AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015056.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015056.01.T01 MTR_3g062450 100.000 148 0 0 1 148 1 148 6.96e-110 308
MsG0380015056.01.T01 MTR_5g075580 98.649 148 2 0 1 148 1 148 1.52e-108 305
MsG0380015056.01.T01 MTR_7g116940 97.297 148 4 0 1 148 1 148 2.79e-107 302
MsG0380015056.01.T01 MTR_8g071040 93.919 148 9 0 1 148 1 148 2.87e-104 294
MsG0380015056.01.T01 MTR_7g116940 92.903 155 4 1 1 148 1 155 3.73e-104 294
MsG0380015056.01.T01 MTR_1g021150 91.892 148 12 0 1 148 1 148 6.13e-103 291
MsG0380015056.01.T01 MTR_4g073240 91.892 148 12 0 1 148 1 148 6.62e-103 291
MsG0380015056.01.T01 MTR_1g021150 92.063 126 10 0 23 148 31 156 2.57e-87 252
MsG0380015056.01.T01 MTR_5g075580 98.319 119 2 0 30 148 1 119 2.84e-86 248
MsG0380015056.01.T01 MTR_4g073240 92.437 119 9 0 30 148 1 119 6.80e-82 237
MsG0380015056.01.T01 MTR_7g116940 94.495 109 6 0 1 109 1 109 1.04e-72 214
MsG0380015056.01.T01 MTR_8g085690 51.034 145 71 0 2 146 23 167 7.38e-55 170
MsG0380015056.01.T01 MTR_4g073240 91.566 83 7 0 66 148 4 86 9.60e-54 164
MsG0380015056.01.T01 MTR_2g078010 48.276 145 75 0 4 148 8 152 6.57e-47 149
MsG0380015056.01.T01 MTR_4g108080 45.890 146 74 1 2 142 5 150 4.00e-45 145
MsG0380015056.01.T01 MTR_8g468530 45.205 146 75 1 2 142 21 166 6.62e-45 145
MsG0380015056.01.T01 MTR_2g078010 44.025 159 75 1 4 148 8 166 5.87e-43 140
MsG0380015056.01.T01 MTR_3g098780 48.611 144 72 2 5 146 6 149 5.01e-42 138
MsG0380015056.01.T01 MTR_2g078010 47.445 137 72 0 4 140 8 144 6.38e-42 136
MsG0380015056.01.T01 MTR_3g098780 48.611 144 72 2 5 146 30 173 1.17e-41 138
MsG0380015056.01.T01 MTR_4g108080 48.571 105 54 0 2 106 5 109 1.45e-34 117
MsG0380015056.01.T01 MTR_3g110110 40.136 147 84 3 5 147 7 153 4.49e-34 117
MsG0380015056.01.T01 MTR_4g076200 44.355 124 69 0 4 127 35 158 7.94e-34 117
MsG0380015056.01.T01 MTR_1g095510 45.669 127 68 1 3 128 43 169 6.58e-33 115
MsG0380015056.01.T01 MTR_4g076200 44.248 113 63 0 19 131 9 121 4.48e-32 111
MsG0380015056.01.T01 MTR_5g009020 41.406 128 75 0 4 131 35 162 4.93e-32 112
MsG0380015056.01.T01 MTR_4g108080 47.706 109 52 1 39 142 42 150 6.38e-32 111
MsG0380015056.01.T01 MTR_1g095510 48.598 107 55 0 22 128 9 115 7.39e-32 110
MsG0380015056.01.T01 MTR_2g078010 48.515 101 52 0 4 104 8 108 1.86e-31 108
MsG0380015056.01.T01 MTR_1g095510 48.649 111 56 1 3 112 43 153 1.81e-30 108
MsG0380015056.01.T01 MTR_4g094872 36.842 152 89 2 1 145 4 155 2.19e-30 107
MsG0380015056.01.T01 MTR_4g063490 35.821 134 72 2 15 134 18 151 2.94e-27 100
MsG0380015056.01.T01 MTR_5g016630 33.553 152 94 2 1 145 4 155 4.53e-27 99.4
MsG0380015056.01.T01 MTR_8g028920 37.398 123 75 2 26 146 25 147 1.01e-26 99.4
MsG0380015056.01.T01 MTR_5g019480 36.765 136 83 2 5 139 36 169 2.62e-26 98.2
MsG0380015056.01.T01 MTR_5g019480 36.765 136 83 2 5 139 33 166 2.83e-26 98.2
MsG0380015056.01.T01 MTR_5g019480 39.286 112 67 1 28 139 8 118 2.22e-25 94.4
MsG0380015056.01.T01 MTR_7g087590 34.965 143 93 0 4 146 13 155 3.36e-25 97.4
MsG0380015056.01.T01 MTR_8g098595 36.975 119 73 2 30 146 14 132 5.07e-25 94.4
MsG0380015056.01.T01 MTR_2g096690 34.028 144 81 2 15 144 18 161 9.14e-25 93.6
MsG0380015056.01.T01 MTR_8g028920 39.623 106 62 2 43 146 3 108 7.39e-24 90.9
MsG0380015056.01.T01 MTR_2g096690 37.600 125 64 2 15 125 18 142 2.33e-23 90.1
MsG0380015056.01.T01 MTR_4g106690 30.894 123 83 2 26 146 25 147 3.17e-22 87.8
MsG0380015056.01.T01 MTR_8g076490 38.835 103 61 2 1 102 15 116 4.83e-19 79.0
MsG0380015056.01.T01 MTR_4g121960 34.454 119 68 4 2 114 11 125 2.81e-18 79.3
MsG0380015056.01.T01 MTR_5g021260 36.893 103 63 2 1 102 15 116 7.77e-18 75.5
MsG0380015056.01.T01 MTR_7g451800 36.885 122 67 3 4 115 38 159 3.98e-17 76.6
MsG0380015056.01.T01 MTR_7g047620 36.885 122 67 3 4 115 38 159 3.98e-17 76.6
MsG0380015056.01.T01 MTR_7g047570 36.885 122 67 3 4 115 38 159 8.90e-17 75.5
MsG0380015056.01.T01 MTR_7g451770 36.885 122 67 3 4 115 38 159 8.90e-17 75.5
MsG0380015056.01.T01 MTR_2g096690 37.374 99 48 2 15 99 18 116 2.43e-16 70.5
MsG0380015056.01.T01 MTR_8g023380 32.479 117 70 3 4 115 8 120 6.80e-16 72.0
MsG0380015056.01.T01 MTR_4g088835 30.667 150 91 4 4 143 672 818 1.58e-14 70.1
MsG0380015056.01.T01 MTR_1g028540 71.739 46 13 0 102 147 83 128 1.71e-14 66.2
MsG0380015056.01.T01 MTR_7g023760 30.894 123 75 3 3 115 90 212 1.89e-14 68.9
MsG0380015056.01.T01 MTR_0274s0030 31.707 123 74 3 3 115 113 235 2.68e-14 68.9
MsG0380015056.01.T01 MTR_4g086440 32.787 122 72 3 4 115 37 158 4.49e-14 68.2
MsG0380015056.01.T01 MTR_4g020620 32.520 123 73 3 3 115 628 750 1.20e-13 67.4
MsG0380015056.01.T01 MTR_4g020620 32.520 123 73 3 3 115 570 692 1.22e-13 67.4
MsG0380015056.01.T01 MTR_2g013650 28.289 152 96 4 3 144 681 829 1.52e-13 67.0
MsG0380015056.01.T01 MTR_1g073600 26.606 109 66 2 33 140 25 120 9.88e-13 61.6
MsG0380015056.01.T01 MTR_2g079270 30.081 123 76 3 3 115 306 428 3.84e-12 63.2
MsG0380015056.01.T01 MTR_1g092460 28.455 123 78 3 3 115 176 298 3.96e-12 62.8
MsG0380015056.01.T01 MTR_1g092465 28.947 152 82 5 3 144 241 376 5.49e-12 62.4
MsG0380015056.01.T01 MTR_1g112730 29.508 122 76 3 4 115 856 977 7.94e-12 62.4
MsG0380015056.01.T01 MTR_2g018540 32.000 125 73 3 3 115 107 231 3.16e-11 60.1
MsG0380015056.01.T01 MTR_1g092440 33.696 92 51 3 34 115 411 502 3.27e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015056.01.T01 AT5G41700 96.622 148 5 0 1 148 1 148 2.45e-107 302
MsG0380015056.01.T01 AT5G41700 96.622 148 5 0 1 148 1 148 2.45e-107 302
MsG0380015056.01.T01 AT5G41700 96.622 148 5 0 1 148 1 148 2.45e-107 302
MsG0380015056.01.T01 AT1G64230 95.946 148 6 0 1 148 1 148 2.76e-107 302
MsG0380015056.01.T01 AT1G64230 95.946 148 6 0 1 148 1 148 2.76e-107 302
MsG0380015056.01.T01 AT5G53300 95.946 148 6 0 1 148 1 148 8.37e-107 301
MsG0380015056.01.T01 AT5G53300 95.946 148 6 0 1 148 1 148 8.37e-107 301
MsG0380015056.01.T01 AT5G53300 95.946 148 6 0 1 148 1 148 8.37e-107 301
MsG0380015056.01.T01 AT4G27960 95.270 148 7 0 1 148 1 148 1.73e-106 300
MsG0380015056.01.T01 AT4G27960 95.270 148 7 0 1 148 31 178 5.80e-106 300
MsG0380015056.01.T01 AT3G08690 93.919 148 9 0 1 148 1 148 6.12e-105 296
MsG0380015056.01.T01 AT3G08690 93.919 148 9 0 1 148 1 148 6.12e-105 296
MsG0380015056.01.T01 AT5G41700 95.302 149 6 1 1 148 1 149 1.57e-104 295
MsG0380015056.01.T01 AT1G64230 89.809 157 7 1 1 148 1 157 1.05e-102 291
MsG0380015056.01.T01 AT5G56150 89.189 148 16 0 1 148 1 148 1.26e-100 285
MsG0380015056.01.T01 AT2G16740 87.755 147 18 0 1 147 1 147 7.55e-99 281
MsG0380015056.01.T01 AT1G64230 74.211 190 7 1 1 148 1 190 2.91e-98 281
MsG0380015056.01.T01 AT1G64230 74.211 190 7 1 1 148 1 190 2.91e-98 281
MsG0380015056.01.T01 AT3G08700 79.195 149 30 1 1 148 1 149 3.19e-87 251
MsG0380015056.01.T01 AT3G08700 79.195 149 30 1 1 148 1 149 3.19e-87 251
MsG0380015056.01.T01 AT5G41700 96.154 104 4 0 1 104 1 104 1.37e-72 214
MsG0380015056.01.T01 AT5G53300 93.578 109 5 1 1 107 1 109 9.93e-72 211
MsG0380015056.01.T01 AT5G56150 87.379 103 13 0 1 103 1 103 3.66e-66 197
MsG0380015056.01.T01 AT3G13550 48.276 145 75 0 2 146 37 181 2.36e-53 167
MsG0380015056.01.T01 AT1G16890 49.655 145 73 0 4 148 8 152 3.27e-48 153
MsG0380015056.01.T01 AT1G78870 48.966 145 74 0 4 148 8 152 2.97e-47 150
MsG0380015056.01.T01 AT5G62540 49.254 134 68 0 2 135 5 138 7.74e-46 147
MsG0380015056.01.T01 AT1G16890 47.403 154 72 1 4 148 8 161 1.50e-45 146
MsG0380015056.01.T01 AT1G14400 46.575 146 73 1 2 142 5 150 1.65e-45 146
MsG0380015056.01.T01 AT1G14400 46.575 146 73 1 2 142 5 150 1.65e-45 146
MsG0380015056.01.T01 AT2G02760 45.890 146 74 1 2 142 5 150 3.63e-45 145
MsG0380015056.01.T01 AT2G02760 45.890 146 74 1 2 142 5 150 3.63e-45 145
MsG0380015056.01.T01 AT2G02760 45.890 146 74 1 2 142 5 150 3.63e-45 145
MsG0380015056.01.T01 AT2G02760 45.890 146 74 1 2 142 5 150 3.63e-45 145
MsG0380015056.01.T01 AT1G36340 48.966 145 73 1 2 146 9 152 3.82e-45 145
MsG0380015056.01.T01 AT1G36340 48.966 145 73 1 2 146 9 152 3.82e-45 145
MsG0380015056.01.T01 AT3G13550 50.000 114 57 0 2 115 37 150 2.99e-42 138
MsG0380015056.01.T01 AT1G16890 52.101 119 57 0 30 148 1 119 4.40e-41 134
MsG0380015056.01.T01 AT1G78870 52.101 119 57 0 30 148 1 119 7.68e-41 133
MsG0380015056.01.T01 AT5G50870 45.833 144 76 2 5 146 6 149 1.88e-39 132
MsG0380015056.01.T01 AT1G78870 51.667 120 57 1 30 148 1 120 4.60e-39 128
MsG0380015056.01.T01 AT2G32790 49.342 152 68 4 2 148 30 177 2.34e-36 123
MsG0380015056.01.T01 AT5G50870 42.581 155 76 3 5 146 6 160 4.83e-36 123
MsG0380015056.01.T01 AT3G24515 44.586 157 74 3 3 146 8 164 2.26e-35 126
MsG0380015056.01.T01 AT3G24515 46.721 122 61 1 29 146 68 189 1.00e-32 120
MsG0380015056.01.T01 AT5G25760 38.776 147 86 3 5 147 7 153 1.11e-32 113
MsG0380015056.01.T01 AT5G25760 38.776 147 86 3 5 147 7 153 1.11e-32 113
MsG0380015056.01.T01 AT1G78870 48.571 105 54 0 4 108 8 112 2.15e-32 111
MsG0380015056.01.T01 AT3G20060 42.742 124 71 0 4 127 39 162 7.39e-31 109
MsG0380015056.01.T01 AT1G50490 43.548 124 70 0 4 127 38 161 2.22e-30 108
MsG0380015056.01.T01 AT3G20060 43.636 110 62 0 22 131 12 121 2.79e-29 104
MsG0380015056.01.T01 AT2G46030 36.486 148 91 3 1 146 1 147 2.63e-28 103
MsG0380015056.01.T01 AT2G46030 36.486 148 91 3 1 146 1 147 2.63e-28 103
MsG0380015056.01.T01 AT3G57870 34.868 152 92 2 1 145 5 156 4.55e-28 102
MsG0380015056.01.T01 AT2G46030 36.486 148 91 3 1 146 73 219 6.56e-28 103
MsG0380015056.01.T01 AT5G05080 37.063 143 90 0 4 146 13 155 8.49e-28 103
MsG0380015056.01.T01 AT5G05080 37.063 143 90 0 4 146 13 155 8.49e-28 103
MsG0380015056.01.T01 AT5G05080 37.063 143 90 0 4 146 13 155 8.49e-28 103
MsG0380015056.01.T01 AT5G05080 37.063 143 90 0 4 146 13 155 8.49e-28 103
MsG0380015056.01.T01 AT2G46030 39.024 123 73 2 26 146 28 150 9.72e-28 102
MsG0380015056.01.T01 AT2G46030 39.024 123 73 2 26 146 28 150 9.72e-28 102
MsG0380015056.01.T01 AT3G55380 36.567 134 71 2 15 134 19 152 8.25e-27 99.0
MsG0380015056.01.T01 AT5G41340 38.211 123 74 2 26 146 25 147 1.03e-26 99.4
MsG0380015056.01.T01 AT1G63800 38.211 123 74 2 26 146 10 132 1.22e-26 98.6
MsG0380015056.01.T01 AT1G63800 38.211 123 74 2 26 146 25 147 1.33e-26 99.0
MsG0380015056.01.T01 AT5G59300 34.722 144 80 2 15 144 18 161 2.36e-25 95.1
MsG0380015056.01.T01 AT4G36800 35.036 137 84 3 5 139 34 167 4.14e-25 95.1
MsG0380015056.01.T01 AT4G36800 35.036 137 84 3 5 139 34 167 4.14e-25 95.1
MsG0380015056.01.T01 AT3G46460 34.028 144 81 2 15 144 18 161 4.22e-25 94.7
MsG0380015056.01.T01 AT5G41340 40.385 104 60 2 45 146 9 112 1.42e-23 90.1
MsG0380015056.01.T01 AT2G18600 35.036 137 84 3 5 139 35 168 2.65e-23 90.5
MsG0380015056.01.T01 AT2G18600 35.036 137 84 3 5 139 35 168 2.65e-23 90.5
MsG0380015056.01.T01 AT3G17000 36.975 119 65 4 2 114 12 126 2.08e-20 85.5
MsG0380015056.01.T01 AT3G55380 28.994 169 72 3 15 135 19 187 1.33e-19 81.3
MsG0380015056.01.T01 AT1G75440 38.889 108 60 3 1 107 15 117 8.36e-19 78.2
MsG0380015056.01.T01 AT1G45050 37.864 103 62 2 1 102 15 116 2.80e-18 77.0
MsG0380015056.01.T01 AT5G42990 38.835 103 61 2 1 102 15 116 4.38e-18 76.3
MsG0380015056.01.T01 AT1G17280 34.188 117 68 3 4 115 8 120 3.63e-17 75.5
MsG0380015056.01.T01 AT1G17280 34.188 117 68 3 4 115 8 120 3.63e-17 75.5
MsG0380015056.01.T01 AT1G17280 34.188 117 68 3 4 115 8 120 3.63e-17 75.5
MsG0380015056.01.T01 AT1G17280 34.188 117 68 3 4 115 8 120 3.63e-17 75.5
MsG0380015056.01.T01 AT1G17280 34.188 117 68 3 4 115 8 120 3.63e-17 75.5
MsG0380015056.01.T01 AT1G17280 34.188 117 68 3 4 115 8 120 3.63e-17 75.5
MsG0380015056.01.T01 AT1G17280 34.188 117 68 3 4 115 8 120 3.63e-17 75.5
MsG0380015056.01.T01 AT1G17280 34.188 117 68 3 4 115 8 120 3.63e-17 75.5
MsG0380015056.01.T01 AT4G36410 35.185 108 64 3 1 107 15 117 3.70e-17 73.9
MsG0380015056.01.T01 AT5G50430 34.188 117 68 3 4 115 8 120 4.45e-17 75.5
MsG0380015056.01.T01 AT5G50430 34.188 117 68 3 4 115 8 120 4.45e-17 75.5
MsG0380015056.01.T01 AT3G46460 30.631 111 64 1 47 144 9 119 1.19e-16 71.6
MsG0380015056.01.T01 AT3G46460 30.631 111 64 1 47 144 9 119 1.19e-16 71.6
MsG0380015056.01.T01 AT1G17280 31.707 123 69 3 4 115 8 126 8.55e-16 72.0
MsG0380015056.01.T01 AT3G15355 28.289 152 96 4 3 144 334 482 1.17e-11 61.6
MsG0380015056.01.T01 AT1G45050 34.831 89 56 2 1 88 15 102 1.27e-11 58.5
MsG0380015056.01.T01 AT1G53025 30.328 122 75 3 4 115 274 395 2.74e-11 60.5
MsG0380015056.01.T01 AT1G53025 30.328 122 75 3 4 115 274 395 3.07e-11 60.5
MsG0380015056.01.T01 AT1G53023 31.148 122 74 3 4 115 60 181 6.51e-11 59.3

Find 79 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATACTGCAGGTTGCATTT+AGG 0.246319 3:-64585550 MsG0380015056.01.T01:intron
CTTCCATTGCTGTTGATGTT+TGG 0.284673 3:+64585512 None:intergenic
TTGTACATATGTGCAATTTC+AGG 0.297625 3:+64584717 None:intergenic
TTCCATTGCTGTTGATGTTT+GGG 0.299216 3:+64585513 None:intergenic
AAACGAAAGAAGGGATAATA+AGG 0.306192 3:+64587460 None:intergenic
AATACCTTTGGTGGCTTGAA+TGG 0.326318 3:+64586817 None:intergenic
CACAAGCGGGTCATCGGGAT+TGG 0.353907 3:+64584740 None:intergenic
ATCTTCTCTGTTTGTCGTAA+TGG 0.356690 3:+64587536 None:intergenic
GTGAAAATTGTTAAGACATC+TGG 0.358055 3:-64584495 MsG0380015056.01.T01:three_prime_UTR
TATTTGTCTCGACATTCTTA+AGG 0.371764 3:-64585489 MsG0380015056.01.T01:CDS
GTCAATCTGCTCATTGTTGA+CGG 0.386180 3:-64584766 MsG0380015056.01.T01:CDS
GCGTGCGGTGGCTTCATACT+TGG 0.404055 3:+64584683 None:intergenic
TTCAACAGCGAAGGAGGAAT+TGG 0.405898 3:+64584630 None:intergenic
ATTAGGGTTGAAATTGAAAA+GGG 0.420801 3:+64587410 None:intergenic
TTCATTTATCATCGCTGCTT+GGG 0.423487 3:+64584442 None:intergenic
TGTCGTAATGGAATGTGTTT+GGG 0.427923 3:+64587548 None:intergenic
TTGTCGTAATGGAATGTGTT+TGG 0.428517 3:+64587547 None:intergenic
ACAAGCGGGTCATCGGGATT+GGG 0.433760 3:+64584741 None:intergenic
AGGAAGAAGAAAACGAAAGA+AGG 0.435287 3:+64587450 None:intergenic
GAGAATGAGAGAAAAGGAAC+AGG 0.447969 3:+64587486 None:intergenic
AGGAGAGAGAATGAGAGAAA+AGG 0.449498 3:+64587480 None:intergenic
TCAGGCACAAGCGGGTCATC+GGG 0.450503 3:+64584735 None:intergenic
CTAAAATCAAACCTTGGAAA+TGG 0.452900 3:+64585445 None:intergenic
ATGAAGCCACCGCACGCAGC+TGG 0.456609 3:-64584677 MsG0380015056.01.T01:CDS
GGAAGAAGAAAACGAAAGAA+GGG 0.456833 3:+64587451 None:intergenic
TAGGGTTTCAATACCTTTGG+TGG 0.458014 3:+64586808 None:intergenic
GATTAGGGTTGAAATTGAAA+AGG 0.459907 3:+64587409 None:intergenic
TTCAGGCACAAGCGGGTCAT+CGG 0.461878 3:+64584734 None:intergenic
TTTCATTTATCATCGCTGCT+TGG 0.470863 3:+64584441 None:intergenic
AACAAACATAATTCAATCTC+AGG 0.474332 3:+64584370 None:intergenic
TGGAACTCAACCATGGCAAT+GGG 0.477736 3:-64584534 MsG0380015056.01.T01:three_prime_UTR
GCAGGTTGCATTTAGGACTA+AGG 0.478226 3:-64585543 MsG0380015056.01.T01:intron
ACCTTGGAAATGGTCAGTGC+AGG 0.479512 3:+64585455 None:intergenic
TCATTGGCAAGCAACAATCA+TGG 0.479981 3:-64586905 MsG0380015056.01.T01:CDS
TGGCTGAGGACATGTTTCAT+TGG 0.495052 3:-64586921 MsG0380015056.01.T01:CDS
GGTGGCTTGAATGGATAATC+CGG 0.498996 3:+64586826 None:intergenic
CATTGCTGTTGATGTTTGGG+TGG 0.507557 3:+64585516 None:intergenic
CATTGGCAAGCAACAATCAT+GGG 0.510542 3:-64586904 MsG0380015056.01.T01:CDS
CCCTGCACTGACCATTTCCA+AGG 0.514922 3:-64585456 MsG0380015056.01.T01:intron
CCACCAACATCATGCAGTGC+AGG 0.515198 3:-64587303 MsG0380015056.01.T01:intron
TCGCTCCTTTGATTTGAGCA+TGG 0.518503 3:-64587370 MsG0380015056.01.T01:exon
ATGGAACTCAACCATGGCAA+TGG 0.520736 3:-64584535 MsG0380015056.01.T01:three_prime_UTR
CCTGCACTGCATGATGTTGG+TGG 0.521666 3:+64587303 None:intergenic
AAAACACACCACCAGCATAA+GGG 0.532990 3:+64586869 None:intergenic
ATTTGAGCATGGCATCGAAA+CGG 0.533369 3:-64587359 MsG0380015056.01.T01:exon
CTGTGTCCAGCTGCGTGCGG+TGG 0.538680 3:+64584671 None:intergenic
CACATATGTACAAGACTGAC+AGG 0.541007 3:-64584707 MsG0380015056.01.T01:CDS
CGATGCCATGCTCAAATCAA+AGG 0.543280 3:+64587365 None:intergenic
CCTGCTGATAGCCCTTATGC+TGG 0.566650 3:-64586880 MsG0380015056.01.T01:CDS
CCAGCATAAGGGCTATCAGC+AGG 0.567868 3:+64586880 None:intergenic
TTACATAAAACATAAATGCA+CGG 0.568066 3:+64584602 None:intergenic
CACCCAAACATCAACAGCAA+TGG 0.573454 3:-64585515 MsG0380015056.01.T01:CDS
TGAAACATGTCCTCAGCCAC+AGG 0.579671 3:+64586925 None:intergenic
GTGCAATTTCAGGCACAAGC+GGG 0.582074 3:+64584727 None:intergenic
TCACCTGCACTGCATGATGT+TGG 0.588406 3:+64587300 None:intergenic
CCTTGGAAATGGTCAGTGCA+GGG 0.590131 3:+64585456 None:intergenic
ATAATCAATTCCCATTGCCA+TGG 0.591438 3:+64584524 None:intergenic
GTTGCATTCAACAGCGAAGG+AGG 0.594760 3:+64584624 None:intergenic
CTGGACACAGAAGTATGCCA+TGG 0.597546 3:-64584658 MsG0380015056.01.T01:CDS
GCAAATCCTTGAGCTCCTTG+AGG 0.601494 3:+64587334 None:intergenic
GGGTTTGATTGAAATTGAAG+AGG 0.605266 3:+64587430 None:intergenic
ACGGATCCTCAAGGAGCTCA+AGG 0.606874 3:-64587340 MsG0380015056.01.T01:CDS
AGGAGGAATTGGTCATCCCA+TGG 0.622867 3:+64584641 None:intergenic
TCGACATTCTTAAGGAACAA+TGG 0.626316 3:-64585481 MsG0380015056.01.T01:CDS
GGAGCTCAAGGATTTGCAGA+AGG 0.628349 3:-64587328 MsG0380015056.01.T01:CDS
GCTGATAGCCCTTATGCTGG+TGG 0.629848 3:-64586877 MsG0380015056.01.T01:CDS
TTTGTTATTTATTGTCAACA+TGG 0.637302 3:-64584554 MsG0380015056.01.T01:three_prime_UTR
ACGGTTGCATTCAACAGCGA+AGG 0.638315 3:+64584621 None:intergenic
TGAGAGAAAAGGAACAGGCA+AGG 0.642811 3:+64587491 None:intergenic
GAAAATTGTAGTTACGAACA+TGG 0.643887 3:-64584422 MsG0380015056.01.T01:three_prime_UTR
GGCATCGAAACGGATCCTCA+AGG 0.650007 3:-64587349 MsG0380015056.01.T01:CDS
TTATCCATTCAAGCCACCAA+AGG 0.651286 3:-64586821 MsG0380015056.01.T01:intron
TGGACACAGAAGTATGCCAT+GGG 0.652544 3:-64584657 MsG0380015056.01.T01:CDS
TGTGCAATTTCAGGCACAAG+CGG 0.661456 3:+64584726 None:intergenic
AGGAACAATGAAACATCCAC+AGG 0.663163 3:+64584390 None:intergenic
AACATGGTGATTATTGCCTG+TGG 0.665031 3:-64584406 MsG0380015056.01.T01:three_prime_UTR
GGCTTGAATGGATAATCCGG+AGG 0.679274 3:+64586829 None:intergenic
GTCAACATGGAACTCAACCA+TGG 0.686063 3:-64584541 MsG0380015056.01.T01:three_prime_UTR
CTTCTGTGTCCAGCTGCGTG+CGG 0.688818 3:+64584668 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATAATTAATGATTTATATA+AGG - Chr3:64586507-64586526 MsG0380015056.01.T01:intron 10.0%
!! TAAATGCTAATTATTATATT+TGG - Chr3:64585532-64585551 MsG0380015056.01.T01:CDS 10.0%
!! TATATGATAAAAGAAAAAAA+GGG + Chr3:64584664-64584683 None:intergenic 10.0%
!! AAAAATCATAAAACAACAAA+AGG + Chr3:64584782-64584801 None:intergenic 15.0%
!! AAAATCATAAAACAACAAAA+GGG + Chr3:64584781-64584800 None:intergenic 15.0%
!! CTATATGATAAAAGAAAAAA+AGG + Chr3:64584665-64584684 None:intergenic 15.0%
!! TGAAAAAAAAAAATGATCAT+TGG - Chr3:64585927-64585946 MsG0380015056.01.T01:intron 15.0%
!! TGAAAACAGAAAAAATAATA+TGG + Chr3:64585400-64585419 None:intergenic 15.0%
!!! TTTGAAAGTTTTATTCTTTT+TGG - Chr3:64585222-64585241 MsG0380015056.01.T01:intron 15.0%
!!! TTTTTATCAATGATTTGTTA+TGG - Chr3:64584797-64584816 MsG0380015056.01.T01:intron 15.0%
!!! TTTTTTTTTCAATTAACACA+GGG + Chr3:64585918-64585937 None:intergenic 15.0%
!!! TTTTTTTTTTCAATTAACAC+AGG + Chr3:64585919-64585938 None:intergenic 15.0%
!! AAAAAAAAATGATCATTGGT+TGG - Chr3:64585931-64585950 MsG0380015056.01.T01:intron 20.0%
!! AATTATAGACATGAAACTTT+AGG - Chr3:64584860-64584879 MsG0380015056.01.T01:intron 20.0%
!! AGCTAAAAATCAAAACTTTA+AGG + Chr3:64584700-64584719 None:intergenic 20.0%
!! GCTAAAAATCAAAACTTTAA+GGG + Chr3:64584699-64584718 None:intergenic 20.0%
!! TAGTATAAATAAGAGATTGT+AGG + Chr3:64585717-64585736 None:intergenic 20.0%
!! TTACATAAAACATAAATGCA+CGG + Chr3:64587318-64587337 None:intergenic 20.0%
!! TTTGTTAATTGTTTGGAAAA+TGG - Chr3:64586546-64586565 MsG0380015056.01.T01:intron 20.0%
!!! AAATCATGAATCATTTTCTT+GGG + Chr3:64586801-64586820 None:intergenic 20.0%
!!! ATAATTTGTTGAGATTTGTT+TGG - Chr3:64585163-64585182 MsG0380015056.01.T01:intron 20.0%
!!! ATTTTTAAAAAATCGCTATG+AGG - Chr3:64585431-64585450 MsG0380015056.01.T01:intron 20.0%
!!! TTTGTTATTTATTGTCAACA+TGG - Chr3:64587363-64587382 MsG0380015056.01.T01:exon 20.0%
! AACAAACATAATTCAATCTC+AGG + Chr3:64587550-64587569 None:intergenic 25.0%
! ATTAGGGTTGAAATTGAAAA+GGG + Chr3:64584510-64584529 None:intergenic 25.0%
! CATGTTAAAATCAATGAATC+AGG - Chr3:64586606-64586625 MsG0380015056.01.T01:intron 25.0%
! TACACTTTAATCAATGAATC+AGG - Chr3:64586573-64586592 MsG0380015056.01.T01:intron 25.0%
! TATGTTATGTTTATGAAGCT+AGG - Chr3:64584903-64584922 MsG0380015056.01.T01:intron 25.0%
! TTGAGATAATTAAAGAGCAA+GGG + Chr3:64585754-64585773 None:intergenic 25.0%
!! AAGTTGATCATATGATTGTT+AGG - Chr3:64586987-64587006 MsG0380015056.01.T01:intron 25.0%
!! ATCCTAACATTCACTATTTT+AGG - Chr3:64587121-64587140 MsG0380015056.01.T01:intron 25.0%
!! CAAATCATGAATCATTTTCT+TGG + Chr3:64586802-64586821 None:intergenic 25.0%
!! TTATGGATCTGTTATTTGAA+GGG - Chr3:64584814-64584833 MsG0380015056.01.T01:intron 25.0%
!!! ATGATGATGTTTTGTGTTTT+AGG - Chr3:64584968-64584987 MsG0380015056.01.T01:intron 25.0%
!!! GAAGAACTGTGATTTTTTTT+TGG - Chr3:64586848-64586867 MsG0380015056.01.T01:CDS 25.0%
AAAAATAATATGGTCCCTGT+CGG + Chr3:64585390-64585409 None:intergenic 30.0%
AAACGAAAGAAGGGATAATA+AGG + Chr3:64584460-64584479 None:intergenic 30.0%
AACATAAAACTATCTTCAGG+TGG + Chr3:64586199-64586218 None:intergenic 30.0%
ACTATTATCAAGTCCTTACT+TGG + Chr3:64585681-64585700 None:intergenic 30.0%
AGATCAGTGGAAAACAAAAA+AGG + Chr3:64585980-64585999 None:intergenic 30.0%
CAACAACTAAAATCAAACCT+TGG + Chr3:64586481-64586500 None:intergenic 30.0%
CACCTAAAATAGTGAATGTT+AGG + Chr3:64587126-64587145 None:intergenic 30.0%
CCTAACATAAAACTATCTTC+AGG + Chr3:64586202-64586221 None:intergenic 30.0%
CTAAAATCAAACCTTGGAAA+TGG + Chr3:64586475-64586494 None:intergenic 30.0%
CTTGAGATAATTAAAGAGCA+AGG + Chr3:64585755-64585774 None:intergenic 30.0%
GAAAATTGTAGTTACGAACA+TGG - Chr3:64587495-64587514 MsG0380015056.01.T01:five_prime_UTR 30.0%
GATTAGGGTTGAAATTGAAA+AGG + Chr3:64584511-64584530 None:intergenic 30.0%
GTCAATATTAACAACATCCA+CGG + Chr3:64586170-64586189 None:intergenic 30.0%
GTGAAAATTGTTAAGACATC+TGG - Chr3:64587422-64587441 MsG0380015056.01.T01:five_prime_UTR 30.0%
GTTTGCAAACTCAATTAAAC+CGG + Chr3:64586292-64586311 None:intergenic 30.0%
TATTTGTCTCGACATTCTTA+AGG - Chr3:64586428-64586447 MsG0380015056.01.T01:intron 30.0%
TGAGATAATTAAAGAGCAAG+GGG + Chr3:64585753-64585772 None:intergenic 30.0%
TTGTACATATGTGCAATTTC+AGG + Chr3:64587203-64587222 None:intergenic 30.0%
TTTAAAAAATCGCTATGAGG+AGG - Chr3:64585434-64585453 MsG0380015056.01.T01:intron 30.0%
TTTGCAAACATCTTGTACTT+TGG - Chr3:64586303-64586322 MsG0380015056.01.T01:intron 30.0%
TTTGTTGATGTCATTCTTGT+GGG - Chr3:64586740-64586759 MsG0380015056.01.T01:intron 30.0%
! AGCTTGATCGATAATTTTGA+CGG + Chr3:64585560-64585579 None:intergenic 30.0%
! GTTATGGATCTGTTATTTGA+AGG - Chr3:64584813-64584832 MsG0380015056.01.T01:intron 30.0%
! TTTTCTTTTTCTTGCTGATG+AGG - Chr3:64586226-64586245 MsG0380015056.01.T01:intron 30.0%
! TTTTGTTGATGTCATTCTTG+TGG - Chr3:64586739-64586758 MsG0380015056.01.T01:intron 30.0%
!! GACAAGCTTTGTTAATTGTT+TGG - Chr3:64586539-64586558 MsG0380015056.01.T01:intron 30.0%
!! TGTTATTTGAAGGGTTTTTG+AGG - Chr3:64584823-64584842 MsG0380015056.01.T01:intron 30.0%
!!! CCTGAAGATAGTTTTATGTT+AGG - Chr3:64586199-64586218 MsG0380015056.01.T01:intron 30.0%
AAAATAATATGGTCCCTGTC+GGG + Chr3:64585389-64585408 None:intergenic 35.0%
AACAACAACATTCCAAATGC+AGG + Chr3:64587061-64587080 None:intergenic 35.0%
ACACTCACAAACTATATCTC+AGG + Chr3:64586958-64586977 None:intergenic 35.0%
ACAGATCATACATACAAGCT+AGG + Chr3:64585131-64585150 None:intergenic 35.0%
AGGAAGAAGAAAACGAAAGA+AGG + Chr3:64584470-64584489 None:intergenic 35.0%
ATAATCAATTCCCATTGCCA+TGG + Chr3:64587396-64587415 None:intergenic 35.0%
ATAATTAAAGAGCAAGGGGA+TGG + Chr3:64585749-64585768 None:intergenic 35.0%
ATCTTCTCTGTTTGTCGTAA+TGG + Chr3:64584384-64584403 None:intergenic 35.0%
CAGATCATACATACAAGCTA+GGG + Chr3:64585130-64585149 None:intergenic 35.0%
CCAAGTACAGTATATTTGTC+CGG - Chr3:64586270-64586289 MsG0380015056.01.T01:intron 35.0%
GGAAGAAGAAAACGAAAGAA+GGG + Chr3:64584469-64584488 None:intergenic 35.0%
GGGTTTGATTGAAATTGAAG+AGG + Chr3:64584490-64584509 None:intergenic 35.0%
TATTTGTGTTGCAACTTGCA+AGG - Chr3:64585828-64585847 MsG0380015056.01.T01:intron 35.0%
TCGACATTCTTAAGGAACAA+TGG - Chr3:64586436-64586455 MsG0380015056.01.T01:intron 35.0%
TTATTGTCTTGCAATACTGC+AGG - Chr3:64586356-64586375 MsG0380015056.01.T01:intron 35.0%
TTCATTTATCATCGCTGCTT+GGG + Chr3:64587478-64587497 None:intergenic 35.0%
TTTCATTTATCATCGCTGCT+TGG + Chr3:64587479-64587498 None:intergenic 35.0%
! GGTTTCAATTCATTTTCCTC+CGG - Chr3:64585072-64585091 MsG0380015056.01.T01:intron 35.0%
! GTTGTTGTTCTTATGTGTCA+TGG - Chr3:64587072-64587091 MsG0380015056.01.T01:intron 35.0%
! TGTCGTAATGGAATGTGTTT+GGG + Chr3:64584372-64584391 None:intergenic 35.0%
! TTCCATTGCTGTTGATGTTT+GGG + Chr3:64586407-64586426 None:intergenic 35.0%
! TTGTCGTAATGGAATGTGTT+TGG + Chr3:64584373-64584392 None:intergenic 35.0%
!! GCTTGATCGATAATTTTGAC+GGG + Chr3:64585559-64585578 None:intergenic 35.0%
AAAAACACACCACCAGCATA+AGG + Chr3:64585052-64585071 None:intergenic 40.0%
AAAACACACCACCAGCATAA+GGG + Chr3:64585051-64585070 None:intergenic 40.0%
AAATAACCTGAGGCTTCTTG+AGG + Chr3:64585813-64585832 None:intergenic 40.0%
AACATGGTGATTATTGCCTG+TGG - Chr3:64587511-64587530 MsG0380015056.01.T01:five_prime_UTR 40.0%
AACTGGGACAAAAAGATCAG+TGG + Chr3:64585993-64586012 None:intergenic 40.0%
ACAACATCCACGGATTTCAT+TGG + Chr3:64586160-64586179 None:intergenic 40.0%
AGAGAGAGAGAGAGAGATTA+GGG + Chr3:64584526-64584545 None:intergenic 40.0%
AGCTAGGGTTTCAATACCTT+TGG + Chr3:64585115-64585134 None:intergenic 40.0%
AGGAACAATGAAACATCCAC+AGG + Chr3:64587530-64587549 None:intergenic 40.0%
AGGAGAGAGAATGAGAGAAA+AGG + Chr3:64584440-64584459 None:intergenic 40.0%
ATCTCAAGCAAACAAGCTAG+TGG - Chr3:64585767-64585786 MsG0380015056.01.T01:intron 40.0%
CAAATGCAGGTCGTTAAACA+CGG + Chr3:64587048-64587067 None:intergenic 40.0%
CAACAGTTTGCAATACACTC+AGG + Chr3:64585887-64585906 None:intergenic 40.0%
CAATACTGCAGGTTGCATTT+AGG - Chr3:64586367-64586386 MsG0380015056.01.T01:intron 40.0%
CACATATGTACAAGACTGAC+AGG - Chr3:64587210-64587229 MsG0380015056.01.T01:intron 40.0%
CATAAAATCGATCCTCTGCA+AGG - Chr3:64585650-64585669 MsG0380015056.01.T01:intron 40.0%
CATTGGCAAGCAACAATCAT+GGG - Chr3:64585013-64585032 MsG0380015056.01.T01:intron 40.0%
CCGGACAAATATACTGTACT+TGG + Chr3:64586273-64586292 None:intergenic 40.0%
GAGAATGAGAGAAAAGGAAC+AGG + Chr3:64584434-64584453 None:intergenic 40.0%
GCAATGAAAGCTTTGCATCT+TGG + Chr3:64585508-64585527 None:intergenic 40.0%
GTCAATCTGCTCATTGTTGA+CGG - Chr3:64587151-64587170 MsG0380015056.01.T01:intron 40.0%
GTTGCAACACAAATAACCTG+AGG + Chr3:64585823-64585842 None:intergenic 40.0%
TAGGGTTTCAATACCTTTGG+TGG + Chr3:64585112-64585131 None:intergenic 40.0%
TCATTGGCAAGCAACAATCA+TGG - Chr3:64585012-64585031 MsG0380015056.01.T01:intron 40.0%
TCTCAAACCAATGAAATCCG+TGG - Chr3:64586150-64586169 MsG0380015056.01.T01:intron 40.0%
TCTCAAGCAAACAAGCTAGT+GGG - Chr3:64585768-64585787 MsG0380015056.01.T01:intron 40.0%
TTATCCATTCAAGCCACCAA+AGG - Chr3:64585096-64585115 MsG0380015056.01.T01:intron 40.0%
TTGATGTCATTCTTGTGGGA+AGG - Chr3:64586744-64586763 MsG0380015056.01.T01:intron 40.0%
! AATACCTTTGGTGGCTTGAA+TGG + Chr3:64585103-64585122 None:intergenic 40.0%
! ATTTGAGCATGGCATCGAAA+CGG - Chr3:64584558-64584577 MsG0380015056.01.T01:three_prime_UTR 40.0%
! CTTCCATTGCTGTTGATGTT+TGG + Chr3:64586408-64586427 None:intergenic 40.0%
!! CTTGCAGAGGATCGATTTTA+TGG + Chr3:64585652-64585671 None:intergenic 40.0%
!! GTTTTGTGTTTTAGGTCCTG+TGG - Chr3:64584976-64584995 MsG0380015056.01.T01:intron 40.0%
!! TTATGCTGGTGGTGTGTTTT+TGG - Chr3:64585051-64585070 MsG0380015056.01.T01:intron 40.0%
!!! GAAGGGTTTTTGAGGTGATT+TGG - Chr3:64584831-64584850 MsG0380015056.01.T01:intron 40.0%
!!! TGTTTTGAGGGGTGAATGTT+TGG - Chr3:64585351-64585370 MsG0380015056.01.T01:intron 40.0%
AGACGACAATTGTGAACGTG+TGG + Chr3:64586042-64586061 None:intergenic 45.0%
ATGGAACTCAACCATGGCAA+TGG - Chr3:64587382-64587401 MsG0380015056.01.T01:five_prime_UTR 45.0%
CACCCAAACATCAACAGCAA+TGG - Chr3:64586402-64586421 MsG0380015056.01.T01:intron 45.0%
CGATGCCATGCTCAAATCAA+AGG + Chr3:64584555-64584574 None:intergenic 45.0%
CGTGTTTAACGACCTGCATT+TGG - Chr3:64587046-64587065 MsG0380015056.01.T01:intron 45.0%
CTCAAGCAAACAAGCTAGTG+GGG - Chr3:64585769-64585788 MsG0380015056.01.T01:intron 45.0%
GAGAGAGAGAGAGAGAGATT+AGG + Chr3:64584527-64584546 None:intergenic 45.0%
GGTGGCTTGAATGGATAATC+CGG + Chr3:64585094-64585113 None:intergenic 45.0%
GTCAACATGGAACTCAACCA+TGG - Chr3:64587376-64587395 MsG0380015056.01.T01:five_prime_UTR 45.0%
GTCGTGGTATTAAAGCGCAT+CGG + Chr3:64585484-64585503 None:intergenic 45.0%
TCTTGAGGCAGGTTTATGCT+AGG + Chr3:64585798-64585817 None:intergenic 45.0%
TGAGAGAAAAGGAACAGGCA+AGG + Chr3:64584429-64584448 None:intergenic 45.0%
TGGAACTCAACCATGGCAAT+GGG - Chr3:64587383-64587402 MsG0380015056.01.T01:five_prime_UTR 45.0%
TGGCTGAGGACATGTTTCAT+TGG - Chr3:64584996-64585015 MsG0380015056.01.T01:intron 45.0%
TGTGCAATTTCAGGCACAAG+CGG + Chr3:64587194-64587213 None:intergenic 45.0%
TTCAACAGCGAAGGAGGAAT+TGG + Chr3:64587290-64587309 None:intergenic 45.0%
TTGCAATACACTCAGGCTCT+CGG + Chr3:64585880-64585899 None:intergenic 45.0%
! AAGCAACCTTTTCCTGAAGG+CGG + Chr3:64585583-64585602 None:intergenic 45.0%
! CATTGCTGTTGATGTTTGGG+TGG + Chr3:64586404-64586423 None:intergenic 45.0%
! GAGAAGCAACCTTTTCCTGA+AGG + Chr3:64585586-64585605 None:intergenic 45.0%
! GCAGGTTGCATTTAGGACTA+AGG - Chr3:64586374-64586393 MsG0380015056.01.T01:intron 45.0%
! TGGACACAGAAGTATGCCAT+GGG - Chr3:64587260-64587279 MsG0380015056.01.T01:intron 45.0%
!! TCGCTCCTTTGATTTGAGCA+TGG - Chr3:64584547-64584566 MsG0380015056.01.T01:three_prime_UTR 45.0%
!!! ATGATTTATTTTTAAAATTA+TGG - Chr3:64584752-64584771 MsG0380015056.01.T01:CDS 5.0%
AAATCTATCTAGCCGCGCAG+TGG - Chr3:64585321-64585340 MsG0380015056.01.T01:intron 50.0%
ACCTTACCTCAATGCCGAAG+TGG - Chr3:64585854-64585873 MsG0380015056.01.T01:intron 50.0%
ACCTTGGAAATGGTCAGTGC+AGG + Chr3:64586465-64586484 None:intergenic 50.0%
ACGGTTGCATTCAACAGCGA+AGG + Chr3:64587299-64587318 None:intergenic 50.0%
AGGAGGAATTGGTCATCCCA+TGG + Chr3:64587279-64587298 None:intergenic 50.0%
CCTTGGAAATGGTCAGTGCA+GGG + Chr3:64586464-64586483 None:intergenic 50.0%
CTATGAGGAGGTTCGAACCA+TGG - Chr3:64585446-64585465 MsG0380015056.01.T01:intron 50.0%
CTGCAAGGTCGTACCAAGTA+AGG - Chr3:64585665-64585684 MsG0380015056.01.T01:intron 50.0%
GCAAATCCTTGAGCTCCTTG+AGG + Chr3:64584586-64584605 None:intergenic 50.0%
GCATGCATGCAAGCGAAACT+GGG + Chr3:64586009-64586028 None:intergenic 50.0%
GGAGCTCAAGGATTTGCAGA+AGG - Chr3:64584589-64584608 MsG0380015056.01.T01:three_prime_UTR 50.0%
GGCTTGAATGGATAATCCGG+AGG + Chr3:64585091-64585110 None:intergenic 50.0%
GTGCAATTTCAGGCACAAGC+GGG + Chr3:64587193-64587212 None:intergenic 50.0%
GTTGCATTCAACAGCGAAGG+AGG + Chr3:64587296-64587315 None:intergenic 50.0%
TACTTGGTACGACCTTGCAG+AGG + Chr3:64585665-64585684 None:intergenic 50.0%
TCACCTGCACTGCATGATGT+TGG + Chr3:64584620-64584639 None:intergenic 50.0%
TGAAACATGTCCTCAGCCAC+AGG + Chr3:64584995-64585014 None:intergenic 50.0%
TGCATGCATGCAAGCGAAAC+TGG + Chr3:64586010-64586029 None:intergenic 50.0%
TTGAGGGGTGAATGTTTGGC+AGG - Chr3:64585355-64585374 MsG0380015056.01.T01:intron 50.0%
! CTGGACACAGAAGTATGCCA+TGG - Chr3:64587259-64587278 MsG0380015056.01.T01:intron 50.0%
!! TGTTTTAGGTCCTGTGGCTG+AGG - Chr3:64584982-64585001 MsG0380015056.01.T01:intron 50.0%
AACCTGAGGCTTCTTGAGGC+AGG + Chr3:64585809-64585828 None:intergenic 55.0%
AACCTGCCTCAAGAAGCCTC+AGG - Chr3:64585804-64585823 MsG0380015056.01.T01:intron 55.0%
ACAAGCGGGTCATCGGGATT+GGG + Chr3:64587179-64587198 None:intergenic 55.0%
ACGGATCCTCAAGGAGCTCA+AGG - Chr3:64584577-64584596 MsG0380015056.01.T01:three_prime_UTR 55.0%
AGAGCAAGGGGATGGACGAA+TGG + Chr3:64585741-64585760 None:intergenic 55.0%
AGCTTTGCATCTTGGCGTCG+TGG + Chr3:64585500-64585519 None:intergenic 55.0%
ATCGATCAAGCTCCGCCTTC+AGG - Chr3:64585568-64585587 MsG0380015056.01.T01:intron 55.0%
CAAGCTCCGCCTTCAGGAAA+AGG - Chr3:64585574-64585593 MsG0380015056.01.T01:intron 55.0%
CCACCAACATCATGCAGTGC+AGG - Chr3:64584614-64584633 MsG0380015056.01.T01:three_prime_UTR 55.0%
CCAGCATAAGGGCTATCAGC+AGG + Chr3:64585040-64585059 None:intergenic 55.0%
CCTGCACTGCATGATGTTGG+TGG + Chr3:64584617-64584636 None:intergenic 55.0%
CCTGCTGATAGCCCTTATGC+TGG - Chr3:64585037-64585056 MsG0380015056.01.T01:intron 55.0%
GAGCAAGGGGATGGACGAAT+GGG + Chr3:64585740-64585759 None:intergenic 55.0%
GCTGATAGCCCTTATGCTGG+TGG - Chr3:64585040-64585059 MsG0380015056.01.T01:intron 55.0%
TTCAGGCACAAGCGGGTCAT+CGG + Chr3:64587186-64587205 None:intergenic 55.0%
! ATCGGTTTACCTCGCGTCCA+TGG + Chr3:64585466-64585485 None:intergenic 55.0%
! CCCTGCACTGACCATTTCCA+AGG - Chr3:64586461-64586480 MsG0380015056.01.T01:intron 55.0%
! GCCACTTCGGCATTGAGGTA+AGG + Chr3:64585858-64585877 None:intergenic 55.0%
! GGCATCGAAACGGATCCTCA+AGG - Chr3:64584568-64584587 MsG0380015056.01.T01:three_prime_UTR 55.0%
!! AGTGGCGGGGTCTGTTTTGA+GGG - Chr3:64585339-64585358 MsG0380015056.01.T01:intron 55.0%
ACTCAGGCTCTCGGCCACTT+CGG + Chr3:64585871-64585890 None:intergenic 60.0%
AGGTTCGAACCATGGACGCG+AGG - Chr3:64585454-64585473 MsG0380015056.01.T01:intron 60.0%
CACAAGCGGGTCATCGGGAT+TGG + Chr3:64587180-64587199 None:intergenic 60.0%
CTTCTGTGTCCAGCTGCGTG+CGG + Chr3:64587252-64587271 None:intergenic 60.0%
GCGTGCGGTGGCTTCATACT+TGG + Chr3:64587237-64587256 None:intergenic 60.0%
TCAGGCACAAGCGGGTCATC+GGG + Chr3:64587185-64587204 None:intergenic 60.0%
TCTATCTAGCCGCGCAGTGG+CGG - Chr3:64585324-64585343 MsG0380015056.01.T01:intron 60.0%
TCTCGGCCACTTCGGCATTG+AGG + Chr3:64585863-64585882 None:intergenic 60.0%
!! CAGTGGCGGGGTCTGTTTTG+AGG - Chr3:64585338-64585357 MsG0380015056.01.T01:intron 60.0%
!! GTGGCGGGGTCTGTTTTGAG+GGG - Chr3:64585340-64585359 MsG0380015056.01.T01:intron 60.0%
AAACAGACCCCGCCACTGCG+CGG + Chr3:64585336-64585355 None:intergenic 65.0%
ATGAAGCCACCGCACGCAGC+TGG - Chr3:64587240-64587259 MsG0380015056.01.T01:intron 65.0%
CTATCTAGCCGCGCAGTGGC+GGG - Chr3:64585325-64585344 MsG0380015056.01.T01:intron 65.0%
GCAGGCAGTCGATCCCGACA+GGG - Chr3:64585373-64585392 MsG0380015056.01.T01:intron 65.0%
TATCTAGCCGCGCAGTGGCG+GGG - Chr3:64585326-64585345 MsG0380015056.01.T01:intron 65.0%
CTGTGTCCAGCTGCGTGCGG+TGG + Chr3:64587249-64587268 None:intergenic 70.0%
GGCAGGCAGTCGATCCCGAC+AGG - Chr3:64585372-64585391 MsG0380015056.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 64584365 64587574 64584365 ID=MsG0380015056.01;Name=MsG0380015056.01
Chr3 mRNA 64584365 64587574 64584365 ID=MsG0380015056.01.T01;Parent=MsG0380015056.01;Name=MsG0380015056.01.T01;_AED=0.46;_eAED=0.46;_QI=201|1|1|1|0.66|0.75|4|288|148
Chr3 exon 64584365 64584796 64584365 ID=MsG0380015056.01.T01:exon:30079;Parent=MsG0380015056.01.T01
Chr3 exon 64585457 64585561 64585457 ID=MsG0380015056.01.T01:exon:30078;Parent=MsG0380015056.01.T01
Chr3 exon 64586822 64586949 64586822 ID=MsG0380015056.01.T01:exon:30077;Parent=MsG0380015056.01.T01
Chr3 exon 64587304 64587574 64587304 ID=MsG0380015056.01.T01:exon:30076;Parent=MsG0380015056.01.T01
Chr3 five_prime_UTR 64587374 64587574 64587374 ID=MsG0380015056.01.T01:five_prime_utr;Parent=MsG0380015056.01.T01
Chr3 CDS 64587304 64587373 64587304 ID=MsG0380015056.01.T01:cds;Parent=MsG0380015056.01.T01
Chr3 CDS 64586822 64586949 64586822 ID=MsG0380015056.01.T01:cds;Parent=MsG0380015056.01.T01
Chr3 CDS 64585457 64585561 64585457 ID=MsG0380015056.01.T01:cds;Parent=MsG0380015056.01.T01
Chr3 CDS 64584653 64584796 64584653 ID=MsG0380015056.01.T01:cds;Parent=MsG0380015056.01.T01
Chr3 three_prime_UTR 64584365 64584652 64584365 ID=MsG0380015056.01.T01:three_prime_utr;Parent=MsG0380015056.01.T01
Gene Sequence

>MsG0380015056.01.T01

ATGGCATCGAAACGGATCCTCAAGGAGCTCAAGGATTTGCAGAAGGATCCACCAACATCATGCAGTGCAGGTCCTGTGGCTGAGGACATGTTTCATTGGCAAGCAACAATCATGGGACCTGCTGATAGCCCTTATGCTGGTGGTGTGTTTTTGGTTTCAATTCATTTTCCTCCGGATTATCCATTCAAGCCACCAAAGGTTGCATTTAGGACTAAGGTATTCCACCCAAACATCAACAGCAATGGAAGTATTTGTCTCGACATTCTTAAGGAACAATGGAGCCCTGCACTGACCATTTCCAAGGTGCTTTTGTCAATCTGCTCATTGTTGACGGATCCCAATCCCGATGACCCGCTTGTGCCTGAAATTGCACATATGTACAAGACTGACAGGACCAAGTATGAAGCCACCGCACGCAGCTGGACACAGAAGTATGCCATGGGATGA
Protein sequence

>MsG0380015056.01.T01

MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRTKYEATARSWTQKYAMG*