Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037984.01.T01 | XP_039683591.1 | 95.777 | 734 | 19 | 3 | 1 | 730 | 7 | 732 | 0 | 1438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037984.01.T01 | O81316 | 56.959 | 388 | 139 | 10 | 346 | 730 | 193 | 555 | 7.48E-138 | 420 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037984.01.T01 | A0A396GWJ9 | 95.777 | 734 | 19 | 3 | 1 | 730 | 7 | 732 | 0.0 | 1438 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0780037984.01.T01 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004106.01 | MsG0780037984.01 | 0.850389 | 1.752563e-60 | 3.427491e-57 |
| MsG0180005568.01 | MsG0780037984.01 | 0.820219 | 7.699688e-53 | 6.055417e-50 |
| MsG0280010645.01 | MsG0780037984.01 | 0.804688 | 1.916029e-49 | 9.943124e-47 |
| MsG0280011470.01 | MsG0780037984.01 | 0.801534 | 8.607143e-49 | 4.120395e-46 |
| MsG0380014794.01 | MsG0780037984.01 | 0.804304 | 2.303596e-49 | 1.183655e-46 |
| MsG0680034028.01 | MsG0780037984.01 | 0.811078 | 8.379349e-51 | 5.137955e-48 |
| MsG0480020229.01 | MsG0780037984.01 | 0.805483 | 1.306211e-49 | 6.918502e-47 |
| MsG0580025625.01 | MsG0780037984.01 | 0.804218 | 2.401120e-49 | 1.230993e-46 |
| MsG0380015921.01 | MsG0780037984.01 | 0.819939 | 8.926041e-53 | 6.965794e-50 |
| MsG0580026144.01 | MsG0780037984.01 | 0.800966 | 1.124492e-48 | 5.306840e-46 |
| MsG0580028719.01 | MsG0780037984.01 | 0.805014 | 1.637777e-49 | 8.570761e-47 |
| MsG0680030680.01 | MsG0780037984.01 | 0.809633 | 1.718639e-50 | 1.014380e-47 |
| MsG0280008103.01 | MsG0780037984.01 | 0.800294 | 1.541722e-48 | 7.152760e-46 |
| MsG0780037984.01 | MsG0780037985.01 | 0.883228 | 5.357543e-71 | 3.367703e-67 |
| MsG0780037984.01 | MsG0780039256.01 | 0.804562 | 2.035733e-49 | 1.052961e-46 |
| MsG0780037984.01 | MsG0780040417.01 | 0.804775 | 1.836953e-49 | 9.554458e-47 |
| MsG0780037984.01 | MsG0780041256.01 | 0.819883 | 9.189203e-53 | 7.159878e-50 |
| MsG0780037984.01 | MsG0880045617.01 | 0.818336 | 2.067048e-52 | 1.542986e-49 |
| MsG0780037984.01 | MsG0880046025.01 | 0.811146 | 8.099185e-51 | 4.974984e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0780037984.01 | MsG0780037985.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037984.01.T01 | MTR_0092s0100 | 95.640 | 734 | 20 | 3 | 1 | 730 | 7 | 732 | 0.0 | 1432 |
| MsG0780037984.01.T01 | MTR_0092s0100 | 95.640 | 734 | 20 | 3 | 1 | 730 | 4 | 729 | 0.0 | 1430 |
| MsG0780037984.01.T01 | MTR_4g026485 | 53.346 | 538 | 194 | 11 | 205 | 730 | 133 | 625 | 7.09e-176 | 517 |
| MsG0780037984.01.T01 | MTR_0092s0060 | 97.253 | 182 | 4 | 1 | 1 | 181 | 4 | 185 | 9.24e-122 | 362 |
| MsG0780037984.01.T01 | MTR_8g077940 | 35.946 | 370 | 220 | 11 | 371 | 730 | 180 | 542 | 4.47e-59 | 209 |
| MsG0780037984.01.T01 | MTR_7g027190 | 26.484 | 438 | 270 | 11 | 318 | 730 | 264 | 674 | 1.20e-35 | 144 |
| MsG0780037984.01.T01 | MTR_3g065980 | 27.895 | 380 | 246 | 7 | 370 | 729 | 169 | 540 | 1.79e-35 | 142 |
| MsG0780037984.01.T01 | MTR_3g056110 | 27.056 | 377 | 248 | 9 | 372 | 729 | 174 | 542 | 2.81e-32 | 132 |
| MsG0780037984.01.T01 | MTR_4g076020 | 28.533 | 368 | 224 | 13 | 376 | 729 | 87 | 429 | 4.02e-30 | 124 |
| MsG0780037984.01.T01 | MTR_4g077760 | 28.818 | 406 | 265 | 12 | 339 | 729 | 159 | 555 | 5.11e-29 | 122 |
| MsG0780037984.01.T01 | MTR_5g058860 | 29.442 | 394 | 234 | 16 | 370 | 730 | 116 | 498 | 1.15e-28 | 121 |
| MsG0780037984.01.T01 | MTR_5g094450 | 25.469 | 373 | 259 | 7 | 374 | 729 | 162 | 532 | 1.46e-28 | 121 |
| MsG0780037984.01.T01 | MTR_3g089055 | 26.954 | 371 | 252 | 8 | 374 | 729 | 199 | 565 | 1.65e-27 | 118 |
| MsG0780037984.01.T01 | MTR_3g089055 | 26.954 | 371 | 252 | 8 | 374 | 729 | 204 | 570 | 1.72e-27 | 118 |
| MsG0780037984.01.T01 | MTR_3g072710 | 26.933 | 401 | 237 | 16 | 370 | 730 | 117 | 501 | 1.38e-26 | 114 |
| MsG0780037984.01.T01 | MTR_2g082090 | 26.031 | 388 | 263 | 9 | 359 | 728 | 197 | 578 | 1.70e-26 | 115 |
| MsG0780037984.01.T01 | MTR_7g074650 | 27.322 | 366 | 240 | 9 | 376 | 729 | 441 | 792 | 1.72e-26 | 116 |
| MsG0780037984.01.T01 | MTR_5g097480 | 23.099 | 355 | 256 | 7 | 389 | 729 | 193 | 544 | 2.85e-25 | 111 |
| MsG0780037984.01.T01 | MTR_1g029420 | 26.596 | 376 | 247 | 12 | 374 | 729 | 226 | 592 | 3.55e-25 | 111 |
| MsG0780037984.01.T01 | MTR_8g093070 | 26.273 | 373 | 254 | 9 | 367 | 728 | 133 | 495 | 1.13e-24 | 108 |
| MsG0780037984.01.T01 | MTR_2g026250 | 24.543 | 383 | 253 | 11 | 372 | 730 | 227 | 597 | 6.02e-24 | 107 |
| MsG0780037984.01.T01 | MTR_4g102790 | 23.545 | 378 | 265 | 7 | 370 | 728 | 289 | 661 | 2.00e-23 | 106 |
| MsG0780037984.01.T01 | MTR_1g069725 | 28.533 | 375 | 238 | 16 | 370 | 730 | 106 | 464 | 2.93e-23 | 104 |
| MsG0780037984.01.T01 | MTR_4g104020 | 25.258 | 388 | 251 | 12 | 370 | 730 | 146 | 521 | 5.20e-23 | 103 |
| MsG0780037984.01.T01 | MTR_4g133660 | 24.147 | 381 | 253 | 10 | 374 | 730 | 176 | 544 | 8.36e-23 | 103 |
| MsG0780037984.01.T01 | MTR_5g019750 | 30.736 | 231 | 147 | 6 | 507 | 730 | 71 | 295 | 2.14e-22 | 98.6 |
| MsG0780037984.01.T01 | MTR_8g442410 | 22.798 | 386 | 260 | 10 | 370 | 729 | 152 | 525 | 4.67e-19 | 91.7 |
| MsG0780037984.01.T01 | MTR_4g097080 | 22.251 | 391 | 273 | 12 | 360 | 729 | 123 | 503 | 1.02e-18 | 90.5 |
| MsG0780037984.01.T01 | MTR_2g097473 | 23.181 | 371 | 262 | 9 | 374 | 728 | 290 | 653 | 1.34e-18 | 90.9 |
| MsG0780037984.01.T01 | MTR_2g034280 | 23.711 | 388 | 271 | 10 | 359 | 729 | 196 | 575 | 2.41e-18 | 89.7 |
| MsG0780037984.01.T01 | MTR_2g034260 | 24.870 | 386 | 258 | 12 | 369 | 729 | 206 | 584 | 2.49e-18 | 89.7 |
| MsG0780037984.01.T01 | MTR_2g034250 | 24.147 | 381 | 268 | 9 | 369 | 729 | 206 | 585 | 5.73e-18 | 88.6 |
| MsG0780037984.01.T01 | MTR_4g064200 | 23.848 | 369 | 263 | 7 | 374 | 728 | 285 | 649 | 1.84e-17 | 87.0 |
| MsG0780037984.01.T01 | MTR_1g096030 | 25.686 | 401 | 237 | 16 | 370 | 728 | 77 | 458 | 2.45e-17 | 85.9 |
| MsG0780037984.01.T01 | MTR_7g109580 | 25.337 | 371 | 256 | 11 | 374 | 729 | 190 | 554 | 2.62e-17 | 86.3 |
| MsG0780037984.01.T01 | MTR_7g062120 | 22.222 | 378 | 262 | 6 | 374 | 729 | 373 | 740 | 3.93e-17 | 86.3 |
| MsG0780037984.01.T01 | MTR_2g097390 | 24.129 | 373 | 257 | 11 | 374 | 728 | 276 | 640 | 1.03e-16 | 84.7 |
| MsG0780037984.01.T01 | MTR_2g097410 | 22.572 | 381 | 257 | 9 | 374 | 728 | 372 | 740 | 1.24e-16 | 84.7 |
| MsG0780037984.01.T01 | MTR_4g064160 | 21.792 | 413 | 283 | 10 | 344 | 728 | 283 | 683 | 2.17e-16 | 84.0 |
| MsG0780037984.01.T01 | MTR_2g097463 | 21.563 | 371 | 268 | 7 | 374 | 728 | 291 | 654 | 2.28e-16 | 83.6 |
| MsG0780037984.01.T01 | MTR_2g097310 | 22.798 | 386 | 246 | 10 | 374 | 728 | 273 | 637 | 3.03e-16 | 83.2 |
| MsG0780037984.01.T01 | MTR_2g099110 | 23.274 | 391 | 251 | 10 | 374 | 729 | 75 | 451 | 4.73e-16 | 81.6 |
| MsG0780037984.01.T01 | MTR_2g097467 | 21.739 | 414 | 290 | 11 | 342 | 728 | 247 | 653 | 6.49e-16 | 82.0 |
| MsG0780037984.01.T01 | MTR_2g097380 | 22.715 | 361 | 234 | 9 | 381 | 728 | 232 | 560 | 3.76e-15 | 79.7 |
| MsG0780037984.01.T01 | MTR_4g064180 | 22.432 | 370 | 265 | 9 | 374 | 724 | 255 | 621 | 8.35e-15 | 78.6 |
| MsG0780037984.01.T01 | MTR_2g089100 | 23.039 | 408 | 243 | 15 | 374 | 728 | 53 | 442 | 1.94e-14 | 76.6 |
| MsG0780037984.01.T01 | MTR_4g064120 | 21.409 | 369 | 270 | 7 | 374 | 724 | 255 | 621 | 5.24e-14 | 75.9 |
| MsG0780037984.01.T01 | MTR_4g076140 | 32.941 | 170 | 106 | 2 | 350 | 511 | 19 | 188 | 5.98e-14 | 75.5 |
| MsG0780037984.01.T01 | MTR_2g097350 | 23.873 | 377 | 253 | 14 | 374 | 728 | 275 | 639 | 9.15e-14 | 75.5 |
| MsG0780037984.01.T01 | MTR_4g064150 | 21.505 | 372 | 274 | 6 | 374 | 728 | 362 | 732 | 1.19e-13 | 75.1 |
| MsG0780037984.01.T01 | MTR_5g015490 | 21.465 | 396 | 251 | 11 | 374 | 729 | 115 | 490 | 8.62e-13 | 71.6 |
| MsG0780037984.01.T01 | MTR_5g009080 | 27.179 | 195 | 136 | 2 | 350 | 542 | 33 | 223 | 1.21e-12 | 71.2 |
| MsG0780037984.01.T01 | MTR_3g022830 | 31.724 | 145 | 89 | 2 | 374 | 512 | 26 | 166 | 3.35e-12 | 69.7 |
| MsG0780037984.01.T01 | MTR_1g086970 | 23.457 | 405 | 269 | 16 | 354 | 729 | 86 | 478 | 4.10e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780037984.01.T01 | AT4G00150 | 56.959 | 388 | 139 | 10 | 346 | 730 | 193 | 555 | 7.63e-139 | 420 |
| MsG0780037984.01.T01 | AT2G45160 | 48.069 | 466 | 201 | 16 | 288 | 730 | 193 | 640 | 1.12e-121 | 378 |
| MsG0780037984.01.T01 | AT3G60630 | 44.950 | 505 | 202 | 17 | 267 | 730 | 154 | 623 | 1.26e-111 | 352 |
| MsG0780037984.01.T01 | AT4G36710 | 32.888 | 374 | 225 | 12 | 371 | 729 | 123 | 485 | 4.37e-55 | 197 |
| MsG0780037984.01.T01 | AT2G01570 | 29.301 | 372 | 240 | 9 | 370 | 729 | 221 | 581 | 1.37e-33 | 137 |
| MsG0780037984.01.T01 | AT5G66770 | 27.990 | 393 | 260 | 12 | 352 | 729 | 200 | 584 | 2.29e-31 | 130 |
| MsG0780037984.01.T01 | AT3G03450 | 27.321 | 377 | 246 | 10 | 370 | 729 | 180 | 545 | 2.66e-31 | 129 |
| MsG0780037984.01.T01 | AT5G17490 | 28.989 | 376 | 235 | 13 | 370 | 729 | 157 | 516 | 1.06e-30 | 127 |
| MsG0780037984.01.T01 | AT3G54220 | 28.333 | 360 | 245 | 8 | 376 | 728 | 296 | 649 | 6.17e-30 | 126 |
| MsG0780037984.01.T01 | AT2G04890 | 26.146 | 371 | 248 | 8 | 374 | 729 | 54 | 413 | 7.79e-30 | 123 |
| MsG0780037984.01.T01 | AT5G48150 | 24.731 | 372 | 260 | 8 | 374 | 729 | 123 | 490 | 5.45e-29 | 122 |
| MsG0780037984.01.T01 | AT5G48150 | 24.731 | 372 | 260 | 8 | 374 | 729 | 123 | 490 | 5.45e-29 | 122 |
| MsG0780037984.01.T01 | AT5G48150 | 24.731 | 372 | 260 | 8 | 374 | 729 | 123 | 490 | 5.45e-29 | 122 |
| MsG0780037984.01.T01 | AT5G48150 | 24.731 | 372 | 260 | 8 | 374 | 729 | 123 | 490 | 5.45e-29 | 122 |
| MsG0780037984.01.T01 | AT5G41920 | 25.122 | 410 | 266 | 10 | 336 | 729 | 16 | 400 | 9.88e-29 | 119 |
| MsG0780037984.01.T01 | AT1G14920 | 26.260 | 377 | 245 | 9 | 370 | 729 | 169 | 529 | 1.03e-28 | 121 |
| MsG0780037984.01.T01 | AT3G50650 | 28.800 | 375 | 222 | 12 | 383 | 729 | 185 | 542 | 6.66e-28 | 119 |
| MsG0780037984.01.T01 | AT1G66350 | 25.606 | 371 | 251 | 10 | 370 | 730 | 152 | 507 | 1.59e-27 | 117 |
| MsG0780037984.01.T01 | AT1G50600 | 24.194 | 372 | 261 | 7 | 374 | 729 | 160 | 526 | 3.70e-27 | 116 |
| MsG0780037984.01.T01 | AT1G50600 | 24.194 | 372 | 261 | 7 | 374 | 729 | 231 | 597 | 1.13e-26 | 115 |
| MsG0780037984.01.T01 | AT1G50600 | 24.194 | 372 | 261 | 7 | 374 | 729 | 235 | 601 | 1.22e-26 | 115 |
| MsG0780037984.01.T01 | AT4G08250 | 29.024 | 379 | 243 | 14 | 370 | 728 | 104 | 476 | 1.91e-26 | 114 |
| MsG0780037984.01.T01 | AT4G17230 | 25.789 | 380 | 245 | 8 | 374 | 729 | 159 | 525 | 2.92e-26 | 114 |
| MsG0780037984.01.T01 | AT4G17230 | 25.789 | 380 | 245 | 8 | 374 | 729 | 159 | 525 | 2.92e-26 | 114 |
| MsG0780037984.01.T01 | AT1G21450 | 24.574 | 411 | 272 | 11 | 347 | 729 | 193 | 593 | 4.46e-26 | 114 |
| MsG0780037984.01.T01 | AT5G59450 | 23.333 | 420 | 281 | 10 | 340 | 729 | 190 | 598 | 5.70e-23 | 104 |
| MsG0780037984.01.T01 | AT1G55580 | 24.771 | 327 | 220 | 6 | 419 | 729 | 129 | 445 | 1.18e-19 | 92.8 |
| MsG0780037984.01.T01 | AT1G63100 | 24.051 | 395 | 249 | 12 | 370 | 728 | 274 | 653 | 1.70e-19 | 93.6 |
| MsG0780037984.01.T01 | AT1G63100 | 24.495 | 396 | 246 | 14 | 370 | 728 | 249 | 628 | 2.02e-19 | 93.6 |
| MsG0780037984.01.T01 | AT1G07520 | 21.067 | 375 | 269 | 8 | 377 | 728 | 322 | 692 | 4.95e-18 | 89.0 |
| MsG0780037984.01.T01 | AT1G07520 | 21.067 | 375 | 269 | 8 | 377 | 728 | 323 | 693 | 5.05e-18 | 89.0 |
| MsG0780037984.01.T01 | AT1G07520 | 21.067 | 375 | 269 | 8 | 377 | 728 | 158 | 528 | 6.24e-18 | 88.2 |
| MsG0780037984.01.T01 | AT1G07520 | 21.067 | 375 | 269 | 8 | 377 | 728 | 158 | 528 | 6.24e-18 | 88.2 |
| MsG0780037984.01.T01 | AT3G46600 | 21.594 | 389 | 281 | 7 | 362 | 729 | 194 | 579 | 1.12e-16 | 84.3 |
| MsG0780037984.01.T01 | AT3G46600 | 21.594 | 389 | 281 | 7 | 362 | 729 | 162 | 547 | 2.88e-16 | 83.2 |
| MsG0780037984.01.T01 | AT3G46600 | 21.622 | 370 | 273 | 6 | 374 | 729 | 5 | 371 | 7.80e-16 | 80.5 |
| MsG0780037984.01.T01 | AT1G07530 | 22.546 | 377 | 261 | 9 | 374 | 728 | 397 | 764 | 1.14e-15 | 81.6 |
| MsG0780037984.01.T01 | AT1G50420 | 29.897 | 194 | 116 | 5 | 370 | 552 | 54 | 238 | 3.56e-15 | 79.3 |
| MsG0780037984.01.T01 | AT4G37650 | 22.081 | 394 | 258 | 10 | 374 | 729 | 147 | 529 | 1.43e-14 | 77.8 |
| MsG0780037984.01.T01 | AT5G52510 | 24.522 | 314 | 191 | 11 | 451 | 729 | 338 | 640 | 2.23e-13 | 73.9 |
| MsG0780037984.01.T01 | AT2G29065 | 21.220 | 377 | 273 | 7 | 374 | 728 | 253 | 627 | 2.35e-12 | 70.9 |
Find 154 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGTGAAGAACTGAAATT+AGG | 0.187840 | 7:-37697909 | None:intergenic |
| GGAAAAGGTGTGTTAGATTT+TGG | 0.194202 | 7:+37697273 | MsG0780037984.01.T01:CDS |
| GGCAGTTGAGAAGCTTGTTT+TGG | 0.246331 | 7:+37699198 | MsG0780037984.01.T01:CDS |
| AAGTTACCATTTGAAGAAAT+AGG | 0.249425 | 7:-37697774 | None:intergenic |
| ATTTGTTCTGATTTCCCTTT+TGG | 0.265105 | 7:+37697858 | MsG0780037984.01.T01:CDS |
| TCTTCGCCGCCACCGCTTCC+AGG | 0.267033 | 7:-37698302 | None:intergenic |
| TTCCATTATCAATTTCAATA+TGG | 0.276508 | 7:-37697625 | None:intergenic |
| AATTCCGAAGATACCCTTCT+TGG | 0.278051 | 7:+37698151 | MsG0780037984.01.T01:CDS |
| TTCCATATTGAAATTGATAA+TGG | 0.285700 | 7:+37697623 | MsG0780037984.01.T01:CDS |
| GCTTCCCCATAGGAGAAATT+TGG | 0.291304 | 7:-37698439 | None:intergenic |
| AAATGCCTCCTTAAAATAAA+AGG | 0.302232 | 7:-37698477 | None:intergenic |
| GTAGGAGTGGTTTGTTGATT+TGG | 0.323080 | 7:-37697429 | None:intergenic |
| AGATATTGAAGATGCATCTA+TGG | 0.323147 | 7:+37697647 | MsG0780037984.01.T01:CDS |
| GTATAAACTGAGCTTGGTTT+TGG | 0.329115 | 7:-37698022 | None:intergenic |
| GGAACACGCGCACGGGATAT+TGG | 0.339508 | 7:+37698403 | MsG0780037984.01.T01:CDS |
| AATGGCGCCTAAGCAGAAAA+TGG | 0.339684 | 7:+37698274 | MsG0780037984.01.T01:CDS |
| GAAGATACCCTTCTTGGATT+CGG | 0.340738 | 7:+37698157 | MsG0780037984.01.T01:CDS |
| GTTTATACCTAACCCTAGTT+TGG | 0.345137 | 7:+37698037 | MsG0780037984.01.T01:CDS |
| CAACAAGATGTTGAATTCAA+TGG | 0.350188 | 7:+37697714 | MsG0780037984.01.T01:CDS |
| CTTGTGAAGAACTGAAATTA+GGG | 0.351845 | 7:-37697908 | None:intergenic |
| CAGCATCAACAACAATCAAT+TGG | 0.353717 | 7:+37697960 | MsG0780037984.01.T01:CDS |
| AAGATACCCTTCTTGGATTC+GGG | 0.361865 | 7:+37698158 | MsG0780037984.01.T01:CDS |
| TGTTTGGTGCAGAGGATTCC+TGG | 0.364499 | 7:+37699325 | MsG0780037984.01.T01:CDS |
| TTTGCACTCCAGTCTTATTC+CGG | 0.364854 | 7:+37699094 | MsG0780037984.01.T01:CDS |
| AGTTACCATTTGAAGAAATA+GGG | 0.368741 | 7:-37697773 | None:intergenic |
| CGGGTCAAGAGATGTTTCTT+AGG | 0.388186 | 7:+37698177 | MsG0780037984.01.T01:CDS |
| ATCGGTAGAAGCGCCGCCTC+CGG | 0.394887 | 7:-37697487 | None:intergenic |
| CAATCACCAAATTTCTCCTA+TGG | 0.395643 | 7:+37698433 | MsG0780037984.01.T01:CDS |
| TATGTATTCTTCAAAGGGTA+AGG | 0.404339 | 7:-37697250 | None:intergenic |
| ACTTATAGACGCCGGTAATC+CGG | 0.404547 | 7:+37698382 | MsG0780037984.01.T01:CDS |
| CTTGACCCTATTTCTTCAAA+TGG | 0.407880 | 7:+37697768 | MsG0780037984.01.T01:CDS |
| TTCTATCCTGCGAGCGCAAA+CGG | 0.414907 | 7:-37699222 | None:intergenic |
| GTGCGCGTGTTCCGGATTAC+CGG | 0.417521 | 7:-37698393 | None:intergenic |
| GGGAACCCTGGAAGCGGTGG+CGG | 0.418143 | 7:+37698296 | MsG0780037984.01.T01:CDS |
| AGTCTCTGAATTCTGTTTCG+TGG | 0.422058 | 7:+37698891 | MsG0780037984.01.T01:CDS |
| AATATCCCGTGCGCGTGTTC+CGG | 0.422409 | 7:-37698401 | None:intergenic |
| AAGATGTGGAATGGAGGATT+GGG | 0.422443 | 7:+37697560 | MsG0780037984.01.T01:CDS |
| CGCAGCGCCGGTGGTGCTAT+CGG | 0.426723 | 7:-37697505 | None:intergenic |
| ATGGCGCCTAAGCAGAAAAT+GGG | 0.428884 | 7:+37698275 | MsG0780037984.01.T01:CDS |
| AGAGTCGCAGGCAGAGTGTT+TGG | 0.429838 | 7:+37699309 | MsG0780037984.01.T01:CDS |
| AAATTTGAAAACTGCAGAAC+AGG | 0.433172 | 7:-37698605 | None:intergenic |
| CCACAGCTTCAAGCAATGCT+TGG | 0.439953 | 7:-37698637 | None:intergenic |
| TCGATCATCTGAAGGACATC+CGG | 0.441979 | 7:-37699157 | None:intergenic |
| TAATTTGAGAAAGAGCAAAT+AGG | 0.442683 | 7:-37698956 | None:intergenic |
| ACTAGCCTCTTGCTCAAGAT+TGG | 0.445518 | 7:+37698554 | MsG0780037984.01.T01:CDS |
| ATCTCATCTCGGTTTCAACT+TGG | 0.447156 | 7:+37699407 | MsG0780037984.01.T01:CDS |
| TTTCCTATGTATTCTTCAAA+GGG | 0.453051 | 7:-37697255 | None:intergenic |
| AAAGATGTGGAATGGAGGAT+TGG | 0.456441 | 7:+37697559 | MsG0780037984.01.T01:CDS |
| AGCAGCAGTAGCAGTGGTAG+TGG | 0.460125 | 7:-37697832 | None:intergenic |
| TTCATCCCTCTACTACCAAA+AGG | 0.463150 | 7:-37697873 | None:intergenic |
| TCACAAGTTTCACTTTCTCA+TGG | 0.465348 | 7:+37697924 | MsG0780037984.01.T01:CDS |
| GGTGCAGAGGATTCCTGGTA+GGG | 0.470286 | 7:+37699330 | MsG0780037984.01.T01:CDS |
| ATCAAGTGATTCAAGCAAAC+CGG | 0.470386 | 7:-37699113 | None:intergenic |
| TCGCAATCGCGTAGTGGCTG+CGG | 0.474481 | 7:-37698914 | None:intergenic |
| TAAAAGGCAGCCCTTTGAAA+AGG | 0.479249 | 7:-37698461 | None:intergenic |
| GCCTAAAATTGTCGTAACAT+TGG | 0.480828 | 7:+37699024 | MsG0780037984.01.T01:CDS |
| AGGGAAAATTGTTGCTATGC+GGG | 0.481377 | 7:+37697366 | MsG0780037984.01.T01:CDS |
| CTCGATTTCGTCGTGGTGTG+AGG | 0.481816 | 7:-37698789 | None:intergenic |
| CGCAGGATAGAACACTTCCC+TGG | 0.482072 | 7:+37699233 | MsG0780037984.01.T01:CDS |
| AGCTTCAAGCAATGCTTGGT+TGG | 0.488113 | 7:-37698633 | None:intergenic |
| TTTGAAGAATACATAGGAAA+AGG | 0.490303 | 7:+37697258 | MsG0780037984.01.T01:CDS |
| GGTTAGGTATAAACTGAGCT+TGG | 0.491230 | 7:-37698028 | None:intergenic |
| AGCATCAACAACAATCAATT+GGG | 0.491428 | 7:+37697961 | MsG0780037984.01.T01:CDS |
| TTTGGGCCGTTTGCGCTCGC+AGG | 0.491743 | 7:+37699216 | MsG0780037984.01.T01:CDS |
| TGGTGCAGAGGATTCCTGGT+AGG | 0.496504 | 7:+37699329 | MsG0780037984.01.T01:CDS |
| ACGCGATTGCGAAGCAGTTG+TGG | 0.497464 | 7:+37698925 | MsG0780037984.01.T01:CDS |
| TCACACGGTAGCGCCGGAGG+CGG | 0.497760 | 7:+37697474 | MsG0780037984.01.T01:CDS |
| AGCACTAAAGGCAGGTATGA+AGG | 0.498213 | 7:-37698980 | None:intergenic |
| ATCTTGAGCAAGAGGCTAGT+TGG | 0.505941 | 7:-37698551 | None:intergenic |
| CCATTGTCCTCTGCTGCAGA+TGG | 0.506974 | 7:-37698256 | None:intergenic |
| CGAGAAATACTATCTTCAAC+CGG | 0.509431 | 7:+37699177 | MsG0780037984.01.T01:CDS |
| AATCACCAAATTTCTCCTAT+GGG | 0.509811 | 7:+37698434 | MsG0780037984.01.T01:CDS |
| GAATCCAAGAAGGGTATCTT+CGG | 0.510787 | 7:-37698155 | None:intergenic |
| CGGTGGCGGCGAAGATGTAT+CGG | 0.512246 | 7:+37698310 | MsG0780037984.01.T01:CDS |
| CGATCATCTGAAGGACATCC+GGG | 0.514286 | 7:-37699156 | None:intergenic |
| ACAATGGTCTTCATTTATGC+AGG | 0.517675 | 7:+37698709 | MsG0780037984.01.T01:CDS |
| GTGCAGAGGATTCCTGGTAG+GGG | 0.518621 | 7:+37699331 | MsG0780037984.01.T01:CDS |
| AAAATCATATGCTGAGGAAA+CGG | 0.519993 | 7:-37699073 | None:intergenic |
| TTACCCTTTGAAGAATACAT+AGG | 0.522370 | 7:+37697252 | MsG0780037984.01.T01:CDS |
| AAAACAAGCTTCTCAACTGC+CGG | 0.524789 | 7:-37699196 | None:intergenic |
| CCAAGCATTGCTTGAAGCTG+TGG | 0.524919 | 7:+37698637 | MsG0780037984.01.T01:CDS |
| CTTCGCCGCCACCGCTTCCA+GGG | 0.526440 | 7:-37698301 | None:intergenic |
| AGAACTCACTTGTCTTGTGT+TGG | 0.527376 | 7:+37699374 | MsG0780037984.01.T01:CDS |
| CACTTGTCTTGTGTTGGCAA+AGG | 0.532124 | 7:+37699380 | MsG0780037984.01.T01:CDS |
| TCATCCCTCTACTACCAAAA+GGG | 0.532544 | 7:-37697872 | None:intergenic |
| ATGGGGAACCCTGGAAGCGG+TGG | 0.534973 | 7:+37698293 | MsG0780037984.01.T01:CDS |
| TGTCTTGTGTTGGCAAAGGA+AGG | 0.536796 | 7:+37699384 | MsG0780037984.01.T01:CDS |
| TAGTAACTTCACAGAGTCGC+AGG | 0.538196 | 7:+37699297 | MsG0780037984.01.T01:CDS |
| GACAGTGTTGAGGATGAAGT+AGG | 0.538311 | 7:-37697447 | None:intergenic |
| CTCTTGACCCGAATCCAAGA+AGG | 0.539089 | 7:-37698165 | None:intergenic |
| CAAGCAAACCGGAATAAGAC+TGG | 0.539954 | 7:-37699102 | None:intergenic |
| TCCACATGGAATCCCCTACC+AGG | 0.543648 | 7:-37699343 | None:intergenic |
| GATATTGAAGATGCATCTAT+GGG | 0.546979 | 7:+37697648 | MsG0780037984.01.T01:CDS |
| TTTGTTGGCCGCAGCGCCGG+TGG | 0.548083 | 7:-37697514 | None:intergenic |
| AAGCACCAATCTTGAGCAAG+AGG | 0.549041 | 7:-37698559 | None:intergenic |
| CTTTGAAAAGGCTTCCCCAT+AGG | 0.549307 | 7:-37698449 | None:intergenic |
| CAAGTTTCACTTTCTCATGG+TGG | 0.549648 | 7:+37697927 | MsG0780037984.01.T01:CDS |
| GCCTCCGGCGCTACCGTGTG+AGG | 0.550488 | 7:-37697472 | None:intergenic |
| TGAAGGTAAAAGATGTGGAA+TGG | 0.553057 | 7:+37697551 | MsG0780037984.01.T01:CDS |
| TTCCTCACCATCTGCAGCAG+AGG | 0.556566 | 7:+37698249 | MsG0780037984.01.T01:CDS |
| ATCGGCTCATCAGTTTCAGC+AGG | 0.556576 | 7:+37698328 | MsG0780037984.01.T01:CDS |
| TTCACGAATCGAAGCACTAA+AGG | 0.557184 | 7:-37698992 | None:intergenic |
| TGTTGAGGATGAAGTAGGAG+TGG | 0.560505 | 7:-37697442 | None:intergenic |
| TCGATTTCGTCGTGGTGTGA+GGG | 0.560923 | 7:-37698788 | None:intergenic |
| GTCAAGAGATGTTTCTTAGG+AGG | 0.562943 | 7:+37698180 | MsG0780037984.01.T01:CDS |
| AGGCAGAGTGTTTGGTGCAG+AGG | 0.564913 | 7:+37699317 | MsG0780037984.01.T01:CDS |
| GAATGATCTTGATCTTGACT+TGG | 0.565052 | 7:-37697603 | None:intergenic |
| GCACTAAAGGCAGGTATGAA+GGG | 0.565237 | 7:-37698979 | None:intergenic |
| AAGCAGAAAATGGGGAACCC+TGG | 0.568423 | 7:+37698284 | MsG0780037984.01.T01:CDS |
| TCCTCACACGGTAGCGCCGG+AGG | 0.569283 | 7:+37697471 | MsG0780037984.01.T01:CDS |
| TCTTCCTCACACGGTAGCGC+CGG | 0.570460 | 7:+37697468 | MsG0780037984.01.T01:CDS |
| GAGAATCTGAAGCAATATGC+TGG | 0.570600 | 7:+37698827 | MsG0780037984.01.T01:CDS |
| AATCTCAGCAGCAGTAGCAG+TGG | 0.572943 | 7:-37697838 | None:intergenic |
| GGTAATCCGGAACACGCGCA+CGG | 0.575492 | 7:+37698395 | MsG0780037984.01.T01:CDS |
| GTCCTCTGCTGCAGATGGTG+AGG | 0.576808 | 7:-37698251 | None:intergenic |
| GAGGCTGAAGCTGAATCTCT+CGG | 0.577024 | 7:-37698094 | None:intergenic |
| CAAATTGAAGGTAAAAGATG+TGG | 0.580900 | 7:+37697546 | MsG0780037984.01.T01:CDS |
| AAAACCTACTCTTGTCATCA+GGG | 0.582681 | 7:+37699257 | MsG0780037984.01.T01:CDS |
| GCATTGCTTGAAGCTGTGGA+AGG | 0.584725 | 7:+37698641 | MsG0780037984.01.T01:CDS |
| CGAATCGAAGCACTAAAGGC+AGG | 0.590451 | 7:-37698988 | None:intergenic |
| GTAATCCGGAACACGCGCAC+GGG | 0.591224 | 7:+37698396 | MsG0780037984.01.T01:CDS |
| GCAAAGGAAGGATCTCATCT+CGG | 0.596929 | 7:+37699396 | MsG0780037984.01.T01:CDS |
| AGTATTTCTCGATCATCTGA+AGG | 0.598913 | 7:-37699165 | None:intergenic |
| GCTTCTACCGATAGCACCAC+CGG | 0.599672 | 7:+37697498 | MsG0780037984.01.T01:CDS |
| GGATAGGAGTTGTGATCGAA+CGG | 0.600755 | 7:+37699045 | MsG0780037984.01.T01:CDS |
| ATGTATTCTTCAAAGGGTAA+GGG | 0.603369 | 7:-37697249 | None:intergenic |
| CCATCTGCAGCAGAGGACAA+TGG | 0.604634 | 7:+37698256 | MsG0780037984.01.T01:CDS |
| TTATGCAGGAGTTAGCACTA+AGG | 0.606201 | 7:+37698723 | MsG0780037984.01.T01:CDS |
| AGTTCTGCTTCTTCTCCACA+TGG | 0.609894 | 7:-37699357 | None:intergenic |
| AAAATGGGGAACCCTGGAAG+CGG | 0.610138 | 7:+37698290 | MsG0780037984.01.T01:CDS |
| TGCAGCTGAGAGTGTGTGAA+AGG | 0.610994 | 7:-37698065 | None:intergenic |
| AAATTGTCGTAACATTGGAT+AGG | 0.615531 | 7:+37699029 | MsG0780037984.01.T01:CDS |
| ACGCGCACGGGATATTGGCG+CGG | 0.617795 | 7:+37698408 | MsG0780037984.01.T01:CDS |
| CGATAGCACCACCGGCGCTG+CGG | 0.619257 | 7:+37697506 | MsG0780037984.01.T01:CDS |
| AGGTAAAAGATGTGGAATGG+AGG | 0.623374 | 7:+37697554 | MsG0780037984.01.T01:CDS |
| AGAACCCTGATGACAAGAGT+AGG | 0.623547 | 7:-37699261 | None:intergenic |
| CAGGAGTTAGCACTAAGGAA+TGG | 0.623926 | 7:+37698728 | MsG0780037984.01.T01:CDS |
| GTGAAGTTACTAAATGTCAA+CGG | 0.630606 | 7:-37699286 | None:intergenic |
| TCTTGACCCGAATCCAAGAA+GGG | 0.632079 | 7:-37698164 | None:intergenic |
| ATCACCAAATTTCTCCTATG+GGG | 0.632427 | 7:+37698435 | MsG0780037984.01.T01:CDS |
| TCAACACTGTCTTCCTCACA+CGG | 0.633334 | 7:+37697459 | MsG0780037984.01.T01:CDS |
| TGGTTCATAACAAACTGATG+AGG | 0.638887 | 7:-37698002 | None:intergenic |
| TCCTGGTAGGGGATTCCATG+TGG | 0.639151 | 7:+37699342 | MsG0780037984.01.T01:CDS |
| ACTGCTTCGCAATCGCGTAG+TGG | 0.643756 | 7:-37698920 | None:intergenic |
| AATGCAGTGATCTTGAGTGC+AGG | 0.644744 | 7:-37698758 | None:intergenic |
| GAGGGAAAATTGTTGCTATG+CGG | 0.647727 | 7:+37697365 | MsG0780037984.01.T01:CDS |
| GAGTTAGCACTAAGGAATGG+TGG | 0.649571 | 7:+37698731 | MsG0780037984.01.T01:CDS |
| CCAGCTAAAAGACTCAATTG+TGG | 0.675226 | 7:+37698116 | MsG0780037984.01.T01:CDS |
| TGTTAGTGTTAATGTCCACC+CGG | 0.680851 | 7:+37699138 | MsG0780037984.01.T01:CDS |
| TGGCGCCTAAGCAGAAAATG+GGG | 0.686084 | 7:+37698276 | MsG0780037984.01.T01:CDS |
| GCTGCAGAACTTATAGACGC+CGG | 0.689078 | 7:+37698374 | MsG0780037984.01.T01:CDS |
| AACTAAGCTCGATTTCGTCG+TGG | 0.700452 | 7:-37698796 | None:intergenic |
| TCATCTGAAGGACATCCGGG+TGG | 0.719806 | 7:-37699153 | None:intergenic |
| GTGTGAGGAAGACAGTGTTG+AGG | 0.783398 | 7:-37697457 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATATAATAGATTTTGATAT+TGG | + | Chr7:37698677-37698696 | MsG0780037984.01.T01:CDS | 15.0% |
| !! | TTCCATATTGAAATTGATAA+TGG | + | Chr7:37697623-37697642 | MsG0780037984.01.T01:CDS | 20.0% |
| !! | TTCCATTATCAATTTCAATA+TGG | - | Chr7:37697628-37697647 | None:intergenic | 20.0% |
| !!! | ATAGATTTTGATATTGGTTT+TGG | + | Chr7:37698683-37698702 | MsG0780037984.01.T01:CDS | 20.0% |
| !!! | ATTCAATGGTTTTAGTTTTA+TGG | + | Chr7:37697728-37697747 | MsG0780037984.01.T01:CDS | 20.0% |
| ! | AAAAACATACCACAAATTGA+AGG | + | Chr7:37697534-37697553 | MsG0780037984.01.T01:CDS | 25.0% |
| ! | AAATGCCTCCTTAAAATAAA+AGG | - | Chr7:37698480-37698499 | None:intergenic | 25.0% |
| ! | AAGTTACCATTTGAAGAAAT+AGG | - | Chr7:37697777-37697796 | None:intergenic | 25.0% |
| ! | AGTTACCATTTGAAGAAATA+GGG | - | Chr7:37697776-37697795 | None:intergenic | 25.0% |
| ! | TAATTTGAGAAAGAGCAAAT+AGG | - | Chr7:37698959-37698978 | None:intergenic | 25.0% |
| ! | TCAAAAACAACAACAGAATT+GGG | - | Chr7:37697399-37697418 | None:intergenic | 25.0% |
| ! | TTTCCTATGTATTCTTCAAA+GGG | - | Chr7:37697258-37697277 | None:intergenic | 25.0% |
| ! | TTTGAAGAATACATAGGAAA+AGG | + | Chr7:37697258-37697277 | MsG0780037984.01.T01:CDS | 25.0% |
| !! | TATAATTGATCAGCTTTTCA+AGG | + | Chr7:37698352-37698371 | MsG0780037984.01.T01:CDS | 25.0% |
| !! | TTTTCCTATGTATTCTTCAA+AGG | - | Chr7:37697259-37697278 | None:intergenic | 25.0% |
| !!! | AATTTGTGGTATGTTTTTGT+TGG | - | Chr7:37697532-37697551 | None:intergenic | 25.0% |
| !!! | TTTGTTGATTTGGTTTTTTG+AGG | - | Chr7:37697422-37697441 | None:intergenic | 25.0% |
| AAAATCATATGCTGAGGAAA+CGG | - | Chr7:37699076-37699095 | None:intergenic | 30.0% | |
| AAATTGTCGTAACATTGGAT+AGG | + | Chr7:37699029-37699048 | MsG0780037984.01.T01:CDS | 30.0% | |
| AAATTTGAAAACTGCAGAAC+AGG | - | Chr7:37698608-37698627 | None:intergenic | 30.0% | |
| AATCACCAAATTTCTCCTAT+GGG | + | Chr7:37698434-37698453 | MsG0780037984.01.T01:CDS | 30.0% | |
| ACTTGTGAAGAACTGAAATT+AGG | - | Chr7:37697912-37697931 | None:intergenic | 30.0% | |
| AGATATTGAAGATGCATCTA+TGG | + | Chr7:37697647-37697666 | MsG0780037984.01.T01:CDS | 30.0% | |
| AGCATCAACAACAATCAATT+GGG | + | Chr7:37697961-37697980 | MsG0780037984.01.T01:CDS | 30.0% | |
| ATGTATTCTTCAAAGGGTAA+GGG | - | Chr7:37697252-37697271 | None:intergenic | 30.0% | |
| CAAATTGAAGGTAAAAGATG+TGG | + | Chr7:37697546-37697565 | MsG0780037984.01.T01:CDS | 30.0% | |
| CAACAAGATGTTGAATTCAA+TGG | + | Chr7:37697714-37697733 | MsG0780037984.01.T01:CDS | 30.0% | |
| CTTGTGAAGAACTGAAATTA+GGG | - | Chr7:37697911-37697930 | None:intergenic | 30.0% | |
| GATATTGAAGATGCATCTAT+GGG | + | Chr7:37697648-37697667 | MsG0780037984.01.T01:CDS | 30.0% | |
| GTCAAAAACAACAACAGAAT+TGG | - | Chr7:37697400-37697419 | None:intergenic | 30.0% | |
| GTGAAGTTACTAAATGTCAA+CGG | - | Chr7:37699289-37699308 | None:intergenic | 30.0% | |
| TATGTATTCTTCAAAGGGTA+AGG | - | Chr7:37697253-37697272 | None:intergenic | 30.0% | |
| TGAAAGGAAAAACCAAACTA+GGG | - | Chr7:37698052-37698071 | None:intergenic | 30.0% | |
| ! | ATTTGTTCTGATTTCCCTTT+TGG | + | Chr7:37697858-37697877 | MsG0780037984.01.T01:CDS | 30.0% |
| ! | CATCTTTTACCTTCAATTTG+TGG | - | Chr7:37697546-37697565 | None:intergenic | 30.0% |
| ! | TCCAATGTTACGACAATTTT+AGG | - | Chr7:37699028-37699047 | None:intergenic | 30.0% |
| ! | TTAAGCAAGCTTTTACAAGT+TGG | + | Chr7:37697672-37697691 | MsG0780037984.01.T01:CDS | 30.0% |
| ! | TTACCCTTTGAAGAATACAT+AGG | + | Chr7:37697252-37697271 | MsG0780037984.01.T01:CDS | 30.0% |
| !!! | GATTTTGATATTGGTTTTGG+TGG | + | Chr7:37698686-37698705 | MsG0780037984.01.T01:CDS | 30.0% |
| AAAAACCTACTCTTGTCATC+AGG | + | Chr7:37699256-37699275 | MsG0780037984.01.T01:CDS | 35.0% | |
| AAAACCTACTCTTGTCATCA+GGG | + | Chr7:37699257-37699276 | MsG0780037984.01.T01:CDS | 35.0% | |
| ACAATGGTCTTCATTTATGC+AGG | + | Chr7:37698709-37698728 | MsG0780037984.01.T01:CDS | 35.0% | |
| AGTATTTCTCGATCATCTGA+AGG | - | Chr7:37699168-37699187 | None:intergenic | 35.0% | |
| AGTGCAAAAATCATATGCTG+AGG | - | Chr7:37699082-37699101 | None:intergenic | 35.0% | |
| ATCAAGTGATTCAAGCAAAC+CGG | - | Chr7:37699116-37699135 | None:intergenic | 35.0% | |
| ATCACCAAATTTCTCCTATG+GGG | + | Chr7:37698435-37698454 | MsG0780037984.01.T01:CDS | 35.0% | |
| CAATCACCAAATTTCTCCTA+TGG | + | Chr7:37698433-37698452 | MsG0780037984.01.T01:CDS | 35.0% | |
| CAGCATCAACAACAATCAAT+TGG | + | Chr7:37697960-37697979 | MsG0780037984.01.T01:CDS | 35.0% | |
| CGAGAAATACTATCTTCAAC+CGG | + | Chr7:37699177-37699196 | MsG0780037984.01.T01:CDS | 35.0% | |
| GAATGATCTTGATCTTGACT+TGG | - | Chr7:37697606-37697625 | None:intergenic | 35.0% | |
| GCCTAAAATTGTCGTAACAT+TGG | + | Chr7:37699024-37699043 | MsG0780037984.01.T01:CDS | 35.0% | |
| GTGAAAGGAAAAACCAAACT+AGG | - | Chr7:37698053-37698072 | None:intergenic | 35.0% | |
| GTTTATACCTAACCCTAGTT+TGG | + | Chr7:37698037-37698056 | MsG0780037984.01.T01:CDS | 35.0% | |
| TCACAAGTTTCACTTTCTCA+TGG | + | Chr7:37697924-37697943 | MsG0780037984.01.T01:CDS | 35.0% | |
| TGAAGGTAAAAGATGTGGAA+TGG | + | Chr7:37697551-37697570 | MsG0780037984.01.T01:CDS | 35.0% | |
| TGGTTCATAACAAACTGATG+AGG | - | Chr7:37698005-37698024 | None:intergenic | 35.0% | |
| ! | CTTGACCCTATTTCTTCAAA+TGG | + | Chr7:37697768-37697787 | MsG0780037984.01.T01:CDS | 35.0% |
| ! | GTATAAACTGAGCTTGGTTT+TGG | - | Chr7:37698025-37698044 | None:intergenic | 35.0% |
| ! | TGTTTTCTCAACAGCAAGAA+CGG | + | Chr7:37697328-37697347 | MsG0780037984.01.T01:CDS | 35.0% |
| !! | ATTTCCCTTTTGGTAGTAGA+GGG | + | Chr7:37697868-37697887 | MsG0780037984.01.T01:CDS | 35.0% |
| !! | GGAAAAGGTGTGTTAGATTT+TGG | + | Chr7:37697273-37697292 | MsG0780037984.01.T01:CDS | 35.0% |
| !!! | AAGGGCTGCCTTTTATTTTA+AGG | + | Chr7:37698469-37698488 | MsG0780037984.01.T01:CDS | 35.0% |
| !!! | ATATTGGTTTTGGTGGACAA+TGG | + | Chr7:37698693-37698712 | MsG0780037984.01.T01:CDS | 35.0% |
| AAAACAAGCTTCTCAACTGC+CGG | - | Chr7:37699199-37699218 | None:intergenic | 40.0% | |
| AAAGATGTGGAATGGAGGAT+TGG | + | Chr7:37697559-37697578 | MsG0780037984.01.T01:CDS | 40.0% | |
| AAGATACCCTTCTTGGATTC+GGG | + | Chr7:37698158-37698177 | MsG0780037984.01.T01:CDS | 40.0% | |
| AAGATGTGGAATGGAGGATT+GGG | + | Chr7:37697560-37697579 | MsG0780037984.01.T01:CDS | 40.0% | |
| AATTCCGAAGATACCCTTCT+TGG | + | Chr7:37698151-37698170 | MsG0780037984.01.T01:CDS | 40.0% | |
| AGAACTCACTTGTCTTGTGT+TGG | + | Chr7:37699374-37699393 | MsG0780037984.01.T01:CDS | 40.0% | |
| AGGGAAAATTGTTGCTATGC+GGG | + | Chr7:37697366-37697385 | MsG0780037984.01.T01:CDS | 40.0% | |
| AGGTAAAAGATGTGGAATGG+AGG | + | Chr7:37697554-37697573 | MsG0780037984.01.T01:CDS | 40.0% | |
| AGTCTCTGAATTCTGTTTCG+TGG | + | Chr7:37698891-37698910 | MsG0780037984.01.T01:CDS | 40.0% | |
| ATCTCATCTCGGTTTCAACT+TGG | + | Chr7:37699407-37699426 | MsG0780037984.01.T01:CDS | 40.0% | |
| CAAGTTTCACTTTCTCATGG+TGG | + | Chr7:37697927-37697946 | MsG0780037984.01.T01:CDS | 40.0% | |
| CCAGCTAAAAGACTCAATTG+TGG | + | Chr7:37698116-37698135 | MsG0780037984.01.T01:CDS | 40.0% | |
| GAAGATACCCTTCTTGGATT+CGG | + | Chr7:37698157-37698176 | MsG0780037984.01.T01:CDS | 40.0% | |
| GAGGGAAAATTGTTGCTATG+CGG | + | Chr7:37697365-37697384 | MsG0780037984.01.T01:CDS | 40.0% | |
| GGAAAAACCAAACTAGGGTT+AGG | - | Chr7:37698047-37698066 | None:intergenic | 40.0% | |
| GGTTAGGTATAAACTGAGCT+TGG | - | Chr7:37698031-37698050 | None:intergenic | 40.0% | |
| GTCAAGAGATGTTTCTTAGG+AGG | + | Chr7:37698180-37698199 | MsG0780037984.01.T01:CDS | 40.0% | |
| TCATCCCTCTACTACCAAAA+GGG | - | Chr7:37697875-37697894 | None:intergenic | 40.0% | |
| TGTTAGTGTTAATGTCCACC+CGG | + | Chr7:37699138-37699157 | MsG0780037984.01.T01:CDS | 40.0% | |
| TTATGCAGGAGTTAGCACTA+AGG | + | Chr7:37698723-37698742 | MsG0780037984.01.T01:CDS | 40.0% | |
| TTCATCCCTCTACTACCAAA+AGG | - | Chr7:37697876-37697895 | None:intergenic | 40.0% | |
| ! | AAGAACGGTTTTTGCAAAGG+TGG | + | Chr7:37697343-37697362 | MsG0780037984.01.T01:CDS | 40.0% |
| ! | AGCAAGAACGGTTTTTGCAA+AGG | + | Chr7:37697340-37697359 | MsG0780037984.01.T01:CDS | 40.0% |
| ! | CCACAATTGAGTCTTTTAGC+TGG | - | Chr7:37698119-37698138 | None:intergenic | 40.0% |
| ! | GACAAGAGTAGGTTTTTCCA+GGG | - | Chr7:37699253-37699272 | None:intergenic | 40.0% |
| ! | GAGAATCTGAAGCAATATGC+TGG | + | Chr7:37698827-37698846 | MsG0780037984.01.T01:CDS | 40.0% |
| ! | TAAAAGGCAGCCCTTTGAAA+AGG | - | Chr7:37698464-37698483 | None:intergenic | 40.0% |
| ! | TATGGGGAAGCCTTTTCAAA+GGG | + | Chr7:37698451-37698470 | MsG0780037984.01.T01:CDS | 40.0% |
| ! | TGACAAGAGTAGGTTTTTCC+AGG | - | Chr7:37699254-37699273 | None:intergenic | 40.0% |
| ! | TTCACGAATCGAAGCACTAA+AGG | - | Chr7:37698995-37699014 | None:intergenic | 40.0% |
| !! | CAATTGAGTCTTTTAGCTGG+AGG | - | Chr7:37698116-37698135 | None:intergenic | 40.0% |
| !! | GAATCCAAGAAGGGTATCTT+CGG | - | Chr7:37698158-37698177 | None:intergenic | 40.0% |
| !! | GATTTCCCTTTTGGTAGTAG+AGG | + | Chr7:37697867-37697886 | MsG0780037984.01.T01:CDS | 40.0% |
| !! | GCAGTTGAGAAGCTTGTTTT+GGG | + | Chr7:37699199-37699218 | MsG0780037984.01.T01:CDS | 40.0% |
| !! | GTAGGAGTGGTTTGTTGATT+TGG | - | Chr7:37697432-37697451 | None:intergenic | 40.0% |
| !! | TTTGCACTCCAGTCTTATTC+CGG | + | Chr7:37699094-37699113 | MsG0780037984.01.T01:CDS | 40.0% |
| !!! | GGCTGCCTTTTATTTTAAGG+AGG | + | Chr7:37698472-37698491 | MsG0780037984.01.T01:CDS | 40.0% |
| AACTAAGCTCGATTTCGTCG+TGG | - | Chr7:37698799-37698818 | None:intergenic | 45.0% | |
| AAGCACCAATCTTGAGCAAG+AGG | - | Chr7:37698562-37698581 | None:intergenic | 45.0% | |
| AATGCAGTGATCTTGAGTGC+AGG | - | Chr7:37698761-37698780 | None:intergenic | 45.0% | |
| AATGGCGCCTAAGCAGAAAA+TGG | + | Chr7:37698274-37698293 | MsG0780037984.01.T01:CDS | 45.0% | |
| ACTTATAGACGCCGGTAATC+CGG | + | Chr7:37698382-37698401 | MsG0780037984.01.T01:CDS | 45.0% | |
| AGAACCCTGATGACAAGAGT+AGG | - | Chr7:37699264-37699283 | None:intergenic | 45.0% | |
| AGCACTAAAGGCAGGTATGA+AGG | - | Chr7:37698983-37699002 | None:intergenic | 45.0% | |
| AGCTTCAAGCAATGCTTGGT+TGG | - | Chr7:37698636-37698655 | None:intergenic | 45.0% | |
| AGTTCTGCTTCTTCTCCACA+TGG | - | Chr7:37699360-37699379 | None:intergenic | 45.0% | |
| ATCTTGAGCAAGAGGCTAGT+TGG | - | Chr7:37698554-37698573 | None:intergenic | 45.0% | |
| ATGGCGCCTAAGCAGAAAAT+GGG | + | Chr7:37698275-37698294 | MsG0780037984.01.T01:CDS | 45.0% | |
| CAAGCAAACCGGAATAAGAC+TGG | - | Chr7:37699105-37699124 | None:intergenic | 45.0% | |
| CAGGAGTTAGCACTAAGGAA+TGG | + | Chr7:37698728-37698747 | MsG0780037984.01.T01:CDS | 45.0% | |
| CGGGTCAAGAGATGTTTCTT+AGG | + | Chr7:37698177-37698196 | MsG0780037984.01.T01:CDS | 45.0% | |
| GAGTTAGCACTAAGGAATGG+TGG | + | Chr7:37698731-37698750 | MsG0780037984.01.T01:CDS | 45.0% | |
| GCAAAGGAAGGATCTCATCT+CGG | + | Chr7:37699396-37699415 | MsG0780037984.01.T01:CDS | 45.0% | |
| GCACTAAAGGCAGGTATGAA+GGG | - | Chr7:37698982-37699001 | None:intergenic | 45.0% | |
| GCTTCCCCATAGGAGAAATT+TGG | - | Chr7:37698442-37698461 | None:intergenic | 45.0% | |
| GGATAGGAGTTGTGATCGAA+CGG | + | Chr7:37699045-37699064 | MsG0780037984.01.T01:CDS | 45.0% | |
| TAGTAACTTCACAGAGTCGC+AGG | + | Chr7:37699297-37699316 | MsG0780037984.01.T01:CDS | 45.0% | |
| TCAACACTGTCTTCCTCACA+CGG | + | Chr7:37697459-37697478 | MsG0780037984.01.T01:CDS | 45.0% | |
| TCGATCATCTGAAGGACATC+CGG | - | Chr7:37699160-37699179 | None:intergenic | 45.0% | |
| TCTTGACCCGAATCCAAGAA+GGG | - | Chr7:37698167-37698186 | None:intergenic | 45.0% | |
| TGTTGAGGATGAAGTAGGAG+TGG | - | Chr7:37697445-37697464 | None:intergenic | 45.0% | |
| ! | AACGGTTTTTGCAAAGGTGG+AGG | + | Chr7:37697346-37697365 | MsG0780037984.01.T01:CDS | 45.0% |
| ! | ACGGTTTTTGCAAAGGTGGA+GGG | + | Chr7:37697347-37697366 | MsG0780037984.01.T01:CDS | 45.0% |
| ! | ACTAGCCTCTTGCTCAAGAT+TGG | + | Chr7:37698554-37698573 | MsG0780037984.01.T01:CDS | 45.0% |
| ! | CACTTGTCTTGTGTTGGCAA+AGG | + | Chr7:37699380-37699399 | MsG0780037984.01.T01:CDS | 45.0% |
| ! | CTATGGGGAAGCCTTTTCAA+AGG | + | Chr7:37698450-37698469 | MsG0780037984.01.T01:CDS | 45.0% |
| ! | CTTTGAAAAGGCTTCCCCAT+AGG | - | Chr7:37698452-37698471 | None:intergenic | 45.0% |
| ! | GACAGTGTTGAGGATGAAGT+AGG | - | Chr7:37697450-37697469 | None:intergenic | 45.0% |
| ! | TGTCTTGTGTTGGCAAAGGA+AGG | + | Chr7:37699384-37699403 | MsG0780037984.01.T01:CDS | 45.0% |
| !! | GGCAGTTGAGAAGCTTGTTT+TGG | + | Chr7:37699198-37699217 | MsG0780037984.01.T01:CDS | 45.0% |
| AAAATGGGGAACCCTGGAAG+CGG | + | Chr7:37698290-37698309 | MsG0780037984.01.T01:CDS | 50.0% | |
| AAGCAGAAAATGGGGAACCC+TGG | + | Chr7:37698284-37698303 | MsG0780037984.01.T01:CDS | 50.0% | |
| AATCTCAGCAGCAGTAGCAG+TGG | - | Chr7:37697841-37697860 | None:intergenic | 50.0% | |
| CCACAGCTTCAAGCAATGCT+TGG | - | Chr7:37698640-37698659 | None:intergenic | 50.0% | |
| CGATCATCTGAAGGACATCC+GGG | - | Chr7:37699159-37699178 | None:intergenic | 50.0% | |
| CTCTTGACCCGAATCCAAGA+AGG | - | Chr7:37698168-37698187 | None:intergenic | 50.0% | |
| GAGGCTGAAGCTGAATCTCT+CGG | - | Chr7:37698097-37698116 | None:intergenic | 50.0% | |
| GCATTGCTTGAAGCTGTGGA+AGG | + | Chr7:37698641-37698660 | MsG0780037984.01.T01:CDS | 50.0% | |
| GCTGCAGAACTTATAGACGC+CGG | + | Chr7:37698374-37698393 | MsG0780037984.01.T01:CDS | 50.0% | |
| GTGTGAGGAAGACAGTGTTG+AGG | - | Chr7:37697460-37697479 | None:intergenic | 50.0% | |
| TCGATTTCGTCGTGGTGTGA+GGG | - | Chr7:37698791-37698810 | None:intergenic | 50.0% | |
| TGGCGCCTAAGCAGAAAATG+GGG | + | Chr7:37698276-37698295 | MsG0780037984.01.T01:CDS | 50.0% | |
| TTCTATCCTGCGAGCGCAAA+CGG | - | Chr7:37699225-37699244 | None:intergenic | 50.0% | |
| ! | ATCGGCTCATCAGTTTCAGC+AGG | + | Chr7:37698328-37698347 | MsG0780037984.01.T01:CDS | 50.0% |
| ! | CCAAGCATTGCTTGAAGCTG+TGG | + | Chr7:37698637-37698656 | MsG0780037984.01.T01:CDS | 50.0% |
| ! | CGAATCGAAGCACTAAAGGC+AGG | - | Chr7:37698991-37699010 | None:intergenic | 50.0% |
| ! | GGGTTCCCCATTTTCTGCTT+AGG | - | Chr7:37698284-37698303 | None:intergenic | 50.0% |
| ! | TGCAGCTGAGAGTGTGTGAA+AGG | - | Chr7:37698068-37698087 | None:intergenic | 50.0% |
| !! | TGTTTGGTGCAGAGGATTCC+TGG | + | Chr7:37699325-37699344 | MsG0780037984.01.T01:CDS | 50.0% |
| AATATCCCGTGCGCGTGTTC+CGG | - | Chr7:37698404-37698423 | None:intergenic | 55.0% | |
| ACGCGATTGCGAAGCAGTTG+TGG | + | Chr7:37698925-37698944 | MsG0780037984.01.T01:CDS | 55.0% | |
| ACTGCTTCGCAATCGCGTAG+TGG | - | Chr7:37698923-37698942 | None:intergenic | 55.0% | |
| AGCAGCAGTAGCAGTGGTAG+TGG | - | Chr7:37697835-37697854 | None:intergenic | 55.0% | |
| CCATCTGCAGCAGAGGACAA+TGG | + | Chr7:37698256-37698275 | MsG0780037984.01.T01:CDS | 55.0% | |
| CCATTGTCCTCTGCTGCAGA+TGG | - | Chr7:37698259-37698278 | None:intergenic | 55.0% | |
| CGCAGGATAGAACACTTCCC+TGG | + | Chr7:37699233-37699252 | MsG0780037984.01.T01:CDS | 55.0% | |
| CTCGATTTCGTCGTGGTGTG+AGG | - | Chr7:37698792-37698811 | None:intergenic | 55.0% | |
| GCTTCTACCGATAGCACCAC+CGG | + | Chr7:37697498-37697517 | MsG0780037984.01.T01:CDS | 55.0% | |
| GGTGCAGAGGATTCCTGGTA+GGG | + | Chr7:37699330-37699349 | MsG0780037984.01.T01:CDS | 55.0% | |
| GTGCAGAGGATTCCTGGTAG+GGG | + | Chr7:37699331-37699350 | MsG0780037984.01.T01:CDS | 55.0% | |
| TCATCTGAAGGACATCCGGG+TGG | - | Chr7:37699156-37699175 | None:intergenic | 55.0% | |
| TCCACATGGAATCCCCTACC+AGG | - | Chr7:37699346-37699365 | None:intergenic | 55.0% | |
| TCCTGGTAGGGGATTCCATG+TGG | + | Chr7:37699342-37699361 | MsG0780037984.01.T01:CDS | 55.0% | |
| TGGTGCAGAGGATTCCTGGT+AGG | + | Chr7:37699329-37699348 | MsG0780037984.01.T01:CDS | 55.0% | |
| TTCCTCACCATCTGCAGCAG+AGG | + | Chr7:37698249-37698268 | MsG0780037984.01.T01:CDS | 55.0% | |
| ! | AGAGTCGCAGGCAGAGTGTT+TGG | + | Chr7:37699309-37699328 | MsG0780037984.01.T01:CDS | 55.0% |
| !! | AGGCAGAGTGTTTGGTGCAG+AGG | + | Chr7:37699317-37699336 | MsG0780037984.01.T01:CDS | 55.0% |
| GGAACACGCGCACGGGATAT+TGG | + | Chr7:37698403-37698422 | MsG0780037984.01.T01:CDS | 60.0% | |
| GGTAATCCGGAACACGCGCA+CGG | + | Chr7:37698395-37698414 | MsG0780037984.01.T01:CDS | 60.0% | |
| GTAATCCGGAACACGCGCAC+GGG | + | Chr7:37698396-37698415 | MsG0780037984.01.T01:CDS | 60.0% | |
| GTCCTCTGCTGCAGATGGTG+AGG | - | Chr7:37698254-37698273 | None:intergenic | 60.0% | |
| GTGCGCGTGTTCCGGATTAC+CGG | - | Chr7:37698396-37698415 | None:intergenic | 60.0% | |
| TCGCAATCGCGTAGTGGCTG+CGG | - | Chr7:37698917-37698936 | None:intergenic | 60.0% | |
| TCTTCCTCACACGGTAGCGC+CGG | + | Chr7:37697468-37697487 | MsG0780037984.01.T01:CDS | 60.0% | |
| ! | CGGTGGCGGCGAAGATGTAT+CGG | + | Chr7:37698310-37698329 | MsG0780037984.01.T01:CDS | 60.0% |
| ! | GTTTTTGTTGGCCGCAGCGC+CGG | - | Chr7:37697520-37697539 | None:intergenic | 60.0% |
| ACGCGCACGGGATATTGGCG+CGG | + | Chr7:37698408-37698427 | MsG0780037984.01.T01:CDS | 65.0% | |
| ATGGGGAACCCTGGAAGCGG+TGG | + | Chr7:37698293-37698312 | MsG0780037984.01.T01:CDS | 65.0% | |
| TTTGGGCCGTTTGCGCTCGC+AGG | + | Chr7:37699216-37699235 | MsG0780037984.01.T01:CDS | 65.0% | |
| !! | ATCGGTAGAAGCGCCGCCTC+CGG | - | Chr7:37697490-37697509 | None:intergenic | 65.0% |
| CGATAGCACCACCGGCGCTG+CGG | + | Chr7:37697506-37697525 | MsG0780037984.01.T01:CDS | 70.0% | |
| CTTCGCCGCCACCGCTTCCA+GGG | - | Chr7:37698304-37698323 | None:intergenic | 70.0% | |
| GGGAACCCTGGAAGCGGTGG+CGG | + | Chr7:37698296-37698315 | MsG0780037984.01.T01:CDS | 70.0% | |
| TCTTCGCCGCCACCGCTTCC+AGG | - | Chr7:37698305-37698324 | None:intergenic | 70.0% | |
| ! | TCACACGGTAGCGCCGGAGG+CGG | + | Chr7:37697474-37697493 | MsG0780037984.01.T01:CDS | 70.0% |
| ! | TCCTCACACGGTAGCGCCGG+AGG | + | Chr7:37697471-37697490 | MsG0780037984.01.T01:CDS | 70.0% |
| ! | TTTGTTGGCCGCAGCGCCGG+TGG | - | Chr7:37697517-37697536 | None:intergenic | 70.0% |
| !! | CGCAGCGCCGGTGGTGCTAT+CGG | - | Chr7:37697508-37697527 | None:intergenic | 70.0% |
| GCCTCCGGCGCTACCGTGTG+AGG | - | Chr7:37697475-37697494 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 37697246 | 37699438 | 37697246 | ID=MsG0780037984.01;Name=MsG0780037984.01 |
| Chr7 | mRNA | 37697246 | 37699438 | 37697246 | ID=MsG0780037984.01.T01;Parent=MsG0780037984.01;Name=MsG0780037984.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|730 |
| Chr7 | exon | 37697246 | 37699438 | 37697246 | ID=MsG0780037984.01.T01:exon:5652;Parent=MsG0780037984.01.T01 |
| Chr7 | CDS | 37697246 | 37699438 | 37697246 | ID=MsG0780037984.01.T01:cds;Parent=MsG0780037984.01.T01 |
| Gene Sequence |
| Protein sequence |
