AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037354.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037354.01.T01 MTR_6g038020 87.715 407 15 1 1 372 16 422 0.0 728
MsG0780037354.01.T01 MTR_6g038020 87.715 407 15 1 1 372 13 419 0.0 728
MsG0780037354.01.T01 MTR_1g098390 73.350 409 68 5 1 372 15 419 0.0 612
MsG0780037354.01.T01 MTR_6g033315 50.125 399 143 9 1 357 30 414 8.20e-128 374
MsG0780037354.01.T01 MTR_7g083480 50.754 398 138 8 1 357 30 410 1.52e-117 348
MsG0780037354.01.T01 MTR_3g098840 45.038 393 151 7 2 356 32 397 1.48e-110 330
MsG0780037354.01.T01 MTR_7g088360 45.634 355 143 7 1 315 39 383 8.61e-100 302
MsG0780037354.01.T01 MTR_7g088350 48.123 293 107 3 1 254 35 321 1.00e-94 290
MsG0780037354.01.T01 MTR_7g114080 32.500 200 97 6 29 216 124 297 6.25e-20 90.5
MsG0780037354.01.T01 MTR_1g094610 33.508 191 86 6 29 213 59 214 6.31e-20 89.0
MsG0780037354.01.T01 MTR_4g023760 27.668 253 148 9 16 259 57 283 1.37e-19 88.6
MsG0780037354.01.T01 MTR_5g023230 29.104 268 152 8 2 238 36 296 2.23e-19 88.2
MsG0780037354.01.T01 MTR_5g023230 29.104 268 152 8 2 238 56 316 2.65e-19 88.2
MsG0780037354.01.T01 MTR_4g021795 30.734 218 118 8 2 213 37 227 7.96e-19 86.3
MsG0780037354.01.T01 MTR_7g114080 28.708 209 102 5 29 216 124 306 1.09e-18 87.0
MsG0780037354.01.T01 MTR_4g116160 34.746 118 63 3 22 139 322 425 8.54e-17 82.4
MsG0780037354.01.T01 MTR_7g114080 28.922 204 98 5 29 211 124 301 9.52e-17 80.5
MsG0780037354.01.T01 MTR_4g116160 34.746 118 63 3 22 139 149 252 1.67e-16 81.3
MsG0780037354.01.T01 MTR_4g116160 34.746 118 63 3 22 139 322 425 2.16e-16 80.9
MsG0780037354.01.T01 MTR_7g118050 29.596 223 116 8 33 239 77 274 4.48e-16 78.6
MsG0780037354.01.T01 MTR_4g092760 31.579 152 79 4 2 144 282 417 6.29e-16 79.7
MsG0780037354.01.T01 MTR_5g023230 30.233 172 96 5 2 149 56 227 9.47e-16 76.6
MsG0780037354.01.T01 MTR_7g114080 37.190 121 49 3 29 148 124 218 1.72e-15 77.0
MsG0780037354.01.T01 MTR_4g092760 29.801 151 82 4 2 144 194 328 1.15e-14 75.5
MsG0780037354.01.T01 MTR_7g118050 34.286 105 52 2 33 133 77 168 1.21e-13 70.1
MsG0780037354.01.T01 MTR_1g112830 32.895 152 85 6 90 231 461 605 3.61e-13 71.2
MsG0780037354.01.T01 MTR_4g082560 30.534 131 81 2 91 211 180 310 1.32e-12 69.3
MsG0780037354.01.T01 MTR_1g085980 30.075 133 83 3 89 211 155 287 3.27e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037354.01.T01 AT5G50020 61.071 411 109 6 1 372 14 412 1.90e-173 489
MsG0780037354.01.T01 AT5G50020 61.071 411 109 6 1 372 44 442 4.91e-173 489
MsG0780037354.01.T01 AT4G24630 60.145 414 98 9 1 371 14 403 2.93e-170 481
MsG0780037354.01.T01 AT5G50020 59.611 411 108 7 1 372 14 405 1.50e-165 469
MsG0780037354.01.T01 AT3G26935 48.756 402 144 9 2 357 30 415 3.92e-125 368
MsG0780037354.01.T01 AT3G48760 42.929 396 175 6 2 355 39 425 1.88e-108 326
MsG0780037354.01.T01 AT5G41060 44.924 394 164 8 2 359 15 391 7.59e-107 319
MsG0780037354.01.T01 AT5G41060 44.924 394 164 8 2 359 30 406 2.81e-106 318
MsG0780037354.01.T01 AT5G41060 47.674 344 161 7 16 357 11 337 2.52e-103 308
MsG0780037354.01.T01 AT5G41060 47.674 344 161 7 16 357 11 337 2.52e-103 308
MsG0780037354.01.T01 AT3G56930 51.712 292 102 4 1 254 20 310 3.02e-101 308
MsG0780037354.01.T01 AT5G05070 45.509 334 137 5 1 299 47 370 1.61e-92 283
MsG0780037354.01.T01 AT2G40990 46.273 322 130 5 1 287 38 351 4.93e-88 272
MsG0780037354.01.T01 AT3G56920 48.780 287 110 2 1 254 20 302 4.57e-86 264
MsG0780037354.01.T01 AT3G56930 44.674 291 88 3 1 254 20 274 3.99e-81 255
MsG0780037354.01.T01 AT3G04970 32.735 223 104 5 20 222 29 225 4.59e-21 92.8
MsG0780037354.01.T01 AT3G04970 32.735 223 104 5 20 222 116 312 5.69e-20 90.9
MsG0780037354.01.T01 AT3G60800 29.130 230 137 7 14 236 60 270 6.30e-19 86.7
MsG0780037354.01.T01 AT3G51390 29.508 244 136 5 22 237 73 308 8.08e-18 84.0
MsG0780037354.01.T01 AT3G51390 30.126 239 136 5 22 237 73 303 2.23e-17 82.8
MsG0780037354.01.T01 AT2G14255 28.440 218 128 7 26 231 314 515 2.64e-17 84.0
MsG0780037354.01.T01 AT3G04970 33.019 212 96 5 20 211 116 301 4.75e-17 81.6
MsG0780037354.01.T01 AT3G09320 30.899 178 92 5 38 211 66 216 1.48e-16 79.7
MsG0780037354.01.T01 AT5G20350 28.807 243 141 7 29 258 324 547 7.53e-16 79.3
MsG0780037354.01.T01 AT4G22750 28.287 251 133 10 4 236 39 260 1.62e-15 77.0
MsG0780037354.01.T01 AT5G04270 34.146 123 75 2 92 213 94 211 8.12e-15 74.3
MsG0780037354.01.T01 AT1G69420 32.824 131 78 3 91 211 164 294 1.09e-14 75.9
MsG0780037354.01.T01 AT1G69420 32.824 131 78 3 91 211 164 294 1.09e-14 75.9
MsG0780037354.01.T01 AT4G00840 28.750 240 128 11 14 239 48 258 1.82e-14 73.6
MsG0780037354.01.T01 AT4G00840 33.600 125 60 5 14 133 48 154 3.32e-14 71.6
MsG0780037354.01.T01 AT3G22180 27.481 131 85 3 91 211 173 303 4.18e-11 65.1

Find 107 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTTTCATTTGTTCCTTAT+TGG 0.175080 7:-24141099 MsG0780037354.01.T01:CDS
CAACTTGAGTGCCTTTCTTC+TGG 0.216872 7:+24140126 None:intergenic
TTTGGAGGAAGACTGATATT+TGG 0.232270 7:-24143454 MsG0780037354.01.T01:CDS
CTTATGCAGAAATTCCTATT+TGG 0.242865 7:-24143472 None:intergenic
TGGTTTGTTGGTGGACTAAC+TGG 0.249837 7:-24141120 MsG0780037354.01.T01:CDS
CATATCAACTTTAGGTGATA+TGG 0.265222 7:-24139986 MsG0780037354.01.T01:three_prime_UTR
ATCTGAAGGTGATTCAGTTT+TGG 0.267398 7:-24140178 MsG0780037354.01.T01:CDS
CTTCTTTATGTTTGTTTCTT+CGG 0.274672 7:-24141286 MsG0780037354.01.T01:CDS
CTACATCTTGTTCAGGTTCC+CGG 0.296038 7:+24140337 None:intergenic
TCACAATACTTCACTCTTAC+AGG 0.310041 7:+24141566 None:intergenic
CCTTACTTCGGCACGCGATC+CGG 0.316174 7:-24141723 MsG0780037354.01.T01:CDS
TTGTGTAGCATATCAACTTT+AGG 0.336045 7:-24139994 MsG0780037354.01.T01:three_prime_UTR
TTGGAGGAAGACTGATATTT+GGG 0.337492 7:-24143453 MsG0780037354.01.T01:CDS
CTTTCTTCTGGTTGAACTGT+TGG 0.346145 7:+24140138 None:intergenic
GCCCGAAAATTGTTCCTTGA+AGG 0.354528 7:+24140408 None:intergenic
TTCATCTCTTTGTGGTTTGT+TGG 0.359365 7:-24141132 MsG0780037354.01.T01:CDS
CGTCCGTCTCTATTGACATT+GGG 0.359479 7:-24141649 MsG0780037354.01.T01:CDS
CATATTGTTTCATCTCTTTG+TGG 0.364300 7:-24141140 MsG0780037354.01.T01:CDS
CCCTGCATCTGTCGTACTAA+TGG 0.366662 7:-24141163 MsG0780037354.01.T01:CDS
ATTGCTTATCAGTTTGTTGC+TGG 0.369614 7:-24143416 MsG0780037354.01.T01:CDS
TTTGTTGCTGGTCATAGTTC+CGG 0.370556 7:-24143404 MsG0780037354.01.T01:intron
AGTTTCAGTTACATTTGAAT+TGG 0.378536 7:+24140062 None:intergenic
GGACCTGGTTTGTGCCAATA+AGG 0.382903 7:+24141085 None:intergenic
TTCAACACAATTGTTGCAAA+TGG 0.388663 7:+24141502 None:intergenic
GTACAAAAGTGAAGCCTTCA+AGG 0.396146 7:-24140422 MsG0780037354.01.T01:CDS
ATCTCTTTGTGGTTTGTTGG+TGG 0.397741 7:-24141129 MsG0780037354.01.T01:CDS
TTTGAATTGGCAAGTACATC+TGG 0.401633 7:+24140075 None:intergenic
CTTACTTCGGCACGCGATCC+GGG 0.404000 7:-24141722 MsG0780037354.01.T01:CDS
ATATCAGTCTTCCTCCAAAT+AGG 0.409658 7:+24143458 None:intergenic
CCTTCAGATGCATTGTTGTA+AGG 0.410086 7:+24140192 None:intergenic
TTCGATACAGAGCAGATAAC+AGG 0.416428 7:-24140494 MsG0780037354.01.T01:CDS
AGGTGGAGATCCTCGTTCTA+AGG 0.423979 7:-24140316 MsG0780037354.01.T01:CDS
TCTCCACCTACATCTTGTTC+AGG 0.425629 7:+24140330 None:intergenic
ATATCAACTTTAGGTGATAT+GGG 0.433238 7:-24139985 MsG0780037354.01.T01:three_prime_UTR
GGTACAGAGGCCACCTCCTC+GGG 0.434926 7:-24140370 MsG0780037354.01.T01:CDS
GCCATTAGTACGACAGATGC+AGG 0.435180 7:+24141162 None:intergenic
GCCGCTGTGATATCTTTAAT+AGG 0.440693 7:+24140265 None:intergenic
CCTTGGGTTGGCCAATGCAT+TGG 0.441941 7:-24141461 MsG0780037354.01.T01:CDS
TTCAATTCACATTCCTATAA+CGG 0.442233 7:+24139906 None:intergenic
CCGGATCGCGTGCCGAAGTA+AGG 0.458848 7:+24141723 None:intergenic
ACAGGATCAACGTTTACAAT+CGG 0.465224 7:-24140476 MsG0780037354.01.T01:CDS
CCTTCAGTTCCCTCGAACAA+AGG 0.478663 7:-24141609 MsG0780037354.01.T01:CDS
TACATCTTGTTCAGGTTCCC+GGG 0.479289 7:+24140338 None:intergenic
ACCATTACTTCCTTTGTTCG+AGG 0.482164 7:+24141599 None:intergenic
GATCATCATTGCCCTTGGGT+TGG 0.488027 7:-24141473 MsG0780037354.01.T01:CDS
ATGCAGAAATTCCTATTTGG+AGG 0.488393 7:-24143469 None:intergenic
CAGGATCAACGTTTACAATC+GGG 0.494216 7:-24140475 MsG0780037354.01.T01:CDS
AAGAAATCGATGAAGACATA+AGG 0.494412 7:-24140233 MsG0780037354.01.T01:CDS
CAGAAGAAAGGCACTCAAGT+TGG 0.497950 7:-24140125 MsG0780037354.01.T01:CDS
ATAAGCAATGACTTAGCATC+AGG 0.501978 7:+24143430 None:intergenic
GTTGGAGAAGAAGTGGAAGC+TGG 0.503264 7:-24140107 MsG0780037354.01.T01:CDS
GTTCGAGGGAACTGAAGGCT+TGG 0.508442 7:+24141614 None:intergenic
GTCGTAACTACCCGAGGAGG+TGG 0.512624 7:+24140360 None:intergenic
CCCTCGAACAAAGGAAGTAA+TGG 0.513322 7:-24141600 MsG0780037354.01.T01:CDS
CAACAGTTCAACCAGAAGAA+AGG 0.521335 7:-24140137 MsG0780037354.01.T01:CDS
GCGATCCGGGGATTATTCCT+AGG 0.521460 7:-24141709 MsG0780037354.01.T01:CDS
CCATTACTTCCTTTGTTCGA+GGG 0.521670 7:+24141600 None:intergenic
CACTCAAGTTGGAGAAGAAG+TGG 0.521803 7:-24140114 MsG0780037354.01.T01:CDS
AGGTACAGAGGCCACCTCCT+CGG 0.525137 7:-24140371 MsG0780037354.01.T01:CDS
CCTTTGTTCGAGGGAACTGA+AGG 0.526335 7:+24141609 None:intergenic
TCAGGCGGATGTAAATTCCT+AGG 0.534198 7:+24141692 None:intergenic
TTTCTGCGCGTCAATGATTG+CGG 0.546853 7:-24140029 MsG0780037354.01.T01:exon
TAGAGACGGACGAGTCATAA+CGG 0.547925 7:+24141660 None:intergenic
GATACTTCTCTTCCTTACTT+CGG 0.548948 7:-24141735 MsG0780037354.01.T01:CDS
TCATAACGGAACTCTTCCTC+AGG 0.549857 7:+24141674 None:intergenic
ACAAAGGAAGTAATGGTCAA+TGG 0.552312 7:-24141593 MsG0780037354.01.T01:CDS
GTCCGTCTCTATTGACATTG+GGG 0.552406 7:-24141648 MsG0780037354.01.T01:CDS
ATAAGGAGCAGAGGGAGCAA+TGG 0.552579 7:-24140216 MsG0780037354.01.T01:CDS
GTTCCTTATTGGCACAAACC+AGG 0.553192 7:-24141088 MsG0780037354.01.T01:intron
ACCATACCAGTCCAATGCAT+TGG 0.559731 7:+24141450 None:intergenic
TCGTCCGTCTCTATTGACAT+TGG 0.564872 7:-24141650 MsG0780037354.01.T01:CDS
GGTTGGCCAATGCATTGGAC+TGG 0.569149 7:-24141456 MsG0780037354.01.T01:intron
TTACTTCGGCACGCGATCCG+GGG 0.569641 7:-24141721 MsG0780037354.01.T01:CDS
CCATTAGTACGACAGATGCA+GGG 0.573677 7:+24141163 None:intergenic
ATGAAGACATAAGGAGCAGA+GGG 0.578659 7:-24140224 MsG0780037354.01.T01:CDS
TTGGAGAAGAAGTGGAAGCT+GGG 0.581901 7:-24140106 MsG0780037354.01.T01:CDS
CGGGAACCTGAACAAGATGT+AGG 0.585685 7:-24140336 MsG0780037354.01.T01:CDS
GAATCATGGGACAGTGTGGA+AGG 0.586507 7:-24141199 MsG0780037354.01.T01:CDS
CTCCTCGGGTAGTTACGACC+CGG 0.590695 7:-24140356 MsG0780037354.01.T01:CDS
CCAATGCATTGGCCAACCCA+AGG 0.591299 7:+24141461 None:intergenic
AAACAAACATAAAGAAGTAA+CGG 0.600646 7:+24141292 None:intergenic
TATCAACTTTAGGTGATATG+GGG 0.601199 7:-24139984 MsG0780037354.01.T01:three_prime_UTR
TAGTTCAAGAGGAGGTACAG+AGG 0.620300 7:-24140383 MsG0780037354.01.T01:CDS
TCGGGCTTTAGTTCAAGAGG+AGG 0.620300 7:-24140391 MsG0780037354.01.T01:CDS
CCTTACAACAATGCATCTGA+AGG 0.623908 7:-24140192 MsG0780037354.01.T01:CDS
CAATGCATTGGCCAACCCAA+GGG 0.627990 7:+24141462 None:intergenic
AATGTGAATTGAATTGATTG+AGG 0.632585 7:-24139896 MsG0780037354.01.T01:three_prime_UTR
GATGAAGACATAAGGAGCAG+AGG 0.632991 7:-24140225 MsG0780037354.01.T01:CDS
CATTAGTACGACAGATGCAG+GGG 0.633138 7:+24141164 None:intergenic
TAGGAATTTACATCCGCCTG+AGG 0.634847 7:-24141690 MsG0780037354.01.T01:CDS
AGGATCAACGTTTACAATCG+GGG 0.637031 7:-24140474 MsG0780037354.01.T01:CDS
TCCCGGGTCGTAACTACCCG+AGG 0.641381 7:+24140354 None:intergenic
GAACCTGAACAAGATGTAGG+TGG 0.652691 7:-24140333 MsG0780037354.01.T01:CDS
TAACGGAACTCTTCCTCAGG+CGG 0.652862 7:+24141677 None:intergenic
TCCTCGGGTAGTTACGACCC+GGG 0.655810 7:-24140355 MsG0780037354.01.T01:CDS
TCCGTCTCTATTGACATTGG+GGG 0.659307 7:-24141647 MsG0780037354.01.T01:CDS
AATACTTCACTCTTACAGGA+AGG 0.661663 7:+24141570 None:intergenic
GTTGAAGATGATCTAGACAT+CGG 0.663613 7:-24140294 MsG0780037354.01.T01:CDS
TATTAAAGATATCACAGCGG+CGG 0.684396 7:-24140263 MsG0780037354.01.T01:CDS
GGATCAACGTTTACAATCGG+GGG 0.689608 7:-24140473 MsG0780037354.01.T01:CDS
AAATTCCTAGGAATAATCCC+CGG 0.693755 7:+24141704 None:intergenic
ATGAGAATCATGGGACAGTG+TGG 0.702879 7:-24141203 MsG0780037354.01.T01:CDS
CGGGTCGTAACTACCCGAGG+AGG 0.713596 7:+24140357 None:intergenic
TCATCTTCAACCTTAGAACG+AGG 0.715308 7:+24140306 None:intergenic
GAGCAATGTGAACAACGAGG+AGG 0.741699 7:+24141524 None:intergenic
ACCTATTAAAGATATCACAG+CGG 0.778844 7:-24140266 MsG0780037354.01.T01:CDS
ATGGAGCAATGTGAACAACG+AGG 0.830280 7:+24141521 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATCAAAAAGATTGAAT+AGG - Chr7:24143386-24143405 MsG0780037354.01.T01:intron 15.0%
!! ATCAATATATTGTATCATAA+AGG - Chr7:24140842-24140861 MsG0780037354.01.T01:intron 15.0%
!! AAACAAACATAAAGAAGTAA+CGG + Chr7:24142049-24142068 None:intergenic 20.0%
!! AAAGAATTAATAAAACGATC+TGG + Chr7:24140999-24141018 None:intergenic 20.0%
!! ATTGAAAACAATTCTTATGA+TGG - Chr7:24142386-24142405 MsG0780037354.01.T01:intron 20.0%
!! CAATGAGATAAACATTATAT+TGG + Chr7:24142304-24142323 None:intergenic 20.0%
!! GATTATAAAATCACAAACTT+GGG - Chr7:24141282-24141301 MsG0780037354.01.T01:CDS 20.0%
!! TGATTATAAAATCACAAACT+TGG - Chr7:24141281-24141300 MsG0780037354.01.T01:CDS 20.0%
!! TTGATTGTGATACTTATTAT+TGG + Chr7:24141151-24141170 None:intergenic 20.0%
!! TTTGAATGTGGTAAAAAATT+AGG - Chr7:24142476-24142495 MsG0780037354.01.T01:intron 20.0%
!!! ACTATTTGGTGAAAAATTTT+TGG - Chr7:24141088-24141107 MsG0780037354.01.T01:intron 20.0%
!!! ACTTTTATACAATGTTGAAA+GGG - Chr7:24140656-24140675 MsG0780037354.01.T01:intron 20.0%
!!! ATAAGAATTGTTTTCAATAG+TGG + Chr7:24142384-24142403 None:intergenic 20.0%
!!! ATGTTTGTTAGCATTTATTT+TGG - Chr7:24140137-24140156 MsG0780037354.01.T01:CDS 20.0%
!!! CATGTCTTTTCTATAAAATT+TGG + Chr7:24142686-24142705 None:intergenic 20.0%
!!! TATTGATTTTGAAAGAAGAA+TGG - Chr7:24141342-24141361 MsG0780037354.01.T01:intron 20.0%
!!! TTTTCTAATTTACGAAAGTA+AGG - Chr7:24141448-24141467 MsG0780037354.01.T01:intron 20.0%
! AATACACAAAAGATGATAAC+CGG + Chr7:24139956-24139975 None:intergenic 25.0%
! AATGTCTATTAAAAGATCAC+TGG + Chr7:24141233-24141252 None:intergenic 25.0%
! AATGTGAATTGAATTGATTG+AGG - Chr7:24143442-24143461 MsG0780037354.01.T01:CDS 25.0%
! AGAAATGTGAAAGAAATTCA+CGG + Chr7:24142277-24142296 None:intergenic 25.0%
! AGGCAAAATTACATAAGAAA+GGG - Chr7:24140533-24140552 MsG0780037354.01.T01:intron 25.0%
! AGTTTCAGTTACATTTGAAT+TGG + Chr7:24143279-24143298 None:intergenic 25.0%
! ATAAGTATCACAATCAATAG+TGG - Chr7:24141154-24141173 MsG0780037354.01.T01:CDS 25.0%
! ATATCAACTTTAGGTGATAT+GGG - Chr7:24143353-24143372 MsG0780037354.01.T01:intron 25.0%
! ATGTCTATTAAAAGATCACT+GGG + Chr7:24141232-24141251 None:intergenic 25.0%
! ATTGGAAAGATCTTCAAATT+AGG + Chr7:24141133-24141152 None:intergenic 25.0%
! CACCTATAAACAAAAATCAT+GGG + Chr7:24141581-24141600 None:intergenic 25.0%
! CTTTCAACATTGTATAAAAG+TGG + Chr7:24140657-24140676 None:intergenic 25.0%
! TCATAAAATCAATAACATCG+TGG + Chr7:24141923-24141942 None:intergenic 25.0%
! TTAATTTAACCGACATTCTT+AGG - Chr7:24141501-24141520 MsG0780037354.01.T01:CDS 25.0%
! TTCAATTCACATTCCTATAA+CGG + Chr7:24143435-24143454 None:intergenic 25.0%
!! AAGAATGTCGGTTAAATTAA+AGG + Chr7:24141501-24141520 None:intergenic 25.0%
!! AATTTACGAAAGTAAGGTTT+TGG - Chr7:24141454-24141473 MsG0780037354.01.T01:intron 25.0%
!! CACTTTTATACAATGTTGAA+AGG - Chr7:24140655-24140674 MsG0780037354.01.T01:intron 25.0%
!! CTTCTTTATGTTTGTTTCTT+CGG - Chr7:24142052-24142071 MsG0780037354.01.T01:intron 25.0%
!!! ATACTTGATGTTTTTGAATG+TGG - Chr7:24142464-24142483 MsG0780037354.01.T01:intron 25.0%
!!! ATCCCATGATTTTTGTTTAT+AGG - Chr7:24141576-24141595 MsG0780037354.01.T01:CDS 25.0%
!!! TATTAACATTTAGCTTGAGA+GGG + Chr7:24140187-24140206 None:intergenic 25.0%
!!! TTATTAACATTTAGCTTGAG+AGG + Chr7:24140188-24140207 None:intergenic 25.0%
!!! TTTTTACATCAAGGTTTTGA+TGG - Chr7:24142112-24142131 MsG0780037354.01.T01:intron 25.0%
AAACAGTGTCAATAACTCAT+AGG - Chr7:24140292-24140311 MsG0780037354.01.T01:CDS 30.0%
AACAAAGGAGAGAAATTGTT+AGG - Chr7:24140681-24140700 MsG0780037354.01.T01:intron 30.0%
AAGAAATCGATGAAGACATA+AGG - Chr7:24143105-24143124 MsG0780037354.01.T01:intron 30.0%
AAGCAAAAATGTAATGAACC+AGG + Chr7:24141971-24141990 None:intergenic 30.0%
AATCAAATTGTTCCCTTCAT+TGG + Chr7:24141266-24141285 None:intergenic 30.0%
AATTAGGCTTACACTATCTT+TGG + Chr7:24142635-24142654 None:intergenic 30.0%
ACCTAACAAATGATGCTTTA+TGG - Chr7:24142579-24142598 MsG0780037354.01.T01:intron 30.0%
ACCTATTAAAGATATCACAG+CGG - Chr7:24143072-24143091 MsG0780037354.01.T01:intron 30.0%
AGCTAAAACTATTAAGGTCT+TGG - Chr7:24140247-24140266 MsG0780037354.01.T01:CDS 30.0%
ATAGATATTGCTGCCTAAAA+AGG - Chr7:24140490-24140509 MsG0780037354.01.T01:CDS 30.0%
ATTTACTTGTGATCCAATGA+AGG - Chr7:24141250-24141269 MsG0780037354.01.T01:CDS 30.0%
CAAGCCAGTAATATCATATA+AGG + Chr7:24142724-24142743 None:intergenic 30.0%
CAGGCAAAATTACATAAGAA+AGG - Chr7:24140532-24140551 MsG0780037354.01.T01:intron 30.0%
CATATCAACTTTAGGTGATA+TGG - Chr7:24143352-24143371 MsG0780037354.01.T01:intron 30.0%
CATATTGTTTCATCTCTTTG+TGG - Chr7:24142198-24142217 MsG0780037354.01.T01:intron 30.0%
CATTATTAAACCTGATTCAG+TGG - Chr7:24140452-24140471 MsG0780037354.01.T01:CDS 30.0%
CGATGAAACAAAATATTGAG+AGG + Chr7:24141034-24141053 None:intergenic 30.0%
CGTACCTTATATGATATTAC+TGG - Chr7:24142717-24142736 MsG0780037354.01.T01:intron 30.0%
CTATATTCATGACTAGTACT+TGG - Chr7:24140927-24140946 MsG0780037354.01.T01:intron 30.0%
CTCACAAGCTAAAACTATTA+AGG - Chr7:24140241-24140260 MsG0780037354.01.T01:CDS 30.0%
GAATTTATTCCCCTTACAAA+CGG + Chr7:24140567-24140586 None:intergenic 30.0%
GCAAAAAGCAGCAAAATATA+AGG - Chr7:24140339-24140358 MsG0780037354.01.T01:CDS 30.0%
GCACCTATAAACAAAAATCA+TGG + Chr7:24141582-24141601 None:intergenic 30.0%
GCTAAAACTATTAAGGTCTT+GGG - Chr7:24140248-24140267 MsG0780037354.01.T01:CDS 30.0%
GGAAATCATATAACCAAAAC+AGG + Chr7:24141480-24141499 None:intergenic 30.0%
GGATTTAAGAAAGAGTAACT+TGG + Chr7:24141211-24141230 None:intergenic 30.0%
GGCAGCAATATCTATATATA+TGG + Chr7:24140485-24140504 None:intergenic 30.0%
TATCAACTTTAGGTGATATG+GGG - Chr7:24143354-24143373 MsG0780037354.01.T01:intron 30.0%
TATGAGTTATTGACACTGTT+TGG + Chr7:24140293-24140312 None:intergenic 30.0%
TCAACGAGAAGAAAACTATT+TGG - Chr7:24141074-24141093 MsG0780037354.01.T01:intron 30.0%
TCCTGCATTATGAAGAAAAA+TGG + Chr7:24140000-24140019 None:intergenic 30.0%
TCTTCTCGTTGAAAGTTAAT+TGG + Chr7:24141066-24141085 None:intergenic 30.0%
TTCAACACAATTGTTGCAAA+TGG + Chr7:24141839-24141858 None:intergenic 30.0%
TTGTGTAGCATATCAACTTT+AGG - Chr7:24143344-24143363 MsG0780037354.01.T01:intron 30.0%
TTTACTTGTGATCCAATGAA+GGG - Chr7:24141251-24141270 MsG0780037354.01.T01:CDS 30.0%
! AATCTCAGCTTTTTACATCA+AGG - Chr7:24142103-24142122 MsG0780037354.01.T01:intron 30.0%
! ACCATAAAGCATCATTTGTT+AGG + Chr7:24142583-24142602 None:intergenic 30.0%
! AGCATCATTTGTTAGGTAAA+AGG + Chr7:24142576-24142595 None:intergenic 30.0%
! ATGGACAAAATGATGATGTA+AGG - Chr7:24142430-24142449 MsG0780037354.01.T01:intron 30.0%
! CTTATATGATATTACTGGCT+TGG - Chr7:24142722-24142741 MsG0780037354.01.T01:intron 30.0%
! TATCACAATCAATAGTGGAA+TGG - Chr7:24141159-24141178 MsG0780037354.01.T01:CDS 30.0%
! TCTGTATCGAAAGTTTTCAT+AGG + Chr7:24142835-24142854 None:intergenic 30.0%
! TGAGATTTTCCTAAGAATGT+CGG + Chr7:24141513-24141532 None:intergenic 30.0%
! TGATCAGATTTTACCGTTAT+AGG - Chr7:24143419-24143438 MsG0780037354.01.T01:CDS 30.0%
!! ACCATTTTTCTTCATAATGC+AGG - Chr7:24139996-24140015 MsG0780037354.01.T01:three_prime_UTR 30.0%
!! GAAGAGCATCTTTATTATCT+TGG - Chr7:24142784-24142803 MsG0780037354.01.T01:intron 30.0%
!! GGGGTGTTTAAATAATTTTC+TGG - Chr7:24142884-24142903 MsG0780037354.01.T01:intron 30.0%
!! TAATGCAGGATATGCTATTT+TGG - Chr7:24140010-24140029 MsG0780037354.01.T01:three_prime_UTR 30.0%
!! TTGCTTTTATATGGCCTATT+TGG + Chr7:24140323-24140342 None:intergenic 30.0%
!! TTTTGATGGATGAGAATCAT+GGG - Chr7:24142126-24142145 MsG0780037354.01.T01:intron 30.0%
!!! CTTAATAGTTTTAGCTTGTG+AGG + Chr7:24140243-24140262 None:intergenic 30.0%
!!! TGCTGCTTTTTGCTTTTATA+TGG + Chr7:24140332-24140351 None:intergenic 30.0%
AAATTCCTAGGAATAATCCC+CGG + Chr7:24141637-24141656 None:intergenic 35.0%
AACTCTACAGCAGAAAAACA+TGG - Chr7:24140610-24140629 MsG0780037354.01.T01:intron 35.0%
AATACTTCACTCTTACAGGA+AGG + Chr7:24141771-24141790 None:intergenic 35.0%
AATGTTGAAAGGGAGAACAA+AGG - Chr7:24140666-24140685 MsG0780037354.01.T01:intron 35.0%
AATTCTTGACTATGACCACA+AGG - Chr7:24140582-24140601 MsG0780037354.01.T01:intron 35.0%
ACAAAGGAAGTAATGGTCAA+TGG - Chr7:24141745-24141764 MsG0780037354.01.T01:intron 35.0%
ACAGCAGAAAAACATGGATT+TGG - Chr7:24140616-24140635 MsG0780037354.01.T01:intron 35.0%
ACAGGATCAACGTTTACAAT+CGG - Chr7:24142862-24142881 MsG0780037354.01.T01:intron 35.0%
ACTCATAGGAATGTCCAAAT+AGG - Chr7:24140306-24140325 MsG0780037354.01.T01:CDS 35.0%
AGGTAAAAGGAAATGTCTGA+GGG + Chr7:24142563-24142582 None:intergenic 35.0%
AGTTATTGACACTGTTTGGA+AGG + Chr7:24140289-24140308 None:intergenic 35.0%
ATAAGCAATGACTTAGCATC+AGG + Chr7:24139911-24139930 None:intergenic 35.0%
ATATCAGTCTTCCTCCAAAT+AGG + Chr7:24139883-24139902 None:intergenic 35.0%
ATATTGCTGCCTAAAAAGGT+TGG - Chr7:24140494-24140513 MsG0780037354.01.T01:CDS 35.0%
ATTAAACCTGATTCAGTGGT+GGG - Chr7:24140456-24140475 MsG0780037354.01.T01:CDS 35.0%
ATTCTTGACTATGACCACAA+GGG - Chr7:24140583-24140602 MsG0780037354.01.T01:intron 35.0%
ATTGTACTTGCATAACTAGC+GGG - Chr7:24142327-24142346 MsG0780037354.01.T01:intron 35.0%
CATTGTACTTGCATAACTAG+CGG - Chr7:24142326-24142345 MsG0780037354.01.T01:intron 35.0%
CTATTTATTGAGCCAGTGAA+TGG + Chr7:24140784-24140803 None:intergenic 35.0%
GAGTAACTTGGATTTATCCT+CGG + Chr7:24141199-24141218 None:intergenic 35.0%
GATACTTCTCTTCCTTACTT+CGG - Chr7:24141603-24141622 MsG0780037354.01.T01:CDS 35.0%
GATTGTTAGCGTACAGAAAA+AGG - Chr7:24141316-24141335 MsG0780037354.01.T01:intron 35.0%
GGCTTTCATTTGTTCCTTAT+TGG - Chr7:24142239-24142258 MsG0780037354.01.T01:intron 35.0%
GGTACTTAATCCGTTTGTAA+GGG - Chr7:24140554-24140573 MsG0780037354.01.T01:intron 35.0%
GTACTTAATCCGTTTGTAAG+GGG - Chr7:24140555-24140574 MsG0780037354.01.T01:intron 35.0%
GTTATTGACACTGTTTGGAA+GGG + Chr7:24140288-24140307 None:intergenic 35.0%
GTTGAAGATGATCTAGACAT+CGG - Chr7:24143044-24143063 MsG0780037354.01.T01:intron 35.0%
TAGGTAAAAGGAAATGTCTG+AGG + Chr7:24142564-24142583 None:intergenic 35.0%
TATTAAACCTGATTCAGTGG+TGG - Chr7:24140455-24140474 MsG0780037354.01.T01:CDS 35.0%
TATTAAAGATATCACAGCGG+CGG - Chr7:24143075-24143094 MsG0780037354.01.T01:intron 35.0%
TATTCTCAACTACCATTCAC+TGG - Chr7:24140769-24140788 MsG0780037354.01.T01:intron 35.0%
TCACAATACTTCACTCTTAC+AGG + Chr7:24141775-24141794 None:intergenic 35.0%
TGGTCATTCAAGACAAATCT+AGG + Chr7:24142666-24142685 None:intergenic 35.0%
TTCTTTCATAATGATGTGCC+TGG - Chr7:24141950-24141969 MsG0780037354.01.T01:intron 35.0%
TTGGAGGAAGACTGATATTT+GGG - Chr7:24139885-24139904 MsG0780037354.01.T01:three_prime_UTR 35.0%
TTTGAATTGGCAAGTACATC+TGG + Chr7:24143266-24143285 None:intergenic 35.0%
TTTGGAGGAAGACTGATATT+TGG - Chr7:24139884-24139903 MsG0780037354.01.T01:three_prime_UTR 35.0%
! ACAATCAATAGTGGAATGGT+AGG - Chr7:24141163-24141182 MsG0780037354.01.T01:CDS 35.0%
! AGCCTTCAAGGAACAATTTT+CGG - Chr7:24142928-24142947 MsG0780037354.01.T01:intron 35.0%
! ATCTGAAGGTGATTCAGTTT+TGG - Chr7:24143160-24143179 MsG0780037354.01.T01:intron 35.0%
! GAAAAACATGGATTTGGTCA+TGG - Chr7:24140622-24140641 MsG0780037354.01.T01:intron 35.0%
! GTATCGAAAGTTTTCATAGG+TGG + Chr7:24142832-24142851 None:intergenic 35.0%
! TCTGAAGGTGATTCAGTTTT+GGG - Chr7:24143161-24143180 MsG0780037354.01.T01:intron 35.0%
! TCTTTTGTGTATTCGTAGCA+AGG - Chr7:24139963-24139982 MsG0780037354.01.T01:three_prime_UTR 35.0%
! TTCATCTCTTTGTGGTTTGT+TGG - Chr7:24142206-24142225 MsG0780037354.01.T01:intron 35.0%
! TTTTGATCATCATTGCCCTT+GGG - Chr7:24141861-24141880 MsG0780037354.01.T01:intron 35.0%
!! ATATGTTGATTTCTGAGAGC+TGG - Chr7:24141537-24141556 MsG0780037354.01.T01:CDS 35.0%
!! ATTGCTTATCAGTTTGTTGC+TGG - Chr7:24139922-24139941 MsG0780037354.01.T01:three_prime_UTR 35.0%
!! GTTTTGATGGATGAGAATCA+TGG - Chr7:24142125-24142144 MsG0780037354.01.T01:intron 35.0%
AATCTAGGCACGAACGAATT+AGG + Chr7:24142651-24142670 None:intergenic 40.0%
ACCATTACTTCCTTTGTTCG+AGG + Chr7:24141742-24141761 None:intergenic 40.0%
AGGATCAACGTTTACAATCG+GGG - Chr7:24142864-24142883 MsG0780037354.01.T01:intron 40.0%
ATGAAGACATAAGGAGCAGA+GGG - Chr7:24143114-24143133 MsG0780037354.01.T01:intron 40.0%
CAACAGTTCAACCAGAAGAA+AGG - Chr7:24143201-24143220 MsG0780037354.01.T01:intron 40.0%
CAGGATCAACGTTTACAATC+GGG - Chr7:24142863-24142882 MsG0780037354.01.T01:intron 40.0%
CCATTACTTCCTTTGTTCGA+GGG + Chr7:24141741-24141760 None:intergenic 40.0%
CCTTACAACAATGCATCTGA+AGG - Chr7:24143146-24143165 MsG0780037354.01.T01:intron 40.0%
CCTTCAGATGCATTGTTGTA+AGG + Chr7:24143149-24143168 None:intergenic 40.0%
GCCGCTGTGATATCTTTAAT+AGG + Chr7:24143076-24143095 None:intergenic 40.0%
GGGTACTTAATCCGTTTGTA+AGG - Chr7:24140553-24140572 MsG0780037354.01.T01:intron 40.0%
GTACAAAAGTGAAGCCTTCA+AGG - Chr7:24142916-24142935 MsG0780037354.01.T01:intron 40.0%
TCATCTTCAACCTTAGAACG+AGG + Chr7:24143035-24143054 None:intergenic 40.0%
TGGTAGGATTTAACAAACCG+AGG - Chr7:24141179-24141198 MsG0780037354.01.T01:CDS 40.0%
TTCGATACAGAGCAGATAAC+AGG - Chr7:24142844-24142863 MsG0780037354.01.T01:intron 40.0%
TTTGTTGCTGGTCATAGTTC+CGG - Chr7:24139934-24139953 MsG0780037354.01.T01:three_prime_UTR 40.0%
! ATGATGGAAAGACAGTAGTG+AGG - Chr7:24142402-24142421 MsG0780037354.01.T01:intron 40.0%
! CTTTCTTCTGGTTGAACTGT+TGG + Chr7:24143203-24143222 None:intergenic 40.0%
! GCCTTCAAGGAACAATTTTC+GGG - Chr7:24142929-24142948 MsG0780037354.01.T01:intron 40.0%
! GTCATGTGACCAACCTTTTT+AGG + Chr7:24140506-24140525 None:intergenic 40.0%
! TATGTAATTTTGCCTGCACG+AGG + Chr7:24140528-24140547 None:intergenic 40.0%
! TATTCGTAGCAAGGCATCTT+CGG - Chr7:24139972-24139991 MsG0780037354.01.T01:three_prime_UTR 40.0%
!! AGTAAGGTTTTGGCCTGTTT+TGG - Chr7:24141464-24141483 MsG0780037354.01.T01:CDS 40.0%
!! ATCTCTTTGTGGTTTGTTGG+TGG - Chr7:24142209-24142228 MsG0780037354.01.T01:intron 40.0%
!! GTTTTGATCATCATTGCCCT+TGG - Chr7:24141860-24141879 MsG0780037354.01.T01:intron 40.0%
!! TTTTCGGGCTTTAGTTCAAG+AGG - Chr7:24142944-24142963 MsG0780037354.01.T01:intron 40.0%
!!! AGGATATGCTATTTTGGTGG+TGG - Chr7:24140016-24140035 MsG0780037354.01.T01:exon 40.0%
!!! TGCAGGATATGCTATTTTGG+TGG - Chr7:24140013-24140032 MsG0780037354.01.T01:three_prime_UTR 40.0%
ACCATACCAGTCCAATGCAT+TGG + Chr7:24141891-24141910 None:intergenic 45.0%
ATGAGAATCATGGGACAGTG+TGG - Chr7:24142135-24142154 MsG0780037354.01.T01:intron 45.0%
ATGGAAAGACAGTAGTGAGG+TGG - Chr7:24142405-24142424 MsG0780037354.01.T01:intron 45.0%
ATGGAGCAATGTGAACAACG+AGG + Chr7:24141820-24141839 None:intergenic 45.0%
CAACTTGAGTGCCTTTCTTC+TGG + Chr7:24143215-24143234 None:intergenic 45.0%
CACAACTCCAAACGACTGTT+TGG + Chr7:24140423-24140442 None:intergenic 45.0%
CATTAGTACGACAGATGCAG+GGG + Chr7:24142177-24142196 None:intergenic 45.0%
CCATTAGTACGACAGATGCA+GGG + Chr7:24142178-24142197 None:intergenic 45.0%
CCCTCGAACAAAGGAAGTAA+TGG - Chr7:24141738-24141757 MsG0780037354.01.T01:CDS 45.0%
CGTCCGTCTCTATTGACATT+GGG - Chr7:24141689-24141708 MsG0780037354.01.T01:CDS 45.0%
CTGTAGAGTTCATTCCCTTG+TGG + Chr7:24140600-24140619 None:intergenic 45.0%
GAACCTGAACAAGATGTAGG+TGG - Chr7:24143005-24143024 MsG0780037354.01.T01:intron 45.0%
GATGAAGACATAAGGAGCAG+AGG - Chr7:24143113-24143132 MsG0780037354.01.T01:intron 45.0%
GCCCGAAAATTGTTCCTTGA+AGG + Chr7:24142933-24142952 None:intergenic 45.0%
GGATCAACGTTTACAATCGG+GGG - Chr7:24142865-24142884 MsG0780037354.01.T01:intron 45.0%
GTCCGTCTCTATTGACATTG+GGG - Chr7:24141690-24141709 MsG0780037354.01.T01:CDS 45.0%
GTGAAAGAAATTCACGGACC+TGG + Chr7:24142271-24142290 None:intergenic 45.0%
GTTCCTTATTGGCACAAACC+AGG - Chr7:24142250-24142269 MsG0780037354.01.T01:intron 45.0%
TAGAGACGGACGAGTCATAA+CGG + Chr7:24141681-24141700 None:intergenic 45.0%
TAGGAATTTACATCCGCCTG+AGG - Chr7:24141648-24141667 MsG0780037354.01.T01:CDS 45.0%
TCAGGCGGATGTAAATTCCT+AGG + Chr7:24141649-24141668 None:intergenic 45.0%
TCCAAACGACTGTTTGGATG+TGG + Chr7:24140417-24140436 None:intergenic 45.0%
TCCACATCCAAACAGTCGTT+TGG - Chr7:24140413-24140432 MsG0780037354.01.T01:CDS 45.0%
TCCCCCAATGTCAATAGAGA+CGG + Chr7:24141695-24141714 None:intergenic 45.0%
TCCGTCTCTATTGACATTGG+GGG - Chr7:24141691-24141710 MsG0780037354.01.T01:CDS 45.0%
TCGTCCGTCTCTATTGACAT+TGG - Chr7:24141688-24141707 MsG0780037354.01.T01:CDS 45.0%
TCTCCACCTACATCTTGTTC+AGG + Chr7:24143011-24143030 None:intergenic 45.0%
TTGGAGAAGAAGTGGAAGCT+GGG - Chr7:24143232-24143251 MsG0780037354.01.T01:intron 45.0%
TTTCTGCGCGTCAATGATTG+CGG - Chr7:24143309-24143328 MsG0780037354.01.T01:intron 45.0%
! CAAACAGTCGTTTGGAGTTG+TGG - Chr7:24140421-24140440 MsG0780037354.01.T01:CDS 45.0%
! CTACATCTTGTTCAGGTTCC+CGG + Chr7:24143004-24143023 None:intergenic 45.0%
! TACATCTTGTTCAGGTTCCC+GGG + Chr7:24143003-24143022 None:intergenic 45.0%
! TAGTTCAAGAGGAGGTACAG+AGG - Chr7:24142955-24142974 MsG0780037354.01.T01:intron 45.0%
! TCATAACGGAACTCTTCCTC+AGG + Chr7:24141667-24141686 None:intergenic 45.0%
!! CACTCAAGTTGGAGAAGAAG+TGG - Chr7:24143224-24143243 MsG0780037354.01.T01:intron 45.0%
!! CAGAAGAAAGGCACTCAAGT+TGG - Chr7:24143213-24143232 MsG0780037354.01.T01:intron 45.0%
!! TGGTTTGTTGGTGGACTAAC+TGG - Chr7:24142218-24142237 MsG0780037354.01.T01:intron 45.0%
!! TTGGTTTTCCCAATGTGCAG+AGG - Chr7:24142018-24142037 MsG0780037354.01.T01:intron 45.0%
!! TTTAAATATTTATTTATGTT+TGG - Chr7:24141999-24142018 MsG0780037354.01.T01:intron 5.0%
ACGGTAGTTCCTCTGCACAT+TGG + Chr7:24142030-24142049 None:intergenic 50.0%
AGACAGTAGTGAGGTGGACA+TGG - Chr7:24142411-24142430 MsG0780037354.01.T01:intron 50.0%
AGGTGGAGATCCTCGTTCTA+AGG - Chr7:24143022-24143041 MsG0780037354.01.T01:intron 50.0%
ATAAGGAGCAGAGGGAGCAA+TGG - Chr7:24143122-24143141 MsG0780037354.01.T01:intron 50.0%
CCCTGCATCTGTCGTACTAA+TGG - Chr7:24142175-24142194 MsG0780037354.01.T01:intron 50.0%
CCTTCAGTTCCCTCGAACAA+AGG - Chr7:24141729-24141748 MsG0780037354.01.T01:CDS 50.0%
CCTTTGTTCGAGGGAACTGA+AGG + Chr7:24141732-24141751 None:intergenic 50.0%
CGGGAACCTGAACAAGATGT+AGG - Chr7:24143002-24143021 MsG0780037354.01.T01:intron 50.0%
CGGTAGTTCCTCTGCACATT+GGG + Chr7:24142029-24142048 None:intergenic 50.0%
GAATCATGGGACAGTGTGGA+AGG - Chr7:24142139-24142158 MsG0780037354.01.T01:intron 50.0%
GAGCAATGTGAACAACGAGG+AGG + Chr7:24141817-24141836 None:intergenic 50.0%
GATCATCATTGCCCTTGGGT+TGG - Chr7:24141865-24141884 MsG0780037354.01.T01:intron 50.0%
GCCATTAGTACGACAGATGC+AGG + Chr7:24142179-24142198 None:intergenic 50.0%
GTTGGAGAAGAAGTGGAAGC+TGG - Chr7:24143231-24143250 MsG0780037354.01.T01:intron 50.0%
TAACGGAACTCTTCCTCAGG+CGG + Chr7:24141664-24141683 None:intergenic 50.0%
! CAATGCATTGGCCAACCCAA+GGG + Chr7:24141879-24141898 None:intergenic 50.0%
! GGACCTGGTTTGTGCCAATA+AGG + Chr7:24142256-24142275 None:intergenic 50.0%
! TCGGGCTTTAGTTCAAGAGG+AGG - Chr7:24142947-24142966 MsG0780037354.01.T01:intron 50.0%
! TGATTTCTGAGAGCTGGAGC+TGG - Chr7:24141543-24141562 MsG0780037354.01.T01:CDS 50.0%
!! GCCAATGCATTGGACTGGTA+TGG - Chr7:24141887-24141906 MsG0780037354.01.T01:intron 50.0%
GCGATCCGGGGATTATTCCT+AGG - Chr7:24141629-24141648 MsG0780037354.01.T01:CDS 55.0%
GTTCGAGGGAACTGAAGGCT+TGG + Chr7:24141727-24141746 None:intergenic 55.0%
TGGTCACCCACCACTGAATC+AGG + Chr7:24140465-24140484 None:intergenic 55.0%
TTGGTCACATGACCTCGTGC+AGG - Chr7:24140513-24140532 MsG0780037354.01.T01:CDS 55.0%
! CCAATGCATTGGCCAACCCA+AGG + Chr7:24141880-24141899 None:intergenic 55.0%
! GGTTGGCCAATGCATTGGAC+TGG - Chr7:24141882-24141901 MsG0780037354.01.T01:intron 55.0%
!! CCTTGGGTTGGCCAATGCAT+TGG - Chr7:24141877-24141896 MsG0780037354.01.T01:intron 55.0%
AGGTACAGAGGCCACCTCCT+CGG - Chr7:24142967-24142986 MsG0780037354.01.T01:intron 60.0%
CCTTACTTCGGCACGCGATC+CGG - Chr7:24141615-24141634 MsG0780037354.01.T01:CDS 60.0%
CTCCTCGGGTAGTTACGACC+CGG - Chr7:24142982-24143001 MsG0780037354.01.T01:intron 60.0%
CTTACTTCGGCACGCGATCC+GGG - Chr7:24141616-24141635 MsG0780037354.01.T01:CDS 60.0%
GTCGTAACTACCCGAGGAGG+TGG + Chr7:24142981-24143000 None:intergenic 60.0%
TCCTCGGGTAGTTACGACCC+GGG - Chr7:24142983-24143002 MsG0780037354.01.T01:intron 60.0%
TTACTTCGGCACGCGATCCG+GGG - Chr7:24141617-24141636 MsG0780037354.01.T01:CDS 60.0%
CCGGATCGCGTGCCGAAGTA+AGG + Chr7:24141618-24141637 None:intergenic 65.0%
CGGGTCGTAACTACCCGAGG+AGG + Chr7:24142984-24143003 None:intergenic 65.0%
GGTACAGAGGCCACCTCCTC+GGG - Chr7:24142968-24142987 MsG0780037354.01.T01:intron 65.0%
TCCCGGGTCGTAACTACCCG+AGG + Chr7:24142987-24143006 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 24139875 24143485 24139875 ID=MsG0780037354.01;Name=MsG0780037354.01
Chr7 mRNA 24139875 24143485 24139875 ID=MsG0780037354.01.T01;Parent=MsG0780037354.01;Name=MsG0780037354.01.T01;_AED=0.44;_eAED=0.44;_QI=0|0.66|0.75|1|1|0.75|4|160|372
Chr7 exon 24143405 24143485 24143405 ID=MsG0780037354.01.T01:exon:4780;Parent=MsG0780037354.01.T01
Chr7 exon 24141457 24141762 24141457 ID=MsG0780037354.01.T01:exon:4781;Parent=MsG0780037354.01.T01
Chr7 exon 24141089 24141322 24141089 ID=MsG0780037354.01.T01:exon:4782;Parent=MsG0780037354.01.T01
Chr7 exon 24139875 24140532 24139875 ID=MsG0780037354.01.T01:exon:4783;Parent=MsG0780037354.01.T01
Chr7 CDS 24143405 24143485 24143405 ID=MsG0780037354.01.T01:cds;Parent=MsG0780037354.01.T01
Chr7 CDS 24141457 24141762 24141457 ID=MsG0780037354.01.T01:cds;Parent=MsG0780037354.01.T01
Chr7 CDS 24141089 24141322 24141089 ID=MsG0780037354.01.T01:cds;Parent=MsG0780037354.01.T01
Chr7 CDS 24140035 24140532 24140035 ID=MsG0780037354.01.T01:cds;Parent=MsG0780037354.01.T01
Chr7 three_prime_UTR 24139875 24140034 24139875 ID=MsG0780037354.01.T01:three_prime_utr;Parent=MsG0780037354.01.T01
Gene Sequence

>MsG0780037354.01.T01

AAATTCCTATTTGGAGGAAGACTGATATTTGGGCCTGATGCTAAGTCATTGCTTATCAGTTTGTTGCTGGTCATAGTTCCGGTGCTGATACTTCTCTTCCTTACTTCGGCACGCGATCCGGGGATTATTCCTAGGAATTTACATCCGCCTGAGGAAGAGTTCCGTTATGACTCGTCCGTCTCTATTGACATTGGGGGAAGACAAACACCAAGCCTTCAGTTCCCTCGAACAAAGGAAGTAATGGTCAATGGCCTTCCTGTAAGAGTGAAGTATTGTGATACATGTATGTTGTATCGTCCTCCTCGTTGTTCACATTGCTCCATTTGCAACAATTGTGTTGAACGTTTTGATCATCATTGCCCTTGGGTTGGCCAATGCATTGGACTGAGGAACTACCGTTACTTCTTTATGTTTGTTTCTTCGGCAACTCTTCTATGCATCTATGTGTTTTCAATCTCAGCTTTTTACATCAAGGTTTTGATGGATGAGAATCATGGGACAGTGTGGAAGGCAATGAAAGAATCCCCTGCATCTGTCGTACTAATGGCATATTGTTTCATCTCTTTGTGGTTTGTTGGTGGACTAACTGGCTTTCATTTGTTCCTTATTGGCACAAACCAGACCACCTATGAAAACTTTCGATACAGAGCAGATAACAGGATCAACGTTTACAATCGGGGGTGTTTAAATAATTTTCTGGAAGTATTTTGTACAAAAGTGAAGCCTTCAAGGAACAATTTTCGGGCTTTAGTTCAAGAGGAGGTACAGAGGCCACCTCCTCGGGTAGTTACGACCCGGGAACCTGAACAAGATGTAGGTGGAGATCCTCGTTCTAAGGTTGAAGATGATCTAGACATCGGTGAAGACCTATTAAAGATATCACAGCGGCGGAATATTGAAGAAATCGATGAAGACATAAGGAGCAGAGGGAGCAATGGACCTTACAACAATGCATCTGAAGGTGATTCAGTTTTGGGCTCAGATCGTCGAGCTCCAACAGTTCAACCAGAAGAAAGGCACTCAAGTTGGAGAAGAAGTGGAAGCTGGGAAATTGCGCCAGATGTACTTGCCAATTCAAATGTAACTGAAACTAGAAGCTATGTTTCTGCGCGTCAATGA
Protein sequence

>MsG0780037354.01.T01

KFLFGGRLIFGPDAKSLLISLLLVIVPVLILLFLTSARDPGIIPRNLHPPEEEFRYDSSVSIDIGGRQTPSLQFPRTKEVMVNGLPVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSATLLCIYVFSISAFYIKVLMDENHGTVWKAMKESPASVVLMAYCFISLWFVGGLTGFHLFLIGTNQTTYENFRYRADNRINVYNRGCLNNFLEVFCTKVKPSRNNFRALVQEEVQRPPPRVVTTREPEQDVGGDPRSKVEDDLDIGEDLLKISQRRNIEEIDEDIRSRGSNGPYNNASEGDSVLGSDRRAPTVQPEERHSSWRRSGSWEIAPDVLANSNVTETRSYVSARQ*