AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039353.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039353.01.T01 MTR_3g099570 59.119 159 51 5 105 260 37 184 6.22e-38 132
MsG0780039353.01.T01 MTR_3g099570 66.667 63 16 1 1 63 1 58 7.89e-18 79.3
MsG0780039353.01.T01 MTR_3g099580 57.714 175 56 5 90 260 26 186 2.79e-34 122
MsG0780039353.01.T01 MTR_3g099580 65.079 63 17 1 1 63 1 58 1.48e-17 78.6
MsG0780039353.01.T01 MTR_3g099680 76.812 69 14 2 125 191 55 123 1.51e-26 103
MsG0780039353.01.T01 MTR_3g099980 48.851 174 40 5 125 260 55 217 4.40e-26 102
MsG0780039353.01.T01 MTR_3g099980 61.905 63 19 1 1 63 1 58 6.74e-15 72.0
MsG0780039353.01.T01 MTR_0285s0020 65.152 66 23 0 58 123 100 165 5.33e-22 90.1
MsG0780039353.01.T01 MTR_2g041060 58.462 65 25 1 58 122 52 114 5.16e-20 85.9
MsG0780039353.01.T01 MTR_3g099540 34.826 201 60 5 1 200 1 131 4.91e-19 80.9
MsG0780039353.01.T01 MTR_7g034685 39.583 96 55 2 60 153 17 111 1.91e-18 79.0
MsG0780039353.01.T01 MTR_3g041640 40.566 106 49 3 28 122 22 124 7.73e-18 78.2
MsG0780039353.01.T01 MTR_8g007020 44.545 110 41 4 126 223 54 155 2.99e-16 75.1
MsG0780039353.01.T01 MTR_8g007035 52.113 71 32 1 125 193 53 123 1.90e-15 73.2
MsG0780039353.01.T01 MTR_2g088990 38.462 104 61 2 108 210 40 141 3.69e-13 67.4
MsG0780039353.01.T01 MTR_0334s0010 37.209 86 52 1 107 192 44 127 2.57e-12 64.7
MsG0780039353.01.T01 MTR_1g090190 33.333 102 65 2 125 224 52 152 4.49e-12 63.5
MsG0780039353.01.T01 MTR_3g467460 55.556 54 20 2 58 110 63 113 9.74e-12 60.8
MsG0780039353.01.T01 MTR_8g015630 52.941 51 24 0 73 123 275 325 1.15e-11 64.3
MsG0780039353.01.T01 MTR_3g052720 55.814 43 19 0 81 123 1008 1050 1.35e-11 64.7
MsG0780039353.01.T01 MTR_6g462100 69.444 36 11 0 58 93 184 219 2.31e-11 62.4
MsG0780039353.01.T01 MTR_4g053908 50.943 53 26 0 58 110 6 58 2.83e-11 60.5
MsG0780039353.01.T01 MTR_2g096700 43.548 62 35 0 62 123 3 64 2.93e-11 58.5
MsG0780039353.01.T01 MTR_0029s0040 60.465 43 17 0 81 123 41 83 2.95e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039353.01.T01 AT1G72230 55.882 102 38 2 119 213 46 147 2.84e-25 99.0
MsG0780039353.01.T01 AT1G22480 57.746 71 30 0 126 196 49 119 2.85e-18 80.1
MsG0780039353.01.T01 AT2G44790 49.296 71 34 1 127 195 59 129 5.73e-12 63.5
MsG0780039353.01.T01 AT5G07475 32.653 98 56 1 126 213 60 157 1.40e-11 62.4
MsG0780039353.01.T01 AT2G32300 33.036 112 70 2 105 212 37 147 2.71e-11 62.8
MsG0780039353.01.T01 AT2G32300 34.513 113 67 3 105 212 67 177 6.50e-11 61.6

Find 56 sgRNAs with CRISPR-Local

Find 110 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACTGTTGGATATACTTT+AGG 0.242964 7:+62563003 MsG0780039353.01.T01:CDS
AAACTGGGACGCGGATTGTC+TGG 0.321236 7:+62563417 MsG0780039353.01.T01:CDS
TATCTTGAGCAGTTATATAT+TGG 0.326477 7:+62564366 MsG0780039353.01.T01:CDS
GAAACTTTCTGTTAAGGTTA+AGG 0.337776 7:+62564162 MsG0780039353.01.T01:CDS
CTATCATCATTGAAGTGATA+TGG 0.341682 7:+62563305 MsG0780039353.01.T01:CDS
TTTGCTCAGAACTTGTGTTT+TGG 0.348364 7:+62563445 MsG0780039353.01.T01:CDS
AATGGCATTCTCTAATGCTT+TGG 0.376284 7:+62562927 None:intergenic
TATACTTTAGGTTGGACAAT+TGG 0.393984 7:+62563015 MsG0780039353.01.T01:CDS
ATTCCACCACAAGCCGCAAT+TGG 0.413485 7:-62563388 None:intergenic
CATATCACTTCAATGATGAT+AGG 0.420992 7:-62563304 None:intergenic
AGTAGTAATGGTGGTGGTGG+TGG 0.421222 7:-62564278 None:intergenic
CTAAAGTATATCCAACAGTT+TGG 0.426832 7:-62563002 None:intergenic
TGGCATGAAACTTTCTGTTA+AGG 0.430118 7:+62564156 MsG0780039353.01.T01:CDS
TTCAATGATGATAGGTGCCT+TGG 0.437188 7:-62563296 None:intergenic
GTGTCAAGGGTGCCATTAGA+AGG 0.440459 7:-62564238 None:intergenic
TTTGCAGTTGGTGGCAGTCT+TGG 0.447550 7:+62563072 MsG0780039353.01.T01:CDS
ACACAAAATAAAGCAACAAT+TGG 0.453412 7:-62564340 None:intergenic
CCTTCAGCAACACCATCATC+AGG 0.465583 7:+62564205 MsG0780039353.01.T01:CDS
AACTGGGACGCGGATTGTCT+GGG 0.477784 7:+62563418 MsG0780039353.01.T01:CDS
GGGAAAGATTCACCTTCTAA+TGG 0.495606 7:+62564226 MsG0780039353.01.T01:CDS
GACAAAACGTTTGCAGTTGG+TGG 0.508177 7:+62563063 MsG0780039353.01.T01:CDS
CCTCCAATTGCGGCTTGTGG+TGG 0.512732 7:+62563385 MsG0780039353.01.T01:CDS
CCTGATGATGGTGTTGCTGA+AGG 0.515605 7:-62564205 None:intergenic
CCACCACAAGCCGCAATTGG+AGG 0.519511 7:-62563385 None:intergenic
CTGTTGGATATACTTTAGGT+TGG 0.519781 7:+62563007 MsG0780039353.01.T01:CDS
GTGTAGTAGTAGTTGTGTCA+AGG 0.523552 7:-62564252 None:intergenic
TCAATGATGATAGGTGCCTT+GGG 0.524713 7:-62563295 None:intergenic
CTTGCAACTGTCCAAACTGT+TGG 0.530999 7:+62562991 MsG0780039353.01.T01:CDS
GTTCCTAGACATTGCATAGG+TGG 0.532016 7:+62564136 MsG0780039353.01.T01:CDS
TTGCATAGTAGGAGTAGTAA+TGG 0.537674 7:-62564290 None:intergenic
ATTTAATCCAGTTCAGAAGT+GGG 0.545843 7:-62563333 None:intergenic
CATTTAATCCAGTTCAGAAG+TGG 0.548468 7:-62563334 None:intergenic
AGGAGTAGTAATGGTGGTGG+TGG 0.553889 7:-62564281 None:intergenic
ATGCCACCTATGCAATGTCT+AGG 0.559125 7:-62564139 None:intergenic
CATAGTAGGAGTAGTAATGG+TGG 0.571283 7:-62564287 None:intergenic
AGTGACAAAACGTTTGCAGT+TGG 0.580140 7:+62563060 MsG0780039353.01.T01:CDS
GTTGTTCCTAGACATTGCAT+AGG 0.582787 7:+62564133 MsG0780039353.01.T01:CDS
TTTAATCCAGTTCAGAAGTG+GGG 0.586149 7:-62563332 None:intergenic
TGTAGTAGTAGTTGTGTCAA+GGG 0.587781 7:-62564251 None:intergenic
TGCTGAAGGAGTAGCAGAAG+CGG 0.590270 7:-62564191 None:intergenic
AACACAGACGGTGATGCGGC+TGG 0.593596 7:+62563358 MsG0780039353.01.T01:CDS
TTGGTTCTGATTATAGCACA+TGG 0.594020 7:+62563034 MsG0780039353.01.T01:CDS
GGTGAATCTTTCCCTGATGA+TGG 0.604368 7:-62564217 None:intergenic
TTAATCCAGTTCAGAAGTGG+GGG 0.605594 7:-62563331 None:intergenic
GGCTGGTACTCCTCCAATTG+CGG 0.609195 7:+62563375 MsG0780039353.01.T01:CDS
AGTAGGAGTAGTAATGGTGG+TGG 0.622694 7:-62564284 None:intergenic
TCAATAAGTACATACAGTAG+TGG 0.623348 7:+62564061 MsG0780039353.01.T01:CDS
ACTCCTCCAATTGCGGCTTG+TGG 0.627265 7:+62563382 MsG0780039353.01.T01:CDS
CTTCAGCAACACCATCATCA+GGG 0.639249 7:+62564206 MsG0780039353.01.T01:CDS
TGGATTAAATGTAACACAGA+CGG 0.640054 7:+62563346 MsG0780039353.01.T01:CDS
ATGATGATAGGTGCCTTGGG+AGG 0.650443 7:-62563292 None:intergenic
ATGTAACACAGACGGTGATG+CGG 0.656751 7:+62563354 MsG0780039353.01.T01:CDS
TGGTTCTGATTATAGCACAT+GGG 0.657088 7:+62563035 MsG0780039353.01.T01:CDS
TGATGATAGGTGCCTTGGGA+GGG 0.658158 7:-62563291 None:intergenic
TTATGGAGTTGGGCACACAG+TGG 0.740919 7:+62563994 MsG0780039353.01.T01:CDS
ACAGTTGCAAGACTTGACAG+TGG 0.752814 7:-62562979 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAACAAAATAAAG+GGG - Chr7:62563848-62563867 None:intergenic 10.0%
!! CAAAAATAAAAACAAAATAA+AGG - Chr7:62563850-62563869 None:intergenic 10.0%
!!! CTTTATTTTGTTTTTATTTT+TGG + Chr7:62563848-62563867 MsG0780039353.01.T01:intron 10.0%
!! AAATAAAAACAAAATAAAGG+GGG - Chr7:62563847-62563866 None:intergenic 15.0%
!!! AAATTAACAAATCTAAAACT+AGG - Chr7:62563803-62563822 None:intergenic 15.0%
!!! TAGATTTGTTAATTTTTGAA+AGG + Chr7:62563808-62563827 MsG0780039353.01.T01:intron 15.0%
!!! TATTTTGTTTTTATTTTTGG+TGG + Chr7:62563851-62563870 MsG0780039353.01.T01:intron 15.0%
!!! TTTTTATTTGCTGAATTATT+AGG + Chr7:62563472-62563491 MsG0780039353.01.T01:intron 15.0%
!! CTGATAGTTTAGTAAATATT+GGG + Chr7:62563696-62563715 MsG0780039353.01.T01:intron 20.0%
!!! TACATTAGTTTTGTAAATTG+TGG - Chr7:62563948-62563967 None:intergenic 20.0%
!!! TGTTAATTTTTGAAAGGTAT+TGG + Chr7:62563814-62563833 MsG0780039353.01.T01:intron 20.0%
!!! TTATTTTTGGTGGAATATAT+AGG + Chr7:62563861-62563880 MsG0780039353.01.T01:intron 20.0%
! ACACAAAATAAAGCAACAAT+TGG - Chr7:62564343-62564362 None:intergenic 25.0%
! GCTGATAGTTTAGTAAATAT+TGG + Chr7:62563695-62563714 MsG0780039353.01.T01:intron 25.0%
! TAGTCTCATATATTTAGAGA+AGG + Chr7:62563662-62563681 MsG0780039353.01.T01:intron 25.0%
! TATCTTGAGCAGTTATATAT+TGG + Chr7:62564366-62564385 MsG0780039353.01.T01:CDS 25.0%
! TGTAATATCTAATGTCTCAT+TGG + Chr7:62563182-62563201 MsG0780039353.01.T01:intron 25.0%
!! ACTATGACAGTTTTCAATTA+TGG + Chr7:62563977-62563996 MsG0780039353.01.T01:intron 25.0%
!!! AGATTTCTTAGTTTTGTTTC+CGG - Chr7:62563208-62563227 None:intergenic 25.0%
ACAACTCAATAGTTGAATTC+AGG + Chr7:62563239-62563258 MsG0780039353.01.T01:intron 30.0%
ATGGAACAAAAGGAATAGAT+GGG + Chr7:62563603-62563622 MsG0780039353.01.T01:intron 30.0%
ATTGAGATAGCTTACAACAA+AGG + Chr7:62563508-62563527 MsG0780039353.01.T01:intron 30.0%
ATTTAATCCAGTTCAGAAGT+GGG - Chr7:62563336-62563355 None:intergenic 30.0%
CAAACTGTTGGATATACTTT+AGG + Chr7:62563003-62563022 MsG0780039353.01.T01:CDS 30.0%
CATATCACTTCAATGATGAT+AGG - Chr7:62563307-62563326 None:intergenic 30.0%
CTAAAGTATATCCAACAGTT+TGG - Chr7:62563005-62563024 None:intergenic 30.0%
CTATCATCATTGAAGTGATA+TGG + Chr7:62563305-62563324 MsG0780039353.01.T01:CDS 30.0%
GAAACTTTCTGTTAAGGTTA+AGG + Chr7:62564162-62564181 MsG0780039353.01.T01:CDS 30.0%
TCAATAAGTACATACAGTAG+TGG + Chr7:62564061-62564080 MsG0780039353.01.T01:CDS 30.0%
TGGATTAAATGTAACACAGA+CGG + Chr7:62563346-62563365 MsG0780039353.01.T01:CDS 30.0%
! ACAGTTTTCAATTATGGAGT+TGG + Chr7:62563983-62564002 MsG0780039353.01.T01:intron 30.0%
! CAGTTTTCAATTATGGAGTT+GGG + Chr7:62563984-62564003 MsG0780039353.01.T01:intron 30.0%
!! TATACTTTAGGTTGGACAAT+TGG + Chr7:62563015-62563034 MsG0780039353.01.T01:CDS 30.0%
!!! AATGAGTTCCAACTTTTTTG+AGG - Chr7:62564102-62564121 None:intergenic 30.0%
!!! ATGAGTTCCAACTTTTTTGA+GGG - Chr7:62564101-62564120 None:intergenic 30.0%
!!! TTCTCTAATGCTTTGGTTTT+AGG + Chr7:62562934-62562953 MsG0780039353.01.T01:CDS 30.0%
AACAAAGGACGAAGACTTAA+AGG - Chr7:62563581-62563600 None:intergenic 35.0%
ATATCTAATGTCTCATTGGC+CGG + Chr7:62563186-62563205 MsG0780039353.01.T01:intron 35.0%
ATCATTCCCCTCAAAAAAGT+TGG + Chr7:62564091-62564110 MsG0780039353.01.T01:CDS 35.0%
CATGGAACAAAAGGAATAGA+TGG + Chr7:62563602-62563621 MsG0780039353.01.T01:intron 35.0%
CATTTAATCCAGTTCAGAAG+TGG - Chr7:62563337-62563356 None:intergenic 35.0%
CTGTTGGATATACTTTAGGT+TGG + Chr7:62563007-62563026 MsG0780039353.01.T01:CDS 35.0%
TGGCATGAAACTTTCTGTTA+AGG + Chr7:62564156-62564175 MsG0780039353.01.T01:CDS 35.0%
TGTAGTAGTAGTTGTGTCAA+GGG - Chr7:62564254-62564273 None:intergenic 35.0%
TTGCATAGTAGGAGTAGTAA+TGG - Chr7:62564293-62564312 None:intergenic 35.0%
TTTAATCCAGTTCAGAAGTG+GGG - Chr7:62563335-62563354 None:intergenic 35.0%
! CATCTATTCCTTTTGTTCCA+TGG - Chr7:62563604-62563623 None:intergenic 35.0%
! GCTAGAAACTGATTCTACAT+TGG + Chr7:62563546-62563565 MsG0780039353.01.T01:intron 35.0%
! TGGTGGAATTTTCAGAAACT+GGG + Chr7:62563402-62563421 MsG0780039353.01.T01:CDS 35.0%
! TGTCTATCAACTCTTTTGTC+TGG + Chr7:62563720-62563739 MsG0780039353.01.T01:intron 35.0%
! TTTGCTCAGAACTTGTGTTT+TGG + Chr7:62563445-62563464 MsG0780039353.01.T01:CDS 35.0%
!! GAAAGTGCATTTTGCATAGT+AGG - Chr7:62564304-62564323 None:intergenic 35.0%
!! TGGTTCTGATTATAGCACAT+GGG + Chr7:62563035-62563054 MsG0780039353.01.T01:CDS 35.0%
!! TTGGTTCTGATTATAGCACA+TGG + Chr7:62563034-62563053 MsG0780039353.01.T01:CDS 35.0%
!!! TGAGTTCCAACTTTTTTGAG+GGG - Chr7:62564100-62564119 None:intergenic 35.0%
!!! TTTTTGAAAGGTATTGGCCT+TGG + Chr7:62563820-62563839 MsG0780039353.01.T01:intron 35.0%
!!! TTTTTTGAGGGGAATGATTG+TGG - Chr7:62564089-62564108 None:intergenic 35.0%
AACAAAATAAAGGGGGACCA+AGG - Chr7:62563840-62563859 None:intergenic 40.0%
ACAAAGGCTGGACTAATTTG+TGG + Chr7:62563524-62563543 MsG0780039353.01.T01:intron 40.0%
AGATAGCTTACAACAAAGGC+TGG + Chr7:62563512-62563531 MsG0780039353.01.T01:intron 40.0%
AGTGACAAAACGTTTGCAGT+TGG + Chr7:62563060-62563079 MsG0780039353.01.T01:CDS 40.0%
ATTCCTAAAGAAGTCAGCTC+TGG - Chr7:62563768-62563787 None:intergenic 40.0%
CATAGTAGGAGTAGTAATGG+TGG - Chr7:62564290-62564309 None:intergenic 40.0%
CCTTTGTTCCATGGAACAAA+AGG + Chr7:62563593-62563612 MsG0780039353.01.T01:intron 40.0%
GGGAAAGATTCACCTTCTAA+TGG + Chr7:62564226-62564245 MsG0780039353.01.T01:CDS 40.0%
GTGTAGTAGTAGTTGTGTCA+AGG - Chr7:62564255-62564274 None:intergenic 40.0%
GTTGTTCCTAGACATTGCAT+AGG + Chr7:62564133-62564152 MsG0780039353.01.T01:CDS 40.0%
TCAATGATGATAGGTGCCTT+GGG - Chr7:62563298-62563317 None:intergenic 40.0%
TTAATCCAGTTCAGAAGTGG+GGG - Chr7:62563334-62563353 None:intergenic 40.0%
TTCAATGATGATAGGTGCCT+TGG - Chr7:62563299-62563318 None:intergenic 40.0%
! AATTTTCAGAAACTGGGACG+CGG + Chr7:62563408-62563427 MsG0780039353.01.T01:CDS 40.0%
! CCTTTTGTTCCATGGAACAA+AGG - Chr7:62563596-62563615 None:intergenic 40.0%
! GACTTCTTTAGGAATAGGCT+TGG + Chr7:62563773-62563792 MsG0780039353.01.T01:intron 40.0%
! GAGCTGACTTCTTTAGGAAT+AGG + Chr7:62563768-62563787 MsG0780039353.01.T01:intron 40.0%
!! GTGGTGGAATTTTCAGAAAC+TGG + Chr7:62563401-62563420 MsG0780039353.01.T01:CDS 40.0%
!!! CATTTTAATTCACCCTCCCA+AGG + Chr7:62563279-62563298 MsG0780039353.01.T01:CDS 40.0%
ACAGTTGCAAGACTTGACAG+TGG - Chr7:62562982-62563001 None:intergenic 45.0%
AGTAGGAGTAGTAATGGTGG+TGG - Chr7:62564287-62564306 None:intergenic 45.0%
AGTCTTCGTCCTTTGTTCCA+TGG + Chr7:62563584-62563603 MsG0780039353.01.T01:intron 45.0%
ATGCCACCTATGCAATGTCT+AGG - Chr7:62564142-62564161 None:intergenic 45.0%
ATGTAACACAGACGGTGATG+CGG + Chr7:62563354-62563373 MsG0780039353.01.T01:CDS 45.0%
CTTCAGCAACACCATCATCA+GGG + Chr7:62564206-62564225 MsG0780039353.01.T01:CDS 45.0%
CTTGCAACTGTCCAAACTGT+TGG + Chr7:62562991-62563010 MsG0780039353.01.T01:CDS 45.0%
GACAAAACGTTTGCAGTTGG+TGG + Chr7:62563063-62563082 MsG0780039353.01.T01:CDS 45.0%
GGTGAATCTTTCCCTGATGA+TGG - Chr7:62564220-62564239 None:intergenic 45.0%
GTTCCTAGACATTGCATAGG+TGG + Chr7:62564136-62564155 MsG0780039353.01.T01:CDS 45.0%
! AAGCCAGAGCTGACTTCTTT+AGG + Chr7:62563762-62563781 MsG0780039353.01.T01:intron 45.0%
!! AAAAATAAAAACAAAATAAA+GGG - Chr7:62563849-62563868 None:intergenic 5.0%
ATGATGATAGGTGCCTTGGG+AGG - Chr7:62563295-62563314 None:intergenic 50.0%
ATTCCACCACAAGCCGCAAT+TGG - Chr7:62563391-62563410 None:intergenic 50.0%
CCTTCAGCAACACCATCATC+AGG + Chr7:62564205-62564224 MsG0780039353.01.T01:CDS 50.0%
TGATGATAGGTGCCTTGGGA+GGG - Chr7:62563294-62563313 None:intergenic 50.0%
TGCTGAAGGAGTAGCAGAAG+CGG - Chr7:62564194-62564213 None:intergenic 50.0%
TTATGGAGTTGGGCACACAG+TGG + Chr7:62563994-62564013 MsG0780039353.01.T01:CDS 50.0%
! AAGTCAGCTCTGGCTTGAGA+TGG - Chr7:62563758-62563777 None:intergenic 50.0%
!! AGGAGTAGTAATGGTGGTGG+TGG - Chr7:62564284-62564303 None:intergenic 50.0%
!! AGTAGTAATGGTGGTGGTGG+TGG - Chr7:62564281-62564300 None:intergenic 50.0%
!! CCTGATGATGGTGTTGCTGA+AGG - Chr7:62564208-62564227 None:intergenic 50.0%
!! GTGTCAAGGGTGCCATTAGA+AGG - Chr7:62564241-62564260 None:intergenic 50.0%
!! TTTGCAGTTGGTGGCAGTCT+TGG + Chr7:62563072-62563091 MsG0780039353.01.T01:CDS 50.0%
ACTCCTCCAATTGCGGCTTG+TGG + Chr7:62563382-62563401 MsG0780039353.01.T01:CDS 55.0%
GGCTGGTACTCCTCCAATTG+CGG + Chr7:62563375-62563394 MsG0780039353.01.T01:CDS 55.0%
! AAACTGGGACGCGGATTGTC+TGG + Chr7:62563417-62563436 MsG0780039353.01.T01:CDS 55.0%
! AACTGGGACGCGGATTGTCT+GGG + Chr7:62563418-62563437 MsG0780039353.01.T01:CDS 55.0%
!! AGTAATGGTGGTGGTGGTGG+AGG - Chr7:62564278-62564297 None:intergenic 55.0%
!! GTAATGGTGGTGGTGGTGGA+GGG - Chr7:62564277-62564296 None:intergenic 55.0%
AACACAGACGGTGATGCGGC+TGG + Chr7:62563358-62563377 MsG0780039353.01.T01:CDS 60.0%
CCACCACAAGCCGCAATTGG+AGG - Chr7:62563388-62563407 None:intergenic 60.0%
CCTCCAATTGCGGCTTGTGG+TGG + Chr7:62563385-62563404 MsG0780039353.01.T01:CDS 60.0%
GGCAACCCCCACTTCTGAAC+TGG + Chr7:62563326-62563345 MsG0780039353.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 62562928 62564393 62562928 ID=MsG0780039353.01;Name=MsG0780039353.01
Chr7 mRNA 62562928 62564393 62562928 ID=MsG0780039353.01.T01;Parent=MsG0780039353.01;Name=MsG0780039353.01.T01;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|0|0.33|3|0|260
Chr7 exon 62562928 62563097 62562928 ID=MsG0780039353.01.T01:exon:16989;Parent=MsG0780039353.01.T01
Chr7 exon 62563261 62563466 62563261 ID=MsG0780039353.01.T01:exon:16988;Parent=MsG0780039353.01.T01
Chr7 exon 62563987 62564393 62563987 ID=MsG0780039353.01.T01:exon:16987;Parent=MsG0780039353.01.T01
Chr7 CDS 62562928 62563097 62562928 ID=MsG0780039353.01.T01:cds;Parent=MsG0780039353.01.T01
Chr7 CDS 62563261 62563466 62563261 ID=MsG0780039353.01.T01:cds;Parent=MsG0780039353.01.T01
Chr7 CDS 62563987 62564393 62563987 ID=MsG0780039353.01.T01:cds;Parent=MsG0780039353.01.T01
Gene Sequence

>MsG0780039353.01.T01

ATGGCATTCTCTAATGCTTTGGTTTTAGGCTTCTACTTAACGATCAATATGCCACTGTCAAGTCTTGCAACTGTCCAAACTGTTGGATATACTTTAGGTTGGACAATTGGTTCTGATTATAGCACATGGGCTAGTGACAAAACGTTTGCAGTTGGTGGCAGTCTTGGCAAGATTCTAAAAGTTTTCAACATTTTAATTCACCCTCCCAAGGCACCTATCATCATTGAAGTGATATGGCAACCCCCACTTCTGAACTGGATTAAATGTAACACAGACGGTGATGCGGCTGGTACTCCTCCAATTGCGGCTTGTGGTGGAATTTTCAGAAACTGGGACGCGGATTGTCTGGGATGCTTTGCTCAGAACTTGTGTTTTGTTTTCAATTATGGAGTTGGGCACACAGTGGATGAAGTTAAAGAAAGTGATTATAAATCATGCATAACTAGAAATTCAATAAGTACATACAGTAGTGGTGCCACAATCATTCCCCTCAAAAAAGTTGGAACTCATTACTTCATATTTGTTGTTCCTAGACATTGCATAGGTGGCATGAAACTTTCTGTTAAGGTTAAGGCTTCTTCCGCTTCTGCTACTCCTTCAGCAACACCATCATCAGGGAAAGATTCACCTTCTAATGGCACCCTTGACACAACTACTACTACACCCTCCACCACCACCACCATTACTACTCCTACTATGCAAAATGCACTTTCAGCTACTAGTCTCTCACCAATTGTTGCTTTATTTTGTGTTGTTATCTTGAGCAGTTATATATTGGTTTGA
Protein sequence

>MsG0780039353.01.T01

MAFSNALVLGFYLTINMPLSSLATVQTVGYTLGWTIGSDYSTWASDKTFAVGGSLGKILKVFNILIHPPKAPIIIEVIWQPPLLNWIKCNTDGDAAGTPPIAACGGIFRNWDADCLGCFAQNLCFVFNYGVGHTVDEVKESDYKSCITRNSISTYSSGATIIPLKKVGTHYFIFVVPRHCIGGMKLSVKVKASSASATPSATPSSGKDSPSNGTLDTTTTTPSTTTTITTPTMQNALSATSLSPIVALFCVVILSSYILV*