AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037985.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037985.01.T01 MTR_0092s0100 95.777 734 20 3 1 731 7 732 0.0 1428
MsG0780037985.01.T01 MTR_0092s0100 95.777 734 20 3 1 731 4 729 0.0 1427
MsG0780037985.01.T01 MTR_4g026485 54.159 541 185 13 206 731 133 625 5.62e-178 523
MsG0780037985.01.T01 MTR_0092s0060 95.109 184 7 1 1 184 4 185 2.31e-119 356
MsG0780037985.01.T01 MTR_8g077940 36.216 370 219 11 372 731 180 542 3.11e-60 212
MsG0780037985.01.T01 MTR_7g027190 27.169 438 267 11 319 731 264 674 1.46e-36 147
MsG0780037985.01.T01 MTR_3g065980 28.684 380 243 7 371 730 169 540 2.34e-36 144
MsG0780037985.01.T01 MTR_3g056110 26.790 377 249 9 373 730 174 542 1.22e-32 133
MsG0780037985.01.T01 MTR_5g058860 29.949 394 232 15 371 731 116 498 7.04e-30 124
MsG0780037985.01.T01 MTR_4g076020 28.649 370 221 13 377 730 87 429 7.87e-30 123
MsG0780037985.01.T01 MTR_5g094450 25.469 373 259 7 375 730 162 532 3.14e-29 123
MsG0780037985.01.T01 MTR_4g077760 30.133 375 238 12 371 730 190 555 4.52e-29 122
MsG0780037985.01.T01 MTR_3g089055 27.957 372 247 9 375 730 204 570 2.07e-28 120
MsG0780037985.01.T01 MTR_3g072710 27.681 401 234 16 371 731 117 501 2.34e-28 120
MsG0780037985.01.T01 MTR_3g089055 27.957 372 247 9 375 730 199 565 2.45e-28 120
MsG0780037985.01.T01 MTR_5g097480 23.662 355 254 7 390 730 193 544 1.19e-26 115
MsG0780037985.01.T01 MTR_2g082090 25.714 385 268 8 360 729 197 578 2.45e-26 114
MsG0780037985.01.T01 MTR_1g029420 27.128 376 245 12 375 730 226 592 6.29e-26 113
MsG0780037985.01.T01 MTR_8g093070 26.810 373 252 9 368 729 133 495 7.19e-26 112
MsG0780037985.01.T01 MTR_7g074650 26.359 368 241 9 377 730 441 792 1.81e-25 112
MsG0780037985.01.T01 MTR_4g133660 24.409 381 252 9 375 731 176 544 4.99e-25 110
MsG0780037985.01.T01 MTR_2g026250 25.066 379 256 10 373 731 227 597 1.05e-24 109
MsG0780037985.01.T01 MTR_4g104020 25.773 388 249 12 371 731 146 521 9.02e-24 106
MsG0780037985.01.T01 MTR_4g102790 24.074 378 263 7 371 729 289 661 9.76e-24 107
MsG0780037985.01.T01 MTR_5g019750 30.303 231 148 6 508 731 71 295 2.27e-23 101
MsG0780037985.01.T01 MTR_1g069725 28.533 375 238 15 371 731 106 464 1.74e-22 101
MsG0780037985.01.T01 MTR_8g442410 23.316 386 258 10 371 730 152 525 1.18e-19 93.6
MsG0780037985.01.T01 MTR_2g097473 23.358 411 278 11 347 729 252 653 2.07e-19 93.2
MsG0780037985.01.T01 MTR_2g034250 24.672 381 266 8 370 730 206 585 3.31e-19 92.4
MsG0780037985.01.T01 MTR_2g034280 23.969 388 270 10 360 730 196 575 3.47e-19 92.4
MsG0780037985.01.T01 MTR_4g097080 22.251 391 273 12 361 730 123 503 3.64e-19 92.0
MsG0780037985.01.T01 MTR_2g034260 24.675 385 260 11 370 730 206 584 4.22e-19 92.0
MsG0780037985.01.T01 MTR_1g096030 26.276 392 246 14 371 729 77 458 4.92e-19 91.3
MsG0780037985.01.T01 MTR_7g109580 25.201 373 254 12 375 730 190 554 2.16e-18 89.7
MsG0780037985.01.T01 MTR_4g064200 23.989 371 260 8 375 729 285 649 1.54e-17 87.4
MsG0780037985.01.T01 MTR_2g097467 23.114 411 279 11 347 729 252 653 2.35e-17 86.7
MsG0780037985.01.T01 MTR_2g097410 23.097 381 255 9 375 729 372 740 3.29e-17 86.7
MsG0780037985.01.T01 MTR_2g097390 24.933 373 254 11 375 729 276 640 3.42e-17 86.3
MsG0780037985.01.T01 MTR_2g097310 23.822 382 247 9 375 729 273 637 6.81e-17 85.5
MsG0780037985.01.T01 MTR_2g097463 22.520 373 262 8 375 729 291 654 7.27e-17 85.1
MsG0780037985.01.T01 MTR_7g062120 22.222 378 262 6 375 730 373 740 9.19e-17 85.1
MsG0780037985.01.T01 MTR_4g064160 22.705 414 278 11 345 729 283 683 1.15e-16 84.7
MsG0780037985.01.T01 MTR_2g099110 20.788 457 293 11 320 730 18 451 2.50e-16 82.8
MsG0780037985.01.T01 MTR_2g097380 23.546 361 231 9 382 729 232 560 1.17e-15 81.3
MsG0780037985.01.T01 MTR_4g064180 22.703 370 264 9 375 725 255 621 2.22e-15 80.5
MsG0780037985.01.T01 MTR_2g089100 23.775 408 240 15 375 729 53 442 2.71e-15 79.3
MsG0780037985.01.T01 MTR_4g064150 22.043 372 272 6 375 729 362 732 9.31e-15 78.6
MsG0780037985.01.T01 MTR_4g076140 34.118 170 104 2 351 512 19 188 9.76e-15 77.8
MsG0780037985.01.T01 MTR_4g064120 21.680 369 269 7 375 725 255 621 1.56e-14 77.8
MsG0780037985.01.T01 MTR_2g097350 24.403 377 251 14 375 729 275 639 4.32e-14 76.3
MsG0780037985.01.T01 MTR_1g086970 23.934 422 279 17 339 730 69 478 6.85e-14 75.1
MsG0780037985.01.T01 MTR_5g009080 28.205 195 134 2 351 543 33 223 2.12e-13 73.6
MsG0780037985.01.T01 MTR_5g015490 21.465 396 251 11 375 730 115 490 3.54e-13 73.2
MsG0780037985.01.T01 MTR_3g022830 31.724 145 89 2 375 513 26 166 2.14e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037985.01.T01 AT4G00150 57.179 397 139 11 338 731 187 555 6.47e-139 420
MsG0780037985.01.T01 AT2G45160 48.283 466 200 16 289 731 193 640 3.08e-121 377
MsG0780037985.01.T01 AT3G60630 44.773 507 200 16 268 731 154 623 7.93e-113 355
MsG0780037985.01.T01 AT4G36710 33.600 375 221 13 372 730 123 485 1.69e-55 198
MsG0780037985.01.T01 AT2G01570 30.108 372 237 9 371 730 221 581 2.06e-34 139
MsG0780037985.01.T01 AT5G17490 29.521 376 233 13 371 730 157 516 7.88e-32 130
MsG0780037985.01.T01 AT5G66770 27.750 400 252 13 353 730 200 584 1.14e-31 131
MsG0780037985.01.T01 AT3G03450 27.851 377 244 10 371 730 180 545 1.69e-31 130
MsG0780037985.01.T01 AT2G04890 26.005 373 246 8 375 730 54 413 2.72e-30 124
MsG0780037985.01.T01 AT1G14920 27.056 377 242 9 371 730 169 529 1.12e-29 124
MsG0780037985.01.T01 AT3G50650 29.508 366 231 10 384 730 185 542 2.28e-29 124
MsG0780037985.01.T01 AT5G41920 25.886 367 259 7 371 730 40 400 4.40e-29 120
MsG0780037985.01.T01 AT3G54220 27.348 362 246 8 377 729 296 649 7.37e-29 123
MsG0780037985.01.T01 AT1G66350 26.415 371 248 10 371 731 152 507 2.24e-28 120
MsG0780037985.01.T01 AT5G48150 24.462 372 261 8 375 730 123 490 2.35e-28 120
MsG0780037985.01.T01 AT5G48150 24.462 372 261 8 375 730 123 490 2.35e-28 120
MsG0780037985.01.T01 AT5G48150 24.462 372 261 8 375 730 123 490 2.35e-28 120
MsG0780037985.01.T01 AT5G48150 24.462 372 261 8 375 730 123 490 2.35e-28 120
MsG0780037985.01.T01 AT4G08250 28.846 416 260 16 344 729 67 476 1.24e-27 117
MsG0780037985.01.T01 AT1G50600 24.194 372 261 7 375 730 160 526 1.77e-27 117
MsG0780037985.01.T01 AT1G50600 24.194 372 261 7 375 730 231 597 3.87e-27 117
MsG0780037985.01.T01 AT1G21450 25.061 411 270 11 348 730 193 593 4.61e-27 117
MsG0780037985.01.T01 AT1G50600 24.194 372 261 7 375 730 235 601 5.31e-27 117
MsG0780037985.01.T01 AT4G17230 26.178 382 241 8 375 730 159 525 1.93e-26 114
MsG0780037985.01.T01 AT4G17230 26.178 382 241 8 375 730 159 525 1.93e-26 114
MsG0780037985.01.T01 AT5G59450 23.810 420 279 11 341 730 190 598 1.58e-23 106
MsG0780037985.01.T01 AT1G55580 24.771 327 220 6 420 730 129 445 1.03e-19 93.2
MsG0780037985.01.T01 AT1G63100 24.747 396 245 14 371 729 249 628 1.54e-19 93.6
MsG0780037985.01.T01 AT1G63100 24.747 396 245 14 371 729 274 653 1.55e-19 94.0
MsG0780037985.01.T01 AT1G07520 21.600 375 265 9 379 729 323 692 6.30e-19 92.0
MsG0780037985.01.T01 AT1G07520 21.600 375 265 9 379 729 324 693 6.76e-19 92.0
MsG0780037985.01.T01 AT1G07520 21.390 374 267 8 379 729 159 528 8.23e-19 90.9
MsG0780037985.01.T01 AT1G07520 21.390 374 267 8 379 729 159 528 8.23e-19 90.9
MsG0780037985.01.T01 AT3G46600 22.762 391 274 9 363 730 194 579 1.78e-17 87.0
MsG0780037985.01.T01 AT3G46600 22.762 391 274 9 363 730 162 547 5.81e-17 85.1
MsG0780037985.01.T01 AT3G46600 22.849 372 266 8 375 730 5 371 1.09e-16 83.2
MsG0780037985.01.T01 AT1G07530 23.342 377 258 9 375 729 397 764 1.43e-16 84.7
MsG0780037985.01.T01 AT4G37650 22.335 394 257 10 375 730 147 529 1.87e-15 80.5
MsG0780037985.01.T01 AT1G50420 29.897 194 116 5 371 553 54 238 3.26e-15 79.3
MsG0780037985.01.T01 AT5G52510 23.274 391 246 12 375 730 269 640 2.31e-13 73.9
MsG0780037985.01.T01 AT2G29065 21.485 377 272 7 375 729 253 627 3.61e-13 73.6

Find 150 sgRNAs with CRISPR-Local

Find 186 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTGTGAAGAACTGAAATT+AGG 0.187840 7:-37708882 None:intergenic
GGAAAAGGTGTGTTAGATTT+TGG 0.194202 7:+37708243 MsG0780037985.01.T01:CDS
GGCAATTGAGAAGCTTGTTT+TGG 0.238119 7:+37710171 MsG0780037985.01.T01:CDS
AAGTTACCATTTGAAGAAAT+AGG 0.249425 7:-37708753 None:intergenic
AGTCTCTGAATTCTGTTTCA+TGG 0.261651 7:+37709864 MsG0780037985.01.T01:CDS
ATTTGTTCTGATTTCCCTTT+TGG 0.265105 7:+37708831 MsG0780037985.01.T01:CDS
TCTTCGCCGCCACCGCTTCC+AGG 0.266115 7:-37709275 None:intergenic
TTCCATTATCAATTTCAATA+TGG 0.276508 7:-37708604 None:intergenic
AATTCCGAAGATACCCTTCT+TGG 0.278051 7:+37709124 MsG0780037985.01.T01:CDS
TTCCATATTGAAATTGATAA+TGG 0.285700 7:+37708602 MsG0780037985.01.T01:CDS
GCTTCCCCATAGGAGAAATT+TGG 0.291304 7:-37709412 None:intergenic
GCATAAACTGAGCTTGGTTT+TGG 0.318676 7:-37708995 None:intergenic
GTAGGAGTGGTTTGTTGATT+TGG 0.323080 7:-37708399 None:intergenic
AGATATTGAAGATGCATCTA+TGG 0.323147 7:+37708626 MsG0780037985.01.T01:CDS
AATGGCGCATAAGCAGAAAA+TGG 0.330464 7:+37709247 MsG0780037985.01.T01:CDS
GTTTATGCCTAACCCTAGTT+TGG 0.334769 7:+37709010 MsG0780037985.01.T01:CDS
GAAGATACCCTTCTTGGATT+CGG 0.340738 7:+37709130 MsG0780037985.01.T01:CDS
GGAACACGCGCAAGGGATAT+TGG 0.347128 7:+37709376 MsG0780037985.01.T01:CDS
CAACAAGATGTTGAATTCAA+TGG 0.350188 7:+37708693 MsG0780037985.01.T01:CDS
CTTGTGAAGAACTGAAATTA+GGG 0.351845 7:-37708881 None:intergenic
AAAACAAGCTTCTCAATTGC+CGG 0.355848 7:-37710169 None:intergenic
AAGATACCCTTCTTGGATTC+GGG 0.361865 7:+37709131 MsG0780037985.01.T01:CDS
TGTTTGGTGCAGAGGATTCC+TGG 0.364499 7:+37710298 MsG0780037985.01.T01:CDS
TTTGCACTCCAGTCTTATTC+CGG 0.364854 7:+37710067 MsG0780037985.01.T01:CDS
AGTTACCATTTGAAGAAATA+GGG 0.368741 7:-37708752 None:intergenic
CGGGTCAAGAGATGTTTCTT+AGG 0.388186 7:+37709150 MsG0780037985.01.T01:CDS
ATCGGTAGAAGCGCCGCCTC+CGG 0.394887 7:-37708457 None:intergenic
CAATCACCAAATTTCTCCTA+TGG 0.395643 7:+37709406 MsG0780037985.01.T01:CDS
ACTTATAGACGCCGGTAATC+CGG 0.404547 7:+37709355 MsG0780037985.01.T01:CDS
CTTGACCCTATTTCTTCAAA+TGG 0.407880 7:+37708747 MsG0780037985.01.T01:CDS
AATATCCCTTGCGCGTGTTC+CGG 0.413029 7:-37709374 None:intergenic
TTTCCTATGTATTCTTCAAA+AGG 0.413997 7:-37708225 None:intergenic
AAATTTGCAAACTGCAGAAC+AGG 0.415407 7:-37709578 None:intergenic
TATGTATTCTTCAAAAGGTA+AGG 0.415901 7:-37708220 None:intergenic
GGGAACCCTGGAAGCGGTGG+CGG 0.418143 7:+37709269 MsG0780037985.01.T01:CDS
AAGATGTGGAATGGAGGATT+GGG 0.422443 7:+37708539 MsG0780037985.01.T01:CDS
TTGCGCGTGTTCCGGATTAC+CGG 0.426339 7:-37709366 None:intergenic
ATGGCGCATAAGCAGAAAAT+GGG 0.428884 7:+37709248 MsG0780037985.01.T01:CDS
AGAGTCGCAGGCAGAGTGTT+TGG 0.429838 7:+37710282 MsG0780037985.01.T01:CDS
CCACAGCTTCAAGCAATGCT+TGG 0.439953 7:-37709610 None:intergenic
TAATTTGAGAAAGAGCAAAT+AGG 0.442683 7:-37709929 None:intergenic
AGCTTGTGGTATGTTTCTGT+TGG 0.443296 7:-37708508 None:intergenic
ACTAGCCTCTTGCTCAAGAT+TGG 0.445518 7:+37709527 MsG0780037985.01.T01:CDS
TCGATCATCTGAAGTACATC+CGG 0.446716 7:-37710130 None:intergenic
ATCTCATCTCGGTTTCAACT+TGG 0.447156 7:+37710380 MsG0780037985.01.T01:CDS
GTGGCTGAAGCTGAATCTCT+TGG 0.455539 7:-37709067 None:intergenic
AAAGATGTGGAATGGAGGAT+TGG 0.456441 7:+37708538 MsG0780037985.01.T01:CDS
TTTGAAGAATACATAGGAAA+AGG 0.459740 7:+37708228 MsG0780037985.01.T01:CDS
TTCATCCCTCTACTACCAAA+AGG 0.463150 7:-37708846 None:intergenic
TCACAAGTTTCACTTTCTCA+TGG 0.465348 7:+37708897 MsG0780037985.01.T01:CDS
TTTGGGCCGTTTGGGTTCGC+AGG 0.468143 7:+37710189 MsG0780037985.01.T01:CDS
GGTGCAGAGGATTCCTGGTA+GGG 0.470286 7:+37710303 MsG0780037985.01.T01:CDS
ATCAAGTGATTCAAGCAAAC+CGG 0.470386 7:-37710086 None:intergenic
TCGCAATCGCGTAGTGGCTG+CGG 0.474481 7:-37709887 None:intergenic
GGTTAGGCATAAACTGAGCT+TGG 0.478491 7:-37709001 None:intergenic
TTCTATCCTGCGAACCCAAA+CGG 0.480883 7:-37710195 None:intergenic
CTCAATTTCATCGTGGTGTG+AGG 0.481171 7:-37709762 None:intergenic
AGGGAAAATTGTTGCTATGC+GGG 0.481377 7:+37708336 MsG0780037985.01.T01:CDS
CCATTGGCCTCTGCTGCAGA+TGG 0.483207 7:-37709229 None:intergenic
CGCAGGATAGAACACTTCCT+TGG 0.483347 7:+37710206 MsG0780037985.01.T01:CDS
GCCTAAAATTGTCGTAACAT+TGG 0.487648 7:+37709997 MsG0780037985.01.T01:CDS
AGCTTCAAGCAATGCTTGGT+TGG 0.488113 7:-37709606 None:intergenic
CGCTTGTCTTGTGTTGGCAA+AGG 0.491242 7:+37710353 MsG0780037985.01.T01:CDS
AGAATTCGCTTGTCTTGTGT+TGG 0.495542 7:+37710347 MsG0780037985.01.T01:CDS
TGGTGCAGAGGATTCCTGGT+AGG 0.496504 7:+37710302 MsG0780037985.01.T01:CDS
ACGCGATTGCGAAGCAGTTG+TGG 0.497464 7:+37709898 MsG0780037985.01.T01:CDS
TCACACGGTAGCGCCGGAGG+CGG 0.497760 7:+37708444 MsG0780037985.01.T01:CDS
CTTTGCGCCGGTGGTGCTAT+CGG 0.499180 7:-37708475 None:intergenic
ATCTTGAGCAAGAGGCTAGT+TGG 0.505941 7:-37709524 None:intergenic
AATCACCAAATTTCTCCTAT+GGG 0.509811 7:+37709407 MsG0780037985.01.T01:CDS
GAATCCAAGAAGGGTATCTT+CGG 0.510787 7:-37709128 None:intergenic
CCATCTGCAGCAGAGGCCAA+TGG 0.514076 7:+37709229 MsG0780037985.01.T01:CDS
CGAGAAATACTATCTGCAAC+CGG 0.516860 7:+37710150 MsG0780037985.01.T01:CDS
ACAATGGTCTTCATTTATGC+AGG 0.517675 7:+37709682 MsG0780037985.01.T01:CDS
GTGCAGAGGATTCCTGGTAG+GGG 0.518621 7:+37710304 MsG0780037985.01.T01:CDS
AAAATCATATGCTGAGGAAA+CGG 0.519993 7:-37710046 None:intergenic
CAGCATCAACAACAATCAGT+TGG 0.520795 7:+37708933 MsG0780037985.01.T01:CDS
AGCATCAACAACAATCAGTT+GGG 0.523329 7:+37708934 MsG0780037985.01.T01:CDS
CCAAGCATTGCTTGAAGCTG+TGG 0.524919 7:+37709610 MsG0780037985.01.T01:CDS
CTTCGCCGCCACCGCTTCCA+GGG 0.526440 7:-37709274 None:intergenic
TCATCCCTCTACTACCAAAA+GGG 0.532544 7:-37708845 None:intergenic
TGTCTTGTGTTGGCAAAGGA+AGG 0.534777 7:+37710357 MsG0780037985.01.T01:CDS
ATGGGGAACCCTGGAAGCGG+TGG 0.534973 7:+37709266 MsG0780037985.01.T01:CDS
CGATCATCTGAAGTACATCC+GGG 0.536848 7:-37710129 None:intergenic
GACAGTGTTGAGGATGAAGT+AGG 0.538311 7:-37708417 None:intergenic
CTCTTGACCCGAATCCAAGA+AGG 0.539089 7:-37709138 None:intergenic
CAAGCAAACCGGAATAAGAC+TGG 0.539954 7:-37710075 None:intergenic
CGGTGGCGGCGAAGATGTGT+CGG 0.546303 7:+37709283 MsG0780037985.01.T01:CDS
GATATTGAAGATGCATCTAT+GGG 0.546979 7:+37708627 MsG0780037985.01.T01:CDS
TAGTAACTTCACAGAGTCGC+AGG 0.548006 7:+37710270 MsG0780037985.01.T01:CDS
ATTGTTATCCTTTGCGCCGG+TGG 0.548468 7:-37708484 None:intergenic
AAGCACCAATCTTGAGCAAG+AGG 0.549041 7:-37709532 None:intergenic
CTTTGAAAAGGCTTCCCCAT+AGG 0.549307 7:-37709422 None:intergenic
CAAGTTTCACTTTCTCATGG+TGG 0.549648 7:+37708900 MsG0780037985.01.T01:CDS
GCCTCCGGCGCTACCGTGTG+AGG 0.550488 7:-37708442 None:intergenic
GCACTAAAGGCAGGTACGAT+GGG 0.551600 7:-37709952 None:intergenic
TTCCTCACCATCTGCAGCAG+AGG 0.553713 7:+37709222 MsG0780037985.01.T01:CDS
AAGCAGAAAATGGGGAACCC+TGG 0.559202 7:+37709257 MsG0780037985.01.T01:CDS
TGTTGAGGATGAAGTAGGAG+TGG 0.560505 7:-37708412 None:intergenic
TCCTGGTAGGGGATTTCATG+TGG 0.561432 7:+37710315 MsG0780037985.01.T01:CDS
GTCAAGAGATGTTTCTTAGG+AGG 0.562943 7:+37709153 MsG0780037985.01.T01:CDS
AGGCAGAGTGTTTGGTGCAG+AGG 0.564913 7:+37710290 MsG0780037985.01.T01:CDS
GAATGATCTTGATCTTGACT+TGG 0.565052 7:-37708582 None:intergenic
GGCCTCTGCTGCAGATGGTG+AGG 0.565284 7:-37709224 None:intergenic
TCCTCACACGGTAGCGCCGG+AGG 0.569283 7:+37708441 MsG0780037985.01.T01:CDS
TCTTCCTCACACGGTAGCGC+CGG 0.570460 7:+37708438 MsG0780037985.01.T01:CDS
GAGAATCTGAAGCAATATGC+TGG 0.570600 7:+37709800 MsG0780037985.01.T01:CDS
TCCACATGAAATCCCCTACC+AGG 0.574086 7:-37710316 None:intergenic
TTAACAAATCGAAGCACTAA+AGG 0.575268 7:-37709965 None:intergenic
GGTAATCCGGAACACGCGCA+AGG 0.576781 7:+37709368 MsG0780037985.01.T01:CDS
GGTATTGTTATCCTTTGCGC+CGG 0.583054 7:-37708487 None:intergenic
GCATTGCTTGAAGCTGTGGA+AGG 0.584725 7:+37709614 MsG0780037985.01.T01:CDS
AGCACTAAAGGCAGGTACGA+TGG 0.584829 7:-37709953 None:intergenic
CGATAGCACCACCGGCGCAA+AGG 0.585841 7:+37708476 MsG0780037985.01.T01:CDS
GTCGGCGCATCAGTTTCAGC+AGG 0.589273 7:+37709301 MsG0780037985.01.T01:CDS
TGCAGCTGAGAATATGTGAA+AGG 0.595086 7:-37709038 None:intergenic
TCAATTTCATCGTGGTGTGA+GGG 0.596797 7:-37709761 None:intergenic
GCAAAGGAAGGATCTCATCT+CGG 0.596929 7:+37710369 MsG0780037985.01.T01:CDS
AAAACCTACTCTTGTCGTCA+GGG 0.598538 7:+37710230 MsG0780037985.01.T01:CDS
GCTTCTACCGATAGCACCAC+CGG 0.599672 7:+37708468 MsG0780037985.01.T01:CDS
GGATAGGAGTTGTGATCGAA+CGG 0.600755 7:+37710018 MsG0780037985.01.T01:CDS
ATGTATTCTTCAAAAGGTAA+GGG 0.601264 7:-37708219 None:intergenic
CAAATCGAAGCACTAAAGGC+AGG 0.602527 7:-37709961 None:intergenic
TTATGCAGGAGTTAGCACTA+AGG 0.606201 7:+37709696 MsG0780037985.01.T01:CDS
TGAAGGTAAAAGATGTGGAA+TGG 0.609884 7:+37708530 MsG0780037985.01.T01:CDS
AAAATGGGGAACCCTGGAAG+CGG 0.610138 7:+37709263 MsG0780037985.01.T01:CDS
CAAGCTGAAGGTAAAAGATG+TGG 0.613564 7:+37708525 MsG0780037985.01.T01:CDS
AAATTGTCGTAACATTGGAT+AGG 0.615531 7:+37710002 MsG0780037985.01.T01:CDS
AGAACCCTGACGACAAGAGT+AGG 0.620221 7:-37710234 None:intergenic
AGGTAAAAGATGTGGAATGG+AGG 0.623374 7:+37708533 MsG0780037985.01.T01:CDS
CAGGAGTTAGCACTAAGGAA+TGG 0.623926 7:+37709701 MsG0780037985.01.T01:CDS
TCTTGACCCGAATCCAAGAA+GGG 0.632079 7:-37709137 None:intergenic
ATCACCAAATTTCTCCTATG+GGG 0.632427 7:+37709408 MsG0780037985.01.T01:CDS
TCAACACTGTCTTCCTCACA+CGG 0.633334 7:+37708429 MsG0780037985.01.T01:CDS
ACGCGCAAGGGATATTGGCG+CGG 0.634995 7:+37709381 MsG0780037985.01.T01:CDS
TGGTTCATAACAAACTGATG+AGG 0.638887 7:-37708975 None:intergenic
AGAAACATACCACAAGCTGA+AGG 0.641675 7:+37708513 MsG0780037985.01.T01:CDS
GTAATCCGGAACACGCGCAA+GGG 0.641709 7:+37709369 MsG0780037985.01.T01:CDS
ACTGCTTCGCAATCGCGTAG+TGG 0.643756 7:-37709893 None:intergenic
AATGCAGTGATCTTGAGTGC+AGG 0.644744 7:-37709731 None:intergenic
GAGGGAAAATTGTTGCTATG+CGG 0.647727 7:+37708335 MsG0780037985.01.T01:CDS
GTGAAGTTACTAAACGTCAA+CGG 0.647933 7:-37710259 None:intergenic
GAGTTAGCACTAAGGAATGG+TGG 0.649571 7:+37709704 MsG0780037985.01.T01:CDS
TGGCGCATAAGCAGAAAATG+GGG 0.679052 7:+37709249 MsG0780037985.01.T01:CDS
GCTGCAGAACTTATAGACGC+CGG 0.689078 7:+37709347 MsG0780037985.01.T01:CDS
TGTTTGTGTCAATGTCCACC+CGG 0.690393 7:+37710111 MsG0780037985.01.T01:CDS
CCAGCTAAAAGACTCAATTG+TGG 0.702219 7:+37709089 MsG0780037985.01.T01:CDS
TCATCTGAAGTACATCCGGG+TGG 0.714970 7:-37710126 None:intergenic
AACTGAGCTCAATTTCATCG+TGG 0.737179 7:-37709769 None:intergenic
GTGTGAGGAAGACAGTGTTG+AGG 0.783398 7:-37708427 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCCATATTGAAATTGATAA+TGG + Chr7:37708602-37708621 MsG0780037985.01.T01:CDS 20.0%
!! TTCCATTATCAATTTCAATA+TGG - Chr7:37708607-37708626 None:intergenic 20.0%
!!! ATAGATTTTGATATTGGTTT+TGG + Chr7:37709656-37709675 MsG0780037985.01.T01:CDS 20.0%
!!! ATTCAATGGTTTTAGTTTTA+TGG + Chr7:37708707-37708726 MsG0780037985.01.T01:CDS 20.0%
!!! CACATAATAGATTTTGATAT+TGG + Chr7:37709650-37709669 MsG0780037985.01.T01:CDS 20.0%
! AAGTTACCATTTGAAGAAAT+AGG - Chr7:37708756-37708775 None:intergenic 25.0%
! AGTTACCATTTGAAGAAATA+GGG - Chr7:37708755-37708774 None:intergenic 25.0%
! ATGTATTCTTCAAAAGGTAA+GGG - Chr7:37708222-37708241 None:intergenic 25.0%
! TAATTTGAGAAAGAGCAAAT+AGG - Chr7:37709932-37709951 None:intergenic 25.0%
! TATGTATTCTTCAAAAGGTA+AGG - Chr7:37708223-37708242 None:intergenic 25.0%
! TCAAAAACAACAACAGAATT+GGG - Chr7:37708369-37708388 None:intergenic 25.0%
! TTTCCTATGTATTCTTCAAA+AGG - Chr7:37708228-37708247 None:intergenic 25.0%
! TTTGAAGAATACATAGGAAA+AGG + Chr7:37708228-37708247 MsG0780037985.01.T01:CDS 25.0%
!! TATAATTGATCAGCTTTTCA+AGG + Chr7:37709325-37709344 MsG0780037985.01.T01:CDS 25.0%
!!! TTACCTTTTGAAGAATACAT+AGG + Chr7:37708222-37708241 MsG0780037985.01.T01:CDS 25.0%
!!! TTTGTTGATTTGGTTTTTTG+AGG - Chr7:37708392-37708411 None:intergenic 25.0%
AAAATCATATGCTGAGGAAA+CGG - Chr7:37710049-37710068 None:intergenic 30.0%
AAATTGTCGTAACATTGGAT+AGG + Chr7:37710002-37710021 MsG0780037985.01.T01:CDS 30.0%
AATCACCAAATTTCTCCTAT+GGG + Chr7:37709407-37709426 MsG0780037985.01.T01:CDS 30.0%
ACTTGTGAAGAACTGAAATT+AGG - Chr7:37708885-37708904 None:intergenic 30.0%
AGATATTGAAGATGCATCTA+TGG + Chr7:37708626-37708645 MsG0780037985.01.T01:CDS 30.0%
CAACAAGATGTTGAATTCAA+TGG + Chr7:37708693-37708712 MsG0780037985.01.T01:CDS 30.0%
CTTGTGAAGAACTGAAATTA+GGG - Chr7:37708884-37708903 None:intergenic 30.0%
GATATTGAAGATGCATCTAT+GGG + Chr7:37708627-37708646 MsG0780037985.01.T01:CDS 30.0%
GTCAAAAACAACAACAGAAT+TGG - Chr7:37708370-37708389 None:intergenic 30.0%
TGAAAGGAAAAACCAAACTA+GGG - Chr7:37709025-37709044 None:intergenic 30.0%
! ATTTGTTCTGATTTCCCTTT+TGG + Chr7:37708831-37708850 MsG0780037985.01.T01:CDS 30.0%
! TCCAATGTTACGACAATTTT+AGG - Chr7:37710001-37710020 None:intergenic 30.0%
! TTAACAAATCGAAGCACTAA+AGG - Chr7:37709968-37709987 None:intergenic 30.0%
! TTAAGCAAGCTTTTACAAGT+TGG + Chr7:37708651-37708670 MsG0780037985.01.T01:CDS 30.0%
!!! AAGGGCTGCTTTTTATTTTA+AGG + Chr7:37709442-37709461 MsG0780037985.01.T01:CDS 30.0%
!!! GATTTTGATATTGGTTTTGG+TGG + Chr7:37709659-37709678 MsG0780037985.01.T01:CDS 30.0%
AAAACAAGCTTCTCAATTGC+CGG - Chr7:37710172-37710191 None:intergenic 35.0%
AAATTTGCAAACTGCAGAAC+AGG - Chr7:37709581-37709600 None:intergenic 35.0%
ACAATGGTCTTCATTTATGC+AGG + Chr7:37709682-37709701 MsG0780037985.01.T01:CDS 35.0%
AGCATCAACAACAATCAGTT+GGG + Chr7:37708934-37708953 MsG0780037985.01.T01:CDS 35.0%
AGTCTCTGAATTCTGTTTCA+TGG + Chr7:37709864-37709883 MsG0780037985.01.T01:CDS 35.0%
AGTGCAAAAATCATATGCTG+AGG - Chr7:37710055-37710074 None:intergenic 35.0%
ATCAAGTGATTCAAGCAAAC+CGG - Chr7:37710089-37710108 None:intergenic 35.0%
ATCACCAAATTTCTCCTATG+GGG + Chr7:37709408-37709427 MsG0780037985.01.T01:CDS 35.0%
CAATCACCAAATTTCTCCTA+TGG + Chr7:37709406-37709425 MsG0780037985.01.T01:CDS 35.0%
GAATGATCTTGATCTTGACT+TGG - Chr7:37708585-37708604 None:intergenic 35.0%
GCCTAAAATTGTCGTAACAT+TGG + Chr7:37709997-37710016 MsG0780037985.01.T01:CDS 35.0%
GTGAAAGGAAAAACCAAACT+AGG - Chr7:37709026-37709045 None:intergenic 35.0%
GTGAAGTTACTAAACGTCAA+CGG - Chr7:37710262-37710281 None:intergenic 35.0%
TCACAAGTTTCACTTTCTCA+TGG + Chr7:37708897-37708916 MsG0780037985.01.T01:CDS 35.0%
TGAAGGTAAAAGATGTGGAA+TGG + Chr7:37708530-37708549 MsG0780037985.01.T01:CDS 35.0%
TGGTTCATAACAAACTGATG+AGG - Chr7:37708978-37708997 None:intergenic 35.0%
! AAGAACAGTTTTTGCAAAGG+TGG + Chr7:37708313-37708332 MsG0780037985.01.T01:CDS 35.0%
! AGCAAGAACAGTTTTTGCAA+AGG + Chr7:37708310-37708329 MsG0780037985.01.T01:CDS 35.0%
! CTTGACCCTATTTCTTCAAA+TGG + Chr7:37708747-37708766 MsG0780037985.01.T01:CDS 35.0%
! TAAAAAGCAGCCCTTTGAAA+AGG - Chr7:37709437-37709456 None:intergenic 35.0%
!! ATTTCCCTTTTGGTAGTAGA+GGG + Chr7:37708841-37708860 MsG0780037985.01.T01:CDS 35.0%
!! GCAATTGAGAAGCTTGTTTT+GGG + Chr7:37710172-37710191 MsG0780037985.01.T01:CDS 35.0%
!! GGAAAAGGTGTGTTAGATTT+TGG + Chr7:37708243-37708262 MsG0780037985.01.T01:CDS 35.0%
!!! ATATTGGTTTTGGTGGACAA+TGG + Chr7:37709666-37709685 MsG0780037985.01.T01:CDS 35.0%
!!! GGCTGCTTTTTATTTTAAGG+AGG + Chr7:37709445-37709464 MsG0780037985.01.T01:CDS 35.0%
AAAAACCTACTCTTGTCGTC+AGG + Chr7:37710229-37710248 MsG0780037985.01.T01:CDS 40.0%
AAAACCTACTCTTGTCGTCA+GGG + Chr7:37710230-37710249 MsG0780037985.01.T01:CDS 40.0%
AAAGATGTGGAATGGAGGAT+TGG + Chr7:37708538-37708557 MsG0780037985.01.T01:CDS 40.0%
AACTGAGCTCAATTTCATCG+TGG - Chr7:37709772-37709791 None:intergenic 40.0%
AAGATACCCTTCTTGGATTC+GGG + Chr7:37709131-37709150 MsG0780037985.01.T01:CDS 40.0%
AAGATGTGGAATGGAGGATT+GGG + Chr7:37708539-37708558 MsG0780037985.01.T01:CDS 40.0%
AATGGCGCATAAGCAGAAAA+TGG + Chr7:37709247-37709266 MsG0780037985.01.T01:CDS 40.0%
AATTCCGAAGATACCCTTCT+TGG + Chr7:37709124-37709143 MsG0780037985.01.T01:CDS 40.0%
AGAAACATACCACAAGCTGA+AGG + Chr7:37708513-37708532 MsG0780037985.01.T01:CDS 40.0%
AGAATTCGCTTGTCTTGTGT+TGG + Chr7:37710347-37710366 MsG0780037985.01.T01:CDS 40.0%
AGGGAAAATTGTTGCTATGC+GGG + Chr7:37708336-37708355 MsG0780037985.01.T01:CDS 40.0%
AGGTAAAAGATGTGGAATGG+AGG + Chr7:37708533-37708552 MsG0780037985.01.T01:CDS 40.0%
ATCTCATCTCGGTTTCAACT+TGG + Chr7:37710380-37710399 MsG0780037985.01.T01:CDS 40.0%
ATGGCGCATAAGCAGAAAAT+GGG + Chr7:37709248-37709267 MsG0780037985.01.T01:CDS 40.0%
CAAGCTGAAGGTAAAAGATG+TGG + Chr7:37708525-37708544 MsG0780037985.01.T01:CDS 40.0%
CAAGTTTCACTTTCTCATGG+TGG + Chr7:37708900-37708919 MsG0780037985.01.T01:CDS 40.0%
CAGCATCAACAACAATCAGT+TGG + Chr7:37708933-37708952 MsG0780037985.01.T01:CDS 40.0%
CCAGCTAAAAGACTCAATTG+TGG + Chr7:37709089-37709108 MsG0780037985.01.T01:CDS 40.0%
CGAGAAATACTATCTGCAAC+CGG + Chr7:37710150-37710169 MsG0780037985.01.T01:CDS 40.0%
GAAGATACCCTTCTTGGATT+CGG + Chr7:37709130-37709149 MsG0780037985.01.T01:CDS 40.0%
GAGGGAAAATTGTTGCTATG+CGG + Chr7:37708335-37708354 MsG0780037985.01.T01:CDS 40.0%
GGAAAAACCAAACTAGGGTT+AGG - Chr7:37709020-37709039 None:intergenic 40.0%
GTCAAGAGATGTTTCTTAGG+AGG + Chr7:37709153-37709172 MsG0780037985.01.T01:CDS 40.0%
GTTTATGCCTAACCCTAGTT+TGG + Chr7:37709010-37709029 MsG0780037985.01.T01:CDS 40.0%
TCAATTTCATCGTGGTGTGA+GGG - Chr7:37709764-37709783 None:intergenic 40.0%
TCATCCCTCTACTACCAAAA+GGG - Chr7:37708848-37708867 None:intergenic 40.0%
TGCAGCTGAGAATATGTGAA+AGG - Chr7:37709041-37709060 None:intergenic 40.0%
TTATGCAGGAGTTAGCACTA+AGG + Chr7:37709696-37709715 MsG0780037985.01.T01:CDS 40.0%
TTCATCCCTCTACTACCAAA+AGG - Chr7:37708849-37708868 None:intergenic 40.0%
! AACAGTTTTTGCAAAGGTGG+AGG + Chr7:37708316-37708335 MsG0780037985.01.T01:CDS 40.0%
! ACAGTTTTTGCAAAGGTGGA+GGG + Chr7:37708317-37708336 MsG0780037985.01.T01:CDS 40.0%
! AGCTTGTGGTATGTTTCTGT+TGG - Chr7:37708511-37708530 None:intergenic 40.0%
! ATTTTCTGCTTATGCGCCAT+TGG - Chr7:37709248-37709267 None:intergenic 40.0%
! CATCTTTTACCTTCAGCTTG+TGG - Chr7:37708525-37708544 None:intergenic 40.0%
! CCACAATTGAGTCTTTTAGC+TGG - Chr7:37709092-37709111 None:intergenic 40.0%
! GACAAGAGTAGGTTTTTCCA+AGG - Chr7:37710226-37710245 None:intergenic 40.0%
! GAGAATCTGAAGCAATATGC+TGG + Chr7:37709800-37709819 MsG0780037985.01.T01:CDS 40.0%
! GCATAAACTGAGCTTGGTTT+TGG - Chr7:37708998-37709017 None:intergenic 40.0%
! TATGGGGAAGCCTTTTCAAA+GGG + Chr7:37709424-37709443 MsG0780037985.01.T01:CDS 40.0%
! TCGATCATCTGAAGTACATC+CGG - Chr7:37710133-37710152 None:intergenic 40.0%
!! CAATTGAGTCTTTTAGCTGG+TGG - Chr7:37709089-37709108 None:intergenic 40.0%
!! GAATCCAAGAAGGGTATCTT+CGG - Chr7:37709131-37709150 None:intergenic 40.0%
!! GATTTCCCTTTTGGTAGTAG+AGG + Chr7:37708840-37708859 MsG0780037985.01.T01:CDS 40.0%
!! GGCAATTGAGAAGCTTGTTT+TGG + Chr7:37710171-37710190 MsG0780037985.01.T01:CDS 40.0%
!! GTAGGAGTGGTTTGTTGATT+TGG - Chr7:37708402-37708421 None:intergenic 40.0%
!! TTTGCACTCCAGTCTTATTC+CGG + Chr7:37710067-37710086 MsG0780037985.01.T01:CDS 40.0%
AAGCACCAATCTTGAGCAAG+AGG - Chr7:37709535-37709554 None:intergenic 45.0%
AATGCAGTGATCTTGAGTGC+AGG - Chr7:37709734-37709753 None:intergenic 45.0%
ACTTATAGACGCCGGTAATC+CGG + Chr7:37709355-37709374 MsG0780037985.01.T01:CDS 45.0%
AGCTTCAAGCAATGCTTGGT+TGG - Chr7:37709609-37709628 None:intergenic 45.0%
ATCTTGAGCAAGAGGCTAGT+TGG - Chr7:37709527-37709546 None:intergenic 45.0%
CAAGCAAACCGGAATAAGAC+TGG - Chr7:37710078-37710097 None:intergenic 45.0%
CAGGAGTTAGCACTAAGGAA+TGG + Chr7:37709701-37709720 MsG0780037985.01.T01:CDS 45.0%
CGGGTCAAGAGATGTTTCTT+AGG + Chr7:37709150-37709169 MsG0780037985.01.T01:CDS 45.0%
CTCAATTTCATCGTGGTGTG+AGG - Chr7:37709765-37709784 None:intergenic 45.0%
GAGTTAGCACTAAGGAATGG+TGG + Chr7:37709704-37709723 MsG0780037985.01.T01:CDS 45.0%
GCAAAGGAAGGATCTCATCT+CGG + Chr7:37710369-37710388 MsG0780037985.01.T01:CDS 45.0%
GCTTCCCCATAGGAGAAATT+TGG - Chr7:37709415-37709434 None:intergenic 45.0%
GGATAGGAGTTGTGATCGAA+CGG + Chr7:37710018-37710037 MsG0780037985.01.T01:CDS 45.0%
GGTATTGTTATCCTTTGCGC+CGG - Chr7:37708490-37708509 None:intergenic 45.0%
GGTTAGGCATAAACTGAGCT+TGG - Chr7:37709004-37709023 None:intergenic 45.0%
TAGTAACTTCACAGAGTCGC+AGG + Chr7:37710270-37710289 MsG0780037985.01.T01:CDS 45.0%
TCAACACTGTCTTCCTCACA+CGG + Chr7:37708429-37708448 MsG0780037985.01.T01:CDS 45.0%
TCTTGACCCGAATCCAAGAA+GGG - Chr7:37709140-37709159 None:intergenic 45.0%
TGGCGCATAAGCAGAAAATG+GGG + Chr7:37709249-37709268 MsG0780037985.01.T01:CDS 45.0%
TGTTGAGGATGAAGTAGGAG+TGG - Chr7:37708415-37708434 None:intergenic 45.0%
TGTTTGTGTCAATGTCCACC+CGG + Chr7:37710111-37710130 MsG0780037985.01.T01:CDS 45.0%
TTCTATCCTGCGAACCCAAA+CGG - Chr7:37710198-37710217 None:intergenic 45.0%
! ACTAGCCTCTTGCTCAAGAT+TGG + Chr7:37709527-37709546 MsG0780037985.01.T01:CDS 45.0%
! CAAATCGAAGCACTAAAGGC+AGG - Chr7:37709964-37709983 None:intergenic 45.0%
! CGATCATCTGAAGTACATCC+GGG - Chr7:37710132-37710151 None:intergenic 45.0%
! CTATGGGGAAGCCTTTTCAA+AGG + Chr7:37709423-37709442 MsG0780037985.01.T01:CDS 45.0%
! CTTTGAAAAGGCTTCCCCAT+AGG - Chr7:37709425-37709444 None:intergenic 45.0%
! GACAGTGTTGAGGATGAAGT+AGG - Chr7:37708420-37708439 None:intergenic 45.0%
! TGTCTTGTGTTGGCAAAGGA+AGG + Chr7:37710357-37710376 MsG0780037985.01.T01:CDS 45.0%
!!! AAGCTTGTTTTGGGCCGTTT+GGG + Chr7:37710181-37710200 MsG0780037985.01.T01:CDS 45.0%
AAAATGGGGAACCCTGGAAG+CGG + Chr7:37709263-37709282 MsG0780037985.01.T01:CDS 50.0%
AAGCAGAAAATGGGGAACCC+TGG + Chr7:37709257-37709276 MsG0780037985.01.T01:CDS 50.0%
AATATCCCTTGCGCGTGTTC+CGG - Chr7:37709377-37709396 None:intergenic 50.0%
AGAACCCTGACGACAAGAGT+AGG - Chr7:37710237-37710256 None:intergenic 50.0%
AGCACTAAAGGCAGGTACGA+TGG - Chr7:37709956-37709975 None:intergenic 50.0%
ATTGTTATCCTTTGCGCCGG+TGG - Chr7:37708487-37708506 None:intergenic 50.0%
CCACAGCTTCAAGCAATGCT+TGG - Chr7:37709613-37709632 None:intergenic 50.0%
CGCAGGATAGAACACTTCCT+TGG + Chr7:37710206-37710225 MsG0780037985.01.T01:CDS 50.0%
CTCTTGACCCGAATCCAAGA+AGG - Chr7:37709141-37709160 None:intergenic 50.0%
GCACTAAAGGCAGGTACGAT+GGG - Chr7:37709955-37709974 None:intergenic 50.0%
GCATTGCTTGAAGCTGTGGA+AGG + Chr7:37709614-37709633 MsG0780037985.01.T01:CDS 50.0%
GCTGCAGAACTTATAGACGC+CGG + Chr7:37709347-37709366 MsG0780037985.01.T01:CDS 50.0%
GTGGCTGAAGCTGAATCTCT+TGG - Chr7:37709070-37709089 None:intergenic 50.0%
GTGTGAGGAAGACAGTGTTG+AGG - Chr7:37708430-37708449 None:intergenic 50.0%
TCCACATGAAATCCCCTACC+AGG - Chr7:37710319-37710338 None:intergenic 50.0%
TCCTGGTAGGGGATTTCATG+TGG + Chr7:37710315-37710334 MsG0780037985.01.T01:CDS 50.0%
! CCAAGCATTGCTTGAAGCTG+TGG + Chr7:37709610-37709629 MsG0780037985.01.T01:CDS 50.0%
! CGCTTGTCTTGTGTTGGCAA+AGG + Chr7:37710353-37710372 MsG0780037985.01.T01:CDS 50.0%
! TCATCTGAAGTACATCCGGG+TGG - Chr7:37710129-37710148 None:intergenic 50.0%
!! TGTTTGGTGCAGAGGATTCC+TGG + Chr7:37710298-37710317 MsG0780037985.01.T01:CDS 50.0%
!!! GAAGCTTGTTTTGGGCCGTT+TGG + Chr7:37710180-37710199 MsG0780037985.01.T01:CDS 50.0%
ACGCGATTGCGAAGCAGTTG+TGG + Chr7:37709898-37709917 MsG0780037985.01.T01:CDS 55.0%
ACTGCTTCGCAATCGCGTAG+TGG - Chr7:37709896-37709915 None:intergenic 55.0%
GCTTCTACCGATAGCACCAC+CGG + Chr7:37708468-37708487 MsG0780037985.01.T01:CDS 55.0%
GGAACACGCGCAAGGGATAT+TGG + Chr7:37709376-37709395 MsG0780037985.01.T01:CDS 55.0%
GGTGCAGAGGATTCCTGGTA+GGG + Chr7:37710303-37710322 MsG0780037985.01.T01:CDS 55.0%
GTAATCCGGAACACGCGCAA+GGG + Chr7:37709369-37709388 MsG0780037985.01.T01:CDS 55.0%
GTGCAGAGGATTCCTGGTAG+GGG + Chr7:37710304-37710323 MsG0780037985.01.T01:CDS 55.0%
TGGTGCAGAGGATTCCTGGT+AGG + Chr7:37710302-37710321 MsG0780037985.01.T01:CDS 55.0%
TTCCTCACCATCTGCAGCAG+AGG + Chr7:37709222-37709241 MsG0780037985.01.T01:CDS 55.0%
TTGCGCGTGTTCCGGATTAC+CGG - Chr7:37709369-37709388 None:intergenic 55.0%
! AGAGTCGCAGGCAGAGTGTT+TGG + Chr7:37710282-37710301 MsG0780037985.01.T01:CDS 55.0%
!! AGGCAGAGTGTTTGGTGCAG+AGG + Chr7:37710290-37710309 MsG0780037985.01.T01:CDS 55.0%
ACGCGCAAGGGATATTGGCG+CGG + Chr7:37709381-37709400 MsG0780037985.01.T01:CDS 60.0%
CCATCTGCAGCAGAGGCCAA+TGG + Chr7:37709229-37709248 MsG0780037985.01.T01:CDS 60.0%
GGTAATCCGGAACACGCGCA+AGG + Chr7:37709368-37709387 MsG0780037985.01.T01:CDS 60.0%
GTCGGCGCATCAGTTTCAGC+AGG + Chr7:37709301-37709320 MsG0780037985.01.T01:CDS 60.0%
TCGCAATCGCGTAGTGGCTG+CGG - Chr7:37709890-37709909 None:intergenic 60.0%
TCTTCCTCACACGGTAGCGC+CGG + Chr7:37708438-37708457 MsG0780037985.01.T01:CDS 60.0%
! CCATTGGCCTCTGCTGCAGA+TGG - Chr7:37709232-37709251 None:intergenic 60.0%
! TTTGGGCCGTTTGGGTTCGC+AGG + Chr7:37710189-37710208 MsG0780037985.01.T01:CDS 60.0%
!! CTTTGCGCCGGTGGTGCTAT+CGG - Chr7:37708478-37708497 None:intergenic 60.0%
ATGGGGAACCCTGGAAGCGG+TGG + Chr7:37709266-37709285 MsG0780037985.01.T01:CDS 65.0%
CGATAGCACCACCGGCGCAA+AGG + Chr7:37708476-37708495 MsG0780037985.01.T01:CDS 65.0%
GGCCTCTGCTGCAGATGGTG+AGG - Chr7:37709227-37709246 None:intergenic 65.0%
! CGGTGGCGGCGAAGATGTGT+CGG + Chr7:37709283-37709302 MsG0780037985.01.T01:CDS 65.0%
!! ATCGGTAGAAGCGCCGCCTC+CGG - Chr7:37708460-37708479 None:intergenic 65.0%
CTTCGCCGCCACCGCTTCCA+GGG - Chr7:37709277-37709296 None:intergenic 70.0%
GGGAACCCTGGAAGCGGTGG+CGG + Chr7:37709269-37709288 MsG0780037985.01.T01:CDS 70.0%
TCTTCGCCGCCACCGCTTCC+AGG - Chr7:37709278-37709297 None:intergenic 70.0%
! TCACACGGTAGCGCCGGAGG+CGG + Chr7:37708444-37708463 MsG0780037985.01.T01:CDS 70.0%
! TCCTCACACGGTAGCGCCGG+AGG + Chr7:37708441-37708460 MsG0780037985.01.T01:CDS 70.0%
GCCTCCGGCGCTACCGTGTG+AGG - Chr7:37708445-37708464 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 37708216 37710411 37708216 ID=MsG0780037985.01;Name=MsG0780037985.01
Chr7 mRNA 37708216 37710411 37708216 ID=MsG0780037985.01.T01;Parent=MsG0780037985.01;Name=MsG0780037985.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|731
Chr7 exon 37708216 37710411 37708216 ID=MsG0780037985.01.T01:exon:5651;Parent=MsG0780037985.01.T01
Chr7 CDS 37708216 37710411 37708216 ID=MsG0780037985.01.T01:cds;Parent=MsG0780037985.01.T01
Gene Sequence

>MsG0780037985.01.T01

ATGCCCTTACCTTTTGAAGAATACATAGGAAAAGGTGTGTTAGATTTTGGTTCAAGTGTTGTTGCTTCTTCAGATTCATATTTGTTTTCACAACAGCAAGAACAGTTTTTGCAAAGGTGGAGGGAAAATTGTTGCTATGCGGGCATTGAGCCCAATTCTGTTGTTGTTTTTGACCTCAAAAAACCAAATCAACAAACCACTCCTACTTCATCCTCAACACTGTCTTCCTCACACGGTAGCGCCGGAGGCGGCGCTTCTACCGATAGCACCACCGGCGCAAAGGATAACAATACCAACAGAAACATACCACAAGCTGAAGGTAAAAGATGTGGAATGGAGGATTGGGAGAGTGTGTTATCTGAATCACCAAGTCAAGATCAAGATCATTCCATATTGAAATTGATAATGGAAGATATTGAAGATGCATCTATGGGATTAAGCAAGCTTTTACAAGTTGGAACTAGTAATTCTCATTCTCAACAAGATGTTGAATTCAATGGTTTTAGTTTTATGGATCAACAAAGTTCTGTACTTGACCCTATTTCTTCAAATGGTAACTTTGTAACTAGCATTGATTCTTCTTCTGTTGTTGCTACTACTGCTACTGCTGCTGAGATTTGTTCTGATTTCCCTTTTGGTAGTAGAGGGATGAATCAAATTCAAAACCCTAATTTCAGTTCTTCACAAGTTTCACTTTCTCATGGTGGTTTGTTTCATCAGCATCAACAACAATCAGTTGGGTCTCTTGATGAGAAGCTACCTCATCAGTTTGTTATGAACCAAAACCAAGCTCAGTTTATGCCTAACCCTAGTTTGGTTTTTCCTTTCACATATTCTCAGCTGCAAGAAAACCAAGAGATTCAGCTTCAGCCACCAGCTAAAAGACTCAATTGTGGAACAAATTATGAAATTCCGAAGATACCCTTCTTGGATTCGGGTCAAGAGATGTTTCTTAGGAGGCAACAACAGCATCAGCAGCAGCAACATCAGCAGCAGCTTCAATTGCTTCCTCACCATCTGCAGCAGAGGCCAATGGCGCATAAGCAGAAAATGGGGAACCCTGGAAGCGGTGGCGGCGAAGATGTGTCGGCGCATCAGTTTCAGCAGGCTATAATTGATCAGCTTTTCAAGGCTGCAGAACTTATAGACGCCGGTAATCCGGAACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAAATTTCTCCTATGGGGAAGCCTTTTCAAAGGGCTGCTTTTTATTTTAAGGAGGCATTGCAATTGCTTCTTCAATCAAATGTTAACAACAGCAACAACAACAGCTTTTCACCAACTAGCCTCTTGCTCAAGATTGGTGCTTATAAATCATTCTCAGAAATCTCACCTGTTCTGCAGTTTGCAAATTTCACTTCCAACCAAGCATTGCTTGAAGCTGTGGAAGGTTTCGATCGAATTCACATAATAGATTTTGATATTGGTTTTGGTGGACAATGGTCTTCATTTATGCAGGAGTTAGCACTAAGGAATGGTGGTGCACCTGCACTCAAGATCACTGCATTTGTTTCGCCCTCACACCACGATGAAATTGAGCTCAGTTTCACTAACGAGAATCTGAAGCAATATGCTGGTGAAATTAACATGTCATTTGAGCTCGAGATTCTGACACTTGAGTCTCTGAATTCTGTTTCATGGCCGCAGCCACTACGCGATTGCGAAGCAGTTGTGGTTAACTTGCCTATTTGCTCTTTCTCAAATTACCCATCGTACCTGCCTTTAGTGCTTCGATTTGTTAAGCAGCTCATGCCTAAAATTGTCGTAACATTGGATAGGAGTTGTGATCGAACGGATGCACCGTTTCCTCAGCATATGATTTTTGCACTCCAGTCTTATTCCGGTTTGCTTGAATCACTTGATGCTGTTTGTGTCAATGTCCACCCGGATGTACTTCAGATGATCGAGAAATACTATCTGCAACCGGCAATTGAGAAGCTTGTTTTGGGCCGTTTGGGTTCGCAGGATAGAACACTTCCTTGGAAAAACCTACTCTTGTCGTCAGGGTTCTCTCCGTTGACGTTTAGTAACTTCACAGAGTCGCAGGCAGAGTGTTTGGTGCAGAGGATTCCTGGTAGGGGATTTCATGTGGAGAAGAAGCAGAATTCGCTTGTCTTGTGTTGGCAAAGGAAGGATCTCATCTCGGTTTCAACTTGGAGATGCTGA
Protein sequence

>MsG0780037985.01.T01

MPLPFEEYIGKGVLDFGSSVVASSDSYLFSQQQEQFLQRWRENCCYAGIEPNSVVVFDLKKPNQQTTPTSSSTLSSSHGSAGGGASTDSTTGAKDNNTNRNIPQAEGKRCGMEDWESVLSESPSQDQDHSILKLIMEDIEDASMGLSKLLQVGTSNSHSQQDVEFNGFSFMDQQSSVLDPISSNGNFVTSIDSSSVVATTATAAEICSDFPFGSRGMNQIQNPNFSSSQVSLSHGGLFHQHQQQSVGSLDEKLPHQFVMNQNQAQFMPNPSLVFPFTYSQLQENQEIQLQPPAKRLNCGTNYEIPKIPFLDSGQEMFLRRQQQHQQQQHQQQLQLLPHHLQQRPMAHKQKMGNPGSGGGEDVSAHQFQQAIIDQLFKAAELIDAGNPEHAQGILARLNHQISPMGKPFQRAAFYFKEALQLLLQSNVNNSNNNSFSPTSLLLKIGAYKSFSEISPVLQFANFTSNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPALKITAFVSPSHHDEIELSFTNENLKQYAGEINMSFELEILTLESLNSVSWPQPLRDCEAVVVNLPICSFSNYPSYLPLVLRFVKQLMPKIVVTLDRSCDRTDAPFPQHMIFALQSYSGLLESLDAVCVNVHPDVLQMIEKYYLQPAIEKLVLGRLGSQDRTLPWKNLLLSSGFSPLTFSNFTESQAECLVQRIPGRGFHVEKKQNSLVLCWQRKDLISVSTWRC*