAACAAAGGCATAACT+TGG | - | Chr7:9037859-9037878 | None:intergenic | 40.0% |
| ! | TTCTGAATGTAGAGGGTGTA+GGG | + | Chr7:9037826-9037845 | MsG0780036508.01.T01:CDS | 40.0% |
| !! | AGTATTGATGGTGATCTCGT+TGG | + | Chr7:9036945-9036964 | MsG0780036508.01.T01:CDS | 40.0% |
| !! | GGTGGATTAGTTACTCAACA+AGG | + | Chr7:9037293-9037312 | MsG0780036508.01.T01:CDS | 40.0% |
| !! | TTGGTGTTATCGGAGATTCA+TGG | + | Chr7:9036964-9036983 | MsG0780036508.01.T01:CDS | 40.0% |
| ATGCTAAGGAGCTTGTGGAA+TGG | + | Chr7:9037909-9037928 | MsG0780036508.01.T01:CDS | 45.0% | |
| ATGTTTGCATCACCAGAGAC+AGG | - | Chr7:9036783-9036802 | None:intergenic | 45.0% | |
| CTACACCCTCTACATTCAGA+AGG | - | Chr7:9037827-9037846 | None:intergenic | 45.0% | |
| TGTTTGCATCACCAGAGACA+GGG | - | Chr7:9036782-9036801 | None:intergenic | 45.0% | |
| ! | CTTCTGAATGTAGAGGGTGT+AGG | + | Chr7:9037825-9037844 | MsG0780036508.01.T01:CDS | 45.0% |
| !! | GGTGATCTCGTTGGTGTTAT+CGG | + | Chr7:9036954-9036973 | MsG0780036508.01.T01:CDS | 45.0% |
| AAGTTGCATTCTTGGGCTGC+AGG | + | Chr7:9037533-9037552 | MsG0780036508.01.T01:CDS | 50.0% | |
| GGGCTCCTTCTGAATGTAGA+GGG | + | Chr7:9037819-9037838 | MsG0780036508.01.T01:CDS | 50.0% | |
| TGGGCTCCTTCTGAATGTAG+AGG | + | Chr7:9037818-9037837 | MsG0780036508.01.T01:CDS | 50.0% | |
| ! | AGCACTTGTTACCCTGTCTC+TGG | + | Chr7:9036768-9036787 | MsG0780036508.01.T01:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 9036690 | 9038102 | 9036690 | ID=MsG0780036508.01;Name=MsG0780036508.01 |
| Chr7 | mRNA | 9036690 | 9038102 | 9036690 | ID=MsG0780036508.01.T01;Parent=MsG0780036508.01;Name=MsG0780036508.01.T01;_AED=0.18;_eAED=0.18;_QI=0|-1|0|1|-1|1|1|0|470 |
| Chr7 | exon | 9036690 | 9038102 | 9036690 | ID=MsG0780036508.01.T01:exon:1415;Parent=MsG0780036508.01.T01 |
| Chr7 | CDS | 9036690 | 9038102 | 9036690 | ID=MsG0780036508.01.T01:cds;Parent=MsG0780036508.01.T01 |
| Gene Sequence |
| Protein sequence |
