Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037513.01.T01 | XP_017252664.1 | 60.235 | 425 | 159 | 5 | 21 | 437 | 20 | 442 | 0 | 522 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037513.01.T01 | A0A392LYG7 | 65.217 | 161 | 47 | 4 | 1 | 158 | 1 | 155 | 2.10e-47 | 170 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004806.01 | MsG0780037513.01 | 0.800484 | 1.410558e-48 | 6.575541e-46 |
| MsG0280006420.01 | MsG0780037513.01 | 0.806618 | 7.536383e-50 | 4.109259e-47 |
| MsG0480018919.01 | MsG0780037513.01 | 0.802578 | 5.249238e-49 | 2.580465e-46 |
| MsG0480022971.01 | MsG0780037513.01 | 0.813467 | 2.522627e-51 | 1.648752e-48 |
| MsG0580024035.01 | MsG0780037513.01 | 0.814014 | 1.911291e-51 | 1.267809e-48 |
| MsG0780037513.01 | MsG0780040896.01 | 0.821937 | 3.095409e-53 | 2.554021e-50 |
| MsG0780037513.01 | MsG0880041883.01 | 0.803798 | 2.935047e-49 | 1.488655e-46 |
| MsG0780037513.01 | MsG0880045118.01 | 0.826613 | 2.464712e-54 | 2.322931e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 78 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTTTCTTGGTTATTATTT+TGG | 0.102182 | 7:+27292158 | None:intergenic |
| AATATATTTACTTCAATTAT+TGG | 0.153149 | 7:-27292036 | MsG0780037513.01.T01:CDS |
| GAATCAAACATTCCTTTAAT+AGG | 0.169981 | 7:-27292514 | MsG0780037513.01.T01:CDS |
| GTCAATAATATTTCTAGATT+TGG | 0.190071 | 7:+27292214 | None:intergenic |
| TATGGCCGTGGTCGTGGATA+TGG | 0.200353 | 7:-27292562 | MsG0780037513.01.T01:CDS |
| ATCTCCAAAACCAAAGAATT+TGG | 0.206503 | 7:+27291741 | None:intergenic |
| AATTCCAAATTCTTTGGTTT+TGG | 0.233671 | 7:-27291745 | MsG0780037513.01.T01:CDS |
| AAAGCTACTTGTGTAATTAA+AGG | 0.240382 | 7:+27291812 | None:intergenic |
| TATTGACCAACCGTCATTAT+TGG | 0.246996 | 7:+27292291 | None:intergenic |
| AACCACGCATGTTTATTCTT+AGG | 0.251065 | 7:+27291971 | None:intergenic |
| AAAAGTTTATAAAACTTTCT+TGG | 0.259317 | 7:+27292146 | None:intergenic |
| GGTGAATGACAACCCCTTAT+AGG | 0.262062 | 7:-27292603 | None:intergenic |
| AATCAAACATTCCTTTAATA+GGG | 0.270255 | 7:-27292513 | MsG0780037513.01.T01:CDS |
| TTAGTAAATTCCAAATTCTT+TGG | 0.281702 | 7:-27291751 | MsG0780037513.01.T01:CDS |
| CCACGGCCTCTGCCCCTATA+AGG | 0.285557 | 7:+27292589 | None:intergenic |
| AGCTATTGCTTTAATATCTT+CGG | 0.287996 | 7:+27291634 | None:intergenic |
| ATATATTTACTTCAATTATT+GGG | 0.319222 | 7:-27292035 | MsG0780037513.01.T01:CDS |
| GTGAATGACAACCCCTTATA+GGG | 0.321341 | 7:-27292602 | None:intergenic |
| CACCAGTCATAAAACCAATT+TGG | 0.322181 | 7:+27291911 | None:intergenic |
| TACAAAATTTGTATACTTCA+TGG | 0.329117 | 7:-27291847 | MsG0780037513.01.T01:CDS |
| GCTTTGTGTAAAATGATTAC+TGG | 0.334687 | 7:-27291794 | MsG0780037513.01.T01:CDS |
| TATGACTGGTGGCTAAAATT+TGG | 0.347350 | 7:-27291899 | MsG0780037513.01.T01:CDS |
| CACGGCCTCTGCCCCTATAA+GGG | 0.349556 | 7:+27292590 | None:intergenic |
| AAGAAGTTCCTTTGTAATAC+AGG | 0.350718 | 7:+27291683 | None:intergenic |
| AAGCTACTTGTGTAATTAAA+GGG | 0.351362 | 7:+27291813 | None:intergenic |
| TCATAAAACCAATTTGGTAT+AGG | 0.356515 | 7:+27291917 | None:intergenic |
| AATGACGGTTGGTCAATAAA+AGG | 0.360710 | 7:-27292286 | MsG0780037513.01.T01:CDS |
| GCTATTGCTTTAATATCTTC+GGG | 0.369063 | 7:+27291635 | None:intergenic |
| TTTATAGCCTTCTCTCCATT+TGG | 0.370725 | 7:+27292073 | None:intergenic |
| ACCACGCATGTTTATTCTTA+GGG | 0.377570 | 7:+27291972 | None:intergenic |
| GGCAGAGGCCGTGGTCAATA+TGG | 0.380964 | 7:-27292580 | MsG0780037513.01.T01:CDS |
| AACCTACATTAGAAGATGTA+TGG | 0.401501 | 7:-27291334 | MsG0780037513.01.T01:CDS |
| TACATGATGGTTTCTGTGAC+AGG | 0.405841 | 7:+27292340 | None:intergenic |
| CTCAGTTAACCCTGAAATAG+TGG | 0.414160 | 7:-27291945 | MsG0780037513.01.T01:CDS |
| GTTGTCCAATCCCCTATTAA+AGG | 0.414987 | 7:+27292502 | None:intergenic |
| GATCTTGTTACCAAAAGAAT+GGG | 0.417378 | 7:-27292104 | MsG0780037513.01.T01:CDS |
| TCTTCTAATGTAGGTTCTAC+AGG | 0.428775 | 7:+27291341 | None:intergenic |
| TGGAATGTCCACTTCGTCCT+TGG | 0.430277 | 7:-27291405 | MsG0780037513.01.T01:CDS |
| ATGGTCAATTATTATATCTA+AGG | 0.430447 | 7:-27291720 | MsG0780037513.01.T01:CDS |
| AAAGGAACTTCTTCTACAAA+TGG | 0.433292 | 7:-27291673 | MsG0780037513.01.T01:CDS |
| AGATCTTGTTACCAAAAGAA+TGG | 0.452226 | 7:-27292105 | MsG0780037513.01.T01:CDS |
| ACATTCCTTTAATAGGGGAT+TGG | 0.454786 | 7:-27292507 | MsG0780037513.01.T01:CDS |
| GGAATGTCCACTTCGTCCTT+GGG | 0.456226 | 7:-27291404 | MsG0780037513.01.T01:CDS |
| CCTTATAGGGGCAGAGGCCG+TGG | 0.458334 | 7:-27292589 | MsG0780037513.01.T01:CDS |
| GGTCAATATGGCCGTGGTCG+TGG | 0.459191 | 7:-27292568 | MsG0780037513.01.T01:CDS |
| ATGGCCGTGGTCGTGGATAT+GGG | 0.466050 | 7:-27292561 | MsG0780037513.01.T01:CDS |
| AAAGCATCTTCTAATGAAGA+TGG | 0.470016 | 7:-27291425 | MsG0780037513.01.T01:CDS |
| AGAAAGCTTGAGTAAAAGCT+TGG | 0.489360 | 7:+27292005 | None:intergenic |
| CTTGAATCTAGAGGATATCC+TGG | 0.489732 | 7:-27292256 | MsG0780037513.01.T01:CDS |
| GGAATGTTTGATTCTAGTTG+AGG | 0.491795 | 7:+27292523 | None:intergenic |
| GAATGGGGTCAAAATCCAAA+TGG | 0.502702 | 7:-27292088 | MsG0780037513.01.T01:CDS |
| ATCAAACATTCCTTTAATAG+GGG | 0.517975 | 7:-27292512 | MsG0780037513.01.T01:CDS |
| ACAACTGTGCAAAATAATAG+AGG | 0.526049 | 7:-27292484 | MsG0780037513.01.T01:CDS |
| CTTTGACCAATAATGACGGT+TGG | 0.532707 | 7:-27292297 | MsG0780037513.01.T01:CDS |
| GGAAGATATCTTGAATCTAG+AGG | 0.534201 | 7:-27292265 | MsG0780037513.01.T01:CDS |
| CTCATCATCAATATACATGA+TGG | 0.535394 | 7:+27292327 | None:intergenic |
| GGCCGTGGTCAATATGGCCG+TGG | 0.537444 | 7:-27292574 | MsG0780037513.01.T01:CDS |
| TTATAAGCAAGTTGCAGTTG+AGG | 0.539028 | 7:-27292392 | MsG0780037513.01.T01:CDS |
| TCTGGCAAAATCTCAAGTGA+TGG | 0.556107 | 7:+27291875 | None:intergenic |
| ACCTACATTAGAAGATGTAT+GGG | 0.558442 | 7:-27291333 | MsG0780037513.01.T01:CDS |
| TCCCATACATCTTCTAATGT+AGG | 0.561091 | 7:+27291332 | None:intergenic |
| CATCATGTATATTGATGATG+AGG | 0.564931 | 7:-27292326 | MsG0780037513.01.T01:CDS |
| ATTTGATCTTCAGTTTCTTG+AGG | 0.567310 | 7:+27291503 | None:intergenic |
| TGAGGAATCTCCTCAAGAGC+GGG | 0.582945 | 7:-27292374 | MsG0780037513.01.T01:CDS |
| ACAACCCCTTATAGGGGCAG+AGG | 0.584858 | 7:-27292595 | MsG0780037513.01.T01:CDS |
| TCAAAATCCAAATGGAGAGA+AGG | 0.585174 | 7:-27292080 | MsG0780037513.01.T01:CDS |
| GGAACTTCTTCTACAAATGG+TGG | 0.585201 | 7:-27291670 | MsG0780037513.01.T01:CDS |
| ACGGCCTCTGCCCCTATAAG+GGG | 0.587592 | 7:+27292591 | None:intergenic |
| ACATGATGGTTTCTGTGACA+GGG | 0.604216 | 7:+27292341 | None:intergenic |
| TTATCTTTGACCAATAATGA+CGG | 0.605931 | 7:-27292301 | MsG0780037513.01.T01:CDS |
| CTGTGCAAAATAATAGAGGA+AGG | 0.626768 | 7:-27292480 | MsG0780037513.01.T01:CDS |
| ATAATATTCCTGTATTACAA+AGG | 0.631825 | 7:-27291691 | MsG0780037513.01.T01:CDS |
| TGAATGACAACCCCTTATAG+GGG | 0.635538 | 7:-27292601 | MsG0780037513.01.T01:CDS |
| ACCCTAAGAATAAACATGCG+TGG | 0.649303 | 7:-27291973 | MsG0780037513.01.T01:CDS |
| TACTCCCATATCCACGACCA+CGG | 0.658699 | 7:+27292557 | None:intergenic |
| TTGAGGAATCTCCTCAAGAG+CGG | 0.665206 | 7:-27292375 | MsG0780037513.01.T01:CDS |
| GACCACGGCCATATTGACCA+CGG | 0.690220 | 7:+27292572 | None:intergenic |
| ATCTTGTTACCAAAAGAATG+GGG | 0.710385 | 7:-27292103 | MsG0780037513.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAAAAATTATTATCAA+AGG | - | Chr7:27292370-27292389 | MsG0780037513.01.T01:CDS | 10.0% |
| !! | AATATATTTACTTCAATTAT+TGG | - | Chr7:27291866-27291885 | MsG0780037513.01.T01:CDS | 10.0% |
| !! | ATATATTTACTTCAATTATT+GGG | - | Chr7:27291867-27291886 | MsG0780037513.01.T01:CDS | 10.0% |
| !! | AAAAGTTTATAAAACTTTCT+TGG | + | Chr7:27291759-27291778 | None:intergenic | 15.0% |
| !! | AATTTACTAAAAAATAGACA+TGG | + | Chr7:27292141-27292160 | None:intergenic | 15.0% |
| !! | AATCAAACATTCCTTTAATA+GGG | - | Chr7:27291389-27291408 | MsG0780037513.01.T01:CDS | 20.0% |
| !! | ATAATATTCCTGTATTACAA+AGG | - | Chr7:27292211-27292230 | MsG0780037513.01.T01:CDS | 20.0% |
| !! | ATGGTCAATTATTATATCTA+AGG | - | Chr7:27292182-27292201 | MsG0780037513.01.T01:CDS | 20.0% |
| !! | TACAAAATTTGTATACTTCA+TGG | - | Chr7:27292055-27292074 | MsG0780037513.01.T01:CDS | 20.0% |
| !! | TTAGTAAATTCCAAATTCTT+TGG | - | Chr7:27292151-27292170 | MsG0780037513.01.T01:CDS | 20.0% |
| !!! | AACTTTCTTGGTTATTATTT+TGG | + | Chr7:27291747-27291766 | None:intergenic | 20.0% |
| !!! | CTCATCTATTTTAATAGTAT+TGG | + | Chr7:27292304-27292323 | None:intergenic | 20.0% |
| !!! | GTCAATAATATTTCTAGATT+TGG | + | Chr7:27291691-27291710 | None:intergenic | 20.0% |
| !!! | TACAAATTTTGTATACTTTC+TGG | + | Chr7:27292048-27292067 | None:intergenic | 20.0% |
| ! | AAAGCTACTTGTGTAATTAA+AGG | + | Chr7:27292093-27292112 | None:intergenic | 25.0% |
| ! | AAGCTACTTGTGTAATTAAA+GGG | + | Chr7:27292092-27292111 | None:intergenic | 25.0% |
| ! | AGCTATTGCTTTAATATCTT+CGG | + | Chr7:27292271-27292290 | None:intergenic | 25.0% |
| ! | ATCAAACATTCCTTTAATAG+GGG | - | Chr7:27291390-27291409 | MsG0780037513.01.T01:CDS | 25.0% |
| ! | GAATCAAACATTCCTTTAAT+AGG | - | Chr7:27291388-27291407 | MsG0780037513.01.T01:CDS | 25.0% |
| ! | TCATAAAACCAATTTGGTAT+AGG | + | Chr7:27291988-27292007 | None:intergenic | 25.0% |
| ! | TTATCTTTGACCAATAATGA+CGG | - | Chr7:27291601-27291620 | MsG0780037513.01.T01:CDS | 25.0% |
| !!! | AATTCCAAATTCTTTGGTTT+TGG | - | Chr7:27292157-27292176 | MsG0780037513.01.T01:CDS | 25.0% |
| !!! | CTTGGTTATTATTTTGGTAA+TGG | + | Chr7:27291741-27291760 | None:intergenic | 25.0% |
| !!! | GTTATTATTTTGGTAATGGT+GGG | + | Chr7:27291737-27291756 | None:intergenic | 25.0% |
| AAAGGAACTTCTTCTACAAA+TGG | - | Chr7:27292229-27292248 | MsG0780037513.01.T01:CDS | 30.0% | |
| AACCTACATTAGAAGATGTA+TGG | - | Chr7:27292568-27292587 | MsG0780037513.01.T01:CDS | 30.0% | |
| AAGAAGTTCCTTTGTAATAC+AGG | + | Chr7:27292222-27292241 | None:intergenic | 30.0% | |
| AAGGCTATAAAAATTGCTGA+AGG | - | Chr7:27291841-27291860 | MsG0780037513.01.T01:CDS | 30.0% | |
| ACAACTGTGCAAAATAATAG+AGG | - | Chr7:27291418-27291437 | MsG0780037513.01.T01:CDS | 30.0% | |
| ACCTACATTAGAAGATGTAT+GGG | - | Chr7:27292569-27292588 | MsG0780037513.01.T01:CDS | 30.0% | |
| AGATCTTGTTACCAAAAGAA+TGG | - | Chr7:27291797-27291816 | MsG0780037513.01.T01:CDS | 30.0% | |
| ATCTCCAAAACCAAAGAATT+TGG | + | Chr7:27292164-27292183 | None:intergenic | 30.0% | |
| ATCTTGTTACCAAAAGAATG+GGG | - | Chr7:27291799-27291818 | MsG0780037513.01.T01:CDS | 30.0% | |
| ATTTGATCTTCAGTTTCTTG+AGG | + | Chr7:27292402-27292421 | None:intergenic | 30.0% | |
| CTCATCATCAATATACATGA+TGG | + | Chr7:27291578-27291597 | None:intergenic | 30.0% | |
| GATCTTGTTACCAAAAGAAT+GGG | - | Chr7:27291798-27291817 | MsG0780037513.01.T01:CDS | 30.0% | |
| GCTATTGCTTTAATATCTTC+GGG | + | Chr7:27292270-27292289 | None:intergenic | 30.0% | |
| GCTTTGTGTAAAATGATTAC+TGG | - | Chr7:27292108-27292127 | MsG0780037513.01.T01:CDS | 30.0% | |
| TGGAAAAACCTATACCAAAT+TGG | - | Chr7:27291977-27291996 | MsG0780037513.01.T01:CDS | 30.0% | |
| ! | AAAGCATCTTCTAATGAAGA+TGG | - | Chr7:27292477-27292496 | MsG0780037513.01.T01:CDS | 30.0% |
| ! | ATAGGTTTTTCCACTATTTC+AGG | + | Chr7:27291970-27291989 | None:intergenic | 30.0% |
| ! | CATTAGAAGATGCTTTTGAA+GGG | + | Chr7:27292473-27292492 | None:intergenic | 30.0% |
| ! | GATACTTCATCTCTTTTTGA+AGG | + | Chr7:27291460-27291479 | None:intergenic | 30.0% |
| ! | TAGGTTTTTCCACTATTTCA+GGG | + | Chr7:27291969-27291988 | None:intergenic | 30.0% |
| ! | TCATTAGAAGATGCTTTTGA+AGG | + | Chr7:27292474-27292493 | None:intergenic | 30.0% |
| ! | TTCAAAATCTTTTGATCCCA+AGG | + | Chr7:27292517-27292536 | None:intergenic | 30.0% |
| !! | CATCATGTATATTGATGATG+AGG | - | Chr7:27291576-27291595 | MsG0780037513.01.T01:CDS | 30.0% |
| !! | GATTTTGAAGAAGATATTGC+AGG | - | Chr7:27292528-27292547 | MsG0780037513.01.T01:CDS | 30.0% |
| !!! | AAATTCTTTGGTTTTGGAGA+TGG | - | Chr7:27292163-27292182 | MsG0780037513.01.T01:CDS | 30.0% |
| !!! | GGTTATTATTTTGGTAATGG+TGG | + | Chr7:27291738-27291757 | None:intergenic | 30.0% |
| !!! | TACCAAATTGGTTTTATGAC+TGG | - | Chr7:27291989-27292008 | MsG0780037513.01.T01:CDS | 30.0% |
| AACCACGCATGTTTATTCTT+AGG | + | Chr7:27291934-27291953 | None:intergenic | 35.0% | |
| ACATTCCTTTAATAGGGGAT+TGG | - | Chr7:27291395-27291414 | MsG0780037513.01.T01:CDS | 35.0% | |
| ACCACGCATGTTTATTCTTA+GGG | + | Chr7:27291933-27291952 | None:intergenic | 35.0% | |
| AGAAAGCTTGAGTAAAAGCT+TGG | + | Chr7:27291900-27291919 | None:intergenic | 35.0% | |
| CACCAGTCATAAAACCAATT+TGG | + | Chr7:27291994-27292013 | None:intergenic | 35.0% | |
| CTGTGCAAAATAATAGAGGA+AGG | - | Chr7:27291422-27291441 | MsG0780037513.01.T01:CDS | 35.0% | |
| GGAAGATATCTTGAATCTAG+AGG | - | Chr7:27291637-27291656 | MsG0780037513.01.T01:CDS | 35.0% | |
| TATGACTGGTGGCTAAAATT+TGG | - | Chr7:27292003-27292022 | MsG0780037513.01.T01:CDS | 35.0% | |
| TATTGACCAACCGTCATTAT+TGG | + | Chr7:27291614-27291633 | None:intergenic | 35.0% | |
| TCAAAATCCAAATGGAGAGA+AGG | - | Chr7:27291822-27291841 | MsG0780037513.01.T01:CDS | 35.0% | |
| TCCCATACATCTTCTAATGT+AGG | + | Chr7:27292573-27292592 | None:intergenic | 35.0% | |
| TCTTCTAATGTAGGTTCTAC+AGG | + | Chr7:27292564-27292583 | None:intergenic | 35.0% | |
| TTATAAGCAAGTTGCAGTTG+AGG | - | Chr7:27291510-27291529 | MsG0780037513.01.T01:CDS | 35.0% | |
| TTTATAGCCTTCTCTCCATT+TGG | + | Chr7:27291832-27291851 | None:intergenic | 35.0% | |
| ! | AATGACGGTTGGTCAATAAA+AGG | - | Chr7:27291616-27291635 | MsG0780037513.01.T01:CDS | 35.0% |
| ! | CTAGATTTTCCAAAAAGTCC+AGG | + | Chr7:27291667-27291686 | None:intergenic | 35.0% |
| ! | GGAATGTTTGATTCTAGTTG+AGG | + | Chr7:27291382-27291401 | None:intergenic | 35.0% |
| !!! | CAAATTGGTTTTATGACTGG+TGG | - | Chr7:27291992-27292011 | MsG0780037513.01.T01:CDS | 35.0% |
| ACATGATGGTTTCTGTGACA+GGG | + | Chr7:27291564-27291583 | None:intergenic | 40.0% | |
| ACCCTAAGAATAAACATGCG+TGG | - | Chr7:27291929-27291948 | MsG0780037513.01.T01:CDS | 40.0% | |
| CTCAGTTAACCCTGAAATAG+TGG | - | Chr7:27291957-27291976 | MsG0780037513.01.T01:CDS | 40.0% | |
| CTTGAATCTAGAGGATATCC+TGG | - | Chr7:27291646-27291665 | MsG0780037513.01.T01:CDS | 40.0% | |
| CTTTGACCAATAATGACGGT+TGG | - | Chr7:27291605-27291624 | MsG0780037513.01.T01:CDS | 40.0% | |
| GAATGGGGTCAAAATCCAAA+TGG | - | Chr7:27291814-27291833 | MsG0780037513.01.T01:CDS | 40.0% | |
| GGAACTTCTTCTACAAATGG+TGG | - | Chr7:27292232-27292251 | MsG0780037513.01.T01:CDS | 40.0% | |
| GTTGTCCAATCCCCTATTAA+AGG | + | Chr7:27291403-27291422 | None:intergenic | 40.0% | |
| TACATGATGGTTTCTGTGAC+AGG | + | Chr7:27291565-27291584 | None:intergenic | 40.0% | |
| TCTGGCAAAATCTCAAGTGA+TGG | + | Chr7:27292030-27292049 | None:intergenic | 40.0% | |
| ! | AGAGGATATCCTGGACTTTT+TGG | - | Chr7:27291655-27291674 | MsG0780037513.01.T01:CDS | 40.0% |
| ! | TTTTTGAATACCCGCTCTTG+AGG | + | Chr7:27291541-27291560 | None:intergenic | 40.0% |
| !! | GGATTTTGACCCCATTCTTT+TGG | + | Chr7:27291811-27291830 | None:intergenic | 40.0% |
| TTGAGGAATCTCCTCAAGAG+CGG | - | Chr7:27291527-27291546 | MsG0780037513.01.T01:CDS | 45.0% | |
| ! | TTTTGATCCCAAGGACGAAG+TGG | + | Chr7:27292508-27292527 | None:intergenic | 45.0% |
| GGAATGTCCACTTCGTCCTT+GGG | - | Chr7:27292498-27292517 | MsG0780037513.01.T01:CDS | 50.0% | |
| TACTCCCATATCCACGACCA+CGG | + | Chr7:27291348-27291367 | None:intergenic | 50.0% | |
| TGAGGAATCTCCTCAAGAGC+GGG | - | Chr7:27291528-27291547 | MsG0780037513.01.T01:CDS | 50.0% | |
| TGGAATGTCCACTTCGTCCT+TGG | - | Chr7:27292497-27292516 | MsG0780037513.01.T01:CDS | 50.0% | |
| ACAACCCCTTATAGGGGCAG+AGG | - | Chr7:27291307-27291326 | MsG0780037513.01.T01:CDS | 55.0% | |
| ATGGCCGTGGTCGTGGATAT+GGG | - | Chr7:27291341-27291360 | MsG0780037513.01.T01:CDS | 55.0% | |
| GACCACGGCCATATTGACCA+CGG | + | Chr7:27291333-27291352 | None:intergenic | 55.0% | |
| TATGGCCGTGGTCGTGGATA+TGG | - | Chr7:27291340-27291359 | MsG0780037513.01.T01:CDS | 55.0% | |
| ACGGCCTCTGCCCCTATAAG+GGG | + | Chr7:27291314-27291333 | None:intergenic | 60.0% | |
| CACGGCCTCTGCCCCTATAA+GGG | + | Chr7:27291315-27291334 | None:intergenic | 60.0% | |
| GGCAGAGGCCGTGGTCAATA+TGG | - | Chr7:27291322-27291341 | MsG0780037513.01.T01:CDS | 60.0% | |
| GGTCAATATGGCCGTGGTCG+TGG | - | Chr7:27291334-27291353 | MsG0780037513.01.T01:CDS | 60.0% | |
| CCACGGCCTCTGCCCCTATA+AGG | + | Chr7:27291316-27291335 | None:intergenic | 65.0% | |
| CCTTATAGGGGCAGAGGCCG+TGG | - | Chr7:27291313-27291332 | MsG0780037513.01.T01:CDS | 65.0% | |
| GGCCGTGGTCAATATGGCCG+TGG | - | Chr7:27291328-27291347 | MsG0780037513.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 27291304 | 27292620 | 27291304 | ID=MsG0780037513.01;Name=MsG0780037513.01 |
| Chr7 | mRNA | 27291304 | 27292620 | 27291304 | ID=MsG0780037513.01.T01;Parent=MsG0780037513.01;Name=MsG0780037513.01.T01;_AED=0.18;_eAED=0.18;_QI=0|-1|0|1|-1|1|1|0|438 |
| Chr7 | exon | 27291304 | 27292620 | 27291304 | ID=MsG0780037513.01.T01:exon:12687;Parent=MsG0780037513.01.T01 |
| Chr7 | CDS | 27291304 | 27292620 | 27291304 | ID=MsG0780037513.01.T01:cds;Parent=MsG0780037513.01.T01 |
| Gene Sequence |
| Protein sequence |
