AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038286.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038286.01.T02 MTR_7g063280 66.019 103 35 0 15 117 72 174 8.70e-47 149
MsG0780038286.01.T02 MTR_5g049680 75.824 91 21 1 1 90 17 107 2.04e-46 145
MsG0780038286.01.T02 MTR_6g016265 58.416 101 42 0 1 101 25 125 1.19e-38 126
MsG0780038286.01.T02 MTR_0015s0120 69.318 88 27 0 1 88 279 366 1.96e-36 127
MsG0780038286.01.T02 MTR_1g081930 52.427 103 49 0 1 103 24 126 3.55e-32 110
MsG0780038286.01.T02 MTR_1g088650 50.847 118 58 0 1 118 72 189 3.13e-31 109
MsG0780038286.01.T02 MTR_1g074090 63.291 79 29 0 3 81 69 147 3.60e-31 108
MsG0780038286.01.T02 MTR_2g047100 49.123 114 43 1 1 114 4 102 1.34e-27 98.2
MsG0780038286.01.T02 MTR_5g075610 51.000 100 47 1 21 120 1 98 5.68e-27 96.3
MsG0780038286.01.T02 MTR_3g116210 48.958 96 49 0 3 98 85 180 6.14e-27 99.0
MsG0780038286.01.T02 MTR_6g089560 42.718 103 59 0 1 103 102 204 7.17e-26 97.4
MsG0780038286.01.T02 MTR_1g045560 49.505 101 35 2 21 121 1 85 1.08e-25 92.8
MsG0780038286.01.T02 MTR_8g031800 48.454 97 49 1 1 97 17 112 2.57e-25 92.4
MsG0780038286.01.T02 MTR_6g453270 50.538 93 46 0 1 93 286 378 5.07e-25 97.8
MsG0780038286.01.T02 MTR_1g069475 48.936 94 48 0 1 94 150 243 1.31e-24 94.4
MsG0780038286.01.T02 MTR_7g053400 71.930 57 16 0 19 75 179 235 1.82e-24 94.0
MsG0780038286.01.T02 MTR_1g034430 44.554 101 56 0 1 101 81 181 3.69e-24 91.7
MsG0780038286.01.T02 MTR_5g083200 45.714 105 55 1 1 105 84 186 4.16e-24 92.0
MsG0780038286.01.T02 MTR_0002s1220 45.714 105 55 1 1 105 84 186 4.16e-24 92.0
MsG0780038286.01.T02 MTR_1g017840 43.878 98 55 0 1 98 64 161 4.38e-24 90.9
MsG0780038286.01.T02 MTR_1g045340 45.714 105 55 1 1 105 70 172 9.02e-24 90.5
MsG0780038286.01.T02 MTR_8g036780 48.000 100 45 2 1 100 20 112 1.86e-23 87.8
MsG0780038286.01.T02 MTR_2g027020 43.443 122 63 3 1 121 14 130 3.03e-23 89.4
MsG0780038286.01.T02 MTR_8g098925 45.745 94 51 0 19 112 69 162 3.19e-23 88.6
MsG0780038286.01.T02 MTR_3g465840 61.765 68 26 0 43 110 3 70 3.93e-23 88.2
MsG0780038286.01.T02 MTR_3g111390 43.810 105 57 1 1 105 84 186 7.62e-23 88.6
MsG0780038286.01.T02 MTR_1g070820 43.810 105 57 1 1 105 84 186 7.62e-23 88.6
MsG0780038286.01.T02 MTR_7g013520 45.652 92 50 0 1 92 56 147 4.06e-22 86.3
MsG0780038286.01.T02 MTR_4g029360 40.870 115 68 0 1 115 113 227 5.84e-22 87.0
MsG0780038286.01.T02 MTR_5g036320 53.165 79 37 0 1 79 65 143 6.80e-22 84.7
MsG0780038286.01.T02 MTR_1g050488 52.500 80 38 0 1 80 84 163 3.35e-21 83.6
MsG0780038286.01.T02 MTR_8g038340 56.944 72 31 0 1 72 175 246 5.43e-21 84.7
MsG0780038286.01.T02 MTR_8g088220 50.000 74 37 0 25 98 4 77 6.29e-21 80.5
MsG0780038286.01.T02 MTR_5g034450 50.667 75 37 0 1 75 35 109 7.01e-21 81.3
MsG0780038286.01.T02 MTR_6g016135 63.333 60 22 0 19 78 383 442 2.07e-20 85.5
MsG0780038286.01.T02 MTR_8g099580 46.939 98 52 0 1 98 192 289 9.28e-20 82.4
MsG0780038286.01.T02 MTR_2g059470 46.341 82 44 0 17 98 2 83 1.40e-19 77.0
MsG0780038286.01.T02 MTR_0093s0070 46.250 80 43 0 18 97 126 205 1.86e-19 80.1
MsG0780038286.01.T02 MTR_8g079540 51.163 86 42 0 3 88 36 121 2.13e-19 77.8
MsG0780038286.01.T02 MTR_7g072030 64.815 54 19 0 35 88 69 122 3.22e-19 77.4
MsG0780038286.01.T02 MTR_5g069700 50.000 74 37 0 36 109 2 75 1.81e-18 73.9
MsG0780038286.01.T02 MTR_4g008270 42.857 84 48 0 15 98 10 93 3.13e-18 73.9
MsG0780038286.01.T02 MTR_3g026270 60.377 53 21 0 23 75 3 55 4.66e-18 72.8
MsG0780038286.01.T02 MTR_5g085210 42.857 98 56 0 1 98 105 202 7.52e-18 76.3
MsG0780038286.01.T02 MTR_8g022750 40.179 112 50 1 1 112 191 285 9.43e-18 77.0
MsG0780038286.01.T02 MTR_8g028785 40.496 121 48 1 1 121 268 364 1.09e-17 77.4
MsG0780038286.01.T02 MTR_6g034915 33.113 151 54 2 1 121 11 144 1.33e-17 74.3
MsG0780038286.01.T02 MTR_5g037920 36.975 119 73 2 1 118 84 201 3.54e-17 74.7
MsG0780038286.01.T02 MTR_1g109000 50.000 74 37 0 3 76 14 87 1.57e-16 69.3
MsG0780038286.01.T02 MTR_6g016355 41.096 73 43 0 3 75 104 176 5.27e-16 70.5
MsG0780038286.01.T02 MTR_1g087480 73.333 45 12 0 3 47 176 220 7.78e-16 70.9
MsG0780038286.01.T02 MTR_6g013970 41.892 74 43 0 23 96 107 180 8.52e-16 70.5
MsG0780038286.01.T02 MTR_1g099430 50.847 59 29 0 1 59 111 169 9.90e-16 70.1
MsG0780038286.01.T02 MTR_7g006380 36.364 121 50 1 1 121 52 145 1.18e-15 69.7
MsG0780038286.01.T02 MTR_4g036855 47.059 85 17 1 35 119 1 57 1.45e-15 67.0
MsG0780038286.01.T02 MTR_4g046027 59.649 57 23 0 1 57 113 169 1.68e-15 68.9
MsG0780038286.01.T02 MTR_8g031080 40.496 121 46 2 1 121 275 369 2.13e-15 71.2
MsG0780038286.01.T02 MTR_3g010950 35.537 121 48 2 1 121 12 102 5.31e-15 66.6
MsG0780038286.01.T02 MTR_2g017550 50.746 67 33 0 1 67 94 160 1.22e-14 66.6
MsG0780038286.01.T02 MTR_8g045330 50.847 59 29 0 3 61 85 143 2.83e-14 65.5
MsG0780038286.01.T02 MTR_5g091440 39.394 99 27 2 23 121 3 68 4.24e-14 64.3
MsG0780038286.01.T02 MTR_6g045427 33.981 103 40 1 1 103 159 233 6.36e-14 65.9
MsG0780038286.01.T02 MTR_4g094370 52.727 55 26 0 3 57 23 77 7.36e-14 62.4
MsG0780038286.01.T02 MTR_1g018300 41.000 100 53 1 1 100 49 142 8.20e-14 65.9
MsG0780038286.01.T02 MTR_3g462490 56.364 55 24 0 1 55 87 141 9.85e-14 66.6
MsG0780038286.01.T02 MTR_6g046670 50.000 68 34 0 1 68 109 176 1.20e-13 64.7
MsG0780038286.01.T02 MTR_8g059135 45.833 72 39 0 18 89 31 102 1.53e-13 62.8
MsG0780038286.01.T02 MTR_7g078610 49.091 55 28 0 3 57 39 93 1.80e-13 61.6
MsG0780038286.01.T02 MTR_1g074240 44.615 65 36 0 17 81 2 66 1.85e-13 61.2
MsG0780038286.01.T02 MTR_4g094272 51.613 62 29 1 1 62 80 140 5.18e-13 61.6
MsG0780038286.01.T02 MTR_6g033225 38.750 80 49 0 1 80 56 135 6.70e-13 61.2
MsG0780038286.01.T02 MTR_1g054905 53.448 58 27 0 1 58 87 144 1.18e-12 61.2
MsG0780038286.01.T02 MTR_5g068115 56.250 48 21 0 1 48 20 67 5.30e-12 57.4
MsG0780038286.01.T02 MTR_1g017820 51.923 52 25 0 33 84 18 69 6.00e-12 57.4
MsG0780038286.01.T02 MTR_1g022215 41.429 70 41 0 2 71 1 70 8.73e-12 57.4
MsG0780038286.01.T02 MTR_5g014420 60.465 43 17 0 52 94 72 114 2.33e-11 57.0
MsG0780038286.01.T02 MTR_3g064060 70.588 34 10 0 3 36 25 58 6.35e-11 54.3
MsG0780038286.01.T01 MTR_5g049680 76.042 96 22 1 1 95 12 107 4.22e-50 155
MsG0780038286.01.T01 MTR_7g063280 66.019 103 35 0 20 122 72 174 1.22e-46 149
MsG0780038286.01.T01 MTR_6g016265 58.491 106 44 0 1 106 20 125 3.48e-41 133
MsG0780038286.01.T01 MTR_0015s0120 70.000 90 27 0 4 93 277 366 3.89e-38 132
MsG0780038286.01.T01 MTR_1g081930 53.704 108 50 0 1 108 19 126 2.51e-35 118
MsG0780038286.01.T01 MTR_1g074090 62.791 86 32 0 1 86 62 147 3.17e-34 116
MsG0780038286.01.T01 MTR_1g088650 50.407 123 61 0 1 123 67 189 2.65e-33 115
MsG0780038286.01.T01 MTR_3g116210 48.544 103 53 0 1 103 78 180 8.69e-30 106
MsG0780038286.01.T01 MTR_2g047100 49.565 115 43 1 5 119 3 102 1.36e-28 100
MsG0780038286.01.T01 MTR_6g089560 42.991 107 61 0 2 108 98 204 3.01e-28 103
MsG0780038286.01.T01 MTR_6g453270 51.020 98 48 0 1 98 281 378 1.06e-27 105
MsG0780038286.01.T01 MTR_8g031800 48.515 101 51 1 2 102 13 112 1.13e-27 98.6
MsG0780038286.01.T01 MTR_1g017840 45.098 102 56 0 2 103 60 161 6.03e-27 98.2
MsG0780038286.01.T01 MTR_5g083200 46.364 110 57 1 1 110 79 186 6.36e-27 99.4
MsG0780038286.01.T01 MTR_0002s1220 46.364 110 57 1 1 110 79 186 6.36e-27 99.4
MsG0780038286.01.T01 MTR_5g075610 51.000 100 47 1 26 125 1 98 6.63e-27 96.3
MsG0780038286.01.T01 MTR_8g036780 49.524 105 46 2 1 105 15 112 8.56e-27 96.7
MsG0780038286.01.T01 MTR_1g045340 46.364 110 57 1 1 110 65 172 1.26e-26 98.2
MsG0780038286.01.T01 MTR_1g069475 48.485 99 51 0 1 99 145 243 6.88e-26 97.8
MsG0780038286.01.T01 MTR_3g111390 44.545 110 59 1 1 110 79 186 1.24e-25 95.9
MsG0780038286.01.T01 MTR_1g070820 44.545 110 59 1 1 110 79 186 1.24e-25 95.9
MsG0780038286.01.T01 MTR_1g045560 49.505 101 35 2 26 126 1 85 1.54e-25 92.8
MsG0780038286.01.T01 MTR_8g098925 41.026 117 55 1 1 117 60 162 5.44e-25 93.2
MsG0780038286.01.T01 MTR_1g034430 43.396 106 60 0 1 106 76 181 9.12e-25 93.2
MsG0780038286.01.T01 MTR_5g036320 53.571 84 39 0 1 84 60 143 9.93e-25 92.0
MsG0780038286.01.T01 MTR_7g053400 71.930 57 16 0 24 80 179 235 2.69e-24 94.0
MsG0780038286.01.T01 MTR_2g027020 43.902 123 63 3 5 126 13 130 2.73e-24 92.4
MsG0780038286.01.T01 MTR_4g029360 40.833 120 71 0 1 120 108 227 8.11e-24 92.0
MsG0780038286.01.T01 MTR_7g013520 45.361 97 53 0 1 97 51 147 9.34e-24 90.9
MsG0780038286.01.T01 MTR_8g038340 57.143 77 33 0 1 77 170 246 1.89e-23 91.7
MsG0780038286.01.T01 MTR_3g465840 61.765 68 26 0 48 115 3 70 4.48e-23 88.2
MsG0780038286.01.T01 MTR_8g099580 47.059 102 54 0 2 103 188 289 2.11e-22 89.7
MsG0780038286.01.T01 MTR_1g050488 50.588 85 42 0 1 85 79 163 2.84e-22 86.7
MsG0780038286.01.T01 MTR_5g034450 50.000 78 39 0 3 80 32 109 7.54e-22 84.0
MsG0780038286.01.T01 MTR_8g088220 50.000 74 37 0 30 103 4 77 8.03e-21 80.5
MsG0780038286.01.T01 MTR_8g022750 41.026 117 52 1 1 117 186 285 9.82e-21 85.1
MsG0780038286.01.T01 MTR_6g016135 63.333 60 22 0 24 83 383 442 2.44e-20 85.5
MsG0780038286.01.T01 MTR_8g028785 42.276 123 47 1 1 123 263 361 3.69e-20 84.3
MsG0780038286.01.T01 MTR_5g037920 37.097 124 76 2 1 123 79 201 3.73e-20 82.4
MsG0780038286.01.T01 MTR_8g079540 48.387 93 48 0 1 93 29 121 4.44e-20 79.7
MsG0780038286.01.T01 MTR_5g085210 42.718 103 59 0 1 103 100 202 8.67e-20 81.6
MsG0780038286.01.T01 MTR_2g059470 46.341 82 44 0 22 103 2 83 1.51e-19 77.0
MsG0780038286.01.T01 MTR_0093s0070 46.250 80 43 0 23 102 126 205 1.84e-19 80.1
MsG0780038286.01.T01 MTR_7g072030 64.815 54 19 0 40 93 69 122 4.47e-19 77.0
MsG0780038286.01.T01 MTR_6g034915 33.117 154 56 2 3 126 8 144 1.56e-18 77.0
MsG0780038286.01.T01 MTR_4g046027 59.677 62 25 0 1 62 108 169 1.61e-18 77.0
MsG0780038286.01.T01 MTR_5g069700 50.000 74 37 0 41 114 2 75 1.99e-18 74.3
MsG0780038286.01.T01 MTR_4g008270 42.857 84 48 0 20 103 10 93 2.84e-18 74.3
MsG0780038286.01.T01 MTR_3g026270 60.377 53 21 0 28 80 3 55 6.88e-18 72.4
MsG0780038286.01.T01 MTR_3g010950 37.302 126 49 2 1 126 7 102 6.97e-18 74.3
MsG0780038286.01.T01 MTR_1g109000 48.148 81 42 0 1 81 7 87 1.26e-17 72.4
MsG0780038286.01.T01 MTR_8g031080 41.270 126 48 2 1 126 270 369 4.01e-17 76.3
MsG0780038286.01.T01 MTR_2g017550 52.113 71 34 0 2 72 90 160 4.83e-17 72.8
MsG0780038286.01.T01 MTR_6g045427 36.111 108 41 1 1 108 154 233 5.84e-17 74.3
MsG0780038286.01.T01 MTR_1g099430 50.000 64 32 0 1 64 106 169 6.08e-17 73.6
MsG0780038286.01.T01 MTR_1g087480 69.231 52 16 0 1 52 169 220 1.27e-16 73.2
MsG0780038286.01.T01 MTR_7g078610 48.387 62 32 0 1 62 32 93 1.58e-16 69.7
MsG0780038286.01.T01 MTR_7g006380 36.885 122 50 1 5 126 51 145 1.60e-16 72.0
MsG0780038286.01.T01 MTR_8g045330 50.000 66 33 0 1 66 78 143 2.40e-16 70.9
MsG0780038286.01.T01 MTR_3g462490 56.667 60 26 0 1 60 82 141 3.64e-16 73.6
MsG0780038286.01.T01 MTR_1g018300 40.952 105 56 1 1 105 44 142 6.10e-16 71.6
MsG0780038286.01.T01 MTR_6g016355 41.096 73 43 0 8 80 104 176 6.52e-16 70.5
MsG0780038286.01.T01 MTR_6g013970 41.892 74 43 0 28 101 107 180 1.44e-15 70.1
MsG0780038286.01.T01 MTR_4g036855 45.977 87 19 1 40 126 1 59 1.89e-15 67.0
MsG0780038286.01.T01 MTR_6g046670 50.000 72 36 0 2 73 105 176 3.39e-15 68.9
MsG0780038286.01.T01 MTR_1g054905 53.226 62 29 0 2 63 83 144 5.18e-15 67.8
MsG0780038286.01.T01 MTR_4g094272 50.746 67 32 1 1 67 75 140 1.92e-14 65.5
MsG0780038286.01.T01 MTR_6g033225 39.024 82 50 0 4 85 54 135 3.17e-14 65.1
MsG0780038286.01.T01 MTR_5g091440 39.394 99 27 2 28 126 3 68 5.55e-14 64.3
MsG0780038286.01.T01 MTR_5g068115 56.604 53 23 0 1 53 15 67 7.22e-14 62.4
MsG0780038286.01.T01 MTR_4g094370 52.727 55 26 0 8 62 23 77 8.46e-14 62.4
MsG0780038286.01.T01 MTR_8g059135 41.176 85 49 1 10 94 19 102 1.72e-13 62.8
MsG0780038286.01.T01 MTR_1g074240 44.615 65 36 0 22 86 2 66 2.20e-13 61.2
MsG0780038286.01.T01 MTR_3g064060 65.854 41 14 0 1 41 18 58 2.44e-13 60.5
MsG0780038286.01.T01 MTR_4g035890 53.704 54 25 0 1 54 95 148 3.54e-13 62.4
MsG0780038286.01.T01 MTR_5g430460 52.941 51 24 0 1 51 199 249 2.18e-12 62.0
MsG0780038286.01.T01 MTR_1g017820 51.923 52 25 0 38 89 18 69 5.82e-12 57.4
MsG0780038286.01.T01 MTR_1g022215 41.429 70 41 0 7 76 1 70 1.11e-11 57.4
MsG0780038286.01.T01 MTR_5g014420 60.465 43 17 0 57 99 72 114 2.69e-11 57.0
MsG0780038286.01.T01 MTR_4g046657 60.465 43 16 1 1 42 20 62 8.92e-11 54.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 24 sgRNAs with CRISPR-Local

Find 26 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACATGATGCTACTGAATT+TGG 0.201578 7:-43514067 MsG0780038286.01.T01:CDS
AATCGATTGGGCCAAAATTA+AGG 0.267842 7:+43514134 None:intergenic
TGGGTCCATGTCCTTAATTT+TGG 0.273516 7:-43514145 MsG0780038286.01.T01:CDS
GGGACTAATCCACTCAGTTT+TGG 0.341211 7:+43514219 None:intergenic
ACAATTGTAGAACTTTGTTT+AGG 0.350292 7:-43514033 MsG0780038286.01.T01:CDS
ACTCTAGTGTAGAGTTTGTT+AGG 0.353260 7:-43513997 MsG0780038286.01.T01:CDS
TTCAGTAGCATCATGTTTAG+TGG 0.367518 7:+43514072 None:intergenic
TCTCGATTTATTATCTGCAT+TGG 0.427027 7:-43514170 MsG0780038286.01.T01:CDS
TTTATTATCTGCATTGGAAT+GGG 0.431018 7:-43514164 MsG0780038286.01.T01:CDS
ATTTATTATCTGCATTGGAA+TGG 0.454088 7:-43514165 MsG0780038286.01.T01:CDS
CCCTTGAGAGAAGTTTATAT+AGG 0.466642 7:-43514199 MsG0780038286.01.T01:CDS
ATTGCACTTACAACGACCTT+CGG 0.482110 7:+43514324 None:intergenic
TCCAACTGTCTGAATAGAGT+TGG 0.486743 7:-43514286 MsG0780038286.01.T01:CDS
GTATCAAGCTCAAAATCGAT+TGG 0.494359 7:+43514121 None:intergenic
TCCAACTCTATTCAGACAGT+TGG 0.494679 7:+43514285 None:intergenic
TCCTATATAAACTTCTCTCA+AGG 0.496039 7:+43514198 None:intergenic
TGTCTGAATAGAGTTGGAAT+AGG 0.506813 7:-43514280 MsG0780038286.01.T01:CDS
TATCAAGCTCAAAATCGATT+GGG 0.515283 7:+43514122 None:intergenic
TGTTAGGAGACAAGCAAATG+AGG 0.541832 7:-43513981 MsG0780038286.01.T01:CDS
CACTTACAACGACCTTCGGA+TGG 0.553521 7:+43514328 None:intergenic
CCTATATAAACTTCTCTCAA+GGG 0.598227 7:+43514199 None:intergenic
TTGGGCCAAAATTAAGGACA+TGG 0.608636 7:+43514140 None:intergenic
TTGTGCTTGCCAAAACTGAG+TGG 0.638339 7:-43514228 MsG0780038286.01.T01:CDS
ACTTGAATAAAACCATCCGA+AGG 0.668654 7:-43514340 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATTTATTATCTGCATTGGAA+TGG - Chr7:43514133-43514152 MsG0780038286.01.T01:CDS 25.0%
! TTTATTATCTGCATTGGAAT+GGG - Chr7:43514134-43514153 MsG0780038286.01.T01:CDS 25.0%
!! ACAATTGTAGAACTTTGTTT+AGG - Chr7:43514265-43514284 MsG0780038286.01.T01:CDS 25.0%
!! ATTTTGAGCTTGATACAAAA+AGG - Chr7:43514184-43514203 MsG0780038286.01.T01:CDS 25.0%
!! TTTTGAGCTTGATACAAAAA+GGG - Chr7:43514185-43514204 MsG0780038286.01.T01:CDS 25.0%
AAACATGATGCTACTGAATT+TGG - Chr7:43514231-43514250 MsG0780038286.01.T01:CDS 30.0%
CCTATATAAACTTCTCTCAA+GGG + Chr7:43514102-43514121 None:intergenic 30.0%
TATCAAGCTCAAAATCGATT+GGG + Chr7:43514179-43514198 None:intergenic 30.0%
TCCTATATAAACTTCTCTCA+AGG + Chr7:43514103-43514122 None:intergenic 30.0%
TCTCGATTTATTATCTGCAT+TGG - Chr7:43514128-43514147 MsG0780038286.01.T01:CDS 30.0%
TTTGAGCTTGATACAAAAAG+GGG - Chr7:43514186-43514205 MsG0780038286.01.T01:CDS 30.0%
AATCGATTGGGCCAAAATTA+AGG + Chr7:43514167-43514186 None:intergenic 35.0%
CCCTTGAGAGAAGTTTATAT+AGG - Chr7:43514099-43514118 MsG0780038286.01.T01:CDS 35.0%
GTATCAAGCTCAAAATCGAT+TGG + Chr7:43514180-43514199 None:intergenic 35.0%
TGTCTGAATAGAGTTGGAAT+AGG - Chr7:43514018-43514037 MsG0780038286.01.T01:CDS 35.0%
TTCAGTAGCATCATGTTTAG+TGG + Chr7:43514229-43514248 None:intergenic 35.0%
! ACTCTAGTGTAGAGTTTGTT+AGG - Chr7:43514301-43514320 MsG0780038286.01.T01:CDS 35.0%
ATTGCACTTACAACGACCTT+CGG + Chr7:43513977-43513996 None:intergenic 40.0%
TCCAACTCTATTCAGACAGT+TGG + Chr7:43514016-43514035 None:intergenic 40.0%
TCCAACTGTCTGAATAGAGT+TGG - Chr7:43514012-43514031 MsG0780038286.01.T01:CDS 40.0%
TGTTAGGAGACAAGCAAATG+AGG - Chr7:43514317-43514336 MsG0780038286.01.T01:CDS 40.0%
TTGGGCCAAAATTAAGGACA+TGG + Chr7:43514161-43514180 None:intergenic 40.0%
! TGGGTCCATGTCCTTAATTT+TGG - Chr7:43514153-43514172 MsG0780038286.01.T01:CDS 40.0%
TTGTGCTTGCCAAAACTGAG+TGG - Chr7:43514070-43514089 MsG0780038286.01.T01:CDS 45.0%
! GGGACTAATCCACTCAGTTT+TGG + Chr7:43514082-43514101 None:intergenic 45.0%
CACTTACAACGACCTTCGGA+TGG + Chr7:43513973-43513992 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
Chr7 gene 43513967 43514353 43513967 ID=MsG0780038286.01;Name=MsG0780038286.01
Chr7 mRNA 43513967 43514353 43513967 ID=MsG0780038286.01.T01;Parent=MsG0780038286.01;Name=MsG0780038286.01.T01;_AED=0.24;_eAED=0.25;_QI=0|-1|0|1|-1|0|1|0|128
Chr7 exon 43513967 43514353 43513967 ID=MsG0780038286.01.T01:exon:8501;Parent=MsG0780038286.01.T01
Chr7 CDS 43513967 43514353 43513967 ID=MsG0780038286.01.T01:cds;Parent=MsG0780038286.01.T01
Chr7 mRNA 43513967 43514338 43513967 ID=MsG0780038286.01.T02;Parent=MsG0780038286.01;Name=MsG0780038286.01.T02;_AED=0.25;_eAED=0.26;_QI=0|-1|0|1|-1|0|1|0|123
Chr7 exon 43513967 43514338 43513967 ID=MsG0780038286.01.T02:exon:8502;Parent=MsG0780038286.01.T02
Chr7 CDS 43513967 43514338 43513967 ID=MsG0780038286.01.T02:cds;Parent=MsG0780038286.01.T02
Gene Sequence

>MsG0780038286.01.T02

CGTTGTAAGTGCAATATTGATGCATCTTTTTCCAACTGTCTGAATAGAGTTGGAATAGGCGTTTGTATTAGAGAAGATACAAGATCTTTTGTGCTTGCCAAAACTGAGTGGATTAGTCCCTTGAGAGAAGTTTATATAGGAGAAGCTCTCGATTTATTATCTGCATTGGAATGGGTCCATGTCCTTAATTTTGGCCCAATCGATTTTGAGCTTGATACAAAAAGGGGTGTTGATAGTTTTTTATCCACTAAACATGATGCTACTGAATTTGGCAATATCATTCACAATTGTAGAACTTTGTTTAGGTCTTGCTATGTAAACTCTAGTGTAGAGTTTGTTAGGAGACAAGCAAATGAGGCTGCTATGAGTTAG

>MsG0780038286.01.T01

AAACCATCCGAAGGTCGTTGTAAGTGCAATATTGATGCATCTTTTTCCAACTGTCTGAATAGAGTTGGAATAGGCGTTTGTATTAGAGAAGATACAAGATCTTTTGTGCTTGCCAAAACTGAGTGGATTAGTCCCTTGAGAGAAGTTTATATAGGAGAAGCTCTCGATTTATTATCTGCATTGGAATGGGTCCATGTCCTTAATTTTGGCCCAATCGATTTTGAGCTTGATACAAAAAGGGGTGTTGATAGTTTTTTATCCACTAAACATGATGCTACTGAATTTGGCAATATCATTCACAATTGTAGAACTTTGTTTAGGTCTTGCTATGTAAACTCTAGTGTAGAGTTTGTTAGGAGACAAGCAAATGAGGCTGCTATGAGTTAG
Protein sequence

>MsG0780038286.01.T02

RCKCNIDASFSNCLNRVGIGVCIREDTRSFVLAKTEWISPLREVYIGEALDLLSALEWVHVLNFGPIDFELDTKRGVDSFLSTKHDATEFGNIIHNCRTLFRSCYVNSSVEFVRRQANEAAMS*

>MsG0780038286.01.T01

KPSEGRCKCNIDASFSNCLNRVGIGVCIREDTRSFVLAKTEWISPLREVYIGEALDLLSALEWVHVLNFGPIDFELDTKRGVDSFLSTKHDATEFGNIIHNCRTLFRSCYVNSSVEFVRRQANEAAMS*