AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037805.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037805.01.T01 MTR_7g014250 79.476 458 49 4 1 413 1 458 0.0 716
MsG0780037805.01.T01 MTR_7g014330 78.603 458 53 3 1 413 1 458 0.0 715
MsG0780037805.01.T01 MTR_7g014230 78.634 454 52 3 2 410 4 457 0.0 701
MsG0780037805.01.T01 MTR_7g014360 84.677 372 37 1 42 413 37 388 0.0 638
MsG0780037805.01.T01 MTR_7g014310 69.277 332 48 2 65 396 31 308 4.90e-155 440
MsG0780037805.01.T01 MTR_6g015315 46.524 374 187 7 44 413 90 454 3.67e-110 331
MsG0780037805.01.T01 MTR_6g015815 41.631 466 207 12 2 413 8 462 5.34e-110 331
MsG0780037805.01.T01 MTR_6g015830 42.398 467 200 14 3 413 9 462 1.09e-108 328
MsG0780037805.01.T01 MTR_6g015850 41.810 464 204 13 3 413 9 459 2.77e-107 324
MsG0780037805.01.T01 MTR_6g015320 45.213 376 188 8 44 413 93 456 6.92e-103 313
MsG0780037805.01.T01 MTR_7g014610 40.155 386 212 9 44 413 95 477 1.78e-81 258
MsG0780037805.01.T01 MTR_7g014160 39.276 387 209 13 44 412 96 474 1.29e-78 251
MsG0780037805.01.T01 MTR_7g014200 38.522 379 220 9 44 413 96 470 3.06e-77 247
MsG0780037805.01.T01 MTR_6g015310 39.080 348 155 8 44 388 38 331 2.32e-71 228
MsG0780037805.01.T01 MTR_7g013850 35.417 384 215 12 54 412 106 481 3.47e-67 221
MsG0780037805.01.T01 MTR_7g014620 36.968 376 205 8 44 411 81 432 1.39e-65 216
MsG0780037805.01.T01 MTR_7g014205 77.099 131 19 1 250 380 1 120 2.54e-65 204
MsG0780037805.01.T01 MTR_2g089765 34.279 423 235 15 15 407 69 478 3.27e-58 198
MsG0780037805.01.T01 MTR_3g028210 32.292 384 231 10 44 411 94 464 2.06e-57 195
MsG0780037805.01.T01 MTR_7g014210 80.870 115 21 1 269 382 24 138 1.04e-56 184
MsG0780037805.01.T01 MTR_2g089670 33.894 416 234 17 15 407 76 473 5.85e-51 178
MsG0780037805.01.T01 MTR_8g012750 31.105 389 240 10 44 411 91 472 5.96e-51 178
MsG0780037805.01.T01 MTR_7g015860 32.880 441 234 15 3 407 42 456 1.21e-50 177
MsG0780037805.01.T01 MTR_2g089735 30.357 392 240 11 41 413 86 463 3.04e-50 176
MsG0780037805.01.T01 MTR_3g087640 31.990 397 229 13 41 411 91 472 2.46e-48 171
MsG0780037805.01.T01 MTR_2g089650 29.695 394 239 13 41 413 89 465 6.53e-46 164
MsG0780037805.01.T01 MTR_2g089755 30.127 395 240 13 41 413 97 477 2.04e-45 164
MsG0780037805.01.T01 MTR_7g014630 40.212 189 98 5 44 222 96 279 2.40e-36 136
MsG0780037805.01.T01 MTR_7g014670 37.368 190 113 4 227 411 71 259 3.41e-35 131
MsG0780037805.01.T01 MTR_3g435300 31.937 191 105 7 41 217 84 263 5.05e-21 92.4
MsG0780037805.01.T01 MTR_4g094842 28.767 292 170 13 95 382 152 409 8.45e-18 85.5
MsG0780037805.01.T01 MTR_0190s0020 29.206 315 160 15 95 392 147 415 1.39e-17 84.7
MsG0780037805.01.T01 MTR_7g014180 47.500 80 42 0 44 123 94 173 5.41e-17 79.0
MsG0780037805.01.T01 MTR_7g026860 28.000 275 170 11 95 364 138 389 1.11e-15 79.0
MsG0780037805.01.T01 MTR_3g088420 27.018 285 163 10 95 368 138 388 2.63e-15 77.8
MsG0780037805.01.T01 MTR_4g022825 27.273 286 168 10 95 368 138 395 6.24e-15 76.6
MsG0780037805.01.T01 MTR_3g049150 25.526 380 221 15 59 407 95 443 1.10e-14 75.9
MsG0780037805.01.T01 MTR_3g026310 27.682 289 171 14 95 368 138 403 1.14e-14 75.9
MsG0780037805.01.T01 MTR_8g075610 25.763 295 179 12 82 364 108 374 1.02e-13 72.8
MsG0780037805.01.T01 MTR_4g022800 29.474 285 165 12 95 368 138 397 1.18e-13 72.8
MsG0780037805.01.T01 MTR_3g026950 25.648 347 202 14 72 388 107 427 2.70e-13 71.6
MsG0780037805.01.T01 MTR_4g094835 23.607 305 182 14 79 368 131 399 3.05e-13 71.6
MsG0780037805.01.T01 MTR_4g022720 25.357 280 176 9 95 368 138 390 1.89e-12 68.9
MsG0780037805.01.T01 MTR_8g096530 25.182 274 173 8 96 365 138 383 2.16e-12 68.9
MsG0780037805.01.T01 MTR_3g098980 23.743 358 235 11 59 408 106 433 2.54e-12 68.6
MsG0780037805.01.T01 MTR_3g435290 34.483 116 71 3 299 413 8 119 3.62e-11 60.5
MsG0780037805.01.T01 MTR_2g089745 48.387 62 31 1 347 407 12 73 7.76e-11 58.5
MsG0780037805.01.T01 MTR_7g086000 25.424 354 227 11 79 411 120 457 8.06e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037805.01.T01 AT5G39090 37.302 378 205 9 44 411 92 447 9.21e-78 248
MsG0780037805.01.T01 AT5G39050 37.143 385 211 11 44 411 97 467 1.46e-77 248
MsG0780037805.01.T01 AT3G29670 38.381 383 207 12 41 413 88 451 7.93e-72 233
MsG0780037805.01.T01 AT3G29590 38.770 374 192 12 52 411 98 448 1.61e-71 232
MsG0780037805.01.T01 AT3G29635 38.830 376 207 11 44 411 94 454 1.45e-70 229
MsG0780037805.01.T01 AT5G39080 35.958 381 216 10 42 407 90 457 4.34e-70 228
MsG0780037805.01.T01 AT5G61160 36.031 383 211 10 44 413 91 452 2.93e-65 215
MsG0780037805.01.T01 AT3G29680 38.133 375 206 13 41 407 87 443 4.18e-62 207
MsG0780037805.01.T01 AT1G03940 33.333 393 222 13 41 411 90 464 8.86e-59 199
MsG0780037805.01.T01 AT1G03495 33.579 271 148 11 41 295 90 344 9.78e-36 134
MsG0780037805.01.T01 AT3G29720 37.681 207 109 5 54 254 26 218 1.38e-31 120
MsG0780037805.01.T01 AT3G29690 34.247 146 90 3 267 411 38 178 2.90e-18 82.4
MsG0780037805.01.T01 AT5G23940 25.902 305 177 10 86 374 139 410 8.69e-17 82.4
MsG0780037805.01.T01 AT2G19070 22.715 383 253 11 52 411 89 451 1.92e-13 72.0
MsG0780037805.01.T01 AT3G47170 26.316 266 155 10 44 297 108 344 3.45e-13 71.6
MsG0780037805.01.T01 AT5G41040 25.078 319 202 12 99 409 151 440 2.74e-11 65.5
MsG0780037805.01.T01 AT5G41040 25.078 319 202 12 99 409 167 456 2.82e-11 65.5

Find 62 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGATTCCTACAACATATTT+TGG 0.090584 7:+33512247 MsG0780037805.01.T01:CDS
GATTTCCAAACTGTTAAATT+TGG 0.154685 7:+33505742 MsG0780037805.01.T01:CDS
ACATGATCAAGCATCTATTT+TGG 0.184297 7:+33511691 MsG0780037805.01.T01:CDS
CTTCGGTAGATAACAGAATT+TGG 0.202481 7:-33505769 None:intergenic
AGTGAGTTATTTGGAGAAAA+TGG 0.218894 7:+33512307 MsG0780037805.01.T01:CDS
TGGTCTTCATGGTTACTTAA+AGG 0.232873 7:+33512406 MsG0780037805.01.T01:CDS
TTTGAAACAAGTGAGTTATT+TGG 0.235177 7:+33512298 MsG0780037805.01.T01:CDS
TCTGATTTCAATTATCTATC+TGG 0.246628 7:+33511611 MsG0780037805.01.T01:CDS
GAAACCATTTCAACTTTCTT+TGG 0.269632 7:-33512514 None:intergenic
GTGCTATAAACCTCAAATTT+AGG 0.277190 7:-33512472 None:intergenic
CCAATTGAATATCCATAGTT+TGG 0.279518 7:-33511734 None:intergenic
AACCAACAATAGAAGCTTAA+TGG 0.299594 7:+33511973 MsG0780037805.01.T01:CDS
GAAATCCAAATTTAACAGTT+TGG 0.311730 7:-33505747 None:intergenic
AGGCAAAATATTTGAGTGAT+TGG 0.316985 7:+33511936 MsG0780037805.01.T01:CDS
GTTCCAAATGATTCATTTAG+AGG 0.320989 7:+33512010 MsG0780037805.01.T01:CDS
TCTCTTTCTGATTGTAGAAA+TGG 0.323114 7:+33512559 MsG0780037805.01.T01:CDS
ACAATAGAAGCTTAATGGTT+TGG 0.327026 7:+33511978 MsG0780037805.01.T01:CDS
AACCATTAAGCTTCTATTGT+TGG 0.335300 7:-33511975 None:intergenic
CAATAGAAGCTTAATGGTTT+GGG 0.346870 7:+33511979 MsG0780037805.01.T01:CDS
GAGGTTTATAGCACTGATTT+TGG 0.354064 7:+33512481 MsG0780037805.01.T01:CDS
CCAAAATATGTTGTAGGAAT+CGG 0.355820 7:-33512247 None:intergenic
GAGCTGAAAATTGGTCTTCA+TGG 0.367514 7:+33512395 MsG0780037805.01.T01:CDS
CCAAACTATGGATATTCAAT+TGG 0.373736 7:+33511734 MsG0780037805.01.T01:CDS
CAATTTCCAAAATATGTTGT+AGG 0.386192 7:-33512253 None:intergenic
CAAGGATCCAAATGAATTAG+AGG 0.386216 7:+33511916 MsG0780037805.01.T01:CDS
TCTTCACTTGTCAACATTTG+TGG 0.387843 7:+33512120 MsG0780037805.01.T01:CDS
AACCCTCTAAATGAATCATT+TGG 0.391425 7:-33512013 None:intergenic
TCATGTGAAATATTCAAGTT+AGG 0.394263 7:-33511674 None:intergenic
CCTTTGATGAATTTAATGAT+TGG 0.405006 7:-33511554 None:intergenic
GTTATTTCAATTATCTCGTT+CGG 0.405831 7:+33512033 MsG0780037805.01.T01:CDS
ATTTGTAGTGTCAAAACAAA+AGG 0.406667 7:+33512075 MsG0780037805.01.T01:CDS
TGCTGGTTCACCTAAATTTG+AGG 0.418931 7:+33512462 MsG0780037805.01.T01:CDS
GGTAGTTCTTCTTGTGAAGA+TGG 0.419420 7:-33505682 None:intergenic
TGTTGAATGGAGCTGAAAAT+TGG 0.427307 7:+33512386 MsG0780037805.01.T01:CDS
TGGCTTTGAATATCGATTGC+CGG 0.431534 7:+33512209 MsG0780037805.01.T01:CDS
AAAACCAAAGAAAGTTGAAA+TGG 0.434697 7:+33512510 MsG0780037805.01.T01:CDS
TTCGGAGATCGAAAAGCTTA+AGG 0.435179 7:+33512051 MsG0780037805.01.T01:CDS
ATTGCTGATGTTAAAACAAT+TGG 0.438756 7:+33512436 MsG0780037805.01.T01:CDS
AATGGTGATGGTGTTGAGAT+AGG 0.443549 7:+33512577 MsG0780037805.01.T01:CDS
TTAAAAGATGGTGTGTTGAA+TGG 0.447020 7:+33512373 MsG0780037805.01.T01:CDS
TCGGCTGATCTAAACGATTC+CGG 0.447477 7:-33512228 None:intergenic
GCTTTGAAAACTTTAAAAGA+TGG 0.455963 7:+33512361 MsG0780037805.01.T01:CDS
AAATTCATGTGGCAAACAAA+GGG 0.476984 7:-33511867 None:intergenic
TTCGCTTCGCTCTTTGTCAA+AGG 0.485503 7:+33512631 MsG0780037805.01.T01:CDS
ATGGTTTCTATAGATAGAAC+TGG 0.490163 7:+33512529 MsG0780037805.01.T01:CDS
GTTAAAACAATTGGTACTGC+TGG 0.495742 7:+33512445 MsG0780037805.01.T01:CDS
TGTCAAAACAAAAGGGTACT+AGG 0.501108 7:+33512083 MsG0780037805.01.T01:CDS
TTCCAAATGATTCATTTAGA+GGG 0.515033 7:+33512011 MsG0780037805.01.T01:CDS
CTATGATAGAAAAGTAATCA+AGG 0.519078 7:+33511898 MsG0780037805.01.T01:CDS
GGTATCTATTGCTTATGCAT+TGG 0.520850 7:+33512141 MsG0780037805.01.T01:CDS
AAAATTCATGTGGCAAACAA+AGG 0.522274 7:-33511868 None:intergenic
TTGAGTGATTGGTTAAAGCA+AGG 0.525666 7:+33511947 MsG0780037805.01.T01:CDS
TGAATTTGTGTAGCTTCAGA+AGG 0.527222 7:-33511641 None:intergenic
TCTACAATCAGAAAGAGAAA+AGG 0.535706 7:-33512554 None:intergenic
TTTGTAGTGTCAAAACAAAA+GGG 0.558518 7:+33512076 MsG0780037805.01.T01:CDS
AGAGGAAGTGATGTTTCTGA+AGG 0.559795 7:-33505703 None:intergenic
CCAATCATTAAATTCATCAA+AGG 0.568697 7:+33511554 MsG0780037805.01.T01:CDS
TGGAGAAAATGGACTAATTG+TGG 0.575913 7:+33512318 MsG0780037805.01.T01:CDS
TCTGATTGTAGAAATGGTGA+TGG 0.615354 7:+33512565 MsG0780037805.01.T01:CDS
AGTGATTGGTTAAAGCAAGG+TGG 0.623091 7:+33511950 MsG0780037805.01.T01:CDS
TAGAAAGGACAAAATTCATG+TGG 0.641435 7:-33511878 None:intergenic
AATTCATGTGGCAAACAAAG+GGG 0.665834 7:-33511866 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAATTAAGAACTATT+GGG - Chr7:33509040-33509059 None:intergenic 10.0%
!! TTTAAAAAATTAAGAACTAT+TGG - Chr7:33509041-33509060 None:intergenic 10.0%
!!! AATAGTTCTTAATTTTTTAA+AGG + Chr7:33509040-33509059 MsG0780037805.01.T01:intron 10.0%
!!! ATAGTTCTTAATTTTTTAAA+GGG + Chr7:33509041-33509060 MsG0780037805.01.T01:intron 10.0%
!! TAAAAAATTAAGAACTATTG+GGG - Chr7:33509039-33509058 None:intergenic 15.0%
!! TTAAAAAGTTATATCCTTAA+TGG - Chr7:33508870-33508889 None:intergenic 15.0%
!!! ATTAAGGATATAACTTTTTA+AGG + Chr7:33508869-33508888 MsG0780037805.01.T01:intron 15.0%
!!! TAATACCATATTAATTTGAA+CGG - Chr7:33506032-33506051 None:intergenic 15.0%
!!! TAGTTCTTAATTTTTTAAAG+GGG + Chr7:33509042-33509061 MsG0780037805.01.T01:intron 15.0%
!!! TATATTACTTTAAAGAGAAA+TGG - Chr7:33506163-33506182 None:intergenic 15.0%
!! AAAAAATTAAGAACTATTGG+GGG - Chr7:33509038-33509057 None:intergenic 20.0%
!! AACTAGTAAGTGTTTATATA+TGG - Chr7:33506747-33506766 None:intergenic 20.0%
!! AAGAATCATATATTATCGAA+GGG + Chr7:33506237-33506256 MsG0780037805.01.T01:intron 20.0%
!! AAGAATCATATATTATCGAA+TGG + Chr7:33506237-33506256 MsG0780037805.01.T01:intron 20.0%
!! AAGAATTGCCATAAATTTAA+TGG - Chr7:33509913-33509932 None:intergenic 20.0%
!! AATATAAGATTGCAAGTTTA+CGG + Chr7:33508110-33508129 MsG0780037805.01.T01:intron 20.0%
!! AATTTAGATAATTCTTTGTG+AGG - Chr7:33508448-33508467 None:intergenic 20.0%
!! ACAAAAATAGTAACAAAGAA+TGG - Chr7:33509994-33510013 None:intergenic 20.0%
!! ACAAAAATTGAAGTAATTCT+TGG - Chr7:33508221-33508240 None:intergenic 20.0%
!! ACTAGTAAGTGTTTATATAT+GGG - Chr7:33506746-33506765 None:intergenic 20.0%
!! AGTAACATATTGTACTTAAA+TGG - Chr7:33507864-33507883 None:intergenic 20.0%
!! ATATATAAACACTTACTAGT+TGG + Chr7:33506746-33506765 MsG0780037805.01.T01:intron 20.0%
!! ATTAAGAATCGTTATTACAA+TGG - Chr7:33507582-33507601 None:intergenic 20.0%
!! ATTTATCCTTAATGTGTTTA+GGG + Chr7:33510194-33510213 MsG0780037805.01.T01:intron 20.0%
!! GTATTATTACCATTCTATTA+TGG + Chr7:33506046-33506065 MsG0780037805.01.T01:intron 20.0%
!! TATATAAACACTTACTAGTT+GGG + Chr7:33506747-33506766 MsG0780037805.01.T01:intron 20.0%
!! TTAATTCTAGTGAAGAAAAT+TGG - Chr7:33506841-33506860 None:intergenic 20.0%
!! TTCGATAATATATGATTCTT+CGG - Chr7:33506237-33506256 None:intergenic 20.0%
!! TTGTATATTAGCAAATCTTA+TGG - Chr7:33506927-33506946 None:intergenic 20.0%
!!! AACTTCTTTTATCAAATCTT+GGG + Chr7:33511796-33511815 MsG0780037805.01.T01:CDS 20.0%
!!! AATTACTTCAATTTTTGTCT+AGG + Chr7:33508223-33508242 MsG0780037805.01.T01:intron 20.0%
!!! ACATATTTTGGAAATTGTAT+TGG + Chr7:33512259-33512278 MsG0780037805.01.T01:CDS 20.0%
!!! AGTTTAATTTTTGAGTAACT+TGG - Chr7:33509660-33509679 None:intergenic 20.0%
!!! ATTACTTTTCTATCATAGAA+AGG - Chr7:33511896-33511915 None:intergenic 20.0%
!!! GTTACTATTTTTGTAACAAA+TGG + Chr7:33510000-33510019 MsG0780037805.01.T01:intron 20.0%
!!! TAAGATTTGCTAATATACAA+AGG + Chr7:33506927-33506946 MsG0780037805.01.T01:intron 20.0%
!!! TATAACTTTTTAAGGCTTAA+TGG + Chr7:33508877-33508896 MsG0780037805.01.T01:intron 20.0%
!!! TTCTGATTTATATGAACTTT+TGG + Chr7:33509575-33509594 MsG0780037805.01.T01:intron 20.0%
!!! TTGTATTTGGAATTTCAAAA+AGG - Chr7:33508743-33508762 None:intergenic 20.0%
! AAAACCAAAGAAAGTTGAAA+TGG + Chr7:33512510-33512529 MsG0780037805.01.T01:CDS 25.0%
! ACTAGAAGAACAAATCTATA+TGG - Chr7:33508518-33508537 None:intergenic 25.0%
! AGAGTCATATATTCTTCTTA+AGG + Chr7:33507901-33507920 MsG0780037805.01.T01:intron 25.0%
! AGTTCAAAAATAAGACAAGT+TGG + Chr7:33509319-33509338 MsG0780037805.01.T01:intron 25.0%
! ATACTTTCTTTGACATACTA+TGG + Chr7:33511366-33511385 MsG0780037805.01.T01:intron 25.0%
! ATATAAACACTTACTAGTTG+GGG + Chr7:33506748-33506767 MsG0780037805.01.T01:intron 25.0%
! ATATCCATAGTTTGGAAAAA+CGG - Chr7:33511729-33511748 None:intergenic 25.0%
! ATTGCTGATGTTAAAACAAT+TGG + Chr7:33512436-33512455 MsG0780037805.01.T01:CDS 25.0%
! ATTTGTAGTGTCAAAACAAA+AGG + Chr7:33512075-33512094 MsG0780037805.01.T01:CDS 25.0%
! CAATTTCCAAAATATGTTGT+AGG - Chr7:33512256-33512275 None:intergenic 25.0%
! CACACAACTAATAAAATAGA+AGG + Chr7:33509719-33509738 MsG0780037805.01.T01:intron 25.0%
! CCAATCATTAAATTCATCAA+AGG + Chr7:33511554-33511573 MsG0780037805.01.T01:CDS 25.0%
! CCTTTGATGAATTTAATGAT+TGG - Chr7:33511557-33511576 None:intergenic 25.0%
! CGATAAATAACGAAACATAT+AGG - Chr7:33509212-33509231 None:intergenic 25.0%
! CTATGATAGAAAAGTAATCA+AGG + Chr7:33511898-33511917 MsG0780037805.01.T01:CDS 25.0%
! CTATGATCACTTTAACATTT+AGG + Chr7:33509178-33509197 MsG0780037805.01.T01:intron 25.0%
! GAAATCCAAATTTAACAGTT+TGG - Chr7:33505750-33505769 None:intergenic 25.0%
! GAAGAATCATATATTATCGA+AGG + Chr7:33506236-33506255 MsG0780037805.01.T01:intron 25.0%
! GATTTATCCTTAATGTGTTT+AGG + Chr7:33510193-33510212 MsG0780037805.01.T01:intron 25.0%
! GATTTCCAAACTGTTAAATT+TGG + Chr7:33505742-33505761 MsG0780037805.01.T01:CDS 25.0%
! GTTTCTTAATTGGATATATC+CGG + Chr7:33506517-33506536 MsG0780037805.01.T01:intron 25.0%
! TAGAAGAAAATTCTTTGAAC+AGG - Chr7:33511404-33511423 None:intergenic 25.0%
! TATGAAAAAAACTAGTGTGT+GGG - Chr7:33506807-33506826 None:intergenic 25.0%
! TATGAACTTGGTTTATACAA+TGG - Chr7:33508911-33508930 None:intergenic 25.0%
! TCTGATTTCAATTATCTATC+TGG + Chr7:33511611-33511630 MsG0780037805.01.T01:CDS 25.0%
! TTCCAAATGATTCATTTAGA+GGG + Chr7:33512011-33512030 MsG0780037805.01.T01:CDS 25.0%
! TTTGTAGTGTCAAAACAAAA+GGG + Chr7:33512076-33512095 MsG0780037805.01.T01:CDS 25.0%
!! AGAATTTTTGTTCTTAGACT+TGG + Chr7:33509371-33509390 MsG0780037805.01.T01:intron 25.0%
!! AGGTCTAAAATAAACTCTTA+AGG - Chr7:33508428-33508447 None:intergenic 25.0%
!! ATTACTTTAAAGAGAAATGG+TGG - Chr7:33506160-33506179 None:intergenic 25.0%
!! CAACTTCTTTTATCAAATCT+TGG + Chr7:33511795-33511814 MsG0780037805.01.T01:CDS 25.0%
!! GAATTTTTGTTCTTAGACTT+GGG + Chr7:33509372-33509391 MsG0780037805.01.T01:intron 25.0%
!! GTAAAAGTAAAAAAGTGCAA+TGG - Chr7:33511492-33511511 None:intergenic 25.0%
!! GTTATTTCAATTATCTCGTT+CGG + Chr7:33512033-33512052 MsG0780037805.01.T01:CDS 25.0%
!! TATTTTGCCTCTAATTCATT+TGG - Chr7:33511926-33511945 None:intergenic 25.0%
!! TCATGTGAAATATTCAAGTT+AGG - Chr7:33511677-33511696 None:intergenic 25.0%
!! TGTAACAATCAAAACTTGTT+TGG + Chr7:33510049-33510068 MsG0780037805.01.T01:intron 25.0%
!! TTTAGAATACACCTATGAAA+AGG - Chr7:33507056-33507075 None:intergenic 25.0%
!! TTTGAAACAAGTGAGTTATT+TGG + Chr7:33512298-33512317 MsG0780037805.01.T01:CDS 25.0%
!!! AATGCGTTTTGTTTCTTAAT+TGG + Chr7:33510998-33511017 MsG0780037805.01.T01:intron 25.0%
!!! AATTGTTTTAACATCAGCAA+TGG - Chr7:33512437-33512456 None:intergenic 25.0%
!!! ACTTGTCTTATTTTTGAACT+TGG - Chr7:33509319-33509338 None:intergenic 25.0%
!!! CGTCTTAAAATTGTTGTTTT+TGG + Chr7:33510267-33510286 MsG0780037805.01.T01:intron 25.0%
!!! CTTGTCTTATTTTTGAACTT+GGG - Chr7:33509318-33509337 None:intergenic 25.0%
!!! CTTGTTATTGTTTTACGTAA+GGG + Chr7:33509930-33509949 MsG0780037805.01.T01:intron 25.0%
!!! GAAACTTGTTAAAAACAAGT+CGG + Chr7:33506339-33506358 MsG0780037805.01.T01:intron 25.0%
!!! GAAAGAGATTTTTTGAGTTT+GGG - Chr7:33511470-33511489 None:intergenic 25.0%
!!! GCTTTGAAAACTTTAAAAGA+TGG + Chr7:33512361-33512380 MsG0780037805.01.T01:CDS 25.0%
!!! TATTTTGGAAATTGTATTGG+AGG + Chr7:33512262-33512281 MsG0780037805.01.T01:CDS 25.0%
!!! TCTTGTTATTGTTTTACGTA+AGG + Chr7:33509929-33509948 MsG0780037805.01.T01:intron 25.0%
!!! TTTTACTTTTACCCTCTTTT+GGG + Chr7:33511500-33511519 MsG0780037805.01.T01:intron 25.0%
!!! TTTTTACTTTTACCCTCTTT+TGG + Chr7:33511499-33511518 MsG0780037805.01.T01:intron 25.0%
AAAAGGTAACTAAAACCTGA+AGG - Chr7:33508726-33508745 None:intergenic 30.0%
AAAATTCATGTGGCAAACAA+AGG - Chr7:33511871-33511890 None:intergenic 30.0%
AAACAAAACGCATTTGCTTA+AGG - Chr7:33510992-33511011 None:intergenic 30.0%
AAAGAATATACGAGCATCAT+TGG - Chr7:33508050-33508069 None:intergenic 30.0%
AAAGGTAACTAAAACCTGAA+GGG - Chr7:33508725-33508744 None:intergenic 30.0%
AAATTCATGTGGCAAACAAA+GGG - Chr7:33511870-33511889 None:intergenic 30.0%
AACAAAAAAACGAGTGACTT+GGG + Chr7:33510949-33510968 MsG0780037805.01.T01:intron 30.0%
AACCAACAATAGAAGCTTAA+TGG + Chr7:33511973-33511992 MsG0780037805.01.T01:CDS 30.0%
AACCATTAAGCTTCTATTGT+TGG - Chr7:33511978-33511997 None:intergenic 30.0%
AACCCTCTAAATGAATCATT+TGG - Chr7:33512016-33512035 None:intergenic 30.0%
AAGAAAATTCTTTGAACAGG+TGG - Chr7:33511401-33511420 None:intergenic 30.0%
ACAAAGTTGAGAAGATCTTA+AGG - Chr7:33508152-33508171 None:intergenic 30.0%
ACAATAGAAGCTTAATGGTT+TGG + Chr7:33511978-33511997 MsG0780037805.01.T01:CDS 30.0%
ACTTCTCCAAAACATGAATA+TGG + Chr7:33506107-33506126 MsG0780037805.01.T01:intron 30.0%
AGAAGCAATAAACGATGAAA+TGG - Chr7:33508831-33508850 None:intergenic 30.0%
AGAATTACACCCTCAAAATA+TGG + Chr7:33505952-33505971 MsG0780037805.01.T01:intron 30.0%
AGCCTATGATATGTATTCAT+CGG - Chr7:33509240-33509259 None:intergenic 30.0%
AGGCAAAATATTTGAGTGAT+TGG + Chr7:33511936-33511955 MsG0780037805.01.T01:CDS 30.0%
AGTGAGTTATTTGGAGAAAA+TGG + Chr7:33512307-33512326 MsG0780037805.01.T01:CDS 30.0%
ATCTATACTCTATGTTGAGT+GGG - Chr7:33507221-33507240 None:intergenic 30.0%
ATGGTTTCTATAGATAGAAC+TGG + Chr7:33512529-33512548 MsG0780037805.01.T01:CDS 30.0%
CAAAATCAATCGGTTGTATT+TGG - Chr7:33508756-33508775 None:intergenic 30.0%
CAATAGAAGCTTAATGGTTT+GGG + Chr7:33511979-33511998 MsG0780037805.01.T01:CDS 30.0%
CCAAAATATGTTGTAGGAAT+CGG - Chr7:33512250-33512269 None:intergenic 30.0%
CCAAACTATGGATATTCAAT+TGG + Chr7:33511734-33511753 MsG0780037805.01.T01:CDS 30.0%
CCAATTGAATATCCATAGTT+TGG - Chr7:33511737-33511756 None:intergenic 30.0%
CCACTATTCTTTAGTTAAAG+GGG + Chr7:33509120-33509139 MsG0780037805.01.T01:intron 30.0%
CCAGTATGCCATTAAATTTA+TGG + Chr7:33509902-33509921 MsG0780037805.01.T01:intron 30.0%
CCATAAATTTAATGGCATAC+TGG - Chr7:33509905-33509924 None:intergenic 30.0%
CCCACTATTCTTTAGTTAAA+GGG + Chr7:33509119-33509138 MsG0780037805.01.T01:intron 30.0%
CCCTTTAACTAAAGAATAGT+GGG - Chr7:33509122-33509141 None:intergenic 30.0%
CCTTTAACTAAAGAATAGTG+GGG - Chr7:33509121-33509140 None:intergenic 30.0%
CGAAACCGTTCAAATTAATA+TGG + Chr7:33506024-33506043 MsG0780037805.01.T01:intron 30.0%
CTATGAAAAAAACTAGTGTG+TGG - Chr7:33506808-33506827 None:intergenic 30.0%
CTTTAACTAAAGAATAGTGG+GGG - Chr7:33509120-33509139 None:intergenic 30.0%
GAAACCATTTCAACTTTCTT+TGG - Chr7:33512517-33512536 None:intergenic 30.0%
GGTAAAAATAAGTCATGAAG+TGG - Chr7:33507326-33507345 None:intergenic 30.0%
GTGCTATAAACCTCAAATTT+AGG - Chr7:33512475-33512494 None:intergenic 30.0%
GTTCCAAATGATTCATTTAG+AGG + Chr7:33512010-33512029 MsG0780037805.01.T01:CDS 30.0%
TAAAAATGTCCCACATTGAA+CGG - Chr7:33506777-33506796 None:intergenic 30.0%
TAACAAAAAAACGAGTGACT+TGG + Chr7:33510948-33510967 MsG0780037805.01.T01:intron 30.0%
TAACAAAAAACGAGTGACTT+GGG + Chr7:33506458-33506477 MsG0780037805.01.T01:intron 30.0%
TAGAAAGGACAAAATTCATG+TGG - Chr7:33511881-33511900 None:intergenic 30.0%
TCCAAAAACAACAAAGTAAG+AGG - Chr7:33505724-33505743 None:intergenic 30.0%
TCTACAATCAGAAAGAGAAA+AGG - Chr7:33512557-33512576 None:intergenic 30.0%
TCTCTTTCTGATTGTAGAAA+TGG + Chr7:33512559-33512578 MsG0780037805.01.T01:CDS 30.0%
TGAGAACAAAAATGTTGTGA+TGG + Chr7:33512189-33512208 MsG0780037805.01.T01:CDS 30.0%
TGTGTCTAACAAAAAAGCAA+TGG + Chr7:33512603-33512622 MsG0780037805.01.T01:CDS 30.0%
TTAAAAGATGGTGTGTTGAA+TGG + Chr7:33512373-33512392 MsG0780037805.01.T01:CDS 30.0%
TTACAAACTCTCCCTATAAA+AGG - Chr7:33506441-33506460 None:intergenic 30.0%
! ACATGATCAAGCATCTATTT+TGG + Chr7:33511691-33511710 MsG0780037805.01.T01:CDS 30.0%
! ATTGCTAAAGAGTATGAACT+TGG - Chr7:33508923-33508942 None:intergenic 30.0%
! GTATGTCAAAGAAAGTATGT+TGG - Chr7:33511364-33511383 None:intergenic 30.0%
! TTAGAGAGTGTATCTCTAAA+TGG - Chr7:33507524-33507543 None:intergenic 30.0%
! TTATCGATGACTGTGAATTT+TGG - Chr7:33509460-33509479 None:intergenic 30.0%
! TTCGGTGTAAAGAATCAAAT+GGG + Chr7:33506406-33506425 MsG0780037805.01.T01:intron 30.0%
! TTTCGGTGTAAAGAATCAAA+TGG + Chr7:33506405-33506424 MsG0780037805.01.T01:intron 30.0%
!!! AAACCATTTTGAAGTCAAGT+GGG - Chr7:33506882-33506901 None:intergenic 30.0%
!!! AACGCGTTTTGTTTCTTAAT+TGG + Chr7:33506507-33506526 MsG0780037805.01.T01:intron 30.0%
!!! ATGTTTTGGAGAAGTTAGAA+TGG - Chr7:33506102-33506121 None:intergenic 30.0%
!!! ATTTTTTGAGTTTGGGAAGA+AGG - Chr7:33511463-33511482 None:intergenic 30.0%
!!! GGAAAGAGATTTTTTGAGTT+TGG - Chr7:33511471-33511490 None:intergenic 30.0%
!!! TCCTCTTACTTTGTTGTTTT+TGG + Chr7:33505720-33505739 MsG0780037805.01.T01:CDS 30.0%
!!! TTAATCGAACAGTTTTAGCT+GGG - Chr7:33505906-33505925 None:intergenic 30.0%
!!! TTTTTTGAGTTTGGGAAGAA+GGG - Chr7:33511462-33511481 None:intergenic 30.0%
AAACAAAACGCGTTTGCTTA+AGG - Chr7:33506501-33506520 None:intergenic 35.0%
AAACTAGTGAAGAAGCAAGT+TGG - Chr7:33507695-33507714 None:intergenic 35.0%
AAAGCATATCCAGAAACTTC+CGG - Chr7:33511030-33511049 None:intergenic 35.0%
AAAGCATATCCAGAAACTTG+CGG - Chr7:33506539-33506558 None:intergenic 35.0%
AAATGAGATGACCCAAAAGA+GGG - Chr7:33511514-33511533 None:intergenic 35.0%
AACAAAAAACGAGTGACTTG+GGG + Chr7:33506459-33506478 MsG0780037805.01.T01:intron 35.0%
AAGAACACTCTTAATACCGA+AGG + Chr7:33506293-33506312 MsG0780037805.01.T01:intron 35.0%
AAGGATTTCCTTGTAGTCAA+AGG - Chr7:33508687-33508706 None:intergenic 35.0%
AAGTGTAAGAACACTTGAGA+TGG - Chr7:33508083-33508102 None:intergenic 35.0%
AATTCATGTGGCAAACAAAG+GGG - Chr7:33511869-33511888 None:intergenic 35.0%
AATTCATTGTGATAGTACCG+CGG - Chr7:33507616-33507635 None:intergenic 35.0%
ACAAAAAAACGAGTGACTTG+GGG + Chr7:33510950-33510969 MsG0780037805.01.T01:intron 35.0%
ACCCGATGAATACATATCAT+AGG + Chr7:33509235-33509254 MsG0780037805.01.T01:intron 35.0%
ACCTCAATAAGTAACTTCTC+CGG + Chr7:33510225-33510244 MsG0780037805.01.T01:intron 35.0%
ACTCAACCTAGTAACAACTT+CGG - Chr7:33505789-33505808 None:intergenic 35.0%
AGAACACTCTTAATACCGAA+GGG + Chr7:33506294-33506313 MsG0780037805.01.T01:intron 35.0%
AGTTGTCCCTAAACACATTA+AGG - Chr7:33510203-33510222 None:intergenic 35.0%
ATCCCAAGAAATAGGTTCAA+TGG - Chr7:33507348-33507367 None:intergenic 35.0%
ATCTCAAGTGTTCTTACACT+TGG + Chr7:33508082-33508101 MsG0780037805.01.T01:intron 35.0%
ATCTCAGATTCATTCCATAG+TGG + Chr7:33507729-33507748 MsG0780037805.01.T01:intron 35.0%
ATGCTATAGAAAGAGTCATG+AGG - Chr7:33507929-33507948 None:intergenic 35.0%
ATGTGAAAGTTGCCTTTCTA+TGG - Chr7:33508544-33508563 None:intergenic 35.0%
ATTCTGCCTTGAAATTCCAT+AGG + Chr7:33507133-33507152 MsG0780037805.01.T01:intron 35.0%
CAAGGATCCAAATGAATTAG+AGG + Chr7:33511916-33511935 MsG0780037805.01.T01:CDS 35.0%
CCATAATTCAGCATCCATTA+AGG + Chr7:33508853-33508872 MsG0780037805.01.T01:intron 35.0%
CCCCACTATTCTTTAGTTAA+AGG + Chr7:33509118-33509137 MsG0780037805.01.T01:intron 35.0%
CCCCTTTAACTAAAGAATAG+TGG - Chr7:33509123-33509142 None:intergenic 35.0%
CTATTAAGTCCTTTCGTCAA+AGG + Chr7:33507452-33507471 MsG0780037805.01.T01:intron 35.0%
CTCATGGTTGCAAAATCAAT+CGG - Chr7:33508766-33508785 None:intergenic 35.0%
CTTCGGTAGATAACAGAATT+TGG - Chr7:33505772-33505791 None:intergenic 35.0%
CTTGTTAAAAACAAGTCGGA+GGG + Chr7:33506343-33506362 MsG0780037805.01.T01:intron 35.0%
GACTATGAACTTAAGACCAA+GGG + Chr7:33506259-33506278 MsG0780037805.01.T01:intron 35.0%
GAGTACTATCGAGTTATGAA+TGG + Chr7:33508571-33508590 MsG0780037805.01.T01:intron 35.0%
GATCTATACTCTATGTTGAG+TGG - Chr7:33507222-33507241 None:intergenic 35.0%
GCCTATGATATGTATTCATC+GGG - Chr7:33509239-33509258 None:intergenic 35.0%
GGAAAAAGATTGCACTTTGA+TGG - Chr7:33509765-33509784 None:intergenic 35.0%
GGTATCTATTGCTTATGCAT+TGG + Chr7:33512141-33512160 MsG0780037805.01.T01:CDS 35.0%
GTAACAAAAAACGAGTGACT+TGG + Chr7:33506457-33506476 MsG0780037805.01.T01:intron 35.0%
GTGATAACACCATATTTGAG+TGG - Chr7:33506080-33506099 None:intergenic 35.0%
GTTAAAACAATTGGTACTGC+TGG + Chr7:33512445-33512464 MsG0780037805.01.T01:CDS 35.0%
TAACTCGATAGTACTCCAAA+TGG - Chr7:33508567-33508586 None:intergenic 35.0%
TACTATCGAGTTATGAATGG+CGG + Chr7:33508574-33508593 MsG0780037805.01.T01:intron 35.0%
TACTGGATATCTAGACATGT+TGG - Chr7:33509888-33509907 None:intergenic 35.0%
TATCTACCGAAGTTGTTACT+AGG + Chr7:33505780-33505799 MsG0780037805.01.T01:intron 35.0%
TCACAATGAATTAACACAGC+AGG + Chr7:33507624-33507643 MsG0780037805.01.T01:intron 35.0%
TCCCAAGAAATAGGTTCAAT+GGG - Chr7:33507347-33507366 None:intergenic 35.0%
TCGGTGTAAAGAATCAAATG+GGG + Chr7:33506407-33506426 MsG0780037805.01.T01:intron 35.0%
TCTATACTCTATGTTGAGTG+GGG - Chr7:33507220-33507239 None:intergenic 35.0%
TCTGATTGTAGAAATGGTGA+TGG + Chr7:33512565-33512584 MsG0780037805.01.T01:CDS 35.0%
TCTGGACTATATTTAGATCC+TGG - Chr7:33509291-33509310 None:intergenic 35.0%
TCTTCACTTGTCAACATTTG+TGG + Chr7:33512120-33512139 MsG0780037805.01.T01:CDS 35.0%
TGAATTAACACAGCAGGTAA+CGG + Chr7:33507630-33507649 MsG0780037805.01.T01:intron 35.0%
TGAATTTGTGTAGCTTCAGA+AGG - Chr7:33511644-33511663 None:intergenic 35.0%
TGGTCTTCATGGTTACTTAA+AGG + Chr7:33512406-33512425 MsG0780037805.01.T01:CDS 35.0%
TGTGCAAGTTTACTAGTAGA+CGG - Chr7:33507967-33507986 None:intergenic 35.0%
TGTTGAAGAAAAGTGAGGTT+TGG - Chr7:33511439-33511458 None:intergenic 35.0%
TGTTGAATGGAGCTGAAAAT+TGG + Chr7:33512386-33512405 MsG0780037805.01.T01:CDS 35.0%
TTAATCGAACAGTTGTAGCT+GGG - Chr7:33510453-33510472 None:intergenic 35.0%
TTTCGATATGCTATGTCTAC+CGG - Chr7:33510247-33510266 None:intergenic 35.0%
! AACGATTGAGCCATATTTTG+AGG - Chr7:33505965-33505984 None:intergenic 35.0%
! ACCCATTGAACCTATTTCTT+GGG + Chr7:33507343-33507362 MsG0780037805.01.T01:intron 35.0%
! ACTTGTTAAAAACAAGTCGG+AGG + Chr7:33506342-33506361 MsG0780037805.01.T01:intron 35.0%
! ATGGATATGATTTTCGTGAC+TGG + Chr7:33508617-33508636 MsG0780037805.01.T01:intron 35.0%
! CCATGAATCGCAAAATTTTC+AGG + Chr7:33508487-33508506 MsG0780037805.01.T01:intron 35.0%
! CCGATTCCTACAACATATTT+TGG + Chr7:33512247-33512266 MsG0780037805.01.T01:CDS 35.0%
! CCTGAAAATTTTGCGATTCA+TGG - Chr7:33508490-33508509 None:intergenic 35.0%
! CCTTAATGGATGCTGAATTA+TGG - Chr7:33508856-33508875 None:intergenic 35.0%
! GTAGTGCCATATTCATGTTT+TGG - Chr7:33506116-33506135 None:intergenic 35.0%
! GTCTAAAACCTTTGACTACA+AGG + Chr7:33508676-33508695 MsG0780037805.01.T01:intron 35.0%
! TAAAGGGACTAGTACTCTTA+TGG + Chr7:33508598-33508617 MsG0780037805.01.T01:intron 35.0%
! TACCCATTGAACCTATTTCT+TGG + Chr7:33507342-33507361 MsG0780037805.01.T01:intron 35.0%
! TCTTTTTCCACAAGAATGCA+TGG + Chr7:33509776-33509795 MsG0780037805.01.T01:intron 35.0%
! TTCTGGATATGCTTTTGGAT+CGG + Chr7:33506544-33506563 MsG0780037805.01.T01:intron 35.0%
! TTGAGTGATTGGTTAAAGCA+AGG + Chr7:33511947-33511966 MsG0780037805.01.T01:CDS 35.0%
! TTTTTGAACTTGGGATTGTC+TGG - Chr7:33509309-33509328 None:intergenic 35.0%
!! AACTTAGTTGACTTGACTCA+TGG - Chr7:33508782-33508801 None:intergenic 35.0%
!! ACGATTGAGCCATATTTTGA+GGG - Chr7:33505964-33505983 None:intergenic 35.0%
!! ATTGGCTTGTGAGAATCATT+AGG - Chr7:33511539-33511558 None:intergenic 35.0%
!! CAAGTTTCTGGATATGCTTT+TGG + Chr7:33506539-33506558 MsG0780037805.01.T01:intron 35.0%
!! GAAGTTTCTGGATATGCTTT+TGG + Chr7:33511030-33511049 MsG0780037805.01.T01:intron 35.0%
!! GACTCTAAGATTACTTCACT+AGG - Chr7:33507887-33507906 None:intergenic 35.0%
!! GTTAATCGAACAGTTTTAGC+TGG - Chr7:33505907-33505926 None:intergenic 35.0%
!! GTTACCGTTTTTCCAAACTA+TGG + Chr7:33511722-33511741 MsG0780037805.01.T01:CDS 35.0%
!! TATGCAAAGGTTCAAGTTGT+TGG - Chr7:33506958-33506977 None:intergenic 35.0%
!! TCTTCTAGTTCACCATAGAA+AGG + Chr7:33508529-33508548 MsG0780037805.01.T01:intron 35.0%
!! TGGAGAAAATGGACTAATTG+TGG + Chr7:33512318-33512337 MsG0780037805.01.T01:CDS 35.0%
!! TGTCAAAACAAAAGGGTACT+AGG + Chr7:33512083-33512102 MsG0780037805.01.T01:CDS 35.0%
!!! AACCATTTTGAAGTCAAGTG+GGG - Chr7:33506881-33506900 None:intergenic 35.0%
!!! AAGCATCGACTGTGAATTTT+CGG + Chr7:33506388-33506407 MsG0780037805.01.T01:intron 35.0%
!!! GAAACCATTTTGAAGTCAAG+TGG - Chr7:33506883-33506902 None:intergenic 35.0%
!!! GAGGTTTATAGCACTGATTT+TGG + Chr7:33512481-33512500 MsG0780037805.01.T01:CDS 35.0%
!!! TATAGCACTGATTTTGGTTG+TGG + Chr7:33512487-33512506 MsG0780037805.01.T01:CDS 35.0%
!!! TCACATCATGCTGTTTTAGA+TGG + Chr7:33511764-33511783 MsG0780037805.01.T01:CDS 35.0%
AACTTAAGACCAAGGGACTA+TGG + Chr7:33506266-33506285 MsG0780037805.01.T01:intron 40.0%
ACCGGAGAAGTTACTTATTG+AGG - Chr7:33510229-33510248 None:intergenic 40.0%
ACTAGTGAGTTCAACTCTCT+TGG + Chr7:33509262-33509281 MsG0780037805.01.T01:intron 40.0%
AGGCAACTTTCACATCCATT+TGG + Chr7:33508549-33508568 MsG0780037805.01.T01:intron 40.0%
AGTCTACCTTGCACAACTTT+GGG - Chr7:33505852-33505871 None:intergenic 40.0%
AGTTATGAATGGCGGCTAAA+GGG + Chr7:33508582-33508601 MsG0780037805.01.T01:intron 40.0%
ATGGTAAGAGACGACAGATA+AGG - Chr7:33507563-33507582 None:intergenic 40.0%
CAAATGAGATGACCCAAAAG+AGG - Chr7:33511515-33511534 None:intergenic 40.0%
CAACTTGAACCTTTGCATAG+TGG + Chr7:33506959-33506978 MsG0780037805.01.T01:intron 40.0%
CCTAAGTTCCACATTCGTAT+AGG + Chr7:33507161-33507180 MsG0780037805.01.T01:intron 40.0%
CCTATACGAATGTGGAACTT+AGG - Chr7:33507164-33507183 None:intergenic 40.0%
CCTATGAAAAGGTTTGTGTG+TGG - Chr7:33507045-33507064 None:intergenic 40.0%
CGAGATGTTATAGAACCTCA+AGG - Chr7:33508962-33508981 None:intergenic 40.0%
CGTATAGGTGAGTCTATCAA+GGG + Chr7:33507176-33507195 MsG0780037805.01.T01:intron 40.0%
CTAGTGAGTTCAACTCTCTT+GGG + Chr7:33509263-33509282 MsG0780037805.01.T01:intron 40.0%
CTTAATCTTTGCAATAGCCG+CGG + Chr7:33507596-33507615 MsG0780037805.01.T01:intron 40.0%
GAATACCTTCCACTATGCAA+AGG - Chr7:33506971-33506990 None:intergenic 40.0%
GAGAAAGTCCAAGAAACATC+CGG - Chr7:33507431-33507450 None:intergenic 40.0%
GAGAAGAGAGGAAAAAACAC+AGG + Chr7:33506365-33506384 MsG0780037805.01.T01:intron 40.0%
GAGTGTATCTCTAAATGGAG+CGG - Chr7:33507519-33507538 None:intergenic 40.0%
GATGTTATAGAACCTCAAGG+TGG - Chr7:33508959-33508978 None:intergenic 40.0%
GCACTACAACCACTCAAATA+TGG + Chr7:33506129-33506148 MsG0780037805.01.T01:intron 40.0%
GGACTATGAACTTAAGACCA+AGG + Chr7:33506258-33506277 MsG0780037805.01.T01:intron 40.0%
GGTAGTTCTTCTTGTGAAGA+TGG - Chr7:33505685-33505704 None:intergenic 40.0%
GTAACTAAAACCTGAAGGGA+CGG - Chr7:33508721-33508740 None:intergenic 40.0%
GTCGGATCTAATACATTCAG+TGG + Chr7:33508009-33508028 MsG0780037805.01.T01:intron 40.0%
GTCTCAGCACCATAATAGAA+TGG - Chr7:33506058-33506077 None:intergenic 40.0%
GTGGTATCACCATATTTGAG+TGG - Chr7:33506141-33506160 None:intergenic 40.0%
GTTAATCGAACAGTTGTAGC+TGG - Chr7:33510454-33510473 None:intergenic 40.0%
GTTCACCCGTTCACAAAATT+GGG + Chr7:33506687-33506706 MsG0780037805.01.T01:intron 40.0%
TAGACTCACCTATACGAATG+TGG - Chr7:33507172-33507191 None:intergenic 40.0%
TAGTCTACCTTGCACAACTT+TGG - Chr7:33505853-33505872 None:intergenic 40.0%
TAGTGAGTTCAACTCTCTTG+GGG + Chr7:33509264-33509283 MsG0780037805.01.T01:intron 40.0%
TCGTATAGGTGAGTCTATCA+AGG + Chr7:33507175-33507194 MsG0780037805.01.T01:intron 40.0%
TGGATATATCCGCAAGTTTC+TGG + Chr7:33506527-33506546 MsG0780037805.01.T01:intron 40.0%
TGGATATATCCGGAAGTTTC+TGG + Chr7:33511018-33511037 MsG0780037805.01.T01:intron 40.0%
TTAATACCGAAGGGACAGAA+AGG + Chr7:33506303-33506322 MsG0780037805.01.T01:intron 40.0%
TTAGCTGATCCTTTGACGAA+AGG - Chr7:33507464-33507483 None:intergenic 40.0%
TTCGGAGATCGAAAAGCTTA+AGG + Chr7:33512051-33512070 MsG0780037805.01.T01:CDS 40.0%
TTCTTAAGACCATAGTCCCT+TGG - Chr7:33506278-33506297 None:intergenic 40.0%
TTGAACGGTTTCGAATAGAG+CGG - Chr7:33506017-33506036 None:intergenic 40.0%
TTGTGTACCATGCATTCTTG+TGG - Chr7:33509786-33509805 None:intergenic 40.0%
TTTCACGACATCGACAATGT+CGG + Chr7:33507991-33508010 MsG0780037805.01.T01:intron 40.0%
! AGAGGAAGTGATGTTTCTGA+AGG - Chr7:33505706-33505725 None:intergenic 40.0%
! AGTGATTGGTTAAAGCAAGG+TGG + Chr7:33511950-33511969 MsG0780037805.01.T01:CDS 40.0%
! CCACACACAAACCTTTTCAT+AGG + Chr7:33507042-33507061 MsG0780037805.01.T01:intron 40.0%
! CCTAGAGCATTCGTTAAAAC+CGG - Chr7:33507112-33507131 None:intergenic 40.0%
! CTAGAGCATTCGTTAAAACC+GGG - Chr7:33507111-33507130 None:intergenic 40.0%
! GTAACGGTTTTTCCCATAGA+GGG + Chr7:33507646-33507665 MsG0780037805.01.T01:intron 40.0%
! TCTGGATATGCTTTTGGATC+GGG + Chr7:33506545-33506564 MsG0780037805.01.T01:intron 40.0%
! TTAGCTTTCTTACCACCTTG+AGG + Chr7:33508944-33508963 MsG0780037805.01.T01:intron 40.0%
! TTGAACCTTTGCATAGTGGA+AGG + Chr7:33506963-33506982 MsG0780037805.01.T01:intron 40.0%
!! AAGAAAAGTGAGGTTTGGTG+TGG - Chr7:33511434-33511453 None:intergenic 40.0%
!! AAGGGTGTTGAAGAAAAGTG+AGG - Chr7:33511444-33511463 None:intergenic 40.0%
!! AATGGTGATGGTGTTGAGAT+AGG + Chr7:33512577-33512596 MsG0780037805.01.T01:CDS 40.0%
!! CTCTTTTGGGTCATCTCATT+TGG + Chr7:33511513-33511532 MsG0780037805.01.T01:intron 40.0%
!! GAGCTGAAAATTGGTCTTCA+TGG + Chr7:33512395-33512414 MsG0780037805.01.T01:CDS 40.0%
!! GATATTGACTCAGTCCACTA+TGG - Chr7:33507746-33507765 None:intergenic 40.0%
!! TGCTGGTTCACCTAAATTTG+AGG + Chr7:33512462-33512481 MsG0780037805.01.T01:CDS 40.0%
!! TGGCTTTGAATATCGATTGC+CGG + Chr7:33512209-33512228 MsG0780037805.01.T01:CDS 40.0%
!!! ACCATTTTGAAGTCAAGTGG+GGG - Chr7:33506880-33506899 None:intergenic 40.0%
!!! GCTCTCTTTAAGACGTTTTG+TGG + Chr7:33510368-33510387 MsG0780037805.01.T01:intron 40.0%
AAGTCCAAGAAACATCCGGT+AGG - Chr7:33507427-33507446 None:intergenic 45.0%
ATGGGAAAAGTGACCTCCAA+GGG - Chr7:33506728-33506747 None:intergenic 45.0%
CAAGAAACATCCGGTAGGAT+GGG - Chr7:33507422-33507441 None:intergenic 45.0%
CACAAAATTGGGTACCCCAA+GGG + Chr7:33506698-33506717 MsG0780037805.01.T01:intron 45.0%
CGTTCACCCGTTCACAAAAT+TGG + Chr7:33506686-33506705 MsG0780037805.01.T01:intron 45.0%
GACTGGAGATCCCAAGAAAT+AGG - Chr7:33507356-33507375 None:intergenic 45.0%
GAGTTATGAATGGCGGCTAA+AGG + Chr7:33508581-33508600 MsG0780037805.01.T01:intron 45.0%
GCCAGTCCTATGGAATTTCA+AGG - Chr7:33507142-33507161 None:intergenic 45.0%
GCCTTGAAATTCCATAGGAC+TGG + Chr7:33507138-33507157 MsG0780037805.01.T01:intron 45.0%
GTGCTGAGACCACTCAAATA+TGG + Chr7:33506068-33506087 MsG0780037805.01.T01:intron 45.0%
TATGGGAAAAGTGACCTCCA+AGG - Chr7:33506729-33506748 None:intergenic 45.0%
TATTCATCAACCGTCCCTTC+AGG + Chr7:33508708-33508727 MsG0780037805.01.T01:intron 45.0%
TCACAAAATTGGGTACCCCA+AGG + Chr7:33506697-33506716 MsG0780037805.01.T01:intron 45.0%
TCCCCCACTTGACTTCAAAA+TGG + Chr7:33506876-33506895 MsG0780037805.01.T01:intron 45.0%
TCGGCTGATCTAAACGATTC+CGG - Chr7:33512231-33512250 None:intergenic 45.0%
TCTACTCCTTTCTGTCCCTT+CGG - Chr7:33506312-33506331 None:intergenic 45.0%
TGCACATTGAGCATCACTAG+AGG - Chr7:33507789-33507808 None:intergenic 45.0%
TTCGCTTCGCTCTTTGTCAA+AGG + Chr7:33512631-33512650 MsG0780037805.01.T01:CDS 45.0%
TTGATCGAAGCCACTCGATA+CGG + Chr7:33505984-33506003 MsG0780037805.01.T01:intron 45.0%
TTTGTTACGCGTAGCGCTTA+CGG + Chr7:33506587-33506606 MsG0780037805.01.T01:intron 45.0%
! AATGGGAGCACGACATTAGT+GGG - Chr7:33509081-33509100 None:intergenic 45.0%
! ATATGCTTTTGGATCGGGTC+GGG + Chr7:33506550-33506569 MsG0780037805.01.T01:intron 45.0%
! CTAAAAGCCCGTGCGTTTTA+AGG + Chr7:33507071-33507090 MsG0780037805.01.T01:intron 45.0%
! GATATGCTTTTGGATCGGGT+CGG + Chr7:33506549-33506568 MsG0780037805.01.T01:intron 45.0%
! GGGTACCCAATTTTGTGAAC+GGG - Chr7:33506695-33506714 None:intergenic 45.0%
! TAATGGGAGCACGACATTAG+TGG - Chr7:33509082-33509101 None:intergenic 45.0%
! TACCATCACTTGTGGGCTAT+AGG + Chr7:33507389-33507408 MsG0780037805.01.T01:intron 45.0%
!! AGGGACGGTTGATGAATACA+AGG - Chr7:33508706-33508725 None:intergenic 45.0%
!! CCGGTTTTAACGAATGCTCT+AGG + Chr7:33507109-33507128 MsG0780037805.01.T01:intron 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG + Chr7:33505821-33505840 MsG0780037805.01.T01:intron 45.0%
!! GGGGTACCCAATTTTGTGAA+CGG - Chr7:33506696-33506715 None:intergenic 45.0%
!! GGTAACGGTTTTTCCCATAG+AGG + Chr7:33507645-33507664 MsG0780037805.01.T01:intron 45.0%
!!! TAGCTGGGCTTGTTTTATCC+TGG - Chr7:33505891-33505910 None:intergenic 45.0%
AAAACCGGGATACACGTGCA+GGG - Chr7:33507097-33507116 None:intergenic 50.0%
ACGTCTTAAAGAGAGCGACC+TGG - Chr7:33510364-33510383 None:intergenic 50.0%
AGGCATTAGTCCCATCCTAC+CGG + Chr7:33507409-33507428 MsG0780037805.01.T01:intron 50.0%
CATGATCCTGCAGCGAAAGA+AGG - Chr7:33507270-33507289 None:intergenic 50.0%
CCAAGAAACATCCGGTAGGA+TGG - Chr7:33507423-33507442 None:intergenic 50.0%
CCATCCTACCGGATGTTTCT+TGG + Chr7:33507420-33507439 MsG0780037805.01.T01:intron 50.0%
CTTGGGATCTCCAGTCATCT+AGG + Chr7:33507360-33507379 MsG0780037805.01.T01:intron 50.0%
GAAGTCAAGTGGGGGATTGT+TGG - Chr7:33506872-33506891 None:intergenic 50.0%
GAGCATCATTGGCAGCACTT+AGG - Chr7:33508039-33508058 None:intergenic 50.0%
GATCTCCAGTCATCTAGGTC+GGG + Chr7:33507365-33507384 MsG0780037805.01.T01:intron 50.0%
GCACTACCCAAAGTTGTGCA+AGG + Chr7:33505843-33505862 MsG0780037805.01.T01:intron 50.0%
GCTAGCTGAGATCCCTCTAT+GGG - Chr7:33507661-33507680 None:intergenic 50.0%
GGATCTCCAGTCATCTAGGT+CGG + Chr7:33507364-33507383 MsG0780037805.01.T01:intron 50.0%
GTCGGGTTACCATCACTTGT+GGG + Chr7:33507382-33507401 MsG0780037805.01.T01:intron 50.0%
TAAAACCGGGATACACGTGC+AGG - Chr7:33507098-33507117 None:intergenic 50.0%
TAGAGGGATCTCAGCTAGCA+AGG + Chr7:33507662-33507681 MsG0780037805.01.T01:intron 50.0%
TGCCTATAGCCCACAAGTGA+TGG - Chr7:33507394-33507413 None:intergenic 50.0%
TGCTAGCTGAGATCCCTCTA+TGG - Chr7:33507662-33507681 None:intergenic 50.0%
TGGAACTTAGGCCAGTCCTA+TGG - Chr7:33507152-33507171 None:intergenic 50.0%
TTGGGGTGACCGTTCAATGT+GGG + Chr7:33506765-33506784 MsG0780037805.01.T01:intron 50.0%
! ATGGGAGCACGACATTAGTG+GGG - Chr7:33509080-33509099 None:intergenic 50.0%
! GGGCGAGCTCTCCTTTTATA+GGG + Chr7:33506427-33506446 MsG0780037805.01.T01:intron 50.0%
! TACTAGGTTGAGTCACGACC+AGG + Chr7:33510343-33510362 MsG0780037805.01.T01:intron 50.0%
!! AAGAATAGTGGGGGCACTAG+TGG - Chr7:33509111-33509130 None:intergenic 50.0%
!! AGAATAGTGGGGGCACTAGT+GGG - Chr7:33509110-33509129 None:intergenic 50.0%
!!! CTGGGCTTGTTTTATCCTGG+AGG - Chr7:33505888-33505907 None:intergenic 50.0%
!!! GGCTTGTTTTATCCTGGAGG+CGG - Chr7:33505885-33505904 None:intergenic 50.0%
ACAAGTCGGAGGGAGAAGAG+AGG + Chr7:33506353-33506372 MsG0780037805.01.T01:intron 55.0%
CCTCATCCTTCTTTCGCTGC+AGG + Chr7:33507261-33507280 MsG0780037805.01.T01:intron 55.0%
CCTGCAGCGAAAGAAGGATG+AGG - Chr7:33507264-33507283 None:intergenic 55.0%
CGGTTACGTACCGTATCGAG+TGG - Chr7:33505997-33506016 None:intergenic 55.0%
GGTAACCCGACCTAGATGAC+TGG - Chr7:33507373-33507392 None:intergenic 55.0%
GGTCGGGTTACCATCACTTG+TGG + Chr7:33507381-33507400 MsG0780037805.01.T01:intron 55.0%
GTGCAGGGCCTTAAAACGCA+CGG - Chr7:33507082-33507101 None:intergenic 55.0%
GTTCAACTCTCTTGGGGTCC+AGG + Chr7:33509270-33509289 MsG0780037805.01.T01:intron 55.0%
GTTGGGGTGACCGTTCAATG+TGG + Chr7:33506764-33506783 MsG0780037805.01.T01:intron 55.0%
TGAGTGGGGTACACAGCTAC+AGG - Chr7:33507206-33507225 None:intergenic 55.0%
TGCAGGGCCTTAAAACGCAC+GGG - Chr7:33507081-33507100 None:intergenic 55.0%
! GCACTAGTGGGGGCTCTAAT+GGG - Chr7:33509098-33509117 None:intergenic 55.0%
! GGGGCGAGCTCTCCTTTTAT+AGG + Chr7:33506426-33506445 MsG0780037805.01.T01:intron 55.0%
! TGGGAGCACGACATTAGTGG+GGG - Chr7:33509079-33509098 None:intergenic 55.0%
!! AATAGTGGGGGCACTAGTGG+GGG - Chr7:33509108-33509127 None:intergenic 55.0%
!! GAATAGTGGGGGCACTAGTG+GGG - Chr7:33509109-33509128 None:intergenic 55.0%
AAGGCCCTGCACGTGTATCC+CGG + Chr7:33507090-33507109 MsG0780037805.01.T01:intron 60.0%
! ACCTCCAAGGGTGTGCCCTT+GGG - Chr7:33506716-33506735 None:intergenic 60.0%
! GGCACTAGTGGGGGCTCTAA+TGG - Chr7:33509099-33509118 None:intergenic 60.0%
! GTTTTATCCTGGAGGCGGCG+TGG - Chr7:33505880-33505899 None:intergenic 60.0%
CTATCAACCACGCCGCCTCC+AGG + Chr7:33505870-33505889 MsG0780037805.01.T01:intron 65.0%
! CCTCCAAGGGTGTGCCCTTG+GGG - Chr7:33506715-33506734 None:intergenic 65.0%
! GACCTCCAAGGGTGTGCCCT+TGG - Chr7:33506717-33506736 None:intergenic 65.0%
! GTACCCCAAGGGCACACCCT+TGG + Chr7:33506709-33506728 MsG0780037805.01.T01:intron 65.0%
! CCCCAAGGGCACACCCTTGG+AGG + Chr7:33506712-33506731 MsG0780037805.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 33505649 33512666 33505649 ID=MsG0780037805.01;Name=MsG0780037805.01
Chr7 mRNA 33505649 33512666 33505649 ID=MsG0780037805.01.T01;Parent=MsG0780037805.01;Name=MsG0780037805.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|0|0|2|0|413
Chr7 exon 33505649 33505777 33505649 ID=MsG0780037805.01.T01:exon:837;Parent=MsG0780037805.01.T01
Chr7 exon 33511554 33512666 33511554 ID=MsG0780037805.01.T01:exon:836;Parent=MsG0780037805.01.T01
Chr7 CDS 33505649 33505777 33505649 ID=MsG0780037805.01.T01:cds;Parent=MsG0780037805.01.T01
Chr7 CDS 33511554 33512666 33511554 ID=MsG0780037805.01.T01:cds;Parent=MsG0780037805.01.T01
Gene Sequence

>MsG0780037805.01.T01

ATGTCGAAAATCATAGAAATTTTCAATGTAGAACCATCTTCACAAGAAGAACTACCTTCAGAAACATCACTTCCTCTTACTTTGTTGTTTTTGGATTTCCAAACTGTTAAATTTGGATTTCCAAATTCTCCAATCATTAAATTCATCAAAGGAAACACTCTTTCACTTACAATAGCTGAATCTGATTCTGATTTCAATTATCTATCTGGTAAGAATCCTTCTGAAGCTACACAAATTCATGATCTTTTACCTAACTTGAATATTTCACATGATCAAGCATCTATTTTGGCTCTTCAAGTTACCGTTTTTCCAAACTATGGATATTCAATTGGTATTACTTCACATCATGCTGTTTTAGATGGTAAAACATCAACTTCTTTTATCAAATCTTGGGCTTACTTATGTAGAAAGCTTGAAAATGAAGTATCTGAATTAGAATCACCCCTTTGTTTGCCACATGAATTTTGTCCTTTCTATGATAGAAAAGTAATCAAGGATCCAAATGAATTAGAGGCAAAATATTTGAGTGATTGGTTAAAGCAAGGTGGAACCAACAATAGAAGCTTAATGGTTTGGGATCTTCAAGTTCCAAATGATTCATTTAGAGGGTTATTTCAATTATCTCGTTCGGAGATCGAAAAGCTTAAGGAATTTGTAGTGTCAAAACAAAAGGGTACTAGGAATGAGAATAAAAATCTTCACTTGTCAACATTTGTGGTATCTATTGCTTATGCATTGGTATGTAGAATGAAAGCAGAGAAAATTGAGAACAAAAATGTTGTGATGGCTTTGAATATCGATTGCCGGAATCGTTTAGATCAGCCGATTCCTACAACATATTTTGGAAATTGTATTGGAGGAAGACTTGCAAGTTTTGAAACAAGTGAGTTATTTGGAGAAAATGGACTAATTGTGGCTGTTGAAGTGTTGAGTGAAGCTTTGAAAACTTTAAAAGATGGTGTGTTGAATGGAGCTGAAAATTGGTCTTCATGGTTACTTAAAGGTCTTGCCATTGCTGATGTTAAAACAATTGGTACTGCTGGTTCACCTAAATTTGAGGTTTATAGCACTGATTTTGGTTGTGGAAAACCAAAGAAAGTTGAAATGGTTTCTATAGATAGAACTGGTGCCTTTTCTCTTTCTGATTGTAGAAATGGTGATGGTGTTGAGATAGGTTTTGTGTCTAACAAAAAAGCAATGGAAGCTTTCGCTTCGCTCTTTGTCAAAGGCATTGCATCTTGA
Protein sequence

>MsG0780037805.01.T01

MSKIIEIFNVEPSSQEELPSETSLPLTLLFLDFQTVKFGFPNSPIIKFIKGNTLSLTIAESDSDFNYLSGKNPSEATQIHDLLPNLNISHDQASILALQVTVFPNYGYSIGITSHHAVLDGKTSTSFIKSWAYLCRKLENEVSELESPLCLPHEFCPFYDRKVIKDPNELEAKYLSDWLKQGGTNNRSLMVWDLQVPNDSFRGLFQLSRSEIEKLKEFVVSKQKGTRNENKNLHLSTFVVSIAYALVCRMKAEKIENKNVVMALNIDCRNRLDQPIPTTYFGNCIGGRLASFETSELFGENGLIVAVEVLSEALKTLKDGVLNGAENWSSWLLKGLAIADVKTIGTAGSPKFEVYSTDFGCGKPKKVEMVSIDRTGAFSLSDCRNGDGVEIGFVSNKKAMEAFASLFVKGIAS*