AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038494.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038494.01.T01 MTR_7g056407 90.588 340 28 3 99 435 1 339 7.18e-177 498
MsG0780038494.01.T01 MTR_3g065180 71.758 347 81 10 99 435 1 340 8.93e-147 421
MsG0780038494.01.T01 MTR_8g013650 71.698 53 15 0 383 435 182 234 3.47e-24 100
MsG0780038494.01.T01 MTR_4g132760 43.411 129 41 3 315 435 113 217 9.23e-23 96.3
MsG0780038494.01.T01 MTR_6g023775 90.909 44 4 0 1 44 119 162 3.02e-20 87.8
MsG0780038494.01.T01 MTR_5g079130 78.431 51 11 0 1 51 33 83 7.08e-20 84.7
MsG0780038494.01.T01 MTR_1g019730 79.545 44 9 0 1 44 37 80 1.23e-16 75.1
MsG0780038494.01.T01 MTR_1g057450 85.714 42 6 0 1 42 33 74 3.76e-16 73.6
MsG0780038494.01.T01 MTR_6g465000 80.435 46 9 0 3 48 23 68 8.34e-16 72.4
MsG0780038494.01.T01 MTR_7g031710 73.333 45 12 0 4 48 32 76 3.16e-13 65.1
MsG0780038494.01.T01 MTR_7g069410 68.293 41 13 0 8 48 67 107 9.67e-12 62.0
MsG0780038494.01.T01 MTR_2g019040 85.714 35 5 0 10 44 206 240 7.66e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038494.01.T01 AT3G07120 36.141 368 186 11 104 435 6 360 3.82e-53 182
MsG0780038494.01.T01 AT3G25030 46.512 129 45 3 307 435 146 250 9.24e-28 111
MsG0780038494.01.T01 AT3G25030 37.363 91 51 3 112 198 28 116 8.57e-11 62.4
MsG0780038494.01.T01 AT3G25030 46.512 129 45 3 307 435 146 250 9.24e-28 111
MsG0780038494.01.T01 AT3G25030 37.363 91 51 3 112 198 28 116 8.57e-11 62.4
MsG0780038494.01.T01 AT3G25030 46.512 129 45 3 307 435 146 250 9.24e-28 111
MsG0780038494.01.T01 AT3G25030 37.363 91 51 3 112 198 28 116 8.57e-11 62.4
MsG0780038494.01.T01 AT3G25030 46.512 129 45 3 307 435 106 210 9.54e-28 109
MsG0780038494.01.T01 AT4G13100 52.336 107 36 4 336 435 158 256 6.08e-26 106
MsG0780038494.01.T01 AT4G13100 52.336 107 36 4 336 435 158 256 6.08e-26 106
MsG0780038494.01.T01 AT4G13100 52.336 107 36 4 336 435 158 256 6.32e-26 106
MsG0780038494.01.T01 AT4G13100 52.336 107 36 4 336 435 161 259 7.08e-26 106
MsG0780038494.01.T01 AT4G13100 52.336 107 36 4 336 435 161 259 7.08e-26 106
MsG0780038494.01.T01 AT4G13100 52.336 107 36 4 336 435 161 259 7.08e-26 106
MsG0780038494.01.T01 AT4G13100 52.336 107 36 4 336 435 161 259 7.08e-26 106
MsG0780038494.01.T01 AT4G13100 50.877 114 41 4 329 435 160 265 9.51e-26 105
MsG0780038494.01.T01 AT4G03965 43.119 109 53 3 328 435 109 209 4.06e-21 91.7
MsG0780038494.01.T01 AT4G22250 45.536 112 42 4 327 435 119 214 4.79e-20 88.6
MsG0780038494.01.T01 AT1G62370 55.102 49 22 0 387 435 156 204 2.56e-16 77.8

Find 116 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTTCTACTGTTAGGATTT+TGG 0.123677 7:+47665756 None:intergenic
GTCTACAAGCGTTCGATTCT+TGG 0.269402 7:+47667973 None:intergenic
GTTGGTCTCGTCTTCTTTGA+TGG 0.313588 7:+47667949 None:intergenic
GCAGCAGAGGTGGATGCTTC+AGG 0.335620 7:-47665338 MsG0780038494.01.T01:CDS
TGAGTTATCAGAGTTGTCTT+TGG 0.336919 7:-47670297 MsG0780038494.01.T01:CDS
TTGGGAGGTGATGGTTGGTT+AGG 0.342906 7:+47667992 None:intergenic
ACTTGCTGGAGGAGACTGAT+AGG 0.350211 7:-47665286 MsG0780038494.01.T01:CDS
AAGGGAGGCAGTGGCAGCGC+AGG 0.359534 7:-47665381 MsG0780038494.01.T01:CDS
GGCAGTGGCAGCGCAGGAGG+CGG 0.372743 7:-47665375 MsG0780038494.01.T01:CDS
ATGCCATTGCAAATGGTCTA+AGG 0.375335 7:+47669755 None:intergenic
TTGCGTCGTCGTGGTGAGTT+TGG 0.378272 7:+47665699 None:intergenic
AGAGACAGGGAGGGCACTTT+CGG 0.384237 7:-47665405 MsG0780038494.01.T01:CDS
GAGTCGAATCTTGTCCTTGA+AGG 0.385931 7:+47665838 None:intergenic
TACAAATAAACTTCCGAATC+CGG 0.397560 7:+47670269 None:intergenic
AGAAGCTGCTGCAGCAGCAG+AGG 0.398231 7:-47665351 MsG0780038494.01.T01:CDS
GTTTATTTGTATCTTGATGA+TGG 0.400781 7:-47670257 MsG0780038494.01.T01:CDS
TCTACAAGCGTTCGATTCTT+GGG 0.400963 7:+47667974 None:intergenic
TCCGTATTGTATCTCGTATC+CGG 0.402678 7:-47669823 MsG0780038494.01.T01:CDS
AGAGTTGTCTTTGGATGAAC+CGG 0.403942 7:-47670288 MsG0780038494.01.T01:CDS
CTTCCGATGGGTCAAGGTCT+TGG 0.405792 7:+47665651 None:intergenic
GACTGATAGGGAGATGGGAT+TGG 0.406569 7:-47665273 MsG0780038494.01.T01:CDS
GTCTTTGGATGAACCGGATT+CGG 0.406691 7:-47670282 MsG0780038494.01.T01:CDS
GATGTCACTAATGGACTTGC+TGG 0.407185 7:-47665300 MsG0780038494.01.T01:CDS
TCCAATGATGATGTCACTAA+TGG 0.408666 7:-47665309 MsG0780038494.01.T01:CDS
TGGATAGGAATATCTGAAGT+TGG 0.409983 7:+47665776 None:intergenic
GGAGGCAGTGGCAGCGCAGG+AGG 0.411392 7:-47665378 MsG0780038494.01.T01:CDS
TTCTTGTTGTCATCGTCGTC+GGG 0.411547 7:+47665431 None:intergenic
TTTCTTGTTGTCATCGTCGT+CGG 0.413016 7:+47665430 None:intergenic
AACCGTCGAGAGAAGTTTGC+TGG 0.413798 7:-47668067 MsG0780038494.01.T01:CDS
GGTCTTGGTGAGTCATGGAT+TGG 0.424285 7:+47665666 None:intergenic
AAGATCTTGGAAAGCCTTCA+AGG 0.430697 7:-47665852 MsG0780038494.01.T01:CDS
TCCATTAGTGACATCATCAT+TGG 0.437375 7:+47665308 None:intergenic
AGCTGCTGCAGCAGCAGAGG+TGG 0.440857 7:-47665348 MsG0780038494.01.T01:CDS
GAAAGTGCCCTCCCTGTCTC+TGG 0.444680 7:+47665407 None:intergenic
GATGTGTTCAAGGGAGCTTA+TGG 0.447756 7:-47665090 MsG0780038494.01.T01:CDS
TATGGAATGTGGGACATTAG+TGG 0.450536 7:-47670353 None:intergenic
CTTGTGGCCACAGTTTCTGC+AGG 0.450829 7:-47665112 MsG0780038494.01.T01:CDS
GGAGGTGATGGTTGGTTAGG+TGG 0.462666 7:+47667995 None:intergenic
GTTCGATTCTTGGGAGGTGA+TGG 0.465995 7:+47667983 None:intergenic
TTTCAACATGCCATTGCAAA+TGG 0.466478 7:+47669748 None:intergenic
CGTCGTGGTGAGTTTGGATT+CGG 0.472074 7:+47665705 None:intergenic
TCAAGCGCACTGGCTCTACT+TGG 0.473278 7:-47665817 MsG0780038494.01.T01:CDS
GTTTCTGCAGGATGTGTTCA+AGG 0.476417 7:-47665100 MsG0780038494.01.T01:CDS
ACTTTCGGCAAGGGAGGCAG+TGG 0.480490 7:-47665390 MsG0780038494.01.T01:CDS
AGGGAGGGCACTTTCGGCAA+GGG 0.484149 7:-47665399 MsG0780038494.01.T01:CDS
GACAACAAGAAACCAGAGAC+AGG 0.484218 7:-47665419 MsG0780038494.01.T01:CDS
TTTATTTGTATCTTGATGAT+GGG 0.488641 7:-47670256 MsG0780038494.01.T01:CDS
AAGGGAGCTTATGGTGGCTA+AGG 0.488894 7:-47665081 MsG0780038494.01.T01:CDS
GGAGCATTGGACTCTTCCGA+TGG 0.498273 7:+47665638 None:intergenic
ATCGGAAGAGTCCAATGCTC+CGG 0.498401 7:-47665636 MsG0780038494.01.T01:CDS
GTCTTGGTGAGTCATGGATT+GGG 0.499816 7:+47665667 None:intergenic
TGGTCTAGTGGCCGGAGCAT+TGG 0.501053 7:+47665625 None:intergenic
TTGTATCTTGATGATGGGAA+TGG 0.512922 7:-47670251 MsG0780038494.01.T01:CDS
TATTTGCATGGTGAAGCATA+AGG 0.513921 7:-47665150 MsG0780038494.01.T01:CDS
GGAGGAGACTGATAGGGAGA+TGG 0.517088 7:-47665279 MsG0780038494.01.T01:CDS
GTGAACTGTGGTCTAGTGGC+CGG 0.520905 7:+47665617 None:intergenic
AGATGGGATTGGAAGGATCA+AGG 0.521559 7:-47665262 MsG0780038494.01.T01:CDS
CCAGAAAACTCCTCTGGCGG+AGG 0.528261 7:-47665560 MsG0780038494.01.T01:CDS
GTCAAGGTCTTGGTGAGTCA+TGG 0.528952 7:+47665661 None:intergenic
GAATTTCTTCGTGAGAGTTG+CGG 0.530210 7:+47665527 None:intergenic
GATTCTTGGGAGGTGATGGT+TGG 0.530882 7:+47667987 None:intergenic
GAATCACCAGAAAACTCCTC+TGG 0.532041 7:-47665566 MsG0780038494.01.T01:CDS
GAGGAGACTGATAGGGAGAT+GGG 0.534352 7:-47665278 MsG0780038494.01.T01:CDS
CAGGGAGGGCACTTTCGGCA+AGG 0.535913 7:-47665400 MsG0780038494.01.T01:CDS
AAGTGACATGCTATGAAGCC+CGG 0.541708 7:+47669804 None:intergenic
CCGTATTGTATCTCGTATCC+GGG 0.544736 7:-47669822 MsG0780038494.01.T01:CDS
TGGACTCTTCCGATGGGTCA+AGG 0.545771 7:+47665645 None:intergenic
GATGCGCATGAACCACTTGA+TGG 0.549175 7:-47670329 MsG0780038494.01.T01:CDS
GAATGTGAAGATGATGAGGA+TGG 0.549427 7:-47665200 MsG0780038494.01.T01:CDS
CGGCTCTGATGACACATTGG+TGG 0.553152 7:+47665505 None:intergenic
GAGGGCACTTTCGGCAAGGG+AGG 0.557626 7:-47665396 MsG0780038494.01.T01:CDS
AAGATTCGACTCAAGCGCAC+TGG 0.561156 7:-47665827 MsG0780038494.01.T01:CDS
CATGAACCACTTGATGGTGT+TGG 0.563340 7:-47670323 MsG0780038494.01.T01:CDS
ATTTGCATGGTGAAGCATAA+GGG 0.569184 7:-47665149 MsG0780038494.01.T01:CDS
GATAGGGAGATGGGATTGGA+AGG 0.574708 7:-47665269 MsG0780038494.01.T01:CDS
ACTACACGTCCTCGGTGAAA+CGG 0.574720 7:+47665485 None:intergenic
TCACCAAGACCTTGACCCAT+CGG 0.578350 7:-47665654 MsG0780038494.01.T01:CDS
GCAGAGGTGGATGCTTCAGG+AGG 0.578582 7:-47665335 MsG0780038494.01.T01:CDS
CTGCAGAAACTGTGGCCACA+AGG 0.579057 7:+47665113 None:intergenic
ATTAGTGACATCATCATTGG+AGG 0.583297 7:+47665311 None:intergenic
CTTGCTGGAGGAGACTGATA+GGG 0.588347 7:-47665285 MsG0780038494.01.T01:CDS
TTTCTGCAGGATGTGTTCAA+GGG 0.591914 7:-47665099 MsG0780038494.01.T01:CDS
TAAAAGTCACTACACGTCCT+CGG 0.592014 7:+47665477 None:intergenic
AATACAACAAGTCTCTTCCA+TGG 0.592393 7:+47665169 None:intergenic
CAGAGAGACGTGTGGACATG+CGG 0.594260 7:+47665591 None:intergenic
CCCGGATACGAGATACAATA+CGG 0.597285 7:+47669822 None:intergenic
AGGGAGCTTATGGTGGCTAA+GGG 0.598389 7:-47665080 MsG0780038494.01.T01:CDS
AGAGACTTGTTGTATTTGCA+TGG 0.599875 7:-47665162 MsG0780038494.01.T01:CDS
TGATGATGGGAATGGAGGAG+AGG 0.601279 7:-47670243 MsG0780038494.01.T01:CDS
TTCTTCGTGAGAGTTGCGGC+CGG 0.611845 7:+47665531 None:intergenic
CCGGAGATTTCCTCCGCCAG+AGG 0.617384 7:+47665550 None:intergenic
AACACATCCTGCAGAAACTG+TGG 0.617945 7:+47665105 None:intergenic
GAGCATTGGACTCTTCCGAT+GGG 0.617970 7:+47665639 None:intergenic
CAAGAAACCAGAGACAGGGA+GGG 0.618736 7:-47665414 MsG0780038494.01.T01:CDS
TATCTTGATGATGGGAATGG+AGG 0.618869 7:-47670248 MsG0780038494.01.T01:CDS
AGCCAGCAAACTTCTCTCGA+CGG 0.619798 7:+47668065 None:intergenic
GCGAGTGAACTGTGGTCTAG+TGG 0.621980 7:+47665613 None:intergenic
ACAAGAAACCAGAGACAGGG+AGG 0.622066 7:-47665415 MsG0780038494.01.T01:CDS
TCAATTCCAACACCATCAAG+TGG 0.625153 7:+47670317 None:intergenic
TGAGGATGGAGAAGGTGCCA+TGG 0.630424 7:-47665186 MsG0780038494.01.T01:CDS
GTCACTAATGGACTTGCTGG+AGG 0.632385 7:-47665297 MsG0780038494.01.T01:CDS
TCACCTTAGACCATTTGCAA+TGG 0.633419 7:-47669758 MsG0780038494.01.T01:CDS
CCTCTGGCGGAGGAAATCTC+CGG 0.633622 7:-47665550 MsG0780038494.01.T01:CDS
CAGAGGTGGATGCTTCAGGA+GGG 0.637047 7:-47665334 MsG0780038494.01.T01:CDS
TCACCAGAAAACTCCTCTGG+CGG 0.638652 7:-47665563 MsG0780038494.01.T01:CDS
GTGTTCAAGGGAGCTTATGG+TGG 0.648316 7:-47665087 MsG0780038494.01.T01:CDS
TGAAGAATGTGAAGATGATG+AGG 0.655551 7:-47665204 MsG0780038494.01.T01:CDS
ACAAGCGTTCGATTCTTGGG+AGG 0.661109 7:+47667977 None:intergenic
GACATGCGGCGAGTGAACTG+TGG 0.665014 7:+47665605 None:intergenic
AAACGGCTCTGATGACACAT+TGG 0.665091 7:+47665502 None:intergenic
ACAATGAAATTGTTGCAGAG+TGG 0.671764 7:+47665050 None:intergenic
ACAACAAGAAACCAGAGACA+GGG 0.675922 7:-47665418 MsG0780038494.01.T01:CDS
GAAGATGATGAGGATGGAGA+AGG 0.686833 7:-47665194 MsG0780038494.01.T01:CDS
TGATTCGACAGAGAGACGTG+TGG 0.688510 7:+47665583 None:intergenic
TTGACATGTTTGCGTCGTCG+TGG 0.691290 7:+47665690 None:intergenic
TCATCAGAGCCGTTTCACCG+AGG 0.765959 7:-47665494 MsG0780038494.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAATTATTTTAAATTTTTA+AGG - Chr7:47666580-47666599 MsG0780038494.01.T01:intron 0.0%
!!! ATTTTAATTTTTTTAATAAT+TGG - Chr7:47665904-47665923 MsG0780038494.01.T01:intron 0.0%
!! AAAGAAAAAATCAATTATTT+AGG - Chr7:47668478-47668497 MsG0780038494.01.T01:intron 10.0%
!! AAGAAAAAAAAATTACATAA+AGG + Chr7:47667190-47667209 None:intergenic 10.0%
!! AATAAGAAATAAATAAAAAG+TGG - Chr7:47666243-47666262 MsG0780038494.01.T01:intron 10.0%
!! AGAAAAAAAAATTACATAAA+GGG + Chr7:47667189-47667208 None:intergenic 10.0%
!! AGTATTAAAAATTGAAAAAA+TGG - Chr7:47666347-47666366 MsG0780038494.01.T01:intron 10.0%
!! CTTTGATAAAAAAAAAATTA+AGG + Chr7:47669423-47669442 None:intergenic 10.0%
!! GTATTAAAAATTGAAAAAAT+GGG - Chr7:47666348-47666367 MsG0780038494.01.T01:intron 10.0%
!!! AGATCATAATATTTAATTTT+TGG - Chr7:47668603-47668622 MsG0780038494.01.T01:intron 10.0%
!!! ATTTTTCCATATTAAAAAAA+TGG - Chr7:47665417-47665436 MsG0780038494.01.T01:CDS 10.0%
!!! TAATAACCATTTTTTTAATA+TGG + Chr7:47665426-47665445 None:intergenic 10.0%
!! AATAAAAATTGATCATAACA+TGG + Chr7:47667893-47667912 None:intergenic 15.0%
!! TTCAAAAAAAAAATTTGACT+TGG + Chr7:47667772-47667791 None:intergenic 15.0%
!!! AAAATTTAACTTTTTTTGGT+GGG + Chr7:47666464-47666483 None:intergenic 15.0%
!!! AAGTCAAATTTTTTTTTTGA+AGG - Chr7:47667771-47667790 MsG0780038494.01.T01:intron 15.0%
!!! CATATATATTTTTACATTAG+TGG + Chr7:47668121-47668140 None:intergenic 15.0%
!!! TAAAATTTAACTTTTTTTGG+TGG + Chr7:47666465-47666484 None:intergenic 15.0%
!!! TTATGATCATACTTTTTTTT+AGG - Chr7:47667806-47667825 MsG0780038494.01.T01:intron 15.0%
!!! TTTTTGAAATTTTTTCGTAT+CGG - Chr7:47665509-47665528 MsG0780038494.01.T01:CDS 15.0%
!! AAAATTATGTTAGTACAGAT+TGG - Chr7:47667520-47667539 MsG0780038494.01.T01:intron 20.0%
!! AAATGAAAATGCTACTAATT+TGG + Chr7:47666991-47667010 None:intergenic 20.0%
!! AAGAAATAAATAAAAAGTGG+TGG - Chr7:47666246-47666265 MsG0780038494.01.T01:intron 20.0%
!! AGAAATAAATAAAAAGTGGT+GGG - Chr7:47666247-47666266 MsG0780038494.01.T01:intron 20.0%
!! ATAATTATCTATGTATTTCG+AGG + Chr7:47666568-47666587 None:intergenic 20.0%
!! CAAACCTCAATAAAAAAATA+GGG - Chr7:47667619-47667638 MsG0780038494.01.T01:intron 20.0%
!! GAAATCATTCAAAACTTTAA+TGG + Chr7:47666857-47666876 None:intergenic 20.0%
!! TCAAACCTCAATAAAAAAAT+AGG - Chr7:47667618-47667637 MsG0780038494.01.T01:intron 20.0%
!! TTACAATAATATGTTACCTA+CGG + Chr7:47667460-47667479 None:intergenic 20.0%
!! TTCTTTCTTATATTTCTTTC+TGG - Chr7:47668011-47668030 MsG0780038494.01.T01:CDS 20.0%
!!! AAACGAATTTTTGAAAGTAA+AGG - Chr7:47665850-47665869 MsG0780038494.01.T01:CDS 20.0%
!!! AAATTTAACTTTTTTTGGTG+GGG + Chr7:47666463-47666482 None:intergenic 20.0%
!!! ATATGTAACTTTTGTATCTA+TGG - Chr7:47668341-47668360 MsG0780038494.01.T01:intron 20.0%
!!! ATTTCATTATTAATTTGTCG+AGG - Chr7:47669447-47669466 MsG0780038494.01.T01:intron 20.0%
!!! CAATTTTGTGTTTAATATAG+AGG - Chr7:47666627-47666646 MsG0780038494.01.T01:intron 20.0%
!!! GGAAAAAAAATCATGAATTT+TGG + Chr7:47665978-47665997 None:intergenic 20.0%
!!! TTAACCCTATTTTTTTATTG+AGG + Chr7:47667626-47667645 None:intergenic 20.0%
!!! TTTATTTGTATCTTGATGAT+GGG - Chr7:47665119-47665138 MsG0780038494.01.T01:CDS 20.0%
! AAATCAATTATTTAGGAGAC+CGG - Chr7:47668485-47668504 MsG0780038494.01.T01:intron 25.0%
! ACAATTTATCGTGAAAAACT+TGG + Chr7:47666048-47666067 None:intergenic 25.0%
! ACTAGCAAACAATATGTATT+GGG + Chr7:47667679-47667698 None:intergenic 25.0%
! ATATTATGATCTATGAAGCA+CGG + Chr7:47668595-47668614 None:intergenic 25.0%
! CTGATTCTTCAAAAAAAACT+GGG + Chr7:47668871-47668890 None:intergenic 25.0%
! CTGTTACAAAACAAACTTAA+AGG - Chr7:47669288-47669307 MsG0780038494.01.T01:intron 25.0%
! CTGTTACAAAACAAACTTAA+AGG + Chr7:47669307-47669288 None:intergenic 25.0%
! CTTTACAACCAAAATTATTG+AGG + Chr7:47665931-47665950 None:intergenic 25.0%
! GAAATAAATAAAAAGTGGTG+GGG - Chr7:47666248-47666267 MsG0780038494.01.T01:intron 25.0%
! GATAGTAGATGAATAAATCA+AGG + Chr7:47668252-47668271 None:intergenic 25.0%
! GTATATTGAGATGAAAAAGA+AGG + Chr7:47666523-47666542 None:intergenic 25.0%
! GTTACAAACATCAAACTTAA+AGG + Chr7:47668707-47668726 None:intergenic 25.0%
! GTTTATTTGTATCTTGATGA+TGG - Chr7:47665118-47665137 MsG0780038494.01.T01:CDS 25.0%
! GTTTGATGTTTGTAACATAT+AGG - Chr7:47668711-47668730 MsG0780038494.01.T01:intron 25.0%
! TAACATATATGTAACTGTGT+TGG + Chr7:47668147-47668166 None:intergenic 25.0%
! TATATATAGTACGTAGGATT+TGG + Chr7:47666924-47666943 None:intergenic 25.0%
! TATGAATAAAAATGGAGTCA+GGG - Chr7:47669135-47669154 MsG0780038494.01.T01:intron 25.0%
! TCAAAAATCAAGATACGATA+CGG + Chr7:47665496-47665515 None:intergenic 25.0%
! TCTTTACTGCTATAATTTAG+AGG - Chr7:47667206-47667225 MsG0780038494.01.T01:intron 25.0%
!! AACACTAACAATATTCCTTT+TGG - Chr7:47665253-47665272 MsG0780038494.01.T01:CDS 25.0%
!! AGCTTTGGTATGAATAAAAA+TGG - Chr7:47669127-47669146 MsG0780038494.01.T01:intron 25.0%
!! AGTAGAAGTTTTTCTCAATT+CGG - Chr7:47669632-47669651 MsG0780038494.01.T01:intron 25.0%
!! AGTTGAAAAGTTGATTTATG+TGG + Chr7:47667985-47668004 None:intergenic 25.0%
!! CATAAGATAACACTTTTATG+AGG - Chr7:47667268-47667287 MsG0780038494.01.T01:intron 25.0%
!! TAATTGGACCTCAATAATTT+TGG - Chr7:47665920-47665939 MsG0780038494.01.T01:intron 25.0%
!! TACAAATCCATACTTTTCAA+AGG + Chr7:47666951-47666970 None:intergenic 25.0%
!! TTTTGAATGAAGGGATAAAA+TGG - Chr7:47666809-47666828 MsG0780038494.01.T01:intron 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG - Chr7:47668680-47668699 MsG0780038494.01.T01:intron 25.0%
!!! AAGTTTGTTTTGTAACAGAT+AGG + Chr7:47668699-47668680 None:intergenic 25.0%
!!! AGTAATGATGTGTTCTTTTT+TGG - Chr7:47665197-47665216 MsG0780038494.01.T01:CDS 25.0%
!!! ATGTCACTTTTATCTTACAT+GGG - Chr7:47665585-47665604 MsG0780038494.01.T01:CDS 25.0%
!!! ATTTTTTCGTATCGGTTTAT+CGG - Chr7:47665517-47665536 MsG0780038494.01.T01:CDS 25.0%
!!! CTTTGTACTTTTTGAATGAA+GGG - Chr7:47666800-47666819 MsG0780038494.01.T01:intron 25.0%
!!! TATTGGTTTGTTACTTTTGT+AGG + Chr7:47667150-47667169 None:intergenic 25.0%
!!! TGATTTTGTTTTGTAAAACG+TGG + Chr7:47667122-47667141 None:intergenic 25.0%
AAAAAAACTGGGTGTAGTAA+AGG + Chr7:47668860-47668879 None:intergenic 30.0%
AAATTACATAAAGGGTTCCA+AGG + Chr7:47667181-47667200 None:intergenic 30.0%
AACAACAATAAAAGCTCCAA+TGG - Chr7:47665659-47665678 MsG0780038494.01.T01:CDS 30.0%
AACCAAGTCTCTATTTATAG+AGG + Chr7:47665999-47666018 None:intergenic 30.0%
AATAATGCTGGTATTACACT+TGG - Chr7:47669081-47669100 MsG0780038494.01.T01:intron 30.0%
AGGGTTAAAATTCTCAAAGA+GGG - Chr7:47667638-47667657 MsG0780038494.01.T01:intron 30.0%
AGTGCTATACTATATCCAAA+AGG + Chr7:47665271-47665290 None:intergenic 30.0%
ATGTTATACACCATTGTACA+TGG - Chr7:47666387-47666406 MsG0780038494.01.T01:intron 30.0%
CAAAACTTTAATGGAAGACA+TGG + Chr7:47666848-47666867 None:intergenic 30.0%
CCTGATTCTTCAAAAAAAAC+TGG + Chr7:47668872-47668891 None:intergenic 30.0%
GACTAGCAAACAATATGTAT+TGG + Chr7:47667680-47667699 None:intergenic 30.0%
GAGAACTGTTGATCAATTAA+TGG + Chr7:47668316-47668335 None:intergenic 30.0%
GTATGAATAAAAATGGAGTC+AGG - Chr7:47669134-47669153 MsG0780038494.01.T01:intron 30.0%
GTTACAAACGTCAAACTTAA+AGG - Chr7:47669319-47669338 MsG0780038494.01.T01:intron 30.0%
GTTACAAACGTCAAACTTAA+AGG + Chr7:47669338-47669319 None:intergenic 30.0%
GTTTGACGTTTGTAACATAT+AGG - Chr7:47668651-47668670 MsG0780038494.01.T01:intron 30.0%
GTTTGACGTTTGTAACATAT+AGG + Chr7:47668670-47668651 None:intergenic 30.0%
TACAAATAAACTTCCGAATC+CGG + Chr7:47665109-47665128 None:intergenic 30.0%
TAGGGTTAAAATTCTCAAAG+AGG - Chr7:47667637-47667656 MsG0780038494.01.T01:intron 30.0%
TATGAGTGTTATATAGGTGT+CGG - Chr7:47668430-47668449 MsG0780038494.01.T01:intron 30.0%
TATGTATTGGGACATAAACA+AGG + Chr7:47667667-47667686 None:intergenic 30.0%
TGAGAAAAACTTCTACTGTT+AGG + Chr7:47669629-47669648 None:intergenic 30.0%
TGATCATAATCTATGAAGCA+TGG - Chr7:47668048-47668067 MsG0780038494.01.T01:CDS 30.0%
TTAAGAGAGAGAAAATGATG+TGG - Chr7:47666324-47666343 MsG0780038494.01.T01:intron 30.0%
TTAAGGTTTAATTACACCAC+AGG + Chr7:47669406-47669425 None:intergenic 30.0%
TTCCTCTATAAATAGAGACT+TGG - Chr7:47665994-47666013 MsG0780038494.01.T01:intron 30.0%
TTCTTTCCTAGAAAATGATG+TGG + Chr7:47666879-47666898 None:intergenic 30.0%
! AACTTCTACTGTTAGGATTT+TGG + Chr7:47669622-47669641 None:intergenic 30.0%
! AGCTAAAATGCTAGTTGATA+AGG - Chr7:47667948-47667967 MsG0780038494.01.T01:CDS 30.0%
! AGTTGCTAATCTCTTTTGAT+TGG + Chr7:47667357-47667376 None:intergenic 30.0%
! AGTTTTTCACGTGAAAAATG+TGG - Chr7:47667024-47667043 MsG0780038494.01.T01:intron 30.0%
! ATAGCTTCCTTTGAAAAGTA+TGG - Chr7:47666941-47666960 MsG0780038494.01.T01:intron 30.0%
! GTTTTTCACGTGAAAAATGT+GGG - Chr7:47667025-47667044 MsG0780038494.01.T01:intron 30.0%
! TGATTTCCACATCATTTTCT+AGG - Chr7:47666870-47666889 MsG0780038494.01.T01:intron 30.0%
! TTCAACTTTTACATCTCCAA+TGG + Chr7:47666293-47666312 None:intergenic 30.0%
! TTTGTTGAGAGTATGTTGAA+TGG - Chr7:47665682-47665701 MsG0780038494.01.T01:CDS 30.0%
!! ATTGAAAAAATGGGTGTTGA+AGG - Chr7:47666357-47666376 MsG0780038494.01.T01:intron 30.0%
!! CTTATATTTCTTTCTGGAGT+AGG - Chr7:47668017-47668036 MsG0780038494.01.T01:CDS 30.0%
!! GCTTTGTACTTTTTGAATGA+AGG - Chr7:47666799-47666818 MsG0780038494.01.T01:intron 30.0%
!! TTCACTGATTTGAAAGATCT+TGG - Chr7:47669510-47669529 MsG0780038494.01.T01:intron 30.0%
!! TTGAAAAAATGGGTGTTGAA+GGG - Chr7:47666358-47666377 MsG0780038494.01.T01:intron 30.0%
!!! CATGTCACTTTTATCTTACA+TGG - Chr7:47665584-47665603 MsG0780038494.01.T01:CDS 30.0%
!!! CCAGTTTTTTTTGAAGAATC+AGG - Chr7:47668869-47668888 MsG0780038494.01.T01:intron 30.0%
!!! TGGATATAGTGCTTCTTTTT+TGG - Chr7:47665217-47665236 MsG0780038494.01.T01:CDS 30.0%
AAACACAAGAAACCAGTCAT+AGG + Chr7:47665391-47665410 None:intergenic 35.0%
AAACCAATATCTGTGTACCT+TGG - Chr7:47667161-47667180 MsG0780038494.01.T01:intron 35.0%
AACTGTTGTCTTCTTTCCTT+CGG + Chr7:47668904-47668923 None:intergenic 35.0%
AATACAACAAGTCTCTTCCA+TGG + Chr7:47670209-47670228 None:intergenic 35.0%
ACAATGAAATTGTTGCAGAG+TGG + Chr7:47670328-47670347 None:intergenic 35.0%
ACATACTCTCAACAAACCAT+TGG + Chr7:47665678-47665697 None:intergenic 35.0%
ACCACACGAAATCTAATTGT+TGG - Chr7:47668926-47668945 MsG0780038494.01.T01:intron 35.0%
AGCTAACTATTTGAGAACCA+TGG + Chr7:47669478-47669497 None:intergenic 35.0%
ATAAGAAGTGAGAGAAGCTT+TGG + Chr7:47666770-47666789 None:intergenic 35.0%
ATTAGTGACATCATCATTGG+AGG + Chr7:47670067-47670086 None:intergenic 35.0%
ATTTGCATGGTGAAGCATAA+GGG - Chr7:47670226-47670245 MsG0780038494.01.T01:CDS 35.0%
GATTACCAAGTACATTGCAA+AGG - Chr7:47668970-47668989 MsG0780038494.01.T01:intron 35.0%
GATTTGACGAATTCAAGCTT+TGG - Chr7:47669112-47669131 MsG0780038494.01.T01:intron 35.0%
GCACACTGTTACAAAGTTAA+AGG - Chr7:47669259-47669278 MsG0780038494.01.T01:intron 35.0%
GCTTGAATTCGTCAAATCAA+TGG + Chr7:47669110-47669129 None:intergenic 35.0%
GGAAGCTATATATAGTACGT+AGG + Chr7:47666930-47666949 None:intergenic 35.0%
GGGTTAAAATTCTCAAAGAG+GGG - Chr7:47667639-47667658 MsG0780038494.01.T01:intron 35.0%
GTAATACCAGCATTATTGCA+GGG + Chr7:47669078-47669097 None:intergenic 35.0%
GTTTGACGTTTGTAACATAC+AGG + Chr7:47669315-47669334 None:intergenic 35.0%
TAATACCAGCATTATTGCAG+GGG + Chr7:47669077-47669096 None:intergenic 35.0%
TATAAGGTAGTGACAGAGTT+AGG + Chr7:47666742-47666761 None:intergenic 35.0%
TATTGCCTTTGCAATGTACT+TGG + Chr7:47668978-47668997 None:intergenic 35.0%
TATTTGCATGGTGAAGCATA+AGG - Chr7:47670225-47670244 MsG0780038494.01.T01:intron 35.0%
TCCAACAATTAGATTTCGTG+TGG + Chr7:47668930-47668949 None:intergenic 35.0%
TCCATTAGTGACATCATCAT+TGG + Chr7:47670070-47670089 None:intergenic 35.0%
TGAAGAATGTGAAGATGATG+AGG - Chr7:47670171-47670190 MsG0780038494.01.T01:intron 35.0%
TGAGAATTGGGGAAATGTAA+GGG - Chr7:47669160-47669179 MsG0780038494.01.T01:intron 35.0%
TGAGTTATCAGAGTTGTCTT+TGG - Chr7:47665078-47665097 MsG0780038494.01.T01:CDS 35.0%
TGTAATACCAGCATTATTGC+AGG + Chr7:47669079-47669098 None:intergenic 35.0%
TTGAGAATTGGGGAAATGTA+AGG - Chr7:47669159-47669178 MsG0780038494.01.T01:intron 35.0%
TTTCAACATGCCATTGCAAA+TGG + Chr7:47665630-47665649 None:intergenic 35.0%
! AAATAAAAAGTGGTGGGGTA+GGG - Chr7:47666253-47666272 MsG0780038494.01.T01:intron 35.0%
! CACTTTTATGAGGAAATGTC+AGG - Chr7:47667278-47667297 MsG0780038494.01.T01:intron 35.0%
! CTACTGTTAGGATTTTGGAT+AGG + Chr7:47669617-47669636 None:intergenic 35.0%
! GAGACTTGGTTCATTTGATT+TGG - Chr7:47666008-47666027 MsG0780038494.01.T01:intron 35.0%
! GGTGTTGAATGAAAAACCAT+TGG - Chr7:47666274-47666293 MsG0780038494.01.T01:intron 35.0%
! TAAATAAAAAGTGGTGGGGT+AGG - Chr7:47666252-47666271 MsG0780038494.01.T01:intron 35.0%
! TCCAATGATGATGTCACTAA+TGG - Chr7:47670066-47670085 MsG0780038494.01.T01:intron 35.0%
! TGCAATGTACTTGGTAATCT+TGG + Chr7:47668969-47668988 None:intergenic 35.0%
! TGGATAGGAATATCTGAAGT+TGG + Chr7:47669602-47669621 None:intergenic 35.0%
! TGGATATAGTATAGCACTGA+TGG - Chr7:47665273-47665292 MsG0780038494.01.T01:CDS 35.0%
!! AGAGACTTGTTGTATTTGCA+TGG - Chr7:47670213-47670232 MsG0780038494.01.T01:intron 35.0%
!! TGTTCTAAGACCATGTACAA+TGG + Chr7:47666400-47666419 None:intergenic 35.0%
!! TTGTATCTTGATGATGGGAA+TGG - Chr7:47665124-47665143 MsG0780038494.01.T01:CDS 35.0%
!!! AAGTTTTGTTCGCTGAAACA+TGG - Chr7:47665773-47665792 MsG0780038494.01.T01:CDS 35.0%
!!! TCACGTCAGCGTTTTTTTTA+CGG + Chr7:47668813-47668832 None:intergenic 35.0%
!!! TTAACTTTTTTTGGTGGGGT+GGG + Chr7:47666459-47666478 None:intergenic 35.0%
!!! TTACCTACGGTCTTTTTTGT+TGG + Chr7:47667447-47667466 None:intergenic 35.0%
!!! TTTAACTTTTTTTGGTGGGG+TGG + Chr7:47666460-47666479 None:intergenic 35.0%
!!! TTTTGGCTTAATTACACCAC+AGG - Chr7:47668620-47668639 MsG0780038494.01.T01:intron 35.0%
AAATCAAGATACGATACGGC+TGG + Chr7:47665492-47665511 None:intergenic 40.0%
AAGATCTTGGAAAGCCTTCA+AGG - Chr7:47669523-47669542 MsG0780038494.01.T01:intron 40.0%
AATCAAGATACGATACGGCT+GGG + Chr7:47665491-47665510 None:intergenic 40.0%
AATCAGGAGAAGATAACCGA+AGG - Chr7:47668885-47668904 MsG0780038494.01.T01:intron 40.0%
AATTTGTCGAGGAAAGACCA+TGG - Chr7:47669458-47669477 MsG0780038494.01.T01:intron 40.0%
ACAACAAGAAACCAGAGACA+GGG - Chr7:47669957-47669976 MsG0780038494.01.T01:intron 40.0%
ACAAGAGGAAGCAAAATGGA+AGG + Chr7:47667085-47667104 None:intergenic 40.0%
ACTTGAGATCACGATGTAAG+AGG + Chr7:47667598-47667617 None:intergenic 40.0%
AGACCAACAAAAAAGACCGT+AGG - Chr7:47667441-47667460 MsG0780038494.01.T01:intron 40.0%
AGAGTTGTCTTTGGATGAAC+CGG - Chr7:47665087-47665106 MsG0780038494.01.T01:CDS 40.0%
ATGCCATTGCAAATGGTCTA+AGG + Chr7:47665623-47665642 None:intergenic 40.0%
GAATGTGAAGATGATGAGGA+TGG - Chr7:47670175-47670194 MsG0780038494.01.T01:intron 40.0%
GAATTTCTTCGTGAGAGTTG+CGG + Chr7:47669851-47669870 None:intergenic 40.0%
GAGTATGTTGAATGGTGAGA+TGG - Chr7:47665690-47665709 MsG0780038494.01.T01:CDS 40.0%
GCACACTGTTACAGAGTTAA+AGG + Chr7:47668767-47668786 None:intergenic 40.0%
GGAAGGCTATACTGAGTTAT+TGG + Chr7:47667068-47667087 None:intergenic 40.0%
GGCTCGTATGAGTGTTATAT+AGG - Chr7:47668424-47668443 MsG0780038494.01.T01:intron 40.0%
GTTCCAAGGTACACAGATAT+TGG + Chr7:47667167-47667186 None:intergenic 40.0%
TAAAAGTCACTACACGTCCT+CGG + Chr7:47669901-47669920 None:intergenic 40.0%
TCAATTCCAACACCATCAAG+TGG + Chr7:47665061-47665080 None:intergenic 40.0%
TCACCTTAGACCATTTGCAA+TGG - Chr7:47665617-47665636 MsG0780038494.01.T01:CDS 40.0%
TCCGTATTGTATCTCGTATC+CGG - Chr7:47665552-47665571 MsG0780038494.01.T01:CDS 40.0%
TCGAACAAGAGGAAGCAAAA+TGG + Chr7:47667089-47667108 None:intergenic 40.0%
TCTACAAGCGTTCGATTCTT+GGG + Chr7:47667404-47667423 None:intergenic 40.0%
TTGGGGAAATGTAAGGGTAA+AGG - Chr7:47669166-47669185 MsG0780038494.01.T01:intron 40.0%
TTTCTGCAGGATGTGTTCAA+GGG - Chr7:47670276-47670295 MsG0780038494.01.T01:CDS 40.0%
! AGAAGCTTTGGTGGCTTATA+AGG + Chr7:47666758-47666777 None:intergenic 40.0%
! TGTACATGGTCTTAGAACAG+AGG - Chr7:47666401-47666420 MsG0780038494.01.T01:intron 40.0%
! TTTCTTGTTGTCATCGTCGT+CGG + Chr7:47669948-47669967 None:intergenic 40.0%
! TTTTACGGTGAGTTAGCAGA+AGG + Chr7:47668798-47668817 None:intergenic 40.0%
!! AACACGTGCTGCTTTGTTAT+TGG - Chr7:47665873-47665892 MsG0780038494.01.T01:intron 40.0%
!! CTGCTTTGTTATTGGTTGTC+CGG - Chr7:47665881-47665900 MsG0780038494.01.T01:intron 40.0%
!! TATCTTGATGATGGGAATGG+AGG - Chr7:47665127-47665146 MsG0780038494.01.T01:CDS 40.0%
!! TTTTAGAGACAGCTTCGATG+AGG - Chr7:47669916-47669935 MsG0780038494.01.T01:intron 40.0%
!!! CCACGTCAGCGTTTTTTTTA+CGG - Chr7:47669213-47669232 MsG0780038494.01.T01:intron 40.0%
AACACATCCTGCAGAAACTG+TGG + Chr7:47670273-47670292 None:intergenic 45.0%
AAGTGACATGCTATGAAGCC+CGG + Chr7:47665574-47665593 None:intergenic 45.0%
AATGGTGAGATGGATGAGAG+AGG - Chr7:47665700-47665719 MsG0780038494.01.T01:CDS 45.0%
AGATGGGATTGGAAGGATCA+AGG - Chr7:47670113-47670132 MsG0780038494.01.T01:intron 45.0%
AGGATTTGGATCCAACGTGT+GGG + Chr7:47666910-47666929 None:intergenic 45.0%
CACATGATACGACACTGACA+TGG - Chr7:47668084-47668103 MsG0780038494.01.T01:intron 45.0%
CCCGGATACGAGATACAATA+CGG + Chr7:47665556-47665575 None:intergenic 45.0%
CCGTAAAAAAAACGCTGACG+TGG + Chr7:47668829-47668810 None:intergenic 45.0%
CCGTATTGTATCTCGTATCC+GGG - Chr7:47665553-47665572 MsG0780038494.01.T01:CDS 45.0%
CGTCAAACTTAAAGGACCTG+TGG - Chr7:47669387-47669406 MsG0780038494.01.T01:intron 45.0%
CGTCAAACTTAAAGGACCTG+TGG + Chr7:47669406-47669387 None:intergenic 45.0%
GAAGATGATGAGGATGGAGA+AGG - Chr7:47670181-47670200 MsG0780038494.01.T01:intron 45.0%
GAATCACCAGAAAACTCCTC+TGG - Chr7:47669809-47669828 MsG0780038494.01.T01:CDS 45.0%
GACAACAAGAAACCAGAGAC+AGG - Chr7:47669956-47669975 MsG0780038494.01.T01:intron 45.0%
GAGTCAGGGTTTGAGAATTG+GGG - Chr7:47669149-47669168 MsG0780038494.01.T01:intron 45.0%
GAGTCGAATCTTGTCCTTGA+AGG + Chr7:47669540-47669559 None:intergenic 45.0%
GATGTGTTCAAGGGAGCTTA+TGG - Chr7:47670285-47670304 MsG0780038494.01.T01:CDS 45.0%
GCGAACAAAACTTCGACACT+TGG + Chr7:47665766-47665785 None:intergenic 45.0%
GGAGTCAGGGTTTGAGAATT+GGG - Chr7:47669148-47669167 MsG0780038494.01.T01:intron 45.0%
GTAGTGTTTGCTCGAACAAG+AGG + Chr7:47667100-47667119 None:intergenic 45.0%
GTCTACAAGCGTTCGATTCT+TGG + Chr7:47667405-47667424 None:intergenic 45.0%
GTCTTGGTGAGTCATGGATT+GGG + Chr7:47669711-47669730 None:intergenic 45.0%
GTCTTTGGATGAACCGGATT+CGG - Chr7:47665093-47665112 MsG0780038494.01.T01:CDS 45.0%
GTTTCTGCAGGATGTGTTCA+AGG - Chr7:47670275-47670294 MsG0780038494.01.T01:CDS 45.0%
TAGGATTTGGATCCAACGTG+TGG + Chr7:47666911-47666930 None:intergenic 45.0%
TGGAGTCAGGGTTTGAGAAT+TGG - Chr7:47669147-47669166 MsG0780038494.01.T01:intron 45.0%
TTATTGCAGGGGAAGAACGT+AGG + Chr7:47669066-47669085 None:intergenic 45.0%
TTCTTCCCCTGCAATAATGC+TGG - Chr7:47669069-47669088 MsG0780038494.01.T01:intron 45.0%
TTTGTCTGAGTTGTCCGACA+CGG - Chr7:47668403-47668422 MsG0780038494.01.T01:intron 45.0%
! AAACGGCTCTGATGACACAT+TGG + Chr7:47669876-47669895 None:intergenic 45.0%
! ACATGGTCTTAGAACAGAGG+CGG - Chr7:47666404-47666423 MsG0780038494.01.T01:intron 45.0%
! AGAAGTGAGAGAAGCTTTGG+TGG + Chr7:47666767-47666786 None:intergenic 45.0%
! GTTGGTCTCGTCTTCTTTGA+TGG + Chr7:47667429-47667448 None:intergenic 45.0%
! TACGGGTGTCATATGAGTGT+CGG - Chr7:47668522-47668541 MsG0780038494.01.T01:intron 45.0%
! TTCTTGTTGTCATCGTCGTC+GGG + Chr7:47669947-47669966 None:intergenic 45.0%
!! CATGAACCACTTGATGGTGT+TGG - Chr7:47665052-47665071 MsG0780038494.01.T01:CDS 45.0%
!! GATGTCACTAATGGACTTGC+TGG - Chr7:47670075-47670094 MsG0780038494.01.T01:intron 45.0%
!! TTCTGGCTTCATGTGAGTCA+CGG - Chr7:47666433-47666452 MsG0780038494.01.T01:intron 45.0%
!!! AGCACTGATGGTGCTGTTTT+TGG - Chr7:47665285-47665304 MsG0780038494.01.T01:CDS 45.0%
!!! GCACTGATGGTGCTGTTTTT+GGG - Chr7:47665286-47665305 MsG0780038494.01.T01:CDS 45.0%
!! AAAAATTACTAAAATATAAT+TGG - Chr7:47666491-47666510 MsG0780038494.01.T01:intron 5.0%
!! TTATTAAAAAAATTAAAATC+CGG + Chr7:47665903-47665922 None:intergenic 5.0%
!!! AATTTATTTTTTAGTTTTTT+TGG + Chr7:47666149-47666168 None:intergenic 5.0%
!!! TAATAAAATTTAACTTTTTT+TGG + Chr7:47666468-47666487 None:intergenic 5.0%
AACACTCATACGAGCCGTGT+CGG + Chr7:47668420-47668439 None:intergenic 50.0%
AACCGTCGAGAGAAGTTTGC+TGG - Chr7:47667308-47667327 MsG0780038494.01.T01:intron 50.0%
AAGATTCGACTCAAGCGCAC+TGG - Chr7:47669548-47669567 MsG0780038494.01.T01:intron 50.0%
AAGGGAGCTTATGGTGGCTA+AGG - Chr7:47670294-47670313 MsG0780038494.01.T01:CDS 50.0%
ACAAGAAACCAGAGACAGGG+AGG - Chr7:47669960-47669979 MsG0780038494.01.T01:intron 50.0%
ACAAGCGTTCGATTCTTGGG+AGG + Chr7:47667401-47667420 None:intergenic 50.0%
ACTACACGTCCTCGGTGAAA+CGG + Chr7:47669893-47669912 None:intergenic 50.0%
AGCCAGCAAACTTCTCTCGA+CGG + Chr7:47667313-47667332 None:intergenic 50.0%
AGGGAGCTTATGGTGGCTAA+GGG - Chr7:47670295-47670314 MsG0780038494.01.T01:CDS 50.0%
ATCGGAAGAGTCCAATGCTC+CGG - Chr7:47669739-47669758 MsG0780038494.01.T01:intron 50.0%
ATGAAGCATGGAGTCCGACA+CGG - Chr7:47668060-47668079 MsG0780038494.01.T01:CDS 50.0%
ATGTGCTACGAGCCTATGAC+TGG - Chr7:47665376-47665395 MsG0780038494.01.T01:CDS 50.0%
CAAGAAACCAGAGACAGGGA+GGG - Chr7:47669961-47669980 MsG0780038494.01.T01:intron 50.0%
CGTCGTGGTGAGTTTGGATT+CGG + Chr7:47669673-47669692 None:intergenic 50.0%
CTTGCTGGAGGAGACTGATA+GGG - Chr7:47670090-47670109 MsG0780038494.01.T01:intron 50.0%
GAATCACAATGCCCACACGT+TGG - Chr7:47666896-47666915 MsG0780038494.01.T01:intron 50.0%
GACTCACATGAAGCCAGAAG+TGG + Chr7:47666432-47666451 None:intergenic 50.0%
GACTGATAGGGAGATGGGAT+TGG - Chr7:47670102-47670121 MsG0780038494.01.T01:intron 50.0%
GAGGAGACTGATAGGGAGAT+GGG - Chr7:47670097-47670116 MsG0780038494.01.T01:intron 50.0%
GATAGGGAGATGGGATTGGA+AGG - Chr7:47670106-47670125 MsG0780038494.01.T01:intron 50.0%
GATGCGCATGAACCACTTGA+TGG - Chr7:47665046-47665065 MsG0780038494.01.T01:CDS 50.0%
GGTCTTGGTGAGTCATGGAT+TGG + Chr7:47669712-47669731 None:intergenic 50.0%
GTCAAGGTCTTGGTGAGTCA+TGG + Chr7:47669717-47669736 None:intergenic 50.0%
GTCGTATCATGTGTCCGTGT+CGG + Chr7:47668077-47668096 None:intergenic 50.0%
GTGTTCAAGGGAGCTTATGG+TGG - Chr7:47670288-47670307 MsG0780038494.01.T01:CDS 50.0%
GTTCGATTCTTGGGAGGTGA+TGG + Chr7:47667395-47667414 None:intergenic 50.0%
TACTTCGACACTCCTGCGAT+CGG + Chr7:47668459-47668478 None:intergenic 50.0%
TATGAAGCACGGACACCTCT+AGG + Chr7:47668584-47668603 None:intergenic 50.0%
TCACCAAGACCTTGACCCAT+CGG - Chr7:47669721-47669740 MsG0780038494.01.T01:intron 50.0%
TCACCAGAAAACTCCTCTGG+CGG - Chr7:47669812-47669831 MsG0780038494.01.T01:CDS 50.0%
TGATTCGACAGAGAGACGTG+TGG + Chr7:47669795-47669814 None:intergenic 50.0%
TTGACATGTTTGCGTCGTCG+TGG + Chr7:47669688-47669707 None:intergenic 50.0%
! ACTTGCTGGAGGAGACTGAT+AGG - Chr7:47670089-47670108 MsG0780038494.01.T01:intron 50.0%
! GATTCTTGGGAGGTGATGGT+TGG + Chr7:47667391-47667410 None:intergenic 50.0%
! TTGGGAGGTGATGGTTGGTT+AGG + Chr7:47667386-47667405 None:intergenic 50.0%
!! GAGCATTGGACTCTTCCGAT+GGG + Chr7:47669739-47669758 None:intergenic 50.0%
!! GTCACTAATGGACTTGCTGG+AGG - Chr7:47670078-47670097 MsG0780038494.01.T01:intron 50.0%
!! TGATGATGGGAATGGAGGAG+AGG - Chr7:47665132-47665151 MsG0780038494.01.T01:CDS 50.0%
CAGAGAGACGTGTGGACATG+CGG + Chr7:47669787-47669806 None:intergenic 55.0%
CAGAGGTGGATGCTTCAGGA+GGG - Chr7:47670041-47670060 MsG0780038494.01.T01:intron 55.0%
CCGTACGACACGTGTCAAAC+CGG + Chr7:47668507-47668526 None:intergenic 55.0%
CGACACTTGGCACTTTCGTC+AGG + Chr7:47665753-47665772 None:intergenic 55.0%
CGGTTTGACACGTGTCGTAC+GGG - Chr7:47668505-47668524 MsG0780038494.01.T01:intron 55.0%
CTGCAGAAACTGTGGCCACA+AGG + Chr7:47670265-47670284 None:intergenic 55.0%
CTTCCGATGGGTCAAGGTCT+TGG + Chr7:47669727-47669746 None:intergenic 55.0%
CTTGTGGCCACAGTTTCTGC+AGG - Chr7:47670263-47670282 MsG0780038494.01.T01:CDS 55.0%
GCGAGTGAACTGTGGTCTAG+TGG + Chr7:47669765-47669784 None:intergenic 55.0%
GGAGGAGACTGATAGGGAGA+TGG - Chr7:47670096-47670115 MsG0780038494.01.T01:intron 55.0%
GTGAACTGTGGTCTAGTGGC+CGG + Chr7:47669761-47669780 None:intergenic 55.0%
TCATCAGAGCCGTTTCACCG+AGG - Chr7:47669881-47669900 MsG0780038494.01.T01:CDS 55.0%
TGCGACATGCCTAGTCCTAG+AGG - Chr7:47668566-47668585 MsG0780038494.01.T01:intron 55.0%
TGGACTCTTCCGATGGGTCA+AGG + Chr7:47669733-47669752 None:intergenic 55.0%
TTCTTCGTGAGAGTTGCGGC+CGG + Chr7:47669847-47669866 None:intergenic 55.0%
TTGCGTCGTCGTGGTGAGTT+TGG + Chr7:47669679-47669698 None:intergenic 55.0%
! CCGGTTTGACACGTGTCGTA+CGG - Chr7:47668504-47668523 MsG0780038494.01.T01:intron 55.0%
! CGGCTCTGATGACACATTGG+TGG + Chr7:47669873-47669892 None:intergenic 55.0%
! GGAGGTGATGGTTGGTTAGG+TGG + Chr7:47667383-47667402 None:intergenic 55.0%
!! AGAGACAGGGAGGGCACTTT+CGG - Chr7:47669970-47669989 MsG0780038494.01.T01:intron 55.0%
!! GGAGCATTGGACTCTTCCGA+TGG + Chr7:47669740-47669759 None:intergenic 55.0%
!! TCAAGCGCACTGGCTCTACT+TGG - Chr7:47669558-47669577 MsG0780038494.01.T01:intron 55.0%
!! TGAGGATGGAGAAGGTGCCA+TGG - Chr7:47670189-47670208 MsG0780038494.01.T01:intron 55.0%
!!! GGTGCTGCTTTTGCTCCTTG+TGG - Chr7:47670247-47670266 MsG0780038494.01.T01:CDS 55.0%
AACAGAGGCGGAGCCACTTC+TGG - Chr7:47666416-47666435 MsG0780038494.01.T01:intron 60.0%
ACTTTCGGCAAGGGAGGCAG+TGG - Chr7:47669985-47670004 MsG0780038494.01.T01:intron 60.0%
AGAAGCTGCTGCAGCAGCAG+AGG - Chr7:47670024-47670043 MsG0780038494.01.T01:intron 60.0%
CCAGAAAACTCCTCTGGCGG+AGG - Chr7:47669815-47669834 MsG0780038494.01.T01:CDS 60.0%
CCTCTGGCGGAGGAAATCTC+CGG - Chr7:47669825-47669844 MsG0780038494.01.T01:CDS 60.0%
GACATGCGGCGAGTGAACTG+TGG + Chr7:47669773-47669792 None:intergenic 60.0%
GCAGAGGTGGATGCTTCAGG+AGG - Chr7:47670040-47670059 MsG0780038494.01.T01:intron 60.0%
GCAGCAGAGGTGGATGCTTC+AGG - Chr7:47670037-47670056 MsG0780038494.01.T01:intron 60.0%
TCGCAGTGACCGACATGCGT+CGG + Chr7:47668551-47668570 None:intergenic 60.0%
TGGTCTAGTGGCCGGAGCAT+TGG + Chr7:47669753-47669772 None:intergenic 60.0%
TGTCGGACACCGACGCATGT+CGG - Chr7:47668539-47668558 MsG0780038494.01.T01:intron 60.0%
! CCTCCGCCAGAGGAGTTTTC+TGG + Chr7:47669818-47669837 None:intergenic 60.0%
!! AGGGAGGGCACTTTCGGCAA+GGG - Chr7:47669976-47669995 MsG0780038494.01.T01:intron 60.0%
!! GAAAGTGCCCTCCCTGTCTC+TGG + Chr7:47669971-47669990 None:intergenic 60.0%
!! GCACGGACACCTCTAGGACT+AGG + Chr7:47668578-47668597 None:intergenic 60.0%
ACGCACAGACAACACGCGCG+AGG - Chr7:47665808-47665827 MsG0780038494.01.T01:CDS 65.0%
AGCTGCTGCAGCAGCAGAGG+TGG - Chr7:47670027-47670046 MsG0780038494.01.T01:intron 65.0%
CACGCGCGAGGTGCAGTTGA+CGG - Chr7:47665820-47665839 MsG0780038494.01.T01:CDS 65.0%
CCGGAGATTTCCTCCGCCAG+AGG + Chr7:47669828-47669847 None:intergenic 65.0%
!! AGGTGTCGGACACCGATCGC+AGG - Chr7:47668444-47668463 MsG0780038494.01.T01:intron 65.0%
!! CAGGGAGGGCACTTTCGGCA+AGG - Chr7:47669975-47669994 MsG0780038494.01.T01:intron 65.0%
!! GAGGGCACTTTCGGCAAGGG+AGG - Chr7:47669979-47669998 MsG0780038494.01.T01:intron 65.0%
AAGGGAGGCAGTGGCAGCGC+AGG - Chr7:47669994-47670013 MsG0780038494.01.T01:intron 70.0%
GGAGGCAGTGGCAGCGCAGG+AGG - Chr7:47669997-47670016 MsG0780038494.01.T01:intron 75.0%
GGCAGTGGCAGCGCAGGAGG+CGG - Chr7:47670000-47670019 MsG0780038494.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 47665028 47670369 47665028 ID=MsG0780038494.01;Name=MsG0780038494.01
Chr7 mRNA 47665028 47670369 47665028 ID=MsG0780038494.01.T01;Parent=MsG0780038494.01;Name=MsG0780038494.01.T01;_AED=0.13;_eAED=0.13;_QI=0|0|0|0.5|1|1|4|0|435
Chr7 exon 47670226 47670369 47670226 ID=MsG0780038494.01.T01:exon:6134;Parent=MsG0780038494.01.T01
Chr7 exon 47669748 47669904 47669748 ID=MsG0780038494.01.T01:exon:6133;Parent=MsG0780038494.01.T01
Chr7 exon 47667935 47668097 47667935 ID=MsG0780038494.01.T01:exon:6132;Parent=MsG0780038494.01.T01
Chr7 exon 47665028 47665871 47665028 ID=MsG0780038494.01.T01:exon:6131;Parent=MsG0780038494.01.T01
Chr7 CDS 47670226 47670369 47670226 ID=MsG0780038494.01.T01:cds;Parent=MsG0780038494.01.T01
Chr7 CDS 47669748 47669904 47669748 ID=MsG0780038494.01.T01:cds;Parent=MsG0780038494.01.T01
Chr7 CDS 47667935 47668097 47667935 ID=MsG0780038494.01.T01:cds;Parent=MsG0780038494.01.T01
Chr7 CDS 47665028 47665871 47665028 ID=MsG0780038494.01.T01:cds;Parent=MsG0780038494.01.T01
Gene Sequence

>MsG0780038494.01.T01

ATGTGGGACATTAGTGGAGATGCGCATGAACCACTTGATGGTGTTGGAATTGAGTTATCAGAGTTGTCTTTGGATGAACCGGATTCGGAAGTTTATTTGTATCTTGATGATGGGAATGGAGGAGAGGAGATTGAGACAATTAATCCGTATCGTATCTTGATTTTTGAAATTTTTTCGTATCGGTTTATCGGTGCAGTATCGTATCCGTATTGTATCTCGTATCCGGGCTTCATAGCATGTCACTTTTATCTTACATGGGTGAAGTCTCTCACCTTAGACCATTTGCAATGGCATGTTGAAAGTTCAGATAACCGTCGAGAGAAGTTTGCTGGCTTGACTCTTGACGACGTCTTAGCCAATCAAAAGAGATTAGCAACTGCACCACCTAACCAACCATCACCTCCCAAGAATCGAACGCTTGTAGACACCATCAAAGAAGACGAGACCAACAAAAAAGACCGTAGATCTTGGAAAGCCTTCAAGGACAAGATTCGACTCAAGCGCACTGGCTCTACTTGGACATCAACAATTCATATTCCAACTTCAGATATTCCTATCCAAAATCCTAACAGTAGAAGTTTTTCTCAATTCGGTCGTCGCAACTCAGTCCGAATCCAAACTCACCACGACGACGCAAACATGTCAACCCAATCCATGACTCACCAAGACCTTGACCCATCGGAAGAGTCCAATGCTCCGGCCACTAGACCACAGTTCACTCGCCGCATGTCCACACGTCTCTCTGTCGAATCACCAGAAAACTCCTCTGGCGGAGGAAATCTCCGGCCGCAACTCTCACGAAGAAATTCCACCAATGTGTCATCAGAGCCGTTTCACCGAGGACGTGTAGTGACTTTTAGAGACAGCTTCGATGAGGATGATCCCGACGACGATGACAACAAGAAACCAGAGACAGGGAGGGCACTTTCGGCAAGGGAGGCAGTGGCAGCGCAGGAGGCGGCAGAAGCTGCTGCAGCAGCAGAGGTGGATGCTTCAGGAGGGCCTCCAATGATGATGTCACTAATGGACTTGCTGGAGGAGACTGATAGGGAGATGGGATTGGAAGGATCAAGGTATATATTGAGTGATGAAGAAGACTTCAACGATGATGAAGAATGTGAAGATGATGAGGATGGAGAAGGTGCCATGGAAGAGACTTGTTGTATTTGCATGGTGAAGCATAAGGGTGCTGCTTTTGCTCCTTGTGGCCACAGTTTCTGCAGGATGTGTTCAAGGGAGCTTATGGTGGCTAAGGGAAACTGTCCACTCTGCAACAATTTCATTGTAGAGATTCTCGAGATATTCTGA
Protein sequence

>MsG0780038494.01.T01

MWDISGDAHEPLDGVGIELSELSLDEPDSEVYLYLDDGNGGEEIETINPYRILIFEIFSYRFIGAVSYPYCISYPGFIACHFYLTWVKSLTLDHLQWHVESSDNRREKFAGLTLDDVLANQKRLATAPPNQPSPPKNRTLVDTIKEDETNKKDRRSWKAFKDKIRLKRTGSTWTSTIHIPTSDIPIQNPNSRSFSQFGRRNSVRIQTHHDDANMSTQSMTHQDLDPSEESNAPATRPQFTRRMSTRLSVESPENSSGGGNLRPQLSRRNSTNVSSEPFHRGRVVTFRDSFDEDDPDDDDNKKPETGRALSAREAVAAQEAAEAAAAAEVDASGGPPMMMSLMDLLEETDREMGLEGSRYILSDEEDFNDDEECEDDEDGEGAMEETCCICMVKHKGAAFAPCGHSFCRMCSRELMVAKGNCPLCNNFIVEILEIF*