AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037468.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037468.01.T01 MTR_3g025300 88.636 264 4 1 14 277 1823 2060 4.25e-154 478
MsG0780037468.01.T01 MTR_2g064740 29.119 261 145 10 24 275 1922 2151 1.07e-22 100
MsG0780037468.01.T01 MTR_4g008780 28.968 252 128 9 24 269 638 844 5.39e-22 98.2
MsG0780037468.01.T01 MTR_4g011450 27.652 264 136 9 23 278 1821 2037 6.47e-21 95.1
MsG0780037468.01.T01 MTR_4g011450 27.652 264 136 9 23 278 1848 2064 6.48e-21 95.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037468.01.T01 AT5G61140 60.076 263 77 3 16 277 1895 2130 3.30e-100 325
MsG0780037468.01.T01 AT5G61140 60.076 263 77 3 16 277 1884 2119 4.62e-100 325
MsG0780037468.01.T01 AT1G20960 27.444 266 152 9 24 278 1903 2138 3.79e-21 95.9
MsG0780037468.01.T01 AT1G20960 27.444 266 152 9 24 278 1903 2138 3.79e-21 95.9
MsG0780037468.01.T01 AT2G42270 27.459 244 140 7 24 259 1904 2118 8.32e-18 85.9

Find 86 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTGACCTTTCTTCTTTC+TGG -0.058379 7:-26471690 MsG0780037468.01.T01:CDS
GTCCCTATAATTAAGATATT+TGG 0.150513 7:-26467107 MsG0780037468.01.T01:three_prime_UTR
CAAAGCAAATCTTCTATTTC+AGG 0.170218 7:-26472029 MsG0780037468.01.T01:intron
AAACCAAATATCTTAATTAT+AGG 0.207592 7:+26467104 None:intergenic
ACCTGACCTTTCTTCTTTCT+GGG 0.221582 7:-26471689 MsG0780037468.01.T01:CDS
TAAGGCTTTGTTTGGGAGTT+TGG 0.226913 7:-26468314 MsG0780037468.01.T01:CDS
TTTGGAGGGGAGGGGAGGGG+AGG 0.254388 7:-26468296 MsG0780037468.01.T01:CDS
GGGAGTTTGGAGGGGAGGGG+AGG 0.289218 7:-26468301 MsG0780037468.01.T01:CDS
CTTTGTACGTACTGTATAAA+AGG 0.294924 7:-26467488 MsG0780037468.01.T01:CDS
GAGTTTGGAGGGGAGGGGAG+GGG 0.299317 7:-26468299 MsG0780037468.01.T01:CDS
GTTCTTGAAGCACAAAGAAT+TGG 0.311691 7:-26468341 MsG0780037468.01.T01:CDS
TGAAGATTAGCTGGAGTTAC+AGG 0.315414 7:+26468473 None:intergenic
TTGGACACTAAGGCTTTGTT+TGG 0.318353 7:-26468322 MsG0780037468.01.T01:CDS
CACTAATTGGCAACTCCAAT+TGG 0.330725 7:+26471862 None:intergenic
TTTGGGAGTTTGGAGGGGAG+GGG 0.336426 7:-26468304 MsG0780037468.01.T01:CDS
AACCAAATATCTTAATTATA+GGG 0.341987 7:+26467105 None:intergenic
TAAAATGAAATTAAAGCTTC+AGG 0.346542 7:-26469153 MsG0780037468.01.T01:CDS
TGAAGAAATCTTTGATTTGA+AGG 0.346726 7:+26467436 None:intergenic
GACTGTCATTGGAAATTTCC+CGG 0.346850 7:-26469723 MsG0780037468.01.T01:CDS
GTTTGGGAGTTTGGAGGGGA+GGG 0.354818 7:-26468305 MsG0780037468.01.T01:CDS
TGTTTGGGAGTTTGGAGGGG+AGG 0.355934 7:-26468306 MsG0780037468.01.T01:CDS
GGAGTTTGGAGGGGAGGGGA+GGG 0.360686 7:-26468300 MsG0780037468.01.T01:CDS
GACAGTCTGCAACGCTGCCC+TGG 0.362189 7:+26469739 None:intergenic
GAATATTGTCAATGACTTCA+TGG 0.365906 7:+26472141 None:intergenic
GAGCAATGGTGGTTGGTTCT+TGG 0.367529 7:-26468572 MsG0780037468.01.T01:CDS
GCTTTGTTTGGGAGTTTGGA+GGG 0.374549 7:-26468310 MsG0780037468.01.T01:CDS
AGAAGATTTGCTTTGGTATG+AGG 0.375753 7:+26472037 None:intergenic
CTGAAATAGAAGATTTGCTT+TGG 0.388701 7:+26472030 None:intergenic
GGCTTTGTTTGGGAGTTTGG+AGG 0.394215 7:-26468311 MsG0780037468.01.T01:CDS
AAGCTTCAGGAGAGGGAAAC+TGG 0.401787 7:-26469140 MsG0780037468.01.T01:CDS
TTGGAGGGGAGGGGAGGGGA+GGG 0.405392 7:-26468295 MsG0780037468.01.T01:intron
CATTCGATTACATAACTTGT+TGG 0.408035 7:-26467539 MsG0780037468.01.T01:CDS
ATAACTTCACTTAGCAAAAG+AGG 0.411623 7:-26469794 MsG0780037468.01.T01:CDS
CTTTGTTTGGGAGTTTGGAG+GGG 0.414658 7:-26468309 MsG0780037468.01.T01:CDS
GCAGCGTTGCAGACTGTCAT+TGG 0.425141 7:-26469734 MsG0780037468.01.T01:CDS
TCCAGTGGATAAGAATCATT+TGG 0.426690 7:-26472065 MsG0780037468.01.T01:CDS
TGTAACTCCAGCTAATCTTC+AGG 0.429183 7:-26468471 MsG0780037468.01.T01:intron
TTCTGATTTGCTTATGTAGC+AGG 0.436647 7:+26467399 None:intergenic
TCTGTGACATAGTCACTAAT+TGG 0.438718 7:+26471849 None:intergenic
CCCGGCTTCAAGATTGTACC+AGG 0.446320 7:-26469705 MsG0780037468.01.T01:intron
CTAGTCTCCGACTGTTACAT+TGG 0.452411 7:-26467575 MsG0780037468.01.T01:CDS
AGCCTCTGCACAAAGACTAT+TGG 0.453995 7:+26467509 None:intergenic
TTGCATGCATCTTCTGCAAA+TGG 0.465969 7:-26471736 MsG0780037468.01.T01:CDS
TCCAAATGATTCTTATCCAC+TGG 0.473058 7:+26472064 None:intergenic
CACATACATCAATCATGGCC+TGG 0.482727 7:+26471790 None:intergenic
GAAGATTTGCTTTGGTATGA+GGG 0.486612 7:+26472038 None:intergenic
ACTAATTGGCAACTCCAATT+GGG 0.494523 7:+26471863 None:intergenic
ACCTGGTACAATCTTGAAGC+CGG 0.499615 7:+26469704 None:intergenic
ACTGTATAAAAGGATTATAC+TGG 0.503469 7:-26467478 MsG0780037468.01.T01:CDS
TTCTGTAGCTGCAAATGTCC+TGG 0.504969 7:+26467343 None:intergenic
TGGACACTAAGGCTTTGTTT+GGG 0.507191 7:-26468321 MsG0780037468.01.T01:CDS
AAGAGTTGCTAGATATTCCC+AGG 0.515013 7:-26469757 MsG0780037468.01.T01:CDS
ACAGTCTGCAACGCTGCCCT+GGG 0.515431 7:+26469740 None:intergenic
TATATATTGCTATGACTGAC+TGG 0.516667 7:-26467200 MsG0780037468.01.T01:three_prime_UTR
TCTTCTGCAAATGGTAATGC+AGG 0.521612 7:-26471727 MsG0780037468.01.T01:CDS
TCAGAGTATACGAATAATCC+AGG 0.523114 7:-26471808 MsG0780037468.01.T01:CDS
GCACAAAGAATTGGACACTA+AGG 0.533057 7:-26468332 MsG0780037468.01.T01:CDS
GAAATTAAAGCTTCAGGAGA+GGG 0.535714 7:-26469147 MsG0780037468.01.T01:CDS
ATTTGCACATACATCAATCA+TGG 0.536129 7:+26471785 None:intergenic
ATAAGATCGTTATTCATGCA+TGG 0.536334 7:+26469815 None:intergenic
GCCCAGAAAGAAGAAAGGTC+AGG 0.537338 7:+26471688 None:intergenic
TAAGATCGTTATTCATGCAT+GGG 0.544607 7:+26469816 None:intergenic
TGAAATTAAAGCTTCAGGAG+AGG 0.546035 7:-26469148 MsG0780037468.01.T01:CDS
TACAGATAAAAGAGGAGCAA+TGG 0.554000 7:-26468586 MsG0780037468.01.T01:intron
CCTGGTACAATCTTGAAGCC+GGG 0.559053 7:+26469705 None:intergenic
ATTGATGTATGTGCAAATAG+TGG 0.563730 7:-26471780 MsG0780037468.01.T01:CDS
CTTAATTATAGGGACTGAAG+TGG 0.564167 7:+26467115 None:intergenic
ATTTGTTCCTCGATTTCCAA+AGG 0.570505 7:-26469048 MsG0780037468.01.T01:intron
TATACTGGCTAACACTGACT+TGG 0.576375 7:-26467463 MsG0780037468.01.T01:CDS
CAACAGCCCAGAAAGAAGAA+AGG 0.579056 7:+26471683 None:intergenic
AGCCAATAGTCTTTGTGCAG+AGG 0.585328 7:-26467511 MsG0780037468.01.T01:CDS
TTCGAATCCAATGTAACAGT+CGG 0.591518 7:+26467568 None:intergenic
AGCATATAGCTCAGACGTAG+AGG 0.592540 7:+26468544 None:intergenic
AAAAGAGGAGCAATGGTGGT+TGG 0.595549 7:-26468579 MsG0780037468.01.T01:CDS
TTTGTGTCTACAGATAAAAG+AGG 0.604149 7:-26468594 MsG0780037468.01.T01:intron
AGTGGATAAGAATCATTTGG+AGG 0.608206 7:-26472062 MsG0780037468.01.T01:CDS
TTAGGGTTTATGGTTGGACA+AGG 0.617731 7:-26469858 MsG0780037468.01.T01:intron
AAACATACCTTTGGAAATCG+AGG 0.618927 7:+26469041 None:intergenic
AGATAAAAGAGGAGCAATGG+TGG 0.619075 7:-26468583 MsG0780037468.01.T01:CDS
AGAGGGAAACTGGTGGTGAG+AGG 0.628885 7:-26469130 MsG0780037468.01.T01:CDS
ATGTATGTGCAAATAGTGGT+TGG 0.648470 7:-26471776 MsG0780037468.01.T01:CDS
GGAGAAAGTTAGATATCCAG+TGG 0.653436 7:-26472080 MsG0780037468.01.T01:CDS
TGCACATATCTAATTATACC+AGG 0.660459 7:-26467361 MsG0780037468.01.T01:three_prime_UTR
TGGACAAGGACTCTTCATTG+TGG 0.668203 7:-26469844 MsG0780037468.01.T01:CDS
AGAGTTGCTAGATATTCCCA+GGG 0.705071 7:-26469756 MsG0780037468.01.T01:CDS
CTTCAGGAGAGGGAAACTGG+TGG 0.722482 7:-26469137 MsG0780037468.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATAATAGTAAATAGATA+TGG + Chr7:26469826-26469845 None:intergenic 10.0%
!! CAACTAATATTTATATAAAA+GGG - Chr7:26469086-26469105 MsG0780037468.01.T01:CDS 10.0%
!! TCAACTAATATTTATATAAA+AGG - Chr7:26469085-26469104 MsG0780037468.01.T01:CDS 10.0%
!!! TTTTATATAAATATTAGTTG+AGG + Chr7:26469086-26469105 None:intergenic 10.0%
!! AAACCAAATATCTTAATTAT+AGG + Chr7:26472137-26472156 None:intergenic 15.0%
!! AACCAAATATCTTAATTATA+GGG + Chr7:26472136-26472155 None:intergenic 15.0%
!! AATTTATCATAGCATAATTT+GGG - Chr7:26469791-26469810 MsG0780037468.01.T01:CDS 15.0%
!! AGAAAATAAATCTTATACTA+CGG - Chr7:26467673-26467692 MsG0780037468.01.T01:intron 15.0%
!! ATAATAAAACAAGATTGATA+TGG - Chr7:26470453-26470472 MsG0780037468.01.T01:intron 15.0%
!! TAATAAAACAAGATTGATAT+GGG - Chr7:26470454-26470473 MsG0780037468.01.T01:intron 15.0%
!! TATGATAAATTCCTAAAATA+AGG + Chr7:26469782-26469801 None:intergenic 15.0%
!!! AAATTGTGAATCAATTTTTT+AGG - Chr7:26470259-26470278 MsG0780037468.01.T01:intron 15.0%
!!! AATATATACTTTTTCTTAGA+AGG - Chr7:26471917-26471936 MsG0780037468.01.T01:intron 15.0%
!!! ATGTTTTGTAATTTATTTAG+TGG + Chr7:26469208-26469227 None:intergenic 15.0%
!!! TAAATATATATTTTTGAAGG+AGG - Chr7:26472064-26472083 MsG0780037468.01.T01:CDS 15.0%
!!! TTAATTTCATTTTAACATGA+GGG + Chr7:26470079-26470098 None:intergenic 15.0%
!!! TTTAATTTCATTTTAACATG+AGG + Chr7:26470080-26470099 None:intergenic 15.0%
!! AATAAAACAAGATTGATATG+GGG - Chr7:26470455-26470474 MsG0780037468.01.T01:intron 20.0%
!! AATACAAACTGTTGAAATTT+GGG + Chr7:26468249-26468268 None:intergenic 20.0%
!! ATTTATCATAGCATAATTTG+GGG - Chr7:26469792-26469811 MsG0780037468.01.T01:CDS 20.0%
!! CAACTTCAATTAATCATTTA+AGG - Chr7:26468493-26468512 MsG0780037468.01.T01:CDS 20.0%
!! CATGAAAAAAAAATCTTTCT+TGG - Chr7:26467624-26467643 MsG0780037468.01.T01:intron 20.0%
!! GAATTTATCATAGCATAATT+TGG - Chr7:26469790-26469809 MsG0780037468.01.T01:CDS 20.0%
!! TAAAATGAAATTAAAGCTTC+AGG - Chr7:26470085-26470104 MsG0780037468.01.T01:intron 20.0%
!! TAAACAAGAAAAATTGAAAG+AGG + Chr7:26467313-26467332 None:intergenic 20.0%
!! TATTAAGTATAAGCTAAAAG+AGG + Chr7:26470004-26470023 None:intergenic 20.0%
!! TGGTACTATCAAATAAAATA+AGG + Chr7:26469188-26469207 None:intergenic 20.0%
!! TTCAAATGATACAAAACTTA+TGG + Chr7:26470563-26470582 None:intergenic 20.0%
!! TTTATATAAAAGGGAATTGT+TGG - Chr7:26469095-26469114 MsG0780037468.01.T01:CDS 20.0%
!!! AGATTCTTGTTATTTTCTTT+TGG - Chr7:26469594-26469613 MsG0780037468.01.T01:intron 20.0%
!!! ATATTTTAAGAGTGAAATGT+AGG + Chr7:26469348-26469367 None:intergenic 20.0%
!!! CATTGTTTTGTCAAAAATTA+TGG - Chr7:26468901-26468920 MsG0780037468.01.T01:intron 20.0%
!!! TAAGATATTTGGTTTTGAAT+GGG - Chr7:26472142-26472161 MsG0780037468.01.T01:CDS 20.0%
!!! TAATACTTTATTTATCTTCC+AGG - Chr7:26469971-26469990 MsG0780037468.01.T01:intron 20.0%
!!! TAATTGTGTTACCTTATTTT+AGG - Chr7:26469768-26469787 MsG0780037468.01.T01:CDS 20.0%
!!! TATAAATTTAGGCTTTGTTT+GGG + Chr7:26471284-26471303 None:intergenic 20.0%
!!! TTAAGATATTTGGTTTTGAA+TGG - Chr7:26472141-26472160 MsG0780037468.01.T01:CDS 20.0%
!!! TTATAAATTTAGGCTTTGTT+TGG + Chr7:26471285-26471304 None:intergenic 20.0%
!!! TTTTGTAAACTTAATCTAGA+TGG - Chr7:26468992-26469011 MsG0780037468.01.T01:intron 20.0%
! AAAAATTGAAAGAGGTAATC+TGG + Chr7:26467305-26467324 None:intergenic 25.0%
! AAACACCTATGAATATAACA+AGG - Chr7:26469882-26469901 MsG0780037468.01.T01:intron 25.0%
! AAATTACAAAACATAACTGC+TGG - Chr7:26469214-26469233 MsG0780037468.01.T01:intron 25.0%
! AATTACAAAACATAACTGCT+GGG - Chr7:26469215-26469234 MsG0780037468.01.T01:intron 25.0%
! ACTATTGGCATATTGTATTA+TGG + Chr7:26468629-26468648 None:intergenic 25.0%
! ACTGTATAAAAGGATTATAC+TGG - Chr7:26471760-26471779 MsG0780037468.01.T01:CDS 25.0%
! ATAATACAATATGCCAATAG+TGG - Chr7:26468628-26468647 MsG0780037468.01.T01:intron 25.0%
! ATACAAACTGTTGAAATTTG+GGG + Chr7:26468248-26468267 None:intergenic 25.0%
! ATGCTCAAAATAAATACCTA+GGG - Chr7:26470481-26470500 MsG0780037468.01.T01:intron 25.0%
! ATGCTTCAGATAAATGAATA+GGG - Chr7:26469015-26469034 MsG0780037468.01.T01:intron 25.0%
! CATTAAAGCATGAAGTTATA+AGG + Chr7:26469567-26469586 None:intergenic 25.0%
! CGCTTTCATCTTATAAATTT+AGG + Chr7:26471295-26471314 None:intergenic 25.0%
! GAATACAAACTGTTGAAATT+TGG + Chr7:26468250-26468269 None:intergenic 25.0%
! GTACAAATCTCAATAATTCA+AGG - Chr7:26470341-26470360 MsG0780037468.01.T01:intron 25.0%
! GTCCCTATAATTAAGATATT+TGG - Chr7:26472131-26472150 MsG0780037468.01.T01:CDS 25.0%
! TAATGAATGTTAACGGAAAA+GGG - Chr7:26468421-26468440 MsG0780037468.01.T01:intron 25.0%
! TATTTATGTTCAAATGACAC+AGG + Chr7:26470616-26470635 None:intergenic 25.0%
! TCAAATAAAATAAGGAAGAG+TGG + Chr7:26469180-26469199 None:intergenic 25.0%
! TCTCTGGTTACATAAAATTA+CGG - Chr7:26470413-26470432 MsG0780037468.01.T01:intron 25.0%
! TGTATTTGAAAACATACCTT+TGG + Chr7:26470209-26470228 None:intergenic 25.0%
!! AAAAAACAATGAAGCACTAT+CGG - Chr7:26467137-26467156 MsG0780037468.01.T01:three_prime_UTR 25.0%
!! AATTAATCATTTAAGGCATG+GGG - Chr7:26468500-26468519 MsG0780037468.01.T01:CDS 25.0%
!! AGTAGGAATTTGAAATAGAA+AGG + Chr7:26471405-26471424 None:intergenic 25.0%
!! CAATTAATCATTTAAGGCAT+GGG - Chr7:26468499-26468518 MsG0780037468.01.T01:CDS 25.0%
!! GTTATATTCATAGGTGTTTT+AGG + Chr7:26469881-26469900 None:intergenic 25.0%
!! TCAATTAATCATTTAAGGCA+TGG - Chr7:26468498-26468517 MsG0780037468.01.T01:CDS 25.0%
!! TCTGAAAAGAGTTTCTTTTT+CGG - Chr7:26470716-26470735 MsG0780037468.01.T01:intron 25.0%
!! TTGTATTCCCTAATTTTCAT+GGG - Chr7:26468262-26468281 MsG0780037468.01.T01:intron 25.0%
!! TTTGTATTCCCTAATTTTCA+TGG - Chr7:26468261-26468280 MsG0780037468.01.T01:intron 25.0%
!!! ATTTTCTTTTTGGTTTGTGT+TGG - Chr7:26468018-26468037 MsG0780037468.01.T01:intron 25.0%
!!! TGAAGAAATCTTTGATTTGA+AGG + Chr7:26471805-26471824 None:intergenic 25.0%
!!! TGTGTAGAGTATTTTCTTTT+TGG - Chr7:26468008-26468027 MsG0780037468.01.T01:intron 25.0%
!!! TTAAATTTGATTTGCAACAC+CGG + Chr7:26468313-26468332 None:intergenic 25.0%
!!! TTTGTTTTCTTTCTTTAACC+AGG - Chr7:26470040-26470059 MsG0780037468.01.T01:intron 25.0%
AAAATTATGGCAAAATAGCC+TGG - Chr7:26468914-26468933 MsG0780037468.01.T01:intron 30.0%
AAAGCTGACAATAAATTCTC+TGG - Chr7:26470397-26470416 MsG0780037468.01.T01:intron 30.0%
ACGTATACCTTAGTTATCTT+AGG + Chr7:26467784-26467803 None:intergenic 30.0%
ACTCTTAAAATATTGTGTCC+TGG - Chr7:26469355-26469374 MsG0780037468.01.T01:intron 30.0%
AGTTATAAGGAATCTATACC+TGG + Chr7:26469554-26469573 None:intergenic 30.0%
ATAAAAAAATCCCCCTCATT+TGG - Chr7:26471040-26471059 MsG0780037468.01.T01:intron 30.0%
ATAACTTCACTTAGCAAAAG+AGG - Chr7:26469444-26469463 MsG0780037468.01.T01:intron 30.0%
ATAAGATCGTTATTCATGCA+TGG + Chr7:26469426-26469445 None:intergenic 30.0%
ATGGTATAATGAACAGAGTA+AGG + Chr7:26468692-26468711 None:intergenic 30.0%
ATTGATGTATGTGCAAATAG+TGG - Chr7:26467458-26467477 MsG0780037468.01.T01:CDS 30.0%
ATTTCCTTGTTGCATTAGTA+TGG + Chr7:26469042-26469061 None:intergenic 30.0%
ATTTGCACATACATCAATCA+TGG + Chr7:26467456-26467475 None:intergenic 30.0%
CAAAGCAAATCTTCTATTTC+AGG - Chr7:26467209-26467228 MsG0780037468.01.T01:three_prime_UTR 30.0%
CATGCTCAAAATAAATACCT+AGG - Chr7:26470480-26470499 MsG0780037468.01.T01:intron 30.0%
CGGAACAAATTTCAATCAAA+GGG - Chr7:26469140-26469159 MsG0780037468.01.T01:CDS 30.0%
CGTATACCTTAGTTATCTTA+GGG + Chr7:26467783-26467802 None:intergenic 30.0%
CTCTGGTTACATAAAATTAC+GGG - Chr7:26470414-26470433 MsG0780037468.01.T01:intron 30.0%
CTGTTCATTATACCATGTTA+TGG - Chr7:26468696-26468715 MsG0780037468.01.T01:intron 30.0%
CTTCCATGAATATCACATTT+CGG + Chr7:26471509-26471528 None:intergenic 30.0%
CTTCTCTCATATTTCAATTG+TGG - Chr7:26471438-26471457 MsG0780037468.01.T01:intron 30.0%
CTTGAGAAGAGTTTATAAAG+AGG - Chr7:26468177-26468196 MsG0780037468.01.T01:intron 30.0%
CTTTGTACGTACTGTATAAA+AGG - Chr7:26471750-26471769 MsG0780037468.01.T01:CDS 30.0%
GATGCTTCAGATAAATGAAT+AGG - Chr7:26469014-26469033 MsG0780037468.01.T01:intron 30.0%
GGAACAAATTTCAATCAAAG+GGG - Chr7:26469141-26469160 MsG0780037468.01.T01:CDS 30.0%
GGATCTGTAATGAATGTTAA+CGG - Chr7:26468414-26468433 MsG0780037468.01.T01:intron 30.0%
GTAATGAATGTTAACGGAAA+AGG - Chr7:26468420-26468439 MsG0780037468.01.T01:intron 30.0%
GTCTACTATGCTAAAATTAG+TGG + Chr7:26467248-26467267 None:intergenic 30.0%
TAAAAAAATCCCCCTCATTT+GGG - Chr7:26471041-26471060 MsG0780037468.01.T01:intron 30.0%
TAAGATCGTTATTCATGCAT+GGG + Chr7:26469425-26469444 None:intergenic 30.0%
TATATATTGCTATGACTGAC+TGG - Chr7:26472038-26472057 MsG0780037468.01.T01:CDS 30.0%
TATTTCAATTGTGGAATGTC+TGG - Chr7:26471447-26471466 MsG0780037468.01.T01:intron 30.0%
TCTGGTTACATAAAATTACG+GGG - Chr7:26470415-26470434 MsG0780037468.01.T01:intron 30.0%
TGCACATATCTAATTATACC+AGG - Chr7:26471877-26471896 MsG0780037468.01.T01:intron 30.0%
TGCTTCAGATAAATGAATAG+GGG - Chr7:26469016-26469035 MsG0780037468.01.T01:intron 30.0%
TGTCAAAATGACAAGAAAAG+TGG - Chr7:26470365-26470384 MsG0780037468.01.T01:intron 30.0%
TTACTCGCATCTATATAACT+TGG - Chr7:26470796-26470815 MsG0780037468.01.T01:intron 30.0%
TTAGTCTATTGTATCAGTGA+AGG - Chr7:26468828-26468847 MsG0780037468.01.T01:intron 30.0%
TTATGTTGTTGCATGATCAA+TGG + Chr7:26469913-26469932 None:intergenic 30.0%
TTGAGGATGTTGAAAACTAT+GGG - Chr7:26469675-26469694 MsG0780037468.01.T01:intron 30.0%
TTTGAGGATGTTGAAAACTA+TGG - Chr7:26469674-26469693 MsG0780037468.01.T01:intron 30.0%
TTTGCAACCCATGAAAATTA+GGG + Chr7:26468272-26468291 None:intergenic 30.0%
TTTGTGTCTACAGATAAAAG+AGG - Chr7:26470644-26470663 MsG0780037468.01.T01:intron 30.0%
! ATATTCTGTTCTTTTGTCGT+AGG - Chr7:26467114-26467133 MsG0780037468.01.T01:three_prime_UTR 30.0%
! ATTTTTACCTGAAGATTAGC+TGG + Chr7:26470777-26470796 None:intergenic 30.0%
! CATTCGATTACATAACTTGT+TGG - Chr7:26471699-26471718 MsG0780037468.01.T01:CDS 30.0%
! CCTTTGATTGAAATTTGTTC+CGG + Chr7:26469142-26469161 None:intergenic 30.0%
! CTACACCTTGTTATATTCAT+AGG + Chr7:26469890-26469909 None:intergenic 30.0%
! CTGAAATAGAAGATTTGCTT+TGG + Chr7:26467211-26467230 None:intergenic 30.0%
! GCTTGAATCTATGTCTTTTA+GGG - Chr7:26469744-26469763 MsG0780037468.01.T01:CDS 30.0%
! TATGAGAGAAGTCATTGATT+TGG + Chr7:26471429-26471448 None:intergenic 30.0%
! TGCTTGAATCTATGTCTTTT+AGG - Chr7:26469743-26469762 MsG0780037468.01.T01:CDS 30.0%
!! AAATATTGTGTCCTGGTTTT+AGG - Chr7:26469362-26469381 MsG0780037468.01.T01:intron 30.0%
!! AATTTGTTAGAAGCAAGTGT+TGG - Chr7:26468526-26468545 MsG0780037468.01.T01:CDS 30.0%
!! CAGCTTTATTTAATGGAAGT+AGG - Chr7:26468959-26468978 MsG0780037468.01.T01:intron 30.0%
!! GTAATAGTTTTACAGCTGTT+AGG - Chr7:26471563-26471582 MsG0780037468.01.T01:intron 30.0%
!! TTTCTTTTGGAGAGGAAATT+GGG - Chr7:26469607-26469626 MsG0780037468.01.T01:intron 30.0%
!! TTTTCTTTTGGAGAGGAAAT+TGG - Chr7:26469606-26469625 MsG0780037468.01.T01:intron 30.0%
!!! AATATTGTGTCCTGGTTTTA+GGG - Chr7:26469363-26469382 MsG0780037468.01.T01:intron 30.0%
!!! AGAGTTTTAACTAAGTCTGT+TGG - Chr7:26468759-26468778 MsG0780037468.01.T01:intron 30.0%
!!! ATTCATAGGTGTTTTAGGAA+AGG + Chr7:26469876-26469895 None:intergenic 30.0%
!!! CTTGTTATTTTCTTTTGGAG+AGG - Chr7:26469599-26469618 MsG0780037468.01.T01:intron 30.0%
!!! TTCATAGGTGTTTTAGGAAA+GGG + Chr7:26469875-26469894 None:intergenic 30.0%
AAAAAAATCCCCCTCATTTG+GGG - Chr7:26471042-26471061 MsG0780037468.01.T01:intron 35.0%
AAAATGACAAGAAAAGTGGC+TGG - Chr7:26470369-26470388 MsG0780037468.01.T01:intron 35.0%
AAATGACAAGAAAAGTGGCT+GGG - Chr7:26470370-26470389 MsG0780037468.01.T01:intron 35.0%
AAGCCCTATTCAATGTGATA+AGG - Chr7:26467757-26467776 MsG0780037468.01.T01:intron 35.0%
AATAACTAAGCAAAGTGACG+AGG + Chr7:26467705-26467724 None:intergenic 35.0%
ACTAATTGGCAACTCCAATT+GGG + Chr7:26467378-26467397 None:intergenic 35.0%
AGAAATGAAGAATTGGGAGA+GGG - Chr7:26470992-26471011 MsG0780037468.01.T01:intron 35.0%
AGGTATACGTAAGAAAGAAG+TGG - Chr7:26467794-26467813 MsG0780037468.01.T01:intron 35.0%
AGTGGATAAGAATCATTTGG+AGG - Chr7:26467176-26467195 MsG0780037468.01.T01:three_prime_UTR 35.0%
AGTTATTGGAAGAGTCTACT+AGG - Chr7:26467718-26467737 MsG0780037468.01.T01:intron 35.0%
ATAACTAAGCAAAGTGACGA+GGG + Chr7:26467704-26467723 None:intergenic 35.0%
ATAAGGCCCTAAGATAACTA+AGG - Chr7:26467774-26467793 MsG0780037468.01.T01:intron 35.0%
ATGTATGTGCAAATAGTGGT+TGG - Chr7:26467462-26467481 MsG0780037468.01.T01:CDS 35.0%
ATTCTTGGATGTTAAGAACC+AGG - Chr7:26468378-26468397 MsG0780037468.01.T01:intron 35.0%
ATTTGTTCCTCGATTTCCAA+AGG - Chr7:26470190-26470209 MsG0780037468.01.T01:intron 35.0%
CATCCGAAATGTGATATTCA+TGG - Chr7:26471503-26471522 MsG0780037468.01.T01:intron 35.0%
CCGGAACAAATTTCAATCAA+AGG - Chr7:26469139-26469158 MsG0780037468.01.T01:CDS 35.0%
CTAACTCATCCTTACAAAAC+CGG + Chr7:26468224-26468243 None:intergenic 35.0%
CTTAATTATAGGGACTGAAG+TGG + Chr7:26472126-26472145 None:intergenic 35.0%
GAAATTAAAGCTTCAGGAGA+GGG - Chr7:26470091-26470110 MsG0780037468.01.T01:intron 35.0%
GAAGGGAGAAATGAAGAATT+GGG - Chr7:26470986-26471005 MsG0780037468.01.T01:intron 35.0%
GAATTCTCTCAACCATAACA+TGG + Chr7:26468711-26468730 None:intergenic 35.0%
GACGGTAAAACAGATCTTAA+AGG + Chr7:26471622-26471641 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG - Chr7:26468180-26468199 MsG0780037468.01.T01:intron 35.0%
GGTATACGTAAGAAAGAAGT+GGG - Chr7:26467795-26467814 MsG0780037468.01.T01:intron 35.0%
GTATACGTAAGAAAGAAGTG+GGG - Chr7:26467796-26467815 MsG0780037468.01.T01:intron 35.0%
GTTCTTGAAGCACAAAGAAT+TGG - Chr7:26470897-26470916 MsG0780037468.01.T01:intron 35.0%
GTTGGATGTTATGAGATAAG+AGG - Chr7:26468855-26468874 MsG0780037468.01.T01:intron 35.0%
GTTTGCAACCCATGAAAATT+AGG + Chr7:26468273-26468292 None:intergenic 35.0%
TAATGGAAGTAGGCTCAATA+TGG - Chr7:26468969-26468988 MsG0780037468.01.T01:intron 35.0%
TACAGATAAAAGAGGAGCAA+TGG - Chr7:26470652-26470671 MsG0780037468.01.T01:intron 35.0%
TAGGGCGATTCATATTGTTT+GGG - Chr7:26470499-26470518 MsG0780037468.01.T01:intron 35.0%
TAGTGTTCTTTGTGCTTGTT+TGG - Chr7:26470860-26470879 MsG0780037468.01.T01:intron 35.0%
TATACGTAAGAAAGAAGTGG+GGG - Chr7:26467797-26467816 MsG0780037468.01.T01:intron 35.0%
TATGAGATAAGAGGATCTCT+TGG - Chr7:26468864-26468883 MsG0780037468.01.T01:intron 35.0%
TCAGAGTATACGAATAATCC+AGG - Chr7:26467430-26467449 MsG0780037468.01.T01:CDS 35.0%
TCCAAATGATTCTTATCCAC+TGG + Chr7:26467177-26467196 None:intergenic 35.0%
TCCAGTGGATAAGAATCATT+TGG - Chr7:26467173-26467192 MsG0780037468.01.T01:three_prime_UTR 35.0%
TCTGTGACATAGTCACTAAT+TGG + Chr7:26467392-26467411 None:intergenic 35.0%
TGAAATTAAAGCTTCAGGAG+AGG - Chr7:26470090-26470109 MsG0780037468.01.T01:intron 35.0%
TGATCCTTCTTTGCACTTAA+TGG + Chr7:26468475-26468494 None:intergenic 35.0%
TTAGCAAGTTAGGAAGATAC+TGG + Chr7:26468794-26468813 None:intergenic 35.0%
TTCGAATCCAATGTAACAGT+CGG + Chr7:26471673-26471692 None:intergenic 35.0%
! AAACATACCTTTGGAAATCG+AGG + Chr7:26470200-26470219 None:intergenic 35.0%
! AGAAGATTTGCTTTGGTATG+AGG + Chr7:26467204-26467223 None:intergenic 35.0%
! GAAGATTTGCTTTGGTATGA+GGG + Chr7:26467203-26467222 None:intergenic 35.0%
! GCACAATTTTATTGAAGCCA+GGG + Chr7:26469270-26469289 None:intergenic 35.0%
! GTAAAGAGCCTTCATCTTTT+GGG - Chr7:26468446-26468465 MsG0780037468.01.T01:intron 35.0%
! TAAAGAGCCTTCATCTTTTG+GGG - Chr7:26468447-26468466 MsG0780037468.01.T01:intron 35.0%
! TCGTCACTTTGCTTAGTTAT+TGG - Chr7:26467704-26467723 MsG0780037468.01.T01:intron 35.0%
!! ACCACTTTAAGACTATTGTC+CGG - Chr7:26469120-26469139 MsG0780037468.01.T01:CDS 35.0%
!! AGAACCAGGCTTTTAAAAAC+AGG - Chr7:26468392-26468411 MsG0780037468.01.T01:intron 35.0%
!! ATTCTCTTGTAACGGGTATA+GGG - Chr7:26467921-26467940 MsG0780037468.01.T01:intron 35.0%
!! GAACCAGGCTTTTAAAAACA+GGG - Chr7:26468393-26468412 MsG0780037468.01.T01:intron 35.0%
!! GAAGTCATTGATTTGGAAGT+AGG + Chr7:26471422-26471441 None:intergenic 35.0%
!! TGAGGGACAGCTTTATTTAA+TGG - Chr7:26468952-26468971 MsG0780037468.01.T01:intron 35.0%
!! TGGGGGGTTTTATAGAAAAA+TGG + Chr7:26471236-26471255 None:intergenic 35.0%
!! TTCTGATTTGCTTATGTAGC+AGG + Chr7:26471842-26471861 None:intergenic 35.0%
!! TTCTTTTGGAGAGGAAATTG+GGG - Chr7:26469608-26469627 MsG0780037468.01.T01:intron 35.0%
AAAAAATCCCCCTCATTTGG+GGG - Chr7:26471043-26471062 MsG0780037468.01.T01:intron 40.0%
AAATGAAGAATTGGGAGAGG+GGG - Chr7:26470994-26471013 MsG0780037468.01.T01:intron 40.0%
AAGAGTTGCTAGATATTCCC+AGG - Chr7:26469481-26469500 MsG0780037468.01.T01:intron 40.0%
AATGGTGAAAAGACAAACCC+TGG - Chr7:26469250-26469269 MsG0780037468.01.T01:intron 40.0%
ACCATCAGAAATCATCGACA+TGG - Chr7:26468351-26468370 MsG0780037468.01.T01:intron 40.0%
ACCTGACCTTTCTTCTTTCT+GGG - Chr7:26467549-26467568 MsG0780037468.01.T01:CDS 40.0%
AGAGTAAGGCTGATTGCTTA+TGG + Chr7:26468678-26468697 None:intergenic 40.0%
AGAGTTGCTAGATATTCCCA+GGG - Chr7:26469482-26469501 MsG0780037468.01.T01:intron 40.0%
AGATAAAAGAGGAGCAATGG+TGG - Chr7:26470655-26470674 MsG0780037468.01.T01:intron 40.0%
ATGGGTACGCTGAAGAAAAA+TGG - Chr7:26469634-26469653 MsG0780037468.01.T01:intron 40.0%
CAAACAATATGAATCGCCCT+AGG + Chr7:26470500-26470519 None:intergenic 40.0%
CAACCATAAACCCTAAAACC+AGG + Chr7:26469376-26469395 None:intergenic 40.0%
CAAGCACAAAGAACACTAGT+AGG + Chr7:26470858-26470877 None:intergenic 40.0%
CAATATGCCAATAGTGGTAC+TGG - Chr7:26468634-26468653 MsG0780037468.01.T01:intron 40.0%
CACTAATTGGCAACTCCAAT+TGG + Chr7:26467379-26467398 None:intergenic 40.0%
CTAGGGCGATTCATATTGTT+TGG - Chr7:26470498-26470517 MsG0780037468.01.T01:intron 40.0%
GAAATGAAGAATTGGGAGAG+GGG - Chr7:26470993-26471012 MsG0780037468.01.T01:intron 40.0%
GACTGTCATTGGAAATTTCC+CGG - Chr7:26469515-26469534 MsG0780037468.01.T01:intron 40.0%
GAGAAATGAAGAATTGGGAG+AGG - Chr7:26470991-26471010 MsG0780037468.01.T01:intron 40.0%
GAGAGTGATTCTCTTGTAAC+GGG - Chr7:26467914-26467933 MsG0780037468.01.T01:intron 40.0%
GCACAAAGAATTGGACACTA+AGG - Chr7:26470906-26470925 MsG0780037468.01.T01:intron 40.0%
GGAACTCAAAATTGCATTGG+GGG - Chr7:26471064-26471083 MsG0780037468.01.T01:intron 40.0%
GGAAGGGAGAAATGAAGAAT+TGG - Chr7:26470985-26471004 MsG0780037468.01.T01:intron 40.0%
GGAGAAAGTTAGATATCCAG+TGG - Chr7:26467158-26467177 MsG0780037468.01.T01:three_prime_UTR 40.0%
GGAGAGTGATTCTCTTGTAA+CGG - Chr7:26467913-26467932 MsG0780037468.01.T01:intron 40.0%
GGGAACTCAAAATTGCATTG+GGG - Chr7:26471063-26471082 MsG0780037468.01.T01:intron 40.0%
GGGGAACTCAAAATTGCATT+GGG - Chr7:26471062-26471081 MsG0780037468.01.T01:intron 40.0%
GTGTGTGTGTGTCTAGATTT+AGG + Chr7:26469307-26469326 None:intergenic 40.0%
TAGGGAATATGCATTGTAGG+AGG - Chr7:26467947-26467966 MsG0780037468.01.T01:intron 40.0%
TCAGCAGTTAGTTACACAAG+TGG + Chr7:26467871-26467890 None:intergenic 40.0%
TGAATGTTAACGGAAAAGGG+TGG - Chr7:26468424-26468443 MsG0780037468.01.T01:intron 40.0%
TGGAAAAAAGGAAGGAGGAA+GGG - Chr7:26470969-26470988 MsG0780037468.01.T01:intron 40.0%
TGTAACTCCAGCTAATCTTC+AGG - Chr7:26470767-26470786 MsG0780037468.01.T01:intron 40.0%
TGTGTAACTAACTGCTGAGT+TGG - Chr7:26467873-26467892 MsG0780037468.01.T01:intron 40.0%
TTAGGGTTTATGGTTGGACA+AGG - Chr7:26469380-26469399 MsG0780037468.01.T01:intron 40.0%
TTCTTGTACAAGAGCTGAGA+GGG + Chr7:26470824-26470843 None:intergenic 40.0%
TTGCATGCATCTTCTGCAAA+TGG - Chr7:26467502-26467521 MsG0780037468.01.T01:CDS 40.0%
TTGGAAAAAAGGAAGGAGGA+AGG - Chr7:26470968-26470987 MsG0780037468.01.T01:intron 40.0%
! AAAGAGCCTTCATCTTTTGG+GGG - Chr7:26468448-26468467 MsG0780037468.01.T01:intron 40.0%
! AGGGCCTTATCACATTGAAT+AGG + Chr7:26467764-26467783 None:intergenic 40.0%
! ATGGAGAGTTTTCGATGCAA+AGG + Chr7:26468610-26468629 None:intergenic 40.0%
! ATGGGTTGCAAACCTTTCAT+GGG - Chr7:26468280-26468299 MsG0780037468.01.T01:intron 40.0%
! CACTTTTACATCCTGCAAGA+CGG + Chr7:26471640-26471659 None:intergenic 40.0%
! CGCACAATTTTATTGAAGCC+AGG + Chr7:26469271-26469290 None:intergenic 40.0%
! GGGCCTTATCACATTGAATA+GGG + Chr7:26467763-26467782 None:intergenic 40.0%
! GGTAAAGAGCCTTCATCTTT+TGG - Chr7:26468445-26468464 MsG0780037468.01.T01:intron 40.0%
! TATACTGGCTAACACTGACT+TGG - Chr7:26471775-26471794 MsG0780037468.01.T01:CDS 40.0%
! TCCGGACAATAGTCTTAAAG+TGG + Chr7:26469124-26469143 None:intergenic 40.0%
! TCTTCTGCAAATGGTAATGC+AGG - Chr7:26467511-26467530 MsG0780037468.01.T01:CDS 40.0%
! TGAAGATTAGCTGGAGTTAC+AGG + Chr7:26470768-26470787 None:intergenic 40.0%
! TGAGCACATGCTTCTTTTTG+AGG - Chr7:26469658-26469677 MsG0780037468.01.T01:intron 40.0%
!! CATCGACATGGCTTTATTCT+TGG - Chr7:26468363-26468382 MsG0780037468.01.T01:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - Chr7:26468222-26468241 MsG0780037468.01.T01:intron 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG - Chr7:26468120-26468139 MsG0780037468.01.T01:intron 40.0%
!! CTTCCTAACTTGCTAAGAGA+GGG - Chr7:26468798-26468817 MsG0780037468.01.T01:intron 40.0%
!! GATTCTCTTGTAACGGGTAT+AGG - Chr7:26467920-26467939 MsG0780037468.01.T01:intron 40.0%
!! GCAGTCTCATTTTTCCCAAT+TGG - Chr7:26467361-26467380 MsG0780037468.01.T01:three_prime_UTR 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG - Chr7:26470924-26470943 MsG0780037468.01.T01:intron 40.0%
!! TCTTCCTAACTTGCTAAGAG+AGG - Chr7:26468797-26468816 MsG0780037468.01.T01:intron 40.0%
!! TGGACACTAAGGCTTTGTTT+GGG - Chr7:26470917-26470936 MsG0780037468.01.T01:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG + Chr7:26471277-26471296 None:intergenic 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG - Chr7:26468121-26468140 MsG0780037468.01.T01:intron 40.0%
!! TTCCTAACTTGCTAAGAGAG+GGG - Chr7:26468799-26468818 MsG0780037468.01.T01:intron 40.0%
!! TTCTCTTGTAACGGGTATAG+GGG - Chr7:26467922-26467941 MsG0780037468.01.T01:intron 40.0%
!! TTGGACACTAAGGCTTTGTT+TGG - Chr7:26470916-26470935 MsG0780037468.01.T01:intron 40.0%
!!! ATTTTGAGTTCCCCCAAATG+AGG + Chr7:26471056-26471075 None:intergenic 40.0%
!!! CTGGTTTTAGGGTTTATGGT+TGG - Chr7:26469374-26469393 MsG0780037468.01.T01:intron 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG - Chr7:26470961-26470980 MsG0780037468.01.T01:intron 40.0%
!!! GATCCCTGTTTTTAAAAGCC+TGG + Chr7:26468399-26468418 None:intergenic 40.0%
!!! GGTTTTGGAAAAAAGGAAGG+AGG - Chr7:26470964-26470983 MsG0780037468.01.T01:intron 40.0%
!!! TGTCCTGGTTTTAGGGTTTA+TGG - Chr7:26469370-26469389 MsG0780037468.01.T01:intron 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG + Chr7:26471055-26471074 None:intergenic 40.0%
AAAAGAGGAGCAATGGTGGT+TGG - Chr7:26470659-26470678 MsG0780037468.01.T01:intron 45.0%
AATGGTCCCCCAAAAGATGA+AGG + Chr7:26468457-26468476 None:intergenic 45.0%
ACCTGGTACAATCTTGAAGC+CGG + Chr7:26469537-26469556 None:intergenic 45.0%
ACTCAAAATTGCATTGGGGG+AGG - Chr7:26471067-26471086 MsG0780037468.01.T01:intron 45.0%
ACTGCTTCCAAAATTGCCCT+TGG - Chr7:26471337-26471356 MsG0780037468.01.T01:intron 45.0%
AGCATATAGCTCAGACGTAG+AGG + Chr7:26470697-26470716 None:intergenic 45.0%
AGCCAATAGTCTTTGTGCAG+AGG - Chr7:26471727-26471746 MsG0780037468.01.T01:CDS 45.0%
AGCCTCTGCACAAAGACTAT+TGG + Chr7:26471732-26471751 None:intergenic 45.0%
CAACAGCCCAGAAAGAAGAA+AGG + Chr7:26467558-26467577 None:intergenic 45.0%
CACATACATCAATCATGGCC+TGG + Chr7:26467451-26467470 None:intergenic 45.0%
CACCTGACCTTTCTTCTTTC+TGG - Chr7:26467548-26467567 MsG0780037468.01.T01:CDS 45.0%
CCTCAAAGCCAACACAATGA+AGG + Chr7:26468122-26468141 None:intergenic 45.0%
CTAACCAAAGGCCGCAATTA+AGG + Chr7:26468078-26468097 None:intergenic 45.0%
CTAGTCTCCGACTGTTACAT+TGG - Chr7:26471663-26471682 MsG0780037468.01.T01:CDS 45.0%
CTCAAAATTGCATTGGGGGA+GGG - Chr7:26471068-26471087 MsG0780037468.01.T01:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG - Chr7:26468111-26468130 MsG0780037468.01.T01:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG + Chr7:26468090-26468109 None:intergenic 45.0%
CTTCTTGTACAAGAGCTGAG+AGG + Chr7:26470825-26470844 None:intergenic 45.0%
GAGAGGAAATTGGGGAACAT+GGG - Chr7:26469616-26469635 MsG0780037468.01.T01:intron 45.0%
GAGGGAAGTTCTGTAAATCC+TGG + Chr7:26470061-26470080 None:intergenic 45.0%
GAGTGCTATCTATCCGATGT+GGG + Chr7:26468158-26468177 None:intergenic 45.0%
GCCATGTCGATGATTTCTGA+TGG + Chr7:26468355-26468374 None:intergenic 45.0%
GCTAAAAGAGGTGATATGCC+TGG + Chr7:26469992-26470011 None:intergenic 45.0%
GGAATATGCATTGTAGGAGG+TGG - Chr7:26467950-26467969 MsG0780037468.01.T01:intron 45.0%
GGGACCATTAAGTGCAAAGA+AGG - Chr7:26468468-26468487 MsG0780037468.01.T01:intron 45.0%
GGGGGAACTCAAAATTGCAT+TGG - Chr7:26471061-26471080 MsG0780037468.01.T01:intron 45.0%
GGGTAGGGAATATGCATTGT+AGG - Chr7:26467944-26467963 MsG0780037468.01.T01:intron 45.0%
TGGACAAGGACTCTTCATTG+TGG - Chr7:26469394-26469413 MsG0780037468.01.T01:intron 45.0%
TGTATCAGTGAAGGACACGT+TGG - Chr7:26468837-26468856 MsG0780037468.01.T01:intron 45.0%
TTCTGTAGCTGCAAATGTCC+TGG + Chr7:26471898-26471917 None:intergenic 45.0%
! ACCTTTCATGGGTTGCAAAC+CGG - Chr7:26468291-26468310 MsG0780037468.01.T01:intron 45.0%
! AGAGTGCTATCTATCCGATG+TGG + Chr7:26468159-26468178 None:intergenic 45.0%
! AGCCAACACAATGAAGGTGT+TGG + Chr7:26468116-26468135 None:intergenic 45.0%
! CATGGGTTGCAAACCTTTCA+TGG - Chr7:26468279-26468298 MsG0780037468.01.T01:intron 45.0%
! CTATGCTCCAAGGGCAATTT+TGG + Chr7:26471347-26471366 None:intergenic 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - Chr7:26470929-26470948 MsG0780037468.01.T01:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + Chr7:26470948-26470929 None:intergenic 45.0%
! GATCTGTTTTACCGTCTTGC+AGG - Chr7:26471626-26471645 MsG0780037468.01.T01:intron 45.0%
! GTAACTAACTGCTGAGTTGG+CGG - Chr7:26467876-26467895 MsG0780037468.01.T01:intron 45.0%
! TATGCCAATAGTGGTACTGG+TGG - Chr7:26468637-26468656 MsG0780037468.01.T01:intron 45.0%
! TTTGAGTTCCCCCAAATGAG+GGG + Chr7:26471054-26471073 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG + Chr7:26468113-26468132 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + Chr7:26468215-26468234 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - Chr7:26468212-26468231 MsG0780037468.01.T01:intron 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG - Chr7:26468119-26468138 MsG0780037468.01.T01:intron 45.0%
!! GCTGGGCTTGTTAGATCTAA+TGG - Chr7:26469232-26469251 MsG0780037468.01.T01:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - Chr7:26470928-26470947 MsG0780037468.01.T01:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + Chr7:26470947-26470928 None:intergenic 45.0%
!! GTGTTGGTGCTAGTAGATTG+TGG - Chr7:26468542-26468561 MsG0780037468.01.T01:CDS 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG - Chr7:26468122-26468141 MsG0780037468.01.T01:intron 45.0%
!! TCTCTTGTAACGGGTATAGG+GGG - Chr7:26467923-26467942 MsG0780037468.01.T01:intron 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG - Chr7:26470957-26470976 MsG0780037468.01.T01:intron 45.0%
!!! TTATAAATATATATTTTTGA+AGG - Chr7:26472061-26472080 MsG0780037468.01.T01:CDS 5.0%
AAGCTTCAGGAGAGGGAAAC+TGG - Chr7:26470098-26470117 MsG0780037468.01.T01:intron 50.0%
CACACACACACACACACATC+TGG - Chr7:26469316-26469335 MsG0780037468.01.T01:intron 50.0%
CCTGGTACAATCTTGAAGCC+GGG + Chr7:26469536-26469555 None:intergenic 50.0%
GCCCAGAAAGAAGAAAGGTC+AGG + Chr7:26467553-26467572 None:intergenic 50.0%
GGAGAGGAAATTGGGGAACA+TGG - Chr7:26469615-26469634 MsG0780037468.01.T01:intron 50.0%
GGGGCCATACTAATGCAACA+AGG - Chr7:26469035-26469054 MsG0780037468.01.T01:intron 50.0%
GTCCCCTCTCTTAGCAAGTT+AGG + Chr7:26468804-26468823 None:intergenic 50.0%
TATGCATTGTAGGAGGTGGC+TGG - Chr7:26467954-26467973 MsG0780037468.01.T01:intron 50.0%
TGCTTATGGCGAACAACCTC+TGG + Chr7:26468664-26468683 None:intergenic 50.0%
TGGACCACCAGTACCACTAT+TGG + Chr7:26468644-26468663 None:intergenic 50.0%
TTGAGTTCCCCCAAATGAGG+GGG + Chr7:26471053-26471072 None:intergenic 50.0%
! AAAGAAGTGGGGGTGCGATT+TGG - Chr7:26467807-26467826 MsG0780037468.01.T01:intron 50.0%
! AAGAAGTGGGGGTGCGATTT+GGG - Chr7:26467808-26467827 MsG0780037468.01.T01:intron 50.0%
! AGGAGGTGGCTGGTACTTTT+GGG - Chr7:26467964-26467983 MsG0780037468.01.T01:intron 50.0%
! ATTGCATTGGGGGAGGGTTT+TGG - Chr7:26471074-26471093 MsG0780037468.01.T01:intron 50.0%
! GAGCAATGGTGGTTGGTTCT+TGG - Chr7:26470666-26470685 MsG0780037468.01.T01:intron 50.0%
! GGGTGGATTTAGTCCCACAT+CGG - Chr7:26468142-26468161 MsG0780037468.01.T01:intron 50.0%
! TAGGAGGTGGCTGGTACTTT+TGG - Chr7:26467963-26467982 MsG0780037468.01.T01:intron 50.0%
! TTGCATTGGGGGAGGGTTTT+GGG - Chr7:26471075-26471094 MsG0780037468.01.T01:intron 50.0%
!! ACCGGTTTGCAACCCATGAA+AGG + Chr7:26468295-26468314 None:intergenic 50.0%
!! ACTCAGCTTGCTATGCTCCA+AGG + Chr7:26471357-26471376 None:intergenic 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + Chr7:26468210-26468229 None:intergenic 50.0%
!! CTCAGCTTGCTATGCTCCAA+GGG + Chr7:26471356-26471375 None:intergenic 50.0%
!! CTCTTGTAACGGGTATAGGG+GGG - Chr7:26467924-26467943 MsG0780037468.01.T01:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - Chr7:26470927-26470946 MsG0780037468.01.T01:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + Chr7:26470946-26470927 None:intergenic 50.0%
AGGCCGCAATTAAGGCGACT+AGG + Chr7:26468070-26468089 None:intergenic 55.0%
CCCGGCTTCAAGATTGTACC+AGG - Chr7:26469533-26469552 MsG0780037468.01.T01:intron 55.0%
CTTCAGGAGAGGGAAACTGG+TGG - Chr7:26470101-26470120 MsG0780037468.01.T01:intron 55.0%
GCAATTAAGGCGACTAGGGG+CGG + Chr7:26468065-26468084 None:intergenic 55.0%
GCACTCCTCACCTTACAAGC+CGG - Chr7:26468202-26468221 MsG0780037468.01.T01:intron 55.0%
GCAGCGTTGCAGACTGTCAT+TGG - Chr7:26469504-26469523 MsG0780037468.01.T01:intron 55.0%
GCCCCTAGTCGCCTTAATTG+CGG - Chr7:26468064-26468083 MsG0780037468.01.T01:intron 55.0%
GCCGCAATTAAGGCGACTAG+GGG + Chr7:26468068-26468087 None:intergenic 55.0%
GGCCGCAATTAAGGCGACTA+GGG + Chr7:26468069-26468088 None:intergenic 55.0%
GTCGCCTTAATTGCGGCCTT+TGG - Chr7:26468071-26468090 MsG0780037468.01.T01:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - Chr7:26470933-26470952 MsG0780037468.01.T01:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + Chr7:26470952-26470933 None:intergenic 55.0%
TGAAGAATTGGGAGAGGGGG+AGG - Chr7:26470997-26471016 MsG0780037468.01.T01:intron 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - Chr7:26470932-26470951 MsG0780037468.01.T01:intron 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + Chr7:26470951-26470932 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - Chr7:26470934-26470953 MsG0780037468.01.T01:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + Chr7:26470953-26470934 None:intergenic 55.0%
! AGAGGGAAACTGGTGGTGAG+AGG - Chr7:26470108-26470127 MsG0780037468.01.T01:intron 55.0%
! GGGGTGCGATTTGGGAGATT+AGG - Chr7:26467816-26467835 MsG0780037468.01.T01:intron 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG + Chr7:26468101-26468120 None:intergenic 55.0%
!! CTAGGGGCGGACTGCAATTA+AGG + Chr7:26468052-26468071 None:intergenic 55.0%
!! GTAACGGGTATAGGGGGGTA+GGG - Chr7:26467929-26467948 MsG0780037468.01.T01:intron 55.0%
!! TAGTGGTACTGGTGGTCCAG+AGG - Chr7:26468645-26468664 MsG0780037468.01.T01:intron 55.0%
!! TGTAACGGGTATAGGGGGGT+AGG - Chr7:26467928-26467947 MsG0780037468.01.T01:intron 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG - Chr7:26468125-26468144 MsG0780037468.01.T01:intron 55.0%
AATTGGGAGAGGGGGAGGCT+GGG - Chr7:26471002-26471021 MsG0780037468.01.T01:intron 60.0%
ACAGTCTGCAACGCTGCCCT+GGG + Chr7:26469501-26469520 None:intergenic 60.0%
GCTGTCCCTCAGCTGTTGCT+TGG + Chr7:26468943-26468962 None:intergenic 60.0%
GGCCTCCAAGCAACAGCTGA+GGG - Chr7:26468935-26468954 MsG0780037468.01.T01:intron 60.0%
TCACTCTCCCACAACCCTCC+CGG + Chr7:26467902-26467921 None:intergenic 60.0%
TGGCCTCCAAGCAACAGCTG+AGG - Chr7:26468934-26468953 MsG0780037468.01.T01:intron 60.0%
TTGGGAGTTTGGAGGGGAGG+GGG + Chr7:26470954-26470935 None:intergenic 60.0%
! CTAACTGCTGAGTTGGCGGC+CGG - Chr7:26467880-26467899 MsG0780037468.01.T01:intron 60.0%
! GTCCCTCAGCTGTTGCTTGG+AGG + Chr7:26468940-26468959 None:intergenic 60.0%
! TAACTGCTGAGTTGGCGGCC+GGG - Chr7:26467881-26467900 MsG0780037468.01.T01:intron 60.0%
! TCAGCTGTTGCTTGGAGGCC+AGG + Chr7:26468935-26468954 None:intergenic 60.0%
!! GGGGCGGACTGCAATTAAGG+CGG + Chr7:26468049-26468068 None:intergenic 60.0%
ATTGGGAGAGGGGGAGGCTG+GGG - Chr7:26471003-26471022 MsG0780037468.01.T01:intron 65.0%
GAATTGGGAGAGGGGGAGGC+TGG - Chr7:26471001-26471020 MsG0780037468.01.T01:intron 65.0%
GACAGTCTGCAACGCTGCCC+TGG + Chr7:26469502-26469521 None:intergenic 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG - Chr7:26470939-26470958 MsG0780037468.01.T01:intron 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG - Chr7:26470938-26470957 MsG0780037468.01.T01:intron 65.0%
TGGGAGTTTGGAGGGGAGGG+GGG + Chr7:26470955-26470936 None:intergenic 65.0%
AGGGGAGGGGGGAGGCTTTG+GGG + Chr7:26471254-26471273 None:intergenic 70.0%
GAGGGGAGGGGGGAGGCTTT+GGG + Chr7:26471255-26471274 None:intergenic 70.0%
GAGTTTGGAGGGGAGGGGGG+AGG + Chr7:26471262-26471281 None:intergenic 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG - Chr7:26470937-26470956 MsG0780037468.01.T01:intron 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG - Chr7:26470943-26470962 MsG0780037468.01.T01:intron 70.0%
TTGGCGGCCGGGAGGGTTGT+GGG - Chr7:26467892-26467911 MsG0780037468.01.T01:intron 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG - Chr7:26470942-26470961 MsG0780037468.01.T01:intron 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG - Chr7:26470949-26470968 MsG0780037468.01.T01:intron 70.0%
! TGCTGAGTTGGCGGCCGGGA+GGG - Chr7:26467885-26467904 MsG0780037468.01.T01:intron 70.0%
GGAGGGGAGGGGGGAGGCTT+TGG + Chr7:26471256-26471275 None:intergenic 75.0%
GTTGGCGGCCGGGAGGGTTG+TGG - Chr7:26467891-26467910 MsG0780037468.01.T01:intron 75.0%
! CTGCTGAGTTGGCGGCCGGG+AGG - Chr7:26467884-26467903 MsG0780037468.01.T01:intron 75.0%
! GGGGAGGGGGGAGGCTTTGG+GGG + Chr7:26471253-26471272 None:intergenic 75.0%
!! GGGAGGGGGGAGGCTTTGGG+GGG + Chr7:26471252-26471271 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 26467099 26472161 26467099 ID=MsG0780037468.01;Name=MsG0780037468.01
Chr7 mRNA 26467099 26472161 26467099 ID=MsG0780037468.01.T01;Parent=MsG0780037468.01;Name=MsG0780037468.01.T01;_AED=0.49;_eAED=0.54;_QI=0|0.5|0.57|1|0.5|0.71|7|311|368
Chr7 exon 26467099 26467612 26467099 ID=MsG0780037468.01.T01:exon:3092;Parent=MsG0780037468.01.T01
Chr7 exon 26468296 26468368 26468296 ID=MsG0780037468.01.T01:exon:3091;Parent=MsG0780037468.01.T01
Chr7 exon 26468472 26468603 26468472 ID=MsG0780037468.01.T01:exon:3090;Parent=MsG0780037468.01.T01
Chr7 exon 26469049 26469198 26469049 ID=MsG0780037468.01.T01:exon:3089;Parent=MsG0780037468.01.T01
Chr7 exon 26469706 26469876 26469706 ID=MsG0780037468.01.T01:exon:3088;Parent=MsG0780037468.01.T01
Chr7 exon 26471650 26471895 26471650 ID=MsG0780037468.01.T01:exon:3087;Parent=MsG0780037468.01.T01
Chr7 exon 26472030 26472161 26472030 ID=MsG0780037468.01.T01:exon:3086;Parent=MsG0780037468.01.T01
Chr7 CDS 26472030 26472161 26472030 ID=MsG0780037468.01.T01:cds;Parent=MsG0780037468.01.T01
Chr7 CDS 26471650 26471895 26471650 ID=MsG0780037468.01.T01:cds;Parent=MsG0780037468.01.T01
Chr7 CDS 26469706 26469876 26469706 ID=MsG0780037468.01.T01:cds;Parent=MsG0780037468.01.T01
Chr7 CDS 26469049 26469198 26469049 ID=MsG0780037468.01.T01:cds;Parent=MsG0780037468.01.T01
Chr7 CDS 26468472 26468603 26468472 ID=MsG0780037468.01.T01:cds;Parent=MsG0780037468.01.T01
Chr7 CDS 26468296 26468368 26468296 ID=MsG0780037468.01.T01:cds;Parent=MsG0780037468.01.T01
Chr7 CDS 26467410 26467612 26467410 ID=MsG0780037468.01.T01:cds;Parent=MsG0780037468.01.T01
Chr7 three_prime_UTR 26467099 26467409 26467099 ID=MsG0780037468.01.T01:three_prime_utr;Parent=MsG0780037468.01.T01
Gene Sequence

>MsG0780037468.01.T01

ATGAAGTCATTGACAATATTCTGTTCTTTTGTCGTAGGAAAAAACAATGAAGCACTATCGGAGAAAGTTAGATATCCAGTGGATAAGAATCATTTGGAGGACCCTCATACCAAAGCAAATCTTCTATTTCAGTCTCATTTTTCCCAATTGGAGTTGCCAATTAGTGACTATGTCACAGACTTGAAATCAGTATTAGATCAGAGTATACGAATAATCCAGGCCATGATTGATGTATGTGCAAATAGTGGTTGGCTTTCGAGCTCTATAACTTGCATGCATCTTCTGCAAATGGTAATGCAGGTAATAAATTTTCTGCACCTGACCTTTCTTCTTTCTGGGCTGTTGTATAATTTGAATACAACTAGCAAGTTCAAGTTAGGTTTATGGTTGGACAAGGACTCTTCATTGTGGATGCTCCCATGCATGAATAACGATCTTATAACTTCACTTAGCAAAAGAGGAATTTATAGTTTACAAGAGTTGCTAGATATTCCCAGGGCAGCGTTGCAGACTGTCATTGGAAATTTCCCGGCTTCAAGATTGTACCAGGATTTACAGAACTTCCCTCATGTTAAAATGAAATTAAAGCTTCAGGAGAGGGAAACTGGTGGTGAGAGGTGCTACATATTACACATTAGATTAGAAAAGCTCAATTCTAGACGACACTCATCTAGAGCATTTGTTCCTCGATTTCCAAAGATAAAAGAGGAGCAATGGTGGTTGGTTCTTGGTAATACCTCTACGTCTGAGCTATATGCTCTGAAAAGAGTTTCTTTTTCGGATCACTTAGTTACATCGATGAAGTTGCCTGTAACTCCAGCTAATCTTCAGTATCAGTTCTTGAAGCACAAAGAATTGGACACTAAGGCTTTGTTTGGGAGTTTGGAGGGGAGGGGAGGGGAGGGATGTAAAAGTGACTCTAGTCTCCGACTGTTACATTGGATTCGAACAAGAGCATTCGATTACATAACTTGTTGGATGTCAGCCAATAGTCTTTGTGCAGAGGCTTTGTACGTACTGTATAAAAGGATTATACTGGCTAACACTGACTTGGTATACCTTCAAATCAAAGATTTCTTCAATCACTATGTTCTACCTGCTACATAA
Protein sequence

>MsG0780037468.01.T01

MKSLTIFCSFVVGKNNEALSEKVRYPVDKNHLEDPHTKANLLFQSHFSQLELPISDYVTDLKSVLDQSIRIIQAMIDVCANSGWLSSSITCMHLLQMVMQVINFLHLTFLLSGLLYNLNTTSKFKLGLWLDKDSSLWMLPCMNNDLITSLSKRGIYSLQELLDIPRAALQTVIGNFPASRLYQDLQNFPHVKMKLKLQERETGGERCYILHIRLEKLNSRRHSSRAFVPRFPKIKEEQWWLVLGNTSTSELYALKRVSFSDHLVTSMKLPVTPANLQYQFLKHKELDTKALFGSLEGRGGEGCKSDSSLRLLHWIRTRAFDYITCWMSANSLCAEALYVLYKRIILANTDLVYLQIKDFFNHYVLPAT*