AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039671.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039671.01.T01 MTR_7g012350 97.297 185 5 0 1 185 1 185 5.10e-132 379
MsG0780039671.01.T01 MTR_7g012350 72.727 132 35 1 223 354 55 185 3.87e-61 197
MsG0780039671.01.T01 MTR_7g076920 96.757 185 6 0 1 185 1 185 1.38e-131 378
MsG0780039671.01.T01 MTR_7g076920 72.727 132 35 1 223 354 55 185 7.04e-61 197
MsG0780039671.01.T01 MTR_7g076990 96.757 185 6 0 1 185 1 185 3.22e-131 377
MsG0780039671.01.T01 MTR_7g076990 71.970 132 36 1 223 354 55 185 9.10e-61 197
MsG0780039671.01.T01 MTR_4g036300 96.757 185 6 0 1 185 1 185 3.22e-131 377
MsG0780039671.01.T01 MTR_4g036300 71.970 132 36 1 223 354 55 185 9.10e-61 197
MsG0780039671.01.T01 MTR_7g012340 87.027 185 24 0 1 185 1 185 7.19e-119 345
MsG0780039671.01.T01 MTR_7g012340 87.000 100 13 0 255 354 86 185 2.11e-58 191
MsG0780039671.01.T01 MTR_7g076970 87.097 186 23 1 1 185 1 186 3.58e-116 338
MsG0780039671.01.T01 MTR_7g076970 98.000 100 2 0 255 354 87 186 1.20e-66 212
MsG0780039671.01.T01 MTR_7g077090 86.022 186 25 1 1 185 1 186 1.53e-115 337
MsG0780039671.01.T01 MTR_7g077090 96.000 100 4 0 255 354 87 186 7.77e-66 210
MsG0780039671.01.T01 MTR_7g076770 86.022 186 25 1 1 185 1 186 3.34e-115 336
MsG0780039671.01.T01 MTR_7g076770 78.226 124 26 1 231 354 64 186 5.48e-64 205
MsG0780039671.01.T01 MTR_7g077110 83.243 185 31 0 1 185 1 185 1.37e-114 335
MsG0780039671.01.T01 MTR_7g077110 68.182 132 41 1 223 354 55 185 1.36e-56 186
MsG0780039671.01.T01 MTR_4g036290 82.162 185 33 0 1 185 1 185 3.35e-112 328
MsG0780039671.01.T01 MTR_4g036290 68.182 132 41 1 223 354 55 185 1.20e-56 186
MsG0780039671.01.T01 MTR_7g077050 83.243 185 29 1 1 185 1 183 5.10e-112 328
MsG0780039671.01.T01 MTR_7g077050 68.182 132 41 1 223 354 53 183 1.16e-56 186
MsG0780039671.01.T01 MTR_7g077010 81.720 186 33 1 1 185 1 186 9.56e-105 310
MsG0780039671.01.T01 MTR_7g077010 76.515 132 30 1 223 354 56 186 1.30e-65 209
MsG0780039671.01.T01 MTR_4g036410 88.050 159 19 0 27 185 9 167 2.80e-101 300
MsG0780039671.01.T01 MTR_4g036410 99.000 100 1 0 255 354 68 167 1.67e-67 213
MsG0780039671.01.T01 MTR_7g076960 71.892 185 49 3 1 185 1 182 1.88e-92 278
MsG0780039671.01.T01 MTR_7g076960 60.000 150 53 2 205 354 40 182 3.75e-54 179
MsG0780039671.01.T01 MTR_8g031170 63.842 177 64 0 9 185 13 189 1.33e-81 251
MsG0780039671.01.T01 MTR_8g031170 58.462 130 53 1 225 354 61 189 3.21e-48 164
MsG0780039671.01.T01 MTR_7g077000 87.402 127 16 0 59 185 1 127 2.00e-78 240
MsG0780039671.01.T01 MTR_7g077000 84.000 100 16 0 255 354 28 127 3.37e-56 182
MsG0780039671.01.T01 MTR_7g077040 66.000 150 25 1 22 171 1 124 3.63e-63 201
MsG0780039671.01.T01 MTR_7g077040 47.107 121 31 3 223 340 34 124 3.32e-22 92.4
MsG0780039671.01.T01 MTR_2g095130 59.690 129 50 2 58 185 90 217 5.16e-43 151
MsG0780039671.01.T01 MTR_2g095130 57.426 101 41 2 255 354 118 217 4.10e-30 117
MsG0780039671.01.T01 MTR_8g031150 64.286 112 30 1 74 185 42 143 3.99e-40 141
MsG0780039671.01.T01 MTR_8g031150 64.000 100 26 1 255 354 54 143 2.17e-34 126
MsG0780039671.01.T01 MTR_8g031120 61.607 112 33 1 74 185 34 135 9.28e-39 137
MsG0780039671.01.T01 MTR_8g031120 60.000 100 30 1 255 354 46 135 2.27e-32 120
MsG0780039671.01.T01 MTR_8g031160 58.929 112 31 2 74 185 24 120 1.83e-35 128
MsG0780039671.01.T01 MTR_8g031160 57.000 100 28 2 255 354 36 120 2.68e-29 111
MsG0780039671.01.T01 MTR_2g095060 51.370 146 67 3 43 187 76 218 1.20e-33 126
MsG0780039671.01.T01 MTR_2g095060 51.579 95 44 2 263 356 125 218 2.15e-23 98.6
MsG0780039671.01.T01 MTR_2g095080 52.985 134 60 3 57 188 90 222 6.27e-31 119
MsG0780039671.01.T01 MTR_2g095080 51.020 98 46 2 261 357 126 222 3.89e-24 100
MsG0780039671.01.T01 MTR_7g076950 84.615 52 8 0 1 52 1 52 6.89e-25 98.6
MsG0780039671.01.T01 MTR_3g088930 63.393 112 35 2 355 460 341 452 1.87e-24 107
MsG0780039671.01.T01 MTR_3g061050 67.241 58 18 1 59 116 1 57 2.08e-19 84.0
MsG0780039671.01.T01 MTR_2g095170 57.143 63 27 0 57 119 86 148 4.60e-17 79.0
MsG0780039671.01.T01 MTR_7g076930 65.909 44 15 0 74 117 2 45 1.06e-14 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 107 sgRNAs with CRISPR-Local

Find 303 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCCTCCGTCTCCACCTTTC+TGG 0.102117 7:+67406448 None:intergenic
TCTTGTTATCATTGTGGATT+TGG 0.204924 7:-67401949 MsG0780039671.01.T01:CDS
TACCGTTTGGACGACACTTT+TGG 0.221951 7:+67406616 None:intergenic
GCATTGCTGTCACTTGTAAA+AGG 0.276093 7:-67404972 MsG0780039671.01.T01:CDS
CTTGTTATCATTGTGGATTT+GGG 0.312381 7:-67401948 MsG0780039671.01.T01:CDS
TGCTGAGTCTTGAACTGATC+TGG 0.325937 7:+67401872 None:intergenic
GTAAAAGGTATTACTTTAGA+TGG 0.326221 7:-67404957 MsG0780039671.01.T01:CDS
GAAAATAGAGTGATGGAATC+TGG 0.335896 7:-67405124 MsG0780039671.01.T01:CDS
AGACCACCCCATTGCTCTTT+AGG 0.343729 7:+67402864 None:intergenic
GAAGCATCAACAATGTTGTT+TGG 0.350738 7:+67402915 None:intergenic
GAAGCATCAACAATGTTGTT+TGG 0.350738 7:+67406225 None:intergenic
CCCGTTGTTGCACTTTCAAC+CGG 0.351339 7:-67403074 MsG0780039671.01.T01:CDS
GTCGTCCAAACGGTAGAATC+AGG 0.371646 7:-67406608 MsG0780039671.01.T01:CDS
TTGTTCATCACATCCCTTTG+TGG 0.385964 7:+67402959 None:intergenic
CAACAAAAGAAAAGAAACTT+TGG 0.388287 7:+67406677 None:intergenic
AACAAAAGAAAAGAAACTTT+GGG 0.390492 7:+67406678 None:intergenic
GTCAGTGTCTACTCATACTA+AGG 0.394172 7:-67406493 MsG0780039671.01.T01:CDS
TTTCCCCTGATTCTACCGTT+TGG 0.407924 7:+67406603 None:intergenic
AAATGTGCCTAAAGAGCAAT+GGG 0.421227 7:-67402871 MsG0780039671.01.T01:CDS
GACTCATTTCTTAGTGAAGA+AGG 0.430679 7:+67402113 None:intergenic
AGGTGTGCCTCAAGATCAAT+GGG 0.438086 7:-67406181 MsG0780039671.01.T01:CDS
TAGGTGTGCCTCAAGATCAA+TGG 0.458722 7:-67406182 MsG0780039671.01.T01:CDS
AGGGGAAAGAAAGCTCCATC+TGG 0.462989 7:-67406588 MsG0780039671.01.T01:CDS
TCTTTGTTGCATTGTCCAGA+TGG 0.466209 7:+67406573 None:intergenic
AATAGAGTTGTTAAGACTGA+TGG 0.466593 7:-67402086 MsG0780039671.01.T01:CDS
CCGGTGGAAAGTGCAACAAC+TGG 0.467144 7:+67406384 None:intergenic
ATATCAAACAACAGGTTAGT+TGG 0.469384 7:-67405178 MsG0780039671.01.T01:intron
GCTCTTGTGGTTGAACCATC+CGG 0.471995 7:+67403055 None:intergenic
CACTAATGGTAATGTTATTG+AGG 0.479752 7:+67403027 None:intergenic
TAAGGCTTTCCACACAGCCT+TGG 0.481698 7:+67406203 None:intergenic
AACATTACCATTAGTGCGAA+TGG 0.486966 7:-67403020 MsG0780039671.01.T01:CDS
CTGATGGAAACTGTGTATCT+TGG 0.489372 7:-67402070 MsG0780039671.01.T01:CDS
CCGGTTGAAAGTGCAACAAC+GGG 0.491101 7:+67403074 None:intergenic
CCAGTTGTTGCACTTTCCAC+CGG 0.491833 7:-67406384 MsG0780039671.01.T01:CDS
ATCACAAATCAGTTGAAAGC+AGG 0.492723 7:-67404915 MsG0780039671.01.T01:CDS
AAGGCTGTGTGGAAAGCCTT+AGG 0.493161 7:-67406201 MsG0780039671.01.T01:CDS
TGCAACAACGGGAGTGTCAT+CGG 0.498769 7:+67403085 None:intergenic
GACTCGTTGCTTAGAGAAGA+AGG 0.501795 7:+67405148 None:intergenic
CTTGCATTTGCAATAAGCTC+AGG 0.504205 7:+67404885 None:intergenic
CAACATTGTTGATGCTTCCA+AGG 0.505059 7:-67402910 MsG0780039671.01.T01:CDS
CAACATTGTTGATGCTTCCA+AGG 0.505059 7:-67406220 MsG0780039671.01.T01:CDS
TGGGAGTGTGCAGCATCAGC+AGG 0.507613 7:-67405104 MsG0780039671.01.T01:CDS
AGATCAGTTCAAGACTCAGC+AGG 0.509683 7:-67401870 MsG0780039671.01.T01:CDS
GCCCAAAAGTGTCGTCCAAA+CGG 0.516263 7:-67406618 MsG0780039671.01.T01:CDS
GACTCTGATTGTTGTGTACA+AGG 0.519672 7:-67406546 MsG0780039671.01.T01:CDS
GCTGAGTCTTGAACTGATCT+GGG 0.520569 7:+67401873 None:intergenic
TAAAGCTTTCCACACAGCCT+TGG 0.523613 7:+67402893 None:intergenic
GCTCTTGTCATTGAACCATC+CGG 0.527778 7:+67406365 None:intergenic
CATTGTTGTTAATTACTCGA+GGG 0.528032 7:-67401919 MsG0780039671.01.T01:CDS
TTGTTGCACTTTCAACCGGA+TGG 0.535631 7:-67403070 MsG0780039671.01.T01:CDS
TATTGAGGCACCTGCTCTTG+TGG 0.537567 7:+67403042 None:intergenic
TTGTTGCACTTTCCACCGGA+TGG 0.538296 7:-67406380 MsG0780039671.01.T01:CDS
TAAATGTGCCTAAAGAGCAA+TGG 0.541938 7:-67402872 MsG0780039671.01.T01:CDS
GCATTGTTGTTAATTACTCG+AGG 0.542950 7:-67401920 MsG0780039671.01.T01:CDS
AAAATAGAGTGATGGAATCT+GGG 0.545253 7:-67405123 MsG0780039671.01.T01:CDS
CACAGAGACTCGTGGGAAGA+CGG 0.546826 7:-67402015 MsG0780039671.01.T01:CDS
GGGGTGGTCTTGACATTACA+TGG 0.556263 7:-67402851 MsG0780039671.01.T01:intron
TGTTGTTTGGACAAGGAGGT+TGG 0.556808 7:+67402928 None:intergenic
TGTTGTTTGGACAAGGAGGT+TGG 0.556808 7:+67406238 None:intergenic
ACACTTAACAGTTTCCAGAA+AGG 0.559234 7:-67406462 MsG0780039671.01.T01:CDS
AAGATTACCATAAGTGCCAA+TGG 0.560301 7:-67406330 MsG0780039671.01.T01:CDS
TCGTCCAAACGGTAGAATCA+GGG 0.560585 7:-67406607 MsG0780039671.01.T01:CDS
TGGAATTCTTGTTATCATTG+TGG 0.563006 7:-67401955 MsG0780039671.01.T01:CDS
ATATCAAACAATAGGTTAGT+CGG 0.567418 7:-67402143 MsG0780039671.01.T01:intron
TCCGGTTGAAAGTGCAACAA+CGG 0.569355 7:+67403073 None:intergenic
GATGGTTCAACCACAAGAGC+AGG 0.569777 7:-67403052 MsG0780039671.01.T01:CDS
TTGATCTTGAGGCACACCTA+AGG 0.572468 7:+67406185 None:intergenic
TCAACAATGTTGTTTGGACA+AGG 0.577465 7:+67402921 None:intergenic
TCAACAATGTTGTTTGGACA+AGG 0.577465 7:+67406231 None:intergenic
ATTTCTTAGTGAAGAAGGCA+AGG 0.578615 7:+67402118 None:intergenic
TGAAAAGGTGGAGATGGAGG+TGG 0.579088 7:-67403137 MsG0780039671.01.T01:intron
CTTAACAGTTTCCAGAAAGG+TGG 0.580928 7:-67406459 MsG0780039671.01.T01:CDS
CAGAAAGGTGGAGACGGAGG+CGG 0.583778 7:-67406447 MsG0780039671.01.T01:CDS
CGAGTCCGAAAATAGAGTGA+TGG 0.589598 7:-67405131 MsG0780039671.01.T01:CDS
AGGCCACCCCATTGATCTTG+AGG 0.591160 7:+67406174 None:intergenic
GCAAATGCAATTCATTCATG+AGG 0.593689 7:-67401822 None:intergenic
GATGAGTGCGACTCTACAAT+GGG 0.597680 7:-67406282 MsG0780039671.01.T01:CDS
CATATTGCACAGAGACTCGT+GGG 0.607913 7:-67402022 MsG0780039671.01.T01:CDS
TCTGGAAACTGTTAAGTGTG+AGG 0.613559 7:+67406466 None:intergenic
TCATATTGCACAGAGACTCG+TGG 0.621958 7:-67402023 MsG0780039671.01.T01:CDS
TGATGAGTGCGACTCTACAA+TGG 0.623194 7:-67406283 MsG0780039671.01.T01:CDS
TACTGCTTGTCACATTCTGA+AGG 0.623840 7:+67403113 None:intergenic
GATGAGTGTGACTCCACAAA+GGG 0.624564 7:-67402972 MsG0780039671.01.T01:CDS
AGTTTCCAGAAAGGTGGAGA+CGG 0.628132 7:-67406453 MsG0780039671.01.T01:CDS
GGGGTGGCCTTGACATAACA+TGG 0.630394 7:-67406161 MsG0780039671.01.T01:intron
CGTCCAAACGGTAGAATCAG+GGG 0.635182 7:-67406606 MsG0780039671.01.T01:CDS
CATCTGACCATGTTATGTCA+AGG 0.637837 7:+67406154 None:intergenic
TTCCAGAAAGGTGGAGACGG+AGG 0.644472 7:-67406450 MsG0780039671.01.T01:CDS
TATTGATTATCACACGCTGA+AGG 0.647901 7:+67406423 None:intergenic
CTTGTCATTGAACCATCCGG+TGG 0.650895 7:+67406368 None:intergenic
TTGTTGTTAATTACTCGAGG+GGG 0.654827 7:-67401917 MsG0780039671.01.T01:CDS
ATTGTTGTTAATTACTCGAG+GGG 0.659915 7:-67401918 MsG0780039671.01.T01:CDS
GTGCCTCAAGATCAATGGGG+TGG 0.662800 7:-67406177 MsG0780039671.01.T01:CDS
GTTGCTTAGAGAAGAAGGCA+AGG 0.662946 7:+67405153 None:intergenic
ACAATGTTGTTTGGACAAGG+AGG 0.667279 7:+67402924 None:intergenic
ACAATGTTGTTTGGACAAGG+AGG 0.667279 7:+67406234 None:intergenic
GATCAGTTCAAGACTCAGCA+GGG 0.670914 7:-67401869 MsG0780039671.01.T01:CDS
ACAAAAGAAAAGAAACTTTG+GGG 0.674398 7:+67406679 None:intergenic
GTGCCTAAAGAGCAATGGGG+TGG 0.674878 7:-67402867 MsG0780039671.01.T01:CDS
TTGATGCTTCCAAGGCTGTG+TGG 0.692840 7:-67402902 MsG0780039671.01.T01:CDS
TTGATGCTTCCAAGGCTGTG+TGG 0.692840 7:-67406212 MsG0780039671.01.T01:CDS
TTAGTATGAGTAGACACTGA+CGG 0.701246 7:+67406495 None:intergenic
TGATGAGTGTGACTCCACAA+AGG 0.703489 7:-67402973 MsG0780039671.01.T01:CDS
GTCACACTCATCAACCACCA+TGG 0.705411 7:+67402983 None:intergenic
GTCGCACTCATCAACCACCG+TGG 0.785169 7:+67406293 None:intergenic
GGTGTGCCTCAAGATCAATG+GGG 0.842472 7:-67406180 MsG0780039671.01.T01:CDS
AATGTGCCTAAAGAGCAATG+GGG 0.842697 7:-67402870 MsG0780039671.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAATTAGTATTTATAG+GGG + Chr7:67406164-67406183 None:intergenic 10.0%
!! CAAATAAATTAGTATTTATA+GGG + Chr7:67406165-67406184 None:intergenic 10.0%
!! CTTATTTATTATGTATTAAT+AGG + Chr7:67404879-67404898 None:intergenic 10.0%
!! TCAAATAAATTAGTATTTAT+AGG + Chr7:67406166-67406185 None:intergenic 10.0%
!!! TTTATTTTTTATTCGATTAA+AGG - Chr7:67404510-67404529 MsG0780039671.01.T01:intron 10.0%
!! AAGTACAAAATATCATTAAA+GGG + Chr7:67405903-67405922 None:intergenic 15.0%
!! AATAAATTAGTATTTATAGG+GGG + Chr7:67406163-67406182 None:intergenic 15.0%
!! AATACATAATAAATAAGTTC+TGG - Chr7:67404882-67404901 MsG0780039671.01.T01:intron 15.0%
!! ATAAAACAATTCTATATTGA+GGG - Chr7:67403793-67403812 MsG0780039671.01.T01:intron 15.0%
!! TAAGTACAAAATATCATTAA+AGG + Chr7:67405904-67405923 None:intergenic 15.0%
!! TATAAAACAATTCTATATTG+AGG - Chr7:67403792-67403811 MsG0780039671.01.T01:intron 15.0%
!! TTTCTTAATTTATAACAGAA+TGG + Chr7:67405804-67405823 None:intergenic 15.0%
!!! AAAATTCAATACATTTTTCA+TGG - Chr7:67402523-67402542 MsG0780039671.01.T01:intron 15.0%
!!! AACAAAATAAAAGAAGTTTT+GGG + Chr7:67405150-67405169 None:intergenic 15.0%
!! AAATTCAAGTAACTAATCTT+TGG + Chr7:67403249-67403268 None:intergenic 20.0%
!! AACAAAAGAAAAGAAACTTT+GGG + Chr7:67401842-67401861 None:intergenic 20.0%
!! AGCAAAAGAAAAACATATTT+AGG + Chr7:67404981-67405000 None:intergenic 20.0%
!! AGTTTCTAATCAAATTTGAT+GGG - Chr7:67406234-67406253 MsG0780039671.01.T01:CDS 20.0%
!! CATAAAGATATTCAGTTTAA+TGG + Chr7:67404830-67404849 None:intergenic 20.0%
!! GTTACTATTTACTAATTTCA+TGG - Chr7:67403880-67403899 MsG0780039671.01.T01:intron 20.0%
!! TTCAAAATACAATATTGCTA+TGG + Chr7:67402619-67402638 None:intergenic 20.0%
!!! AACCATTACAATATCTATTT+TGG + Chr7:67404915-67404934 None:intergenic 20.0%
!!! AAGATTAGTTACTTGAATTT+AGG - Chr7:67403249-67403268 MsG0780039671.01.T01:intron 20.0%
!!! AAGCTAAAATTTTAATTCCA+AGG - Chr7:67402977-67402996 MsG0780039671.01.T01:CDS 20.0%
!!! AAGCTAAACAAAATTTTAAG+TGG - Chr7:67406066-67406085 MsG0780039671.01.T01:intron 20.0%
!!! AATTTGGAGTATTGATATAA+AGG + Chr7:67405878-67405897 None:intergenic 20.0%
!!! AATTTTTTATGCATTACTGA+TGG - Chr7:67406034-67406053 MsG0780039671.01.T01:intron 20.0%
!!! ACAAAATAAAAGAAGTTTTG+GGG + Chr7:67405149-67405168 None:intergenic 20.0%
!!! AGCTAAAATTTTAATTCCAA+GGG - Chr7:67402978-67402997 MsG0780039671.01.T01:CDS 20.0%
!!! CAAAACTTCTTTTATTTTGT+TGG - Chr7:67405149-67405168 MsG0780039671.01.T01:CDS 20.0%
!!! CAACAAAATAAAAGAAGTTT+TGG + Chr7:67405151-67405170 None:intergenic 20.0%
!!! TAAAGGCAAATATTCTATTT+TGG + Chr7:67405861-67405880 None:intergenic 20.0%
!!! TGCAAAGTACAATTTTTATT+TGG - Chr7:67402913-67402932 MsG0780039671.01.T01:CDS 20.0%
!!! TTCAAGTTATAAACTTAGTT+GGG + Chr7:67404667-67404686 None:intergenic 20.0%
! AACATTTACATAATACACAC+TGG + Chr7:67402468-67402487 None:intergenic 25.0%
! AATTACAAAACTAACAGAAG+AGG - Chr7:67405020-67405039 MsG0780039671.01.T01:intron 25.0%
! ACAAAAGAAAAGAAACTTTG+GGG + Chr7:67401841-67401860 None:intergenic 25.0%
! AGACATCAGAATATAACATT+TGG - Chr7:67404701-67404720 MsG0780039671.01.T01:intron 25.0%
! AGACTATATGATATACATTC+AGG - Chr7:67404044-67404063 MsG0780039671.01.T01:intron 25.0%
! ATATCAAACAATAGGTTAGT+CGG - Chr7:67406374-67406393 MsG0780039671.01.T01:CDS 25.0%
! ATATCATTAAAGGGAGAATT+TGG + Chr7:67405894-67405913 None:intergenic 25.0%
! ATTATTGCAGTCAAATGATA+AGG + Chr7:67402571-67402590 None:intergenic 25.0%
! CAAAGGAAAAAAAGTTCAAA+AGG + Chr7:67403226-67403245 None:intergenic 25.0%
! CAACAAAAGAAAAGAAACTT+TGG + Chr7:67401843-67401862 None:intergenic 25.0%
! CTAAATTGTACTAAATGAAG+TGG + Chr7:67402787-67402806 None:intergenic 25.0%
! GAGTTTCTAATCAAATTTGA+TGG - Chr7:67406233-67406252 MsG0780039671.01.T01:CDS 25.0%
! GATATTGTAATGGTTAAACA+AGG - Chr7:67404920-67404939 MsG0780039671.01.T01:CDS 25.0%
! GTCCAAAATAGATATTGTAA+TGG - Chr7:67404910-67404929 MsG0780039671.01.T01:CDS 25.0%
! TATCAACAAAACTAAGATTG+TGG + Chr7:67403320-67403339 None:intergenic 25.0%
! TATCACCAAAACTAAGATTA+TGG + Chr7:67406355-67406374 None:intergenic 25.0%
! TATTTCCAAAATACCTAAGA+AGG + Chr7:67403134-67403153 None:intergenic 25.0%
! TTGTTGATATATCAAACAAC+AGG - Chr7:67403331-67403350 MsG0780039671.01.T01:intron 25.0%
! TTTCGTATGTAGTAGTATTA+AGG - Chr7:67406277-67406296 MsG0780039671.01.T01:CDS 25.0%
!! ACATCATATACAAGTTTTCT+TGG - Chr7:67403748-67403767 MsG0780039671.01.T01:intron 25.0%
!! AGGCATTTTTGATACATTAA+AGG - Chr7:67403825-67403844 MsG0780039671.01.T01:intron 25.0%
!! CTTAATCATTTTCCCTTAAA+CGG + Chr7:67403054-67403073 None:intergenic 25.0%
!! CTTCAAGTTATAAACTTAGT+TGG + Chr7:67404668-67404687 None:intergenic 25.0%
!! TCAGTTTAATGGTATTTTGT+AGG + Chr7:67404819-67404838 None:intergenic 25.0%
!! TTCTTAGTGTTTGATGTTTT+GGG + Chr7:67405076-67405095 None:intergenic 25.0%
!! TTGGTGATATATCAAACAAT+AGG - Chr7:67406366-67406385 MsG0780039671.01.T01:CDS 25.0%
!!! CAAAATAAAAGAAGTTTTGG+GGG + Chr7:67405148-67405167 None:intergenic 25.0%
!!! CACTCTTAATAGTTTTGAAA+AGG - Chr7:67405365-67405384 MsG0780039671.01.T01:intron 25.0%
!!! CTAAACAAAATTTTAAGTGG+AGG - Chr7:67406069-67406088 MsG0780039671.01.T01:intron 25.0%
!!! CTTGTTATCATTGTAGTTTT+GGG - Chr7:67403517-67403536 MsG0780039671.01.T01:intron 25.0%
!!! GCTAAAATTTTAATTCCAAG+GGG - Chr7:67402979-67402998 MsG0780039671.01.T01:CDS 25.0%
!!! GTAAAAGGTATTACTTTAGA+TGG - Chr7:67403560-67403579 MsG0780039671.01.T01:intron 25.0%
!!! TAGGTATTTTGGAAATACTA+TGG - Chr7:67403137-67403156 MsG0780039671.01.T01:intron 25.0%
!!! TATGTGTGATATTTTTTACC+TGG - Chr7:67404375-67404394 MsG0780039671.01.T01:intron 25.0%
!!! TCTTAATAGTTTTGAAAAGG+TGG - Chr7:67405368-67405387 MsG0780039671.01.T01:intron 25.0%
!!! TCTTGTTATCATTGTAGTTT+TGG - Chr7:67403516-67403535 MsG0780039671.01.T01:intron 25.0%
!!! TGTTAGTTTTGTAATTTGCT+TGG + Chr7:67405016-67405035 None:intergenic 25.0%
!!! TTTGTTTTGTTTTGACGAAA+GGG + Chr7:67402713-67402732 None:intergenic 25.0%
AAACCATAGAAACACAAACA+AGG + Chr7:67405717-67405736 None:intergenic 30.0%
AAGTAACTAATCTTTGGCAA+AGG + Chr7:67403243-67403262 None:intergenic 30.0%
AATAGAGTTGTTAAGACTGA+TGG - Chr7:67406431-67406450 MsG0780039671.01.T01:CDS 30.0%
AATCACTACTTGATGAAAAC+GGG - Chr7:67404619-67404638 MsG0780039671.01.T01:intron 30.0%
ACAATTTGTCAAGAAAAGGA+AGG - Chr7:67404480-67404499 MsG0780039671.01.T01:intron 30.0%
ACAGACAATTTGTCAAGAAA+AGG - Chr7:67404476-67404495 MsG0780039671.01.T01:intron 30.0%
AGTCCAGTTAAGATTGAAAT+CGG + Chr7:67406308-67406327 None:intergenic 30.0%
ATATCAAACAACAGGTTAGT+TGG - Chr7:67403339-67403358 MsG0780039671.01.T01:intron 30.0%
ATCCAAAATCACCTTAAATG+TGG - Chr7:67406329-67406348 MsG0780039671.01.T01:CDS 30.0%
ATGCCTGTTTAATGAAAAAC+TGG - Chr7:67404234-67404253 MsG0780039671.01.T01:intron 30.0%
ATTAAGAGTGAGATATGCTT+TGG + Chr7:67405355-67405374 None:intergenic 30.0%
ATTATTCAGTGACATCAAAG+AGG - Chr7:67403932-67403951 MsG0780039671.01.T01:intron 30.0%
ATTGACAAGTAGCATATTCA+TGG - Chr7:67405933-67405952 MsG0780039671.01.T01:intron 30.0%
CAATCACTACTTGATGAAAA+CGG - Chr7:67404618-67404637 MsG0780039671.01.T01:intron 30.0%
CCAAAAACCACAATATAACT+TGG - Chr7:67402685-67402704 MsG0780039671.01.T01:intron 30.0%
GAATTCAGAGAAGAAAACTT+AGG - Chr7:67402806-67402825 MsG0780039671.01.T01:intron 30.0%
GAGCATACATAAATCATCTT+AGG - Chr7:67404767-67404786 MsG0780039671.01.T01:intron 30.0%
GATTTATGTATGCTCCTAAT+TGG + Chr7:67404762-67404781 None:intergenic 30.0%
GTAGAACTGTCAGTTATTTA+TGG - Chr7:67403025-67403044 MsG0780039671.01.T01:CDS 30.0%
TAAGATTATGGCCACATTTA+AGG + Chr7:67406343-67406362 None:intergenic 30.0%
TATTTATGGCTTCCGTTTAA+GGG - Chr7:67403039-67403058 MsG0780039671.01.T01:CDS 30.0%
TTAGCTGATGAGAAAAACAA+GGG - Chr7:67402836-67402855 MsG0780039671.01.T01:intron 30.0%
TTATTTATGGCTTCCGTTTA+AGG - Chr7:67403038-67403057 MsG0780039671.01.T01:CDS 30.0%
TTCGTTTATGAGGAGATTAA+GGG - Chr7:67403664-67403683 MsG0780039671.01.T01:intron 30.0%
TTTCATCAAGTAGTGATTGT+AGG + Chr7:67404617-67404636 None:intergenic 30.0%
TTTGATGTCACTGAATAATG+TGG + Chr7:67403931-67403950 None:intergenic 30.0%
! AAAATAGAGTGATGGAATCT+GGG - Chr7:67403394-67403413 MsG0780039671.01.T01:intron 30.0%
! AATCCTTGTTTGTGTTTCTA+TGG - Chr7:67405711-67405730 MsG0780039671.01.T01:intron 30.0%
! AGATTCCATCACTCTATTTT+CGG + Chr7:67403394-67403413 None:intergenic 30.0%
! ATTGTTGTTAATTACTCGAG+GGG - Chr7:67406599-67406618 MsG0780039671.01.T01:CDS 30.0%
! CACTAATGGTAATGTTATTG+AGG + Chr7:67405493-67405512 None:intergenic 30.0%
! CATTGTTGTTAATTACTCGA+GGG - Chr7:67406598-67406617 MsG0780039671.01.T01:CDS 30.0%
! CCAAGTTATATTGTGGTTTT+TGG + Chr7:67402688-67402707 None:intergenic 30.0%
! CTTCTTAGTGTTTGATGTTT+TGG + Chr7:67405077-67405096 None:intergenic 30.0%
! CTTGTTATCATTGTGGATTT+GGG - Chr7:67406569-67406588 MsG0780039671.01.T01:CDS 30.0%
! GACTGAGTTATAATTTTTGC+TGG - Chr7:67403478-67403497 MsG0780039671.01.T01:intron 30.0%
! TACCAAGTGCAAAATTTTGT+TGG - Chr7:67406530-67406549 MsG0780039671.01.T01:CDS 30.0%
! TCTTGTTATCATTGTGGATT+TGG - Chr7:67406568-67406587 MsG0780039671.01.T01:CDS 30.0%
! TGGAATTCTTGTTATCATTG+TGG - Chr7:67406562-67406581 MsG0780039671.01.T01:CDS 30.0%
! TTTTCTTGGCAATTTGTGAT+CGG - Chr7:67403762-67403781 MsG0780039671.01.T01:intron 30.0%
!! CATATTTAGGTTCACTTTTG+AGG + Chr7:67404968-67404987 None:intergenic 30.0%
!!! CTTTGTTTTGTTTTGACGAA+AGG + Chr7:67402714-67402733 None:intergenic 30.0%
AAATGTGCCTAAAGAGCAAT+GGG - Chr7:67405646-67405665 MsG0780039671.01.T01:intron 35.0%
AACATTACCATTAGTGCGAA+TGG - Chr7:67405497-67405516 MsG0780039671.01.T01:intron 35.0%
AAGATTACCATAAGTGCCAA+TGG - Chr7:67402187-67402206 MsG0780039671.01.T01:intron 35.0%
AAGGGTTCCAAGTTATATTG+TGG + Chr7:67402695-67402714 None:intergenic 35.0%
ACACTTAACAGTTTCCAGAA+AGG - Chr7:67402055-67402074 MsG0780039671.01.T01:CDS 35.0%
ATCACAAATCAGTTGAAAGC+AGG - Chr7:67403602-67403621 MsG0780039671.01.T01:intron 35.0%
ATCCAAAATCACCTCATATG+TGG - Chr7:67403294-67403313 MsG0780039671.01.T01:intron 35.0%
ATTTCTTAGTGAAGAAGGCA+AGG + Chr7:67406402-67406421 None:intergenic 35.0%
CTGTTTAATGAAAAACTGGC+TGG - Chr7:67404238-67404257 MsG0780039671.01.T01:intron 35.0%
CTTCGTTTATGAGGAGATTA+AGG - Chr7:67403663-67403682 MsG0780039671.01.T01:intron 35.0%
GACTCATTTCTTAGTGAAGA+AGG + Chr7:67406407-67406426 None:intergenic 35.0%
GATTCTGATTGTTGTGTACA+AGG - Chr7:67405282-67405301 MsG0780039671.01.T01:intron 35.0%
GCTAAAAAATGCAACCCTAA+TGG + Chr7:67404448-67404467 None:intergenic 35.0%
GCTTATTGCAAATGCAAGTA+TGG - Chr7:67403637-67403656 MsG0780039671.01.T01:intron 35.0%
GTTAGCTGATGAGAAAAACA+AGG - Chr7:67402835-67402854 MsG0780039671.01.T01:intron 35.0%
TAAATGTGCCTAAAGAGCAA+TGG - Chr7:67405645-67405664 MsG0780039671.01.T01:intron 35.0%
TAGCTGATGAGAAAAACAAG+GGG - Chr7:67402837-67402856 MsG0780039671.01.T01:intron 35.0%
TCTCCGATTTCAATCTTAAC+TGG - Chr7:67406302-67406321 MsG0780039671.01.T01:CDS 35.0%
TTAGGATCCAAAATCTTGAC+TGG - Chr7:67403267-67403286 MsG0780039671.01.T01:intron 35.0%
TTAGTATGAGTAGACACTGA+CGG + Chr7:67402025-67402044 None:intergenic 35.0%
TTGAAGGAAATATCAAGCTG+CGG + Chr7:67403181-67403200 None:intergenic 35.0%
TTGCGGAGCAAACAAAATAA+GGG - Chr7:67404272-67404291 MsG0780039671.01.T01:intron 35.0%
! ATAAGCCTTATCAACCCTTT+AGG + Chr7:67403097-67403116 None:intergenic 35.0%
! CAACTCCTTCTTAGGTATTT+TGG - Chr7:67403126-67403145 MsG0780039671.01.T01:CDS 35.0%
! CACCAACAAAATTTTGCACT+TGG + Chr7:67406535-67406554 None:intergenic 35.0%
! CAGCCAGTTTTTCATTAAAC+AGG + Chr7:67404240-67404259 None:intergenic 35.0%
! GAAAATAGAGTGATGGAATC+TGG - Chr7:67403393-67403412 MsG0780039671.01.T01:intron 35.0%
! GAAGCATCAACAATGTTGTT+TGG + Chr7:67402295-67402314 None:intergenic 35.0%
! GAAGGGCTTTTATACCATTA+GGG - Chr7:67404431-67404450 MsG0780039671.01.T01:intron 35.0%
! GCATTGTTGTTAATTACTCG+AGG - Chr7:67406597-67406616 MsG0780039671.01.T01:CDS 35.0%
! TATATTGAGGGTACAGTACT+AGG - Chr7:67403805-67403824 MsG0780039671.01.T01:intron 35.0%
! TATTGATTATCACACGCTGA+AGG + Chr7:67402097-67402116 None:intergenic 35.0%
! TCAACAATGTTGTTTGGACA+AGG + Chr7:67402289-67402308 None:intergenic 35.0%
! TGAAGGGCTTTTATACCATT+AGG - Chr7:67404430-67404449 MsG0780039671.01.T01:intron 35.0%
! TGTGGCCATAATCTTAGTTT+TGG - Chr7:67406347-67406366 MsG0780039671.01.T01:CDS 35.0%
! TTGTTGTTAATTACTCGAGG+GGG - Chr7:67406600-67406619 MsG0780039671.01.T01:CDS 35.0%
!! ACTTTTTCCATTCGCACTAA+TGG + Chr7:67405507-67405526 None:intergenic 35.0%
!! GAGAAGAAAACTTAGGTTGA+TGG - Chr7:67402813-67402832 MsG0780039671.01.T01:intron 35.0%
!! GATTAGTCCAGTCAAGATTT+TGG + Chr7:67403277-67403296 None:intergenic 35.0%
!! TATTCATGGCCTTGTATCAT+AGG - Chr7:67405947-67405966 MsG0780039671.01.T01:intron 35.0%
!! TGTCAGTTCGTTTTAATGCT+AGG - Chr7:67406095-67406114 MsG0780039671.01.T01:intron 35.0%
!!! ATTTTTGCTGGTGTCATTGT+TGG - Chr7:67403490-67403509 MsG0780039671.01.T01:intron 35.0%
!!! TAGTTTTGAAAAGGTGGAGA+TGG - Chr7:67405374-67405393 MsG0780039671.01.T01:intron 35.0%
AAACAAGGGGGATTTCAACT+AGG - Chr7:67402850-67402869 MsG0780039671.01.T01:intron 40.0%
AAACCAGTCGTTCTCCAATT+AGG - Chr7:67404745-67404764 MsG0780039671.01.T01:intron 40.0%
AAGGCATATCTCACGCTTAA+CGG + Chr7:67404324-67404343 None:intergenic 40.0%
AATGATGTATGTTGTGTGCC+AGG + Chr7:67404396-67404415 None:intergenic 40.0%
AATGTGCCTAAAGAGCAATG+GGG - Chr7:67405647-67405666 MsG0780039671.01.T01:intron 40.0%
ACATTAAAGGACATGAGCAC+TGG - Chr7:67403838-67403857 MsG0780039671.01.T01:intron 40.0%
AGCTGATGAGAAAAACAAGG+GGG - Chr7:67402838-67402857 MsG0780039671.01.T01:intron 40.0%
ATTCTCGTGTTTCCTTCTGA+AGG - Chr7:67404413-67404432 MsG0780039671.01.T01:intron 40.0%
ATTGTGCCTGCCATCAAATT+AGG + Chr7:67404170-67404189 None:intergenic 40.0%
ATTTCCTTCAATGCACTCAC+AGG - Chr7:67403190-67403209 MsG0780039671.01.T01:intron 40.0%
CAACATTGTTGATGCTTCCA+AGG - Chr7:67402297-67402316 MsG0780039671.01.T01:intron 40.0%
CATCTGACCATGTTATGTCA+AGG + Chr7:67402366-67402385 None:intergenic 40.0%
CTGATGGAAACTGTGTATCT+TGG - Chr7:67406447-67406466 MsG0780039671.01.T01:CDS 40.0%
CTTAACAGTTTCCAGAAAGG+TGG - Chr7:67402058-67402077 MsG0780039671.01.T01:CDS 40.0%
CTTATCAACCCTTTAGGCAT+TGG + Chr7:67403091-67403110 None:intergenic 40.0%
CTTGCATTTGCAATAAGCTC+AGG + Chr7:67403635-67403654 None:intergenic 40.0%
CTTGCGGAGCAAACAAAATA+AGG - Chr7:67404271-67404290 MsG0780039671.01.T01:intron 40.0%
GACTCTGATTGTTGTGTACA+AGG - Chr7:67401971-67401990 MsG0780039671.01.T01:CDS 40.0%
GCTTAACGGTTTCGAAAAAG+TGG + Chr7:67404310-67404329 None:intergenic 40.0%
GGCAGTATCATATTGCATAG+AGG - Chr7:67403434-67403453 MsG0780039671.01.T01:intron 40.0%
GTCAGTGTCTACTCATACTA+AGG - Chr7:67402024-67402043 MsG0780039671.01.T01:CDS 40.0%
TAAGATTGTGGCCACATATG+AGG + Chr7:67403308-67403327 None:intergenic 40.0%
TACTGCTTGTCACATTCTGA+AGG + Chr7:67405407-67405426 None:intergenic 40.0%
TAGTGCGAATGGAAAAAGTG+TGG - Chr7:67405508-67405527 MsG0780039671.01.T01:intron 40.0%
TCAACTGCAGAAAAGTAGTG+CGG + Chr7:67404206-67404225 None:intergenic 40.0%
TCATATTGCATAGAGGCTCA+TGG - Chr7:67403441-67403460 MsG0780039671.01.T01:intron 40.0%
TCTGACCTACCTATGATACA+AGG + Chr7:67405959-67405978 None:intergenic 40.0%
TCTGGAAACTGTTAAGTGTG+AGG + Chr7:67402054-67402073 None:intergenic 40.0%
TCTTTGTTGCATTGTCCAGA+TGG + Chr7:67401947-67401966 None:intergenic 40.0%
TGCCATCACAGGTATATCAT+CGG - Chr7:67404109-67404128 MsG0780039671.01.T01:intron 40.0%
TGCCTTCGTGTAACTAGATA+CGG - Chr7:67404338-67404357 MsG0780039671.01.T01:intron 40.0%
TGGTATAAAAGCCCTTCAGA+AGG + Chr7:67404428-67404447 None:intergenic 40.0%
TTCCGATGATATACCTGTGA+TGG + Chr7:67404114-67404133 None:intergenic 40.0%
TTCTCGTGTTTCCTTCTGAA+GGG - Chr7:67404414-67404433 MsG0780039671.01.T01:intron 40.0%
TTCTCTTGATTGCATTGTCC+TGG + Chr7:67405261-67405280 None:intergenic 40.0%
TTGTTCATCACATCCCTTTG+TGG + Chr7:67405561-67405580 None:intergenic 40.0%
TTTCCTCTAATTCTACCGCT+TGG + Chr7:67405228-67405247 None:intergenic 40.0%
! ACAATGTTGTTTGGACAAGG+AGG + Chr7:67402286-67402305 None:intergenic 40.0%
! GCATTGCTGTCACTTGTAAA+AGG - Chr7:67403545-67403564 MsG0780039671.01.T01:intron 40.0%
!! CAATGCCTAAAGGGTTGATA+AGG - Chr7:67403089-67403108 MsG0780039671.01.T01:CDS 40.0%
!! CAGTTCGTTTTAATGCTAGG+TGG - Chr7:67406098-67406117 MsG0780039671.01.T01:intron 40.0%
!! GCTTTTTCCATTGGCACTTA+TGG + Chr7:67402197-67402216 None:intergenic 40.0%
!! GGCCACATTTAAGGTGATTT+TGG + Chr7:67406334-67406353 None:intergenic 40.0%
!! TTTTGAAAAGGTGGAGATGG+AGG - Chr7:67405377-67405396 MsG0780039671.01.T01:intron 40.0%
!!! AATTTTGTTGGTGTCGTTGC+TGG - Chr7:67406542-67406561 MsG0780039671.01.T01:CDS 40.0%
!!! TGGCAGCAGTTTCGTTTTTT+TGG - Chr7:67403858-67403877 MsG0780039671.01.T01:intron 40.0%
ACCACATGAGTTATACCCCT+TGG + Chr7:67402997-67403016 None:intergenic 45.0%
AGATCAGTTCAAGACTCAGC+AGG - Chr7:67406647-67406666 MsG0780039671.01.T01:CDS 45.0%
AGGTGTGCCTCAAGATCAAT+GGG - Chr7:67402336-67402355 MsG0780039671.01.T01:intron 45.0%
AGTTTCCAGAAAGGTGGAGA+CGG - Chr7:67402064-67402083 MsG0780039671.01.T01:CDS 45.0%
ATCATGCTTCTGCATGCTGT+TGG - Chr7:67406211-67406230 MsG0780039671.01.T01:CDS 45.0%
CACTACCTCCAATGCCTAAA+GGG - Chr7:67403080-67403099 MsG0780039671.01.T01:CDS 45.0%
CATATTGCACAGAGACTCGT+GGG - Chr7:67406495-67406514 MsG0780039671.01.T01:CDS 45.0%
CCATCAAATTAGGTGACGCA+TGG + Chr7:67404160-67404179 None:intergenic 45.0%
CCATGCGTCACCTAATTTGA+TGG - Chr7:67404157-67404176 MsG0780039671.01.T01:intron 45.0%
CGAGTCCGAAAATAGAGTGA+TGG - Chr7:67403386-67403405 MsG0780039671.01.T01:intron 45.0%
CGGTTTCGAAAAAGTGGAGA+TGG + Chr7:67404304-67404323 None:intergenic 45.0%
CTAAGAAGGAGTTGCAGTTG+AGG + Chr7:67403120-67403139 None:intergenic 45.0%
CTCAACTGCAACTCCTTCTT+AGG - Chr7:67403118-67403137 MsG0780039671.01.T01:CDS 45.0%
GACTCGTTGCTTAGAGAAGA+AGG + Chr7:67403372-67403391 None:intergenic 45.0%
GATCAGTTCAAGACTCAGCA+GGG - Chr7:67406648-67406667 MsG0780039671.01.T01:CDS 45.0%
GATGAGTGCGACTCTACAAT+GGG - Chr7:67402235-67402254 MsG0780039671.01.T01:intron 45.0%
GATGAGTGTGACTCCACAAA+GGG - Chr7:67405545-67405564 MsG0780039671.01.T01:intron 45.0%
GCCTTCGTGTAACTAGATAC+GGG - Chr7:67404339-67404358 MsG0780039671.01.T01:intron 45.0%
GCTCTTGTCATTGAACCATC+CGG + Chr7:67402155-67402174 None:intergenic 45.0%
GCTGAGTCTTGAACTGATCT+GGG + Chr7:67406647-67406666 None:intergenic 45.0%
GTATGGCGTCTTCGTTTATG+AGG - Chr7:67403654-67403673 MsG0780039671.01.T01:intron 45.0%
GTTGCTTAGAGAAGAAGGCA+AGG + Chr7:67403367-67403386 None:intergenic 45.0%
TAAAGCTTTCCACACAGCCT+TGG + Chr7:67405627-67405646 None:intergenic 45.0%
TAGGTGTGCCTCAAGATCAA+TGG - Chr7:67402335-67402354 MsG0780039671.01.T01:intron 45.0%
TCAAATTAGGTGACGCATGG+CGG + Chr7:67404157-67404176 None:intergenic 45.0%
TCACTACCTCCAATGCCTAA+AGG - Chr7:67403079-67403098 MsG0780039671.01.T01:CDS 45.0%
TCATATTGCACAGAGACTCG+TGG - Chr7:67406494-67406513 MsG0780039671.01.T01:CDS 45.0%
TCGTCCAAACGGTAGAATCA+GGG - Chr7:67401910-67401929 MsG0780039671.01.T01:CDS 45.0%
TCTTGATTGCATTGTCCTGG+AGG + Chr7:67405258-67405277 None:intergenic 45.0%
TGATGAGTGCGACTCTACAA+TGG - Chr7:67402234-67402253 MsG0780039671.01.T01:intron 45.0%
TGATGAGTGTGACTCCACAA+AGG - Chr7:67405544-67405563 MsG0780039671.01.T01:intron 45.0%
TGCTGAGTCTTGAACTGATC+TGG + Chr7:67406648-67406667 None:intergenic 45.0%
TTCGTGTAACTAGATACGGG+CGG - Chr7:67404342-67404361 MsG0780039671.01.T01:intron 45.0%
TTGATCTTGAGGCACACCTA+AGG + Chr7:67402335-67402354 None:intergenic 45.0%
TTGGTGTGAGTAGACACTGA+TGG + Chr7:67405336-67405355 None:intergenic 45.0%
TTGTTGCACTTTCAACCGGA+TGG - Chr7:67405447-67405466 MsG0780039671.01.T01:intron 45.0%
TTTCCCCTGATTCTACCGTT+TGG + Chr7:67401917-67401936 None:intergenic 45.0%
! AACAGCATGCAGAAGCATGA+TGG + Chr7:67406212-67406231 None:intergenic 45.0%
! AATGAAAAACTGGCTGGCTC+TGG - Chr7:67404244-67404263 MsG0780039671.01.T01:intron 45.0%
! ACCGTTTGGACGACACTTTT+GGG + Chr7:67401903-67401922 None:intergenic 45.0%
! GGCCACATATGAGGTGATTT+TGG + Chr7:67403299-67403318 None:intergenic 45.0%
! TACCGTTTGGACGACACTTT+TGG + Chr7:67401904-67401923 None:intergenic 45.0%
! TCCAAGGGGTATAACTCATG+TGG - Chr7:67402993-67403012 MsG0780039671.01.T01:CDS 45.0%
! TCCGGTTGAAAGTGCAACAA+CGG + Chr7:67405447-67405466 None:intergenic 45.0%
! TGCCAATGGAAAAAGCGTAG+AGG - Chr7:67402201-67402220 MsG0780039671.01.T01:intron 45.0%
! TGCGAATGGAAAAAGTGTGG+TGG - Chr7:67405511-67405530 MsG0780039671.01.T01:intron 45.0%
! TGTTGTTTGGACAAGGAGGT+TGG + Chr7:67402282-67402301 None:intergenic 45.0%
! TTTGATGGCAGGCACAATTC+TGG - Chr7:67404172-67404191 MsG0780039671.01.T01:intron 45.0%
!! ATCAACCCTTTAGGCATTGG+AGG + Chr7:67403088-67403107 None:intergenic 45.0%
!! CAGAAAGAAAGTGCCATCAC+AGG - Chr7:67404098-67404117 MsG0780039671.01.T01:intron 45.0%
!! CATGGCCTTGTATCATAGGT+AGG - Chr7:67405951-67405970 MsG0780039671.01.T01:intron 45.0%
!! ATATTAAATAAAATATTGTA+AGG - Chr7:67404572-67404591 MsG0780039671.01.T01:intron 5.0%
!!! AAAATTTAAACATTATATTT+TGG + Chr7:67406020-67406039 None:intergenic 5.0%
AAGGCTGTGTGGAAAGCCTT+AGG - Chr7:67402316-67402335 MsG0780039671.01.T01:intron 50.0%
AGACCACCCCATTGCTCTTT+AGG + Chr7:67405656-67405675 None:intergenic 50.0%
AGAGGAAAGAAAGCTCCTCC+AGG - Chr7:67405240-67405259 MsG0780039671.01.T01:intron 50.0%
AGGGGAAAGAAAGCTCCATC+TGG - Chr7:67401929-67401948 MsG0780039671.01.T01:CDS 50.0%
AGTGCCTGTGAGTGCATTGA+AGG + Chr7:67403197-67403216 None:intergenic 50.0%
CAAATTAGGTGACGCATGGC+GGG + Chr7:67404156-67404175 None:intergenic 50.0%
CCAGTTGTTGCACTTTCCAC+CGG - Chr7:67402133-67402152 MsG0780039671.01.T01:intron 50.0%
CCCGTTGTTGCACTTTCAAC+CGG - Chr7:67405443-67405462 MsG0780039671.01.T01:intron 50.0%
CGTCCAAACGGTAGAATCAG+GGG - Chr7:67401911-67401930 MsG0780039671.01.T01:CDS 50.0%
CGTCCAAGCGGTAGAATTAG+AGG - Chr7:67405222-67405241 MsG0780039671.01.T01:intron 50.0%
CTTGTCATTGAACCATCCGG+TGG + Chr7:67402152-67402171 None:intergenic 50.0%
GATGGTTCAACCACAAGAGC+AGG - Chr7:67405465-67405484 MsG0780039671.01.T01:intron 50.0%
GCCCGTATCTAGTTACACGA+AGG + Chr7:67404343-67404362 None:intergenic 50.0%
GCTCCTAATTGGAGAACGAC+TGG + Chr7:67404751-67404770 None:intergenic 50.0%
GCTCTTGTGGTTGAACCATC+CGG + Chr7:67405465-67405484 None:intergenic 50.0%
GGTGTGCCTCAAGATCAATG+GGG - Chr7:67402337-67402356 MsG0780039671.01.T01:intron 50.0%
GTCACACTCATCAACCACCA+TGG + Chr7:67405537-67405556 None:intergenic 50.0%
GTCGTCCAAACGGTAGAATC+AGG - Chr7:67401909-67401928 MsG0780039671.01.T01:CDS 50.0%
TAAGGCTTTCCACACAGCCT+TGG + Chr7:67402317-67402336 None:intergenic 50.0%
TGAAAAGGTGGAGATGGAGG+TGG - Chr7:67405380-67405399 MsG0780039671.01.T01:intron 50.0%
TTGATGCTTCCAAGGCTGTG+TGG - Chr7:67402305-67402324 MsG0780039671.01.T01:intron 50.0%
TTGTTGCACTTTCCACCGGA+TGG - Chr7:67402137-67402156 MsG0780039671.01.T01:intron 50.0%
! AAAAAGTGTGGTGGCCATGG+TGG - Chr7:67405520-67405539 MsG0780039671.01.T01:intron 50.0%
! CCGGTTGAAAGTGCAACAAC+GGG + Chr7:67405446-67405465 None:intergenic 50.0%
! GCGTCACCTAATTTGATGGC+AGG - Chr7:67404161-67404180 MsG0780039671.01.T01:intron 50.0%
! GGGGTGGTCTTGACATTACA+TGG - Chr7:67405666-67405685 MsG0780039671.01.T01:intron 50.0%
! TATTGAGGCACCTGCTCTTG+TGG + Chr7:67405478-67405497 None:intergenic 50.0%
! TGGAAAAAGCGTAGAGGCCA+CGG - Chr7:67402207-67402226 MsG0780039671.01.T01:intron 50.0%
! TGGAAAAAGTGTGGTGGCCA+TGG - Chr7:67405517-67405536 MsG0780039671.01.T01:intron 50.0%
!! GCCCAAAAGTGTCGTCCAAA+CGG - Chr7:67401899-67401918 MsG0780039671.01.T01:CDS 50.0%
!! TGCAACAACGGGAGTGTCAT+CGG + Chr7:67405435-67405454 None:intergenic 50.0%
!! TGGACGACAGTTCTGAGCTT+CGG + Chr7:67405208-67405227 None:intergenic 50.0%
!!! GGCCTCTACGCTTTTTCCAT+TGG + Chr7:67402206-67402225 None:intergenic 50.0%
AGGCCACCCCATTGATCTTG+AGG + Chr7:67402346-67402365 None:intergenic 55.0%
CACAGAGACTCGTGGGAAGA+CGG - Chr7:67406502-67406521 MsG0780039671.01.T01:CDS 55.0%
GCTCAGAACTGTCGTCCAAG+CGG - Chr7:67405210-67405229 MsG0780039671.01.T01:intron 55.0%
GTGCCTAAAGAGCAATGGGG+TGG - Chr7:67405650-67405669 MsG0780039671.01.T01:intron 55.0%
GTGCCTCAAGATCAATGGGG+TGG - Chr7:67402340-67402359 MsG0780039671.01.T01:intron 55.0%
TTCCAGAAAGGTGGAGACGG+AGG - Chr7:67402067-67402086 MsG0780039671.01.T01:CDS 55.0%
! AAAAAGCGTAGAGGCCACGG+TGG - Chr7:67402210-67402229 MsG0780039671.01.T01:intron 55.0%
! CCGGTGGAAAGTGCAACAAC+TGG + Chr7:67402136-67402155 None:intergenic 55.0%
! GGGGTGGCCTTGACATAACA+TGG - Chr7:67402356-67402375 MsG0780039671.01.T01:intron 55.0%
CAGAAAGGTGGAGACGGAGG+CGG - Chr7:67402070-67402089 MsG0780039671.01.T01:CDS 60.0%
GTCGCACTCATCAACCACCG+TGG + Chr7:67402227-67402246 None:intergenic 60.0%
! TGGGAGTGTGCAGCATCAGC+AGG - Chr7:67403413-67403432 MsG0780039671.01.T01:intron 60.0%
!! GGCTGGCTCTGGCTATCTTG+CGG - Chr7:67404255-67404274 MsG0780039671.01.T01:intron 60.0%
CGCCTCCGTCTCCACCTTTC+TGG + Chr7:67402072-67402091 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 67401824 67406715 67401824 ID=MsG0780039671.01;Name=MsG0780039671.01
Chr7 mRNA 67401824 67406715 67401824 ID=MsG0780039671.01.T01;Parent=MsG0780039671.01;Name=MsG0780039671.01.T01;_AED=0.50;_eAED=0.69;_QI=0|0|0|1|1|1|5|0|462
Chr7 exon 67406162 67406715 67406162 ID=MsG0780039671.01.T01:exon:13883;Parent=MsG0780039671.01.T01
Chr7 exon 67405102 67405186 67405102 ID=MsG0780039671.01.T01:exon:13882;Parent=MsG0780039671.01.T01
Chr7 exon 67404886 67405006 67404886 ID=MsG0780039671.01.T01:exon:13881;Parent=MsG0780039671.01.T01
Chr7 exon 67402852 67403152 67402852 ID=MsG0780039671.01.T01:exon:13880;Parent=MsG0780039671.01.T01
Chr7 exon 67401824 67402151 67401824 ID=MsG0780039671.01.T01:exon:13879;Parent=MsG0780039671.01.T01
Chr7 CDS 67406162 67406715 67406162 ID=MsG0780039671.01.T01:cds;Parent=MsG0780039671.01.T01
Chr7 CDS 67405102 67405186 67405102 ID=MsG0780039671.01.T01:cds;Parent=MsG0780039671.01.T01
Chr7 CDS 67404886 67405006 67404886 ID=MsG0780039671.01.T01:cds;Parent=MsG0780039671.01.T01
Chr7 CDS 67402852 67403152 67402852 ID=MsG0780039671.01.T01:cds;Parent=MsG0780039671.01.T01
Chr7 CDS 67401824 67402151 67401824 ID=MsG0780039671.01.T01:cds;Parent=MsG0780039671.01.T01
Gene Sequence

>MsG0780039671.01.T01

ATGAAGAGCTTTTTCCCCAAAGTTTCTTTTCTTTTGTTGATTACTCTTATTTTAACAAGTTGTGTGTATTCTGAAGCCCAAAAGTGTCGTCCAAACGGTAGAATCAGGGGAAAGAAAGCTCCATCTGGACAATGCAACAAAGAGAATGACTCTGATTGTTGTGTACAAGGAAAAATGTACACAACTTATGAATGTTCACCGTCAGTGTCTACTCATACTAAGGCATACCTCACACTTAACAGTTTCCAGAAAGGTGGAGACGGAGGCGGACCTTCAGCGTGTGATAATCAATATCATTCTGATGACACTCCAGTTGTTGCACTTTCCACCGGATGGTTCAATGACAAGAGCAGATGTCTCAACAAGATTACCATAAGTGCCAATGGAAAAAGCGTAGAGGCCACGGTGGTTGATGAGTGCGACTCTACAATGGGATGTGATGAAGAACATGATTACCAACCTCCTTGTCCAAACAACATTGTTGATGCTTCCAAGGCTGTGTGGAAAGCCTTAGGTGTGCCTCAAGATCAATGGGGTGGCCTTGACATAACATGGTTAGTTGGAGCCTTGCCTTCTTCTCTAAGCAACGAGTCCGAAAATAGAGTGATGGAATCTGGGAGTGTGCAGCATCAGCAGGCATTTTGGGATTATGCATTGCTGTCACTTGTAAAAGGTATTACTTTAGATGGATTTGAGAGCAGCATTTATATCACAAATCAGTTGAAAGCAGGATTCTCACCTGAGCTTATTGCAAATGCAAGTGGAGATGGAGGTGGTCCTTCAGAATGTGACAAGCAGTATCATTCCGATGACACTCCCGTTGTTGCACTTTCAACCGGATGGTTCAACCACAAGAGCAGGTGCCTCAATAACATTACCATTAGTGCGAATGGAAAAAGTGTGGTGGCCATGGTGGTTGATGAGTGTGACTCCACAAAGGGATGTGATGAACAACATGATTACCAACCTCCTTGTCCAAACAACATTGTTGATGCTTCCAAGGCTGTGTGGAAAGCTTTAAATGTGCCTAAAGAGCAATGGGGTGGTCTTGACATTACATGGTTAGTCGGAGCCTTGCCTTCTTCACTAAGAAATGAGTCAGAAAATAGAGTTGTTAAGACTGATGGAAACTGTGTATCTTGGAGTGCGCAGCATCATCATGCAGTATCATATTGCACAGAGACTCGTGGGAAGACGGAATCGTACCAAGTGCAAAATTTTGTTGGTGTCGTTGCTGGAATTCTTGTTATCATTGTGGATTTGGGTTTATGCATTGTTGTTAATTACTCGAGGGGGATTTCAAAGCAGCATCTATTGCCCAGATCAGTTCAAGACTCAGCAGGGTTCTCATCTGAGCTTATTGCAAATGCAAATGCAATTCATTCATGA
Protein sequence

>MsG0780039671.01.T01

MKSFFPKVSFLLLITLILTSCVYSEAQKCRPNGRIRGKKAPSGQCNKENDSDCCVQGKMYTTYECSPSVSTHTKAYLTLNSFQKGGDGGGPSACDNQYHSDDTPVVALSTGWFNDKSRCLNKITISANGKSVEATVVDECDSTMGCDEEHDYQPPCPNNIVDASKAVWKALGVPQDQWGGLDITWLVGALPSSLSNESENRVMESGSVQHQQAFWDYALLSLVKGITLDGFESSIYITNQLKAGFSPELIANASGDGGGPSECDKQYHSDDTPVVALSTGWFNHKSRCLNNITISANGKSVVAMVVDECDSTKGCDEQHDYQPPCPNNIVDASKAVWKALNVPKEQWGGLDITWLVGALPSSLRNESENRVVKTDGNCVSWSAQHHHAVSYCTETRGKTESYQVQNFVGVVAGILVIIVDLGLCIVVNYSRGISKQHLLPRSVQDSAGFSSELIANANAIHS*