AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039771.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039771.01.T01 MTR_7g079030 88.588 517 46 3 1 504 1 517 0.0 915
MsG0780039771.01.T01 MTR_7g079030 96.953 361 11 0 144 504 3 363 0.0 735
MsG0780039771.01.T01 MTR_7g079030 85.867 375 40 3 1 362 1 375 0.0 629
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039771.01.T01 AT3G61540 69.365 457 124 4 61 504 62 515 0.0 641

Find 136 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGGACCTTGGACAATTT+TGG 0.126771 7:+68935446 MsG0780039771.01.T01:CDS
GCATAGGTGGCCCTTCCTTC+TGG 0.157533 7:+68936007 MsG0780039771.01.T01:intron
ATGCCTGAATGTCATATAAT+TGG 0.164206 7:-68937280 None:intergenic
ACTAATGAGTTCATGCATTC+TGG 0.269501 7:+68937565 MsG0780039771.01.T01:CDS
ATTTCAGCAAATATAATAAT+AGG 0.272494 7:-68937794 None:intergenic
CATAGGTGGCCCTTCCTTCT+GGG 0.305590 7:+68936008 MsG0780039771.01.T01:intron
ATGGTATTACTGGTGAAATT+TGG 0.305778 7:+68934632 MsG0780039771.01.T01:CDS
TACCGTATGTCATATGAAAC+TGG 0.307739 7:-68934658 None:intergenic
GTCCCAATTATATGACATTC+AGG 0.308263 7:+68937277 MsG0780039771.01.T01:CDS
GTGGGATCCTACTTTAGTTC+CGG 0.328918 7:+68936210 MsG0780039771.01.T01:CDS
AAGTAGTGACTTATTCTCTT+AGG 0.335186 7:-68936238 None:intergenic
ATTGTCCAAGGTCCAGCATT+TGG 0.342399 7:-68935441 None:intergenic
AAGAGTGACGAGGATGAAAT+TGG 0.342596 7:-68933602 None:intergenic
CAAGAGTCTGCAGCCCTCTT+GGG 0.345042 7:-68936042 None:intergenic
CCAAGAGTCTGCAGCCCTCT+TGG 0.358001 7:-68936043 None:intergenic
GGTCTCTCTGGCTTAGGATC+TGG 0.360506 7:+68936064 MsG0780039771.01.T01:CDS
ATGGCTTTAGATGGTATTAC+TGG 0.365307 7:+68934622 MsG0780039771.01.T01:CDS
TGGGATCCTACTTTAGTTCC+GGG 0.370052 7:+68936211 MsG0780039771.01.T01:CDS
GATGGTCTGCCAGTAGAATA+AGG 0.370734 7:+68936807 MsG0780039771.01.T01:CDS
CAAAGTTCTTGATCATTTGT+TGG 0.375660 7:+68937606 MsG0780039771.01.T01:CDS
TCCTAGCGTTGCCTAGCCTT+TGG 0.377305 7:+68937705 MsG0780039771.01.T01:three_prime_UTR
CTGCAGACTCTTGGTCTCTC+TGG 0.384271 7:+68936052 MsG0780039771.01.T01:CDS
TTCGCTCGTGAAGTTGTTGC+AGG 0.393688 7:+68933864 MsG0780039771.01.T01:CDS
TACATCTTTGAATGGTTTCA+AGG 0.395179 7:-68937225 None:intergenic
GCAGTGCATCCATGTCCTAT+TGG 0.395461 7:-68935761 None:intergenic
CATTTGTTGGGAATGTTAAA+CGG 0.404860 7:+68937619 MsG0780039771.01.T01:CDS
AAAGTTCTTGATCATTTGTT+GGG 0.410247 7:+68937607 MsG0780039771.01.T01:CDS
ACATAAAACATTGGTGGGAC+TGG 0.418718 7:-68937683 None:intergenic
ACTTCTCTGCAGCGAGGAAC+AGG 0.422644 7:+68935288 MsG0780039771.01.T01:CDS
AACTTCAGTCCTTATTCTAC+TGG 0.423287 7:-68936816 None:intergenic
GTTCGCCTTGTTCCAAATGC+TGG 0.428426 7:+68935429 MsG0780039771.01.T01:CDS
ACTCTTGGTCTCTCTGGCTT+AGG 0.428598 7:+68936058 MsG0780039771.01.T01:CDS
CAATCTCCGGTGACATGCTC+CGG 0.430327 7:-68933747 None:intergenic
CCAAGAGGGCTGCAGACTCT+TGG 0.439564 7:+68936043 MsG0780039771.01.T01:CDS
TAATAAACGGCAGCTGCAAC+AGG 0.439828 7:-68937469 None:intergenic
GACATGCTCCGGCGAGGAGG+TGG 0.441501 7:-68933736 None:intergenic
GAAACAGCTTCTCAAATAGC+TGG 0.441550 7:+68937526 MsG0780039771.01.T01:CDS
ATACATGTCTTCATAATAAA+CGG 0.444263 7:-68937482 None:intergenic
ATAGGCGACATGGCTTTAGA+TGG 0.445232 7:+68934613 MsG0780039771.01.T01:intron
TTGGGACCAATCCTTCTTCT+CGG 0.448445 7:-68937261 None:intergenic
ATTCTGGCTTGCGTGATGAC+GGG 0.451939 7:+68937581 MsG0780039771.01.T01:CDS
TGCGTGAGCTTCGGTGAGAA+AGG 0.454517 7:-68933674 None:intergenic
TCATTGGAATGCGTGAGCTT+CGG 0.455215 7:-68933683 None:intergenic
TGCCTGAATGTCATATAATT+GGG 0.462537 7:-68937279 None:intergenic
ATGCTCCGGCGAGGAGGTGG+AGG 0.463493 7:-68933733 None:intergenic
CTCCGGCGAGGAGGTGGAGG+AGG 0.463882 7:-68933730 None:intergenic
ATATGAGCTACATCTTTGAA+TGG 0.468347 7:-68937233 None:intergenic
CGGAGCATGTCACCGGAGAT+TGG 0.471151 7:+68933748 MsG0780039771.01.T01:CDS
TCATATACTGTCCGAGAAGA+AGG 0.473550 7:+68937250 MsG0780039771.01.T01:CDS
GCAATTAAAGCTGCTAAAGA+AGG 0.476169 7:+68936854 MsG0780039771.01.T01:CDS
ATATTTGCTGAAATAATGTC+AGG 0.476978 7:+68937803 MsG0780039771.01.T01:three_prime_UTR
TTTAAATTATGGCAGAGTTA+CGG 0.478103 7:+68935662 MsG0780039771.01.T01:intron
TCAATGTCACAATTCAAGTC+TGG 0.485879 7:+68935336 MsG0780039771.01.T01:CDS
CTTCTCAAATAGCTGGGATC+AGG 0.486016 7:+68937533 MsG0780039771.01.T01:CDS
AACAATGGTGATCAAAATAG+AGG 0.490017 7:-68937649 None:intergenic
CTCCTCCTCCACCTCCTCGC+CGG 0.492725 7:+68933728 MsG0780039771.01.T01:CDS
ACATGAATCCATCTATTGTC+AGG 0.493822 7:+68936401 MsG0780039771.01.T01:CDS
CATTCTGGCTTGCGTGATGA+CGG 0.495763 7:+68937580 MsG0780039771.01.T01:CDS
TCTGGCTTAGGATCTGGAGC+TGG 0.499369 7:+68936070 MsG0780039771.01.T01:CDS
CTTATTCTCTTAGGTGATCC+CGG 0.501387 7:-68936229 None:intergenic
ACCGGTGGAATTCCTCCAAT+AGG 0.501435 7:+68935746 MsG0780039771.01.T01:CDS
TCCTCGCCGGAGCATGTCAC+CGG 0.504160 7:+68933741 MsG0780039771.01.T01:CDS
GAGGAATTCCACCGGTCAGA+AGG 0.505211 7:-68935739 None:intergenic
ATAGGTGGCCCTTCCTTCTG+GGG 0.506672 7:+68936009 MsG0780039771.01.T01:intron
CGAGGAGGTGGAGGAGGAGA+CGG 0.509853 7:-68933724 None:intergenic
AAATAGCTGGGATCAGGCTA+TGG 0.511594 7:+68937539 MsG0780039771.01.T01:CDS
TGCAGGGTTCTGCTAGTAGA+TGG 0.513146 7:+68936789 MsG0780039771.01.T01:intron
TTTCTAGGTTTGAGAGAGTG+TGG 0.523426 7:+68936191 MsG0780039771.01.T01:intron
CATAAAACATTGGTGGGACT+GGG 0.527966 7:-68937682 None:intergenic
GCGATGGTAAGTCCGTTCAT+TGG 0.527986 7:-68933699 None:intergenic
GGAGGAGGAGACGGTGGCGA+TGG 0.529291 7:-68933715 None:intergenic
TTCTGGCTTGCGTGATGACG+GGG 0.530180 7:+68937582 MsG0780039771.01.T01:CDS
TGAATCTCATCAAACATCCA+TGG 0.532905 7:-68937200 None:intergenic
TTGTTCCAAATGCTGGACCT+TGG 0.539407 7:+68935436 MsG0780039771.01.T01:CDS
GCAGAGAAGTACATAAGTAA+TGG 0.541788 7:-68935275 None:intergenic
AGGGCTTGCGTCAGCCCTTG+TGG 0.543083 7:-68935719 None:intergenic
CTGACGCAAGCCCTTCTGAC+CGG 0.547262 7:+68935728 MsG0780039771.01.T01:CDS
TACTGTCCGAGAAGAAGGAT+TGG 0.549609 7:+68937255 MsG0780039771.01.T01:CDS
TCCCAGTTTCATATGACATA+CGG 0.553514 7:+68934656 MsG0780039771.01.T01:CDS
GCGTGAGCTTCGGTGAGAAA+GGG 0.558381 7:-68933673 None:intergenic
GTCCCTCTCGATTACTCTCA+AGG 0.558596 7:+68933813 MsG0780039771.01.T01:CDS
GAATCTCATCAAACATCCAT+GGG 0.559504 7:-68937199 None:intergenic
GGTGATCCCGGAACTAAAGT+AGG 0.561474 7:-68936217 None:intergenic
TAGCTGAACAAGAAGGAGGA+GGG 0.562297 7:+68935891 MsG0780039771.01.T01:CDS
TTCTAGGTTTGAGAGAGTGT+GGG 0.563972 7:+68936192 MsG0780039771.01.T01:intron
AATTATTTAGCTGAACAAGA+AGG 0.568672 7:+68935884 MsG0780039771.01.T01:CDS
AAGAGTCTGCAGCCCTCTTG+GGG 0.573534 7:-68936041 None:intergenic
AAGGTCCAGCATTTGGAACA+AGG 0.574892 7:-68935434 None:intergenic
TTAGCTGAACAAGAAGGAGG+AGG 0.575861 7:+68935890 MsG0780039771.01.T01:CDS
GGTGAGAAAGGGAGAGTCTG+AGG 0.576570 7:-68933662 None:intergenic
ACGCAAGCCCTTCTGACCGG+TGG 0.577852 7:+68935731 MsG0780039771.01.T01:CDS
AAACAGCTTCTCAAATAGCT+GGG 0.579714 7:+68937527 MsG0780039771.01.T01:CDS
TAGGTGGCCCTTCCTTCTGG+GGG 0.580614 7:+68936010 MsG0780039771.01.T01:intron
GTGCATCCATGTCCTATTGG+AGG 0.585173 7:-68935758 None:intergenic
GTTTGTTTGGATAGGCGACA+TGG 0.589949 7:+68934603 MsG0780039771.01.T01:intron
TCCTATTGGAGGAATTCCAC+CGG 0.590937 7:-68935747 None:intergenic
GTGAGAAAGGGAGAGTCTGA+GGG 0.591149 7:-68933661 None:intergenic
GTACTACAAAAGATACCCTC+AGG 0.591325 7:+68935835 MsG0780039771.01.T01:CDS
CTAGGACATAAAACATTGGT+GGG 0.597187 7:-68937688 None:intergenic
ACGAAGACGGAGTGAAGGTA+CGG 0.607003 7:-68933775 None:intergenic
AGCTGAACAAGAAGGAGGAG+GGG 0.607085 7:+68935892 MsG0780039771.01.T01:CDS
GGAATTCCTCCAATAGGACA+TGG 0.607220 7:+68935752 MsG0780039771.01.T01:CDS
AGGTACGGAGAACCAATCTC+CGG 0.607535 7:-68933760 None:intergenic
GGTGACATGCTCCGGCGAGG+AGG 0.609169 7:-68933739 None:intergenic
ACCAAAGGCTAGGCAACGCT+AGG 0.611720 7:-68937706 None:intergenic
ACCTGCCCCAAAATTGTCCA+AGG 0.613042 7:-68935453 None:intergenic
AGCTCACGCATTCCAATGAA+CGG 0.613457 7:+68933687 MsG0780039771.01.T01:CDS
ACCGTATGTCATATGAAACT+GGG 0.616100 7:-68934657 None:intergenic
GGAGGTGGAGGAGGAGACGG+TGG 0.618074 7:-68933721 None:intergenic
ACAGTCTTCGACTAAGATCA+CGG 0.618266 7:+68933839 MsG0780039771.01.T01:CDS
TGATCTTAGTCGAAGACTGT+AGG 0.619626 7:-68933836 None:intergenic
GCTAGGACATAAAACATTGG+TGG 0.619882 7:-68937689 None:intergenic
AGGAATTCCACCGGTCAGAA+GGG 0.624664 7:-68935738 None:intergenic
TTGCTGAAATAATGTCAGGT+TGG 0.626141 7:+68937807 MsG0780039771.01.T01:three_prime_UTR
TCTGGCTTGCGTGATGACGG+GGG 0.627112 7:+68937583 MsG0780039771.01.T01:CDS
CTGGGAGAGAAGAGTAACAA+TGG 0.631254 7:-68937664 None:intergenic
TCCGGTGACATGCTCCGGCG+AGG 0.640777 7:-68933742 None:intergenic
TGAATCTGTGATCACGAAGA+CGG 0.643417 7:-68933788 None:intergenic
AAATTATGGCAGAGTTACGG+TGG 0.644222 7:+68935665 MsG0780039771.01.T01:intron
TATTTAGCTGAACAAGAAGG+AGG 0.644860 7:+68935887 MsG0780039771.01.T01:CDS
GGCCTTGAGAGTAATCGAGA+GGG 0.652247 7:-68933815 None:intergenic
TGATCACGAAGACGGAGTGA+AGG 0.654079 7:-68933780 None:intergenic
GTCACAATTCAAGTCTGGAG+AGG 0.655467 7:+68935341 MsG0780039771.01.T01:CDS
GACATTGATGACACAGACAA+AGG 0.656327 7:-68935321 None:intergenic
GGGGCATCTTAACCCCAAGA+GGG 0.663762 7:+68936029 MsG0780039771.01.T01:CDS
AACGCTAGGACATAAAACAT+TGG 0.665080 7:-68937692 None:intergenic
AGGCCTTGAGAGTAATCGAG+AGG 0.695258 7:-68933816 None:intergenic
TGAGAAAGGGAGAGTCTGAG+GGG 0.709822 7:-68933660 None:intergenic
TCATGTAGAAGAGCATACAG+TGG 0.712488 7:-68936384 None:intergenic
TCAGGCATTGAATAACAACA+AGG 0.725364 7:+68937295 MsG0780039771.01.T01:CDS
GTGGTGAGAAGAAAAGATAG+TGG 0.725726 7:-68933573 None:intergenic
GTGAGAAGAAAAGATAGTGG+TGG 0.729472 7:-68933570 None:intergenic
GATAGCAACATTATTATGTG+AGG 0.734191 7:-68933540 None:intergenic
TTATGTACTTCTCTGCAGCG+AGG 0.740869 7:+68935282 MsG0780039771.01.T01:CDS
AAAGCGCGAAAAGAGTGACG+AGG 0.743732 7:-68933612 None:intergenic
AGGATGAAATTGGAGCAATG+TGG 0.804271 7:-68933592 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAAATATTACTAAATT+TGG + Chr7:68934476-68934495 MsG0780039771.01.T01:intron 10.0%
!! AAAGAAATATTACTAAATTT+GGG + Chr7:68934477-68934496 MsG0780039771.01.T01:intron 10.0%
!!! CTTGTTTTATTTTTAAATTA+TGG + Chr7:68935651-68935670 MsG0780039771.01.T01:intron 10.0%
!! ATAATTGAATATGTTTATCA+AGG + Chr7:68937385-68937404 MsG0780039771.01.T01:intron 15.0%
!! ATTTCAGCAAATATAATAAT+AGG - Chr7:68937797-68937816 None:intergenic 15.0%
!!! ACAAAATTTATATTTCTATG+AGG + Chr7:68934680-68934699 MsG0780039771.01.T01:intron 15.0%
!! AAAAAATTCTTACAGCATTT+AGG - Chr7:68936264-68936283 None:intergenic 20.0%
!! AATATGTTAACAGAATAACT+TGG - Chr7:68937424-68937443 None:intergenic 20.0%
!! AATCTTACAGCTATATAATT+GGG + Chr7:68934538-68934557 MsG0780039771.01.T01:intron 20.0%
!! ATACATGTCTTCATAATAAA+CGG - Chr7:68937485-68937504 None:intergenic 20.0%
!! TAATCTTACAGCTATATAAT+TGG + Chr7:68934537-68934556 MsG0780039771.01.T01:intron 20.0%
!! TGAATTTCAAATTTATACCA+AGG + Chr7:68934255-68934274 MsG0780039771.01.T01:intron 20.0%
! AAAAGAAATCTCTATGATTC+TGG - Chr7:68934846-68934865 None:intergenic 25.0%
! AAAGAAGTTCAAAAAACCAA+AGG - Chr7:68937724-68937743 None:intergenic 25.0%
! AAAGTTCTTGATCATTTGTT+GGG + Chr7:68937607-68937626 MsG0780039771.01.T01:CDS 25.0%
! AATTATTTAGCTGAACAAGA+AGG + Chr7:68935884-68935903 MsG0780039771.01.T01:CDS 25.0%
! ACTTGAAATTCTTATACTGT+TGG + Chr7:68936702-68936721 MsG0780039771.01.T01:intron 25.0%
! AGATAGTTGTAAAAAACACA+AGG - Chr7:68936134-68936153 None:intergenic 25.0%
! ATAGTTAACATTTCCTAACA+GGG - Chr7:68934386-68934405 None:intergenic 25.0%
! ATCCAAGGAAAATAATTGAA+TGG - Chr7:68933918-68933937 None:intergenic 25.0%
! ATGAAGTTATAAAGTCTGTT+TGG - Chr7:68937024-68937043 None:intergenic 25.0%
! ATTGAATTTCAAGGTTACAT+TGG - Chr7:68935617-68935636 None:intergenic 25.0%
! CCTTGCAAAAATAGTAAATA+TGG - Chr7:68935092-68935111 None:intergenic 25.0%
! CTTGAAATTCTTATACTGTT+GGG + Chr7:68936703-68936722 MsG0780039771.01.T01:intron 25.0%
! GTATCGAATATTTAGTTATC+TGG + Chr7:68933976-68933995 MsG0780039771.01.T01:intron 25.0%
! TAAGCAATCATTGAATTTCA+AGG - Chr7:68935626-68935645 None:intergenic 25.0%
! TCATATTATACTATGATCAC+AGG + Chr7:68937444-68937463 MsG0780039771.01.T01:intron 25.0%
! TCATTCAGAATCCAATAATT+TGG - Chr7:68934010-68934029 None:intergenic 25.0%
! TGGAATGTAATCCAAATTAT+TGG + Chr7:68933996-68934015 MsG0780039771.01.T01:intron 25.0%
! TGGATTCTCTTTACAATAAA+AGG - Chr7:68934081-68934100 None:intergenic 25.0%
! TGTTAGGAAATGTTAACTAT+GGG + Chr7:68934386-68934405 MsG0780039771.01.T01:intron 25.0%
! TTCTAAATATAATGTGAGTG+CGG - Chr7:68937330-68937349 None:intergenic 25.0%
! TTTAAATTATGGCAGAGTTA+CGG + Chr7:68935662-68935681 MsG0780039771.01.T01:intron 25.0%
! TTTGTTTGTGTGATAACTTT+AGG + Chr7:68935241-68935260 MsG0780039771.01.T01:intron 25.0%
!! AACCATTCAATTATTTTCCT+TGG + Chr7:68933913-68933932 MsG0780039771.01.T01:intron 25.0%
!! ATATTTGCTGAAATAATGTC+AGG + Chr7:68937803-68937822 MsG0780039771.01.T01:three_prime_UTR 25.0%
!! CCTTTTCTTTATGAAACTAT+GGG + Chr7:68934327-68934346 MsG0780039771.01.T01:intron 25.0%
!! GTATAAGAATTTCAAGTAGT+TGG - Chr7:68936699-68936718 None:intergenic 25.0%
!! TCCTTTTCTTTATGAAACTA+TGG + Chr7:68934326-68934345 MsG0780039771.01.T01:intron 25.0%
!! TTATATTTCTATGAGGAATG+TGG + Chr7:68934687-68934706 MsG0780039771.01.T01:intron 25.0%
!!! CCATATTTACTATTTTTGCA+AGG + Chr7:68935089-68935108 MsG0780039771.01.T01:intron 25.0%
!!! GTTTTTTTTCTTACCTTTCT+AGG + Chr7:68936176-68936195 MsG0780039771.01.T01:intron 25.0%
!!! TATTTACTATTTTTGCAAGG+TGG + Chr7:68935092-68935111 MsG0780039771.01.T01:intron 25.0%
AAACTGCATAGAACAAAAAC+TGG - Chr7:68936337-68936356 None:intergenic 30.0%
AACAATGGTGATCAAAATAG+AGG - Chr7:68937652-68937671 None:intergenic 30.0%
AAGTAGTGACTTATTCTCTT+AGG - Chr7:68936241-68936260 None:intergenic 30.0%
AATAAGGAATTGAGCAAACT+TGG - Chr7:68935969-68935988 None:intergenic 30.0%
ACCAACTATTGTGAAAGTTT+AGG + Chr7:68936465-68936484 MsG0780039771.01.T01:intron 30.0%
ATAGTCTTTAGCATTGCTTT+AGG + Chr7:68935525-68935544 MsG0780039771.01.T01:intron 30.0%
ATATGAGCTACATCTTTGAA+TGG - Chr7:68937236-68937255 None:intergenic 30.0%
ATGCCTGAATGTCATATAAT+TGG - Chr7:68937283-68937302 None:intergenic 30.0%
ATGGTATTACTGGTGAAATT+TGG + Chr7:68934632-68934651 MsG0780039771.01.T01:CDS 30.0%
CAAAGTTCTTGATCATTTGT+TGG + Chr7:68937606-68937625 MsG0780039771.01.T01:CDS 30.0%
CACTCTTTAAGCACTTTAAA+CGG + Chr7:68934445-68934464 MsG0780039771.01.T01:intron 30.0%
CATAGTTAACATTTCCTAAC+AGG - Chr7:68934387-68934406 None:intergenic 30.0%
CCCATAGTTTCATAAAGAAA+AGG - Chr7:68934330-68934349 None:intergenic 30.0%
CTGTTAGGAAATGTTAACTA+TGG + Chr7:68934385-68934404 MsG0780039771.01.T01:intron 30.0%
GAAACTATGGGACATATAAT+TGG + Chr7:68934339-68934358 MsG0780039771.01.T01:intron 30.0%
GATAGCAACATTATTATGTG+AGG - Chr7:68933543-68933562 None:intergenic 30.0%
GTTAGGAAATGTTAACTATG+GGG + Chr7:68934387-68934406 MsG0780039771.01.T01:intron 30.0%
TAAAGCAATGCTAAAGACTA+TGG - Chr7:68935526-68935545 None:intergenic 30.0%
TAACAGAATAACTTGGAGAT+TGG - Chr7:68937417-68937436 None:intergenic 30.0%
TAACTATGGGGCATATATAT+GGG + Chr7:68934399-68934418 MsG0780039771.01.T01:intron 30.0%
TACATCTTTGAATGGTTTCA+AGG - Chr7:68937228-68937247 None:intergenic 30.0%
TAGTCTTTAGCATTGCTTTA+GGG + Chr7:68935526-68935545 MsG0780039771.01.T01:intron 30.0%
TGCCTGAATGTCATATAATT+GGG - Chr7:68937282-68937301 None:intergenic 30.0%
TGTTGGAATATCCTATGTTT+CGG + Chr7:68934740-68934759 MsG0780039771.01.T01:intron 30.0%
TTAACTATGGGGCATATATA+TGG + Chr7:68934398-68934417 MsG0780039771.01.T01:intron 30.0%
TTCATGCAAATATGAATCCA+AGG - Chr7:68933933-68933952 None:intergenic 30.0%
! AAGTTTTACCTGACAATAGA+TGG - Chr7:68936412-68936431 None:intergenic 30.0%
! ATCACACGAAATTTTCTATG+TGG - Chr7:68934933-68934952 None:intergenic 30.0%
! CATTTGTTGGGAATGTTAAA+CGG + Chr7:68937619-68937638 MsG0780039771.01.T01:CDS 30.0%
! GAGAATCCAAATCATTTTAG+TGG + Chr7:68934092-68934111 MsG0780039771.01.T01:intron 30.0%
! TGCACTTAATTGTTTTCTCA+TGG + Chr7:68935477-68935496 MsG0780039771.01.T01:intron 30.0%
! TGTCAGGTAAAACTTCTTTT+CGG + Chr7:68936417-68936436 MsG0780039771.01.T01:intron 30.0%
! TTATACAGATGATTTTCCCA+TGG + Chr7:68937183-68937202 MsG0780039771.01.T01:intron 30.0%
! TTGAAGCATTAACAATGCTT+AGG + Chr7:68936567-68936586 MsG0780039771.01.T01:intron 30.0%
!! GAACAATTTTGATATCCTGA+GGG - Chr7:68935853-68935872 None:intergenic 30.0%
!! TGAACAATTTTGATATCCTG+AGG - Chr7:68935854-68935873 None:intergenic 30.0%
!!! TAATTTTTTAGACTGCCTGA+TGG + Chr7:68934959-68934978 MsG0780039771.01.T01:intron 30.0%
AAAAATGCCAACGTGACAAA+GGG - Chr7:68935018-68935037 None:intergenic 35.0%
AAACAGCTTCTCAAATAGCT+GGG + Chr7:68937527-68937546 MsG0780039771.01.T01:CDS 35.0%
AAATATAATGTGAGTGCGGA+GGG - Chr7:68937326-68937345 None:intergenic 35.0%
AACGCTAGGACATAAAACAT+TGG - Chr7:68937695-68937714 None:intergenic 35.0%
AACTTCAGTCCTTATTCTAC+TGG - Chr7:68936819-68936838 None:intergenic 35.0%
ACAGTTTCGACTCATCTTAA+TGG + Chr7:68935175-68935194 MsG0780039771.01.T01:intron 35.0%
ACATGAATCCATCTATTGTC+AGG + Chr7:68936401-68936420 MsG0780039771.01.T01:CDS 35.0%
ACCGTATGTCATATGAAACT+GGG - Chr7:68934660-68934679 None:intergenic 35.0%
ACTAATGAGTTCATGCATTC+TGG + Chr7:68937565-68937584 MsG0780039771.01.T01:CDS 35.0%
AGTCTTTAGCATTGCTTTAG+GGG + Chr7:68935527-68935546 MsG0780039771.01.T01:intron 35.0%
AGTTCAAAAAACCAAAGGCT+AGG - Chr7:68937719-68937738 None:intergenic 35.0%
ATAGAACAAAAACTGGAGGT+CGG - Chr7:68936330-68936349 None:intergenic 35.0%
CAAATTTATACCAAGGCCTA+AGG + Chr7:68934262-68934281 MsG0780039771.01.T01:intron 35.0%
CAACGTCCACTAAAATGATT+TGG - Chr7:68934101-68934120 None:intergenic 35.0%
CTAGGACATAAAACATTGGT+GGG - Chr7:68937691-68937710 None:intergenic 35.0%
CTATGCTATGCAAAGAGAAA+GGG - Chr7:68935993-68936012 None:intergenic 35.0%
GAATCTCATCAAACATCCAT+GGG - Chr7:68937202-68937221 None:intergenic 35.0%
GCAATTAAAGCTGCTAAAGA+AGG + Chr7:68936854-68936873 MsG0780039771.01.T01:CDS 35.0%
GCCTAAACTTTCACAATAGT+TGG - Chr7:68936469-68936488 None:intergenic 35.0%
GCTCTAGTGTTAACTAGAAA+TGG + Chr7:68934783-68934802 MsG0780039771.01.T01:intron 35.0%
GCTGATCATGCATTTAATGT+TGG + Chr7:68934723-68934742 MsG0780039771.01.T01:intron 35.0%
GTCCCAATTATATGACATTC+AGG + Chr7:68937277-68937296 MsG0780039771.01.T01:CDS 35.0%
GTTGGGTAACAACATATGAA+TGG + Chr7:68936720-68936739 MsG0780039771.01.T01:intron 35.0%
TAAATATAATGTGAGTGCGG+AGG - Chr7:68937327-68937346 None:intergenic 35.0%
TACCGTATGTCATATGAAAC+TGG - Chr7:68934661-68934680 None:intergenic 35.0%
TATTTAGCTGAACAAGAAGG+AGG + Chr7:68935887-68935906 MsG0780039771.01.T01:CDS 35.0%
TCAATGTCACAATTCAAGTC+TGG + Chr7:68935336-68935355 MsG0780039771.01.T01:CDS 35.0%
TCCCAGTTTCATATGACATA+CGG + Chr7:68934656-68934675 MsG0780039771.01.T01:CDS 35.0%
TGAATCTCATCAAACATCCA+TGG - Chr7:68937203-68937222 None:intergenic 35.0%
TGCAAAGAGAAAGGGAAATA+AGG - Chr7:68935985-68936004 None:intergenic 35.0%
TTCACACTTTATGACACCTT+AGG - Chr7:68934281-68934300 None:intergenic 35.0%
TTGCTGAAATAATGTCAGGT+TGG + Chr7:68937807-68937826 MsG0780039771.01.T01:three_prime_UTR 35.0%
TTGTGAAAGTTTAGGCTGAT+AGG + Chr7:68936473-68936492 MsG0780039771.01.T01:intron 35.0%
! ACCTCTCCTGTAAAAAGTAT+AGG - Chr7:68936884-68936903 None:intergenic 35.0%
! AGCCCAAGCAGTTAAAATTT+TGG - Chr7:68934219-68934238 None:intergenic 35.0%
! ATAATTGGGATGATTTGCCT+GGG + Chr7:68934552-68934571 MsG0780039771.01.T01:intron 35.0%
! CCAAGCAGTTAAAATTTTGG+CGG - Chr7:68934216-68934235 None:intergenic 35.0%
! GCAGAGAAGTACATAAGTAA+TGG - Chr7:68935278-68935297 None:intergenic 35.0%
! GTCATTGACATGAGTTTGTT+TGG + Chr7:68934590-68934609 MsG0780039771.01.T01:intron 35.0%
! TATAATTGGGATGATTTGCC+TGG + Chr7:68934551-68934570 MsG0780039771.01.T01:intron 35.0%
! TGACATGAGTTTGTTTGGAT+AGG + Chr7:68934595-68934614 MsG0780039771.01.T01:intron 35.0%
! TGTGAATTTTAAGCTGTCGA+AGG + Chr7:68937504-68937523 MsG0780039771.01.T01:CDS 35.0%
! TTAGTGGACGTTGGAAATTA+CGG + Chr7:68934108-68934127 MsG0780039771.01.T01:intron 35.0%
!! AAAGTGCTTAAAGAGTGTCT+GGG - Chr7:68934442-68934461 None:intergenic 35.0%
!! ACCTATACTTTTTACAGGAG+AGG + Chr7:68936880-68936899 MsG0780039771.01.T01:CDS 35.0%
!! ATGGCTTTAGATGGTATTAC+TGG + Chr7:68934622-68934641 MsG0780039771.01.T01:CDS 35.0%
!! ATTTGAGTTTTGCACCACAA+GGG + Chr7:68935705-68935724 MsG0780039771.01.T01:CDS 35.0%
!! CAAATCATTTTAGTGGACGT+TGG + Chr7:68934099-68934118 MsG0780039771.01.T01:intron 35.0%
!! GGACTACCTATACTTTTTAC+AGG + Chr7:68936875-68936894 MsG0780039771.01.T01:CDS 35.0%
!! GTTAAATTTTAGCGCAAGAC+AGG - Chr7:68936597-68936616 None:intergenic 35.0%
!! TAAAGTGCTTAAAGAGTGTC+TGG - Chr7:68934443-68934462 None:intergenic 35.0%
!! TATTTGAGTTTTGCACCACA+AGG + Chr7:68935704-68935723 MsG0780039771.01.T01:CDS 35.0%
!! TCAGGCATTGAATAACAACA+AGG + Chr7:68937295-68937314 MsG0780039771.01.T01:CDS 35.0%
!!! CGCCAAAATTTTAACTGCTT+GGG + Chr7:68934214-68934233 MsG0780039771.01.T01:intron 35.0%
!!! GTCTTTTGTTTTGTTGCAGT+TGG + Chr7:68935047-68935066 MsG0780039771.01.T01:intron 35.0%
AAAATGCCAACGTGACAAAG+GGG - Chr7:68935017-68935036 None:intergenic 40.0%
AAATTATGGCAGAGTTACGG+TGG + Chr7:68935665-68935684 MsG0780039771.01.T01:intron 40.0%
AAGAGTGACGAGGATGAAAT+TGG - Chr7:68933605-68933624 None:intergenic 40.0%
AAGCCCTCTTAGTTACATCA+GGG - Chr7:68936544-68936563 None:intergenic 40.0%
ACACTCTCTCAAACCTAGAA+AGG - Chr7:68936192-68936211 None:intergenic 40.0%
ACAGTCTTCGACTAAGATCA+CGG + Chr7:68933839-68933858 MsG0780039771.01.T01:CDS 40.0%
ACATAAAACATTGGTGGGAC+TGG - Chr7:68937686-68937705 None:intergenic 40.0%
AGATTATTCGAGTCCCTGTT+AGG + Chr7:68934370-68934389 MsG0780039771.01.T01:intron 40.0%
AGATTGAACTCTGGATCACT+TGG + Chr7:68936644-68936663 MsG0780039771.01.T01:intron 40.0%
AGGATGAAATTGGAGCAATG+TGG - Chr7:68933595-68933614 None:intergenic 40.0%
AGTGTCCATAAAAACATGCC+TGG - Chr7:68935202-68935221 None:intergenic 40.0%
ATCCATCCACTAGATTCAGT+TGG - Chr7:68935140-68935159 None:intergenic 40.0%
ATGTCCCTGATGTAACTAAG+AGG + Chr7:68936537-68936556 MsG0780039771.01.T01:intron 40.0%
CAAAAATGCCAACGTGACAA+AGG - Chr7:68935019-68935038 None:intergenic 40.0%
CATAAAACATTGGTGGGACT+GGG - Chr7:68937685-68937704 None:intergenic 40.0%
CCTATGCTATGCAAAGAGAA+AGG - Chr7:68935994-68936013 None:intergenic 40.0%
CCTTTCTCTTTGCATAGCAT+AGG + Chr7:68935991-68936010 MsG0780039771.01.T01:intron 40.0%
CTATGTGGCTGATCAAAAAC+TGG - Chr7:68934918-68934937 None:intergenic 40.0%
CTGCATAGAACAAAAACTGG+AGG - Chr7:68936334-68936353 None:intergenic 40.0%
CTTATTCTCTTAGGTGATCC+CGG - Chr7:68936232-68936251 None:intergenic 40.0%
GAAACAGCTTCTCAAATAGC+TGG + Chr7:68937526-68937545 MsG0780039771.01.T01:CDS 40.0%
GAGCATCAAAGATTGAACTC+TGG + Chr7:68936635-68936654 MsG0780039771.01.T01:intron 40.0%
GCTAGGACATAAAACATTGG+TGG - Chr7:68937692-68937711 None:intergenic 40.0%
GTACTACAAAAGATACCCTC+AGG + Chr7:68935835-68935854 MsG0780039771.01.T01:CDS 40.0%
GTGAGTTTGACAGAATCACA+TGG + Chr7:68934130-68934149 MsG0780039771.01.T01:intron 40.0%
GTGGTGAGAAGAAAAGATAG+TGG - Chr7:68933576-68933595 None:intergenic 40.0%
TCATATACTGTCCGAGAAGA+AGG + Chr7:68937250-68937269 MsG0780039771.01.T01:CDS 40.0%
TCATGACAAATGCATACACG+AGG - Chr7:68936445-68936464 None:intergenic 40.0%
TCTCTATGATTCTGGACTTG+AGG - Chr7:68934838-68934857 None:intergenic 40.0%
TGAATCTGTGATCACGAAGA+CGG - Chr7:68933791-68933810 None:intergenic 40.0%
TGATCTTAGTCGAAGACTGT+AGG - Chr7:68933839-68933858 None:intergenic 40.0%
TGCAATTGCAGAGACATGAA+AGG - Chr7:68937072-68937091 None:intergenic 40.0%
TGTCCCTGATGTAACTAAGA+GGG + Chr7:68936538-68936557 MsG0780039771.01.T01:intron 40.0%
TTCTCTTTGCATAGCATAGG+TGG + Chr7:68935994-68936013 MsG0780039771.01.T01:intron 40.0%
TTTCTAGGTTTGAGAGAGTG+TGG + Chr7:68936191-68936210 MsG0780039771.01.T01:intron 40.0%
! AATATCCTATGTTTCGGTGC+TGG + Chr7:68934746-68934765 MsG0780039771.01.T01:intron 40.0%
! CAAGTAGTTGGTTCATGACA+TGG - Chr7:68936687-68936706 None:intergenic 40.0%
! GACATTGATGACACAGACAA+AGG - Chr7:68935324-68935343 None:intergenic 40.0%
! GTGAGAAGAAAAGATAGTGG+TGG - Chr7:68933573-68933592 None:intergenic 40.0%
! TCATGTAGAAGAGCATACAG+TGG - Chr7:68936387-68936406 None:intergenic 40.0%
! TTCTAGGTTTGAGAGAGTGT+GGG + Chr7:68936192-68936211 MsG0780039771.01.T01:intron 40.0%
!! AAAGCTGCACTTTAGAGCTT+CGG - Chr7:68934172-68934191 None:intergenic 40.0%
!! AAGTGCTTAAAGAGTGTCTG+GGG - Chr7:68934441-68934460 None:intergenic 40.0%
!! ATGGACCAGGCATGTTTTTA+TGG + Chr7:68935194-68935213 MsG0780039771.01.T01:intron 40.0%
!! CTTGGGCTTTTTGTTACTTG+AGG + Chr7:68934231-68934250 MsG0780039771.01.T01:intron 40.0%
!! TATTTTTGCAAGGTGGTCCT+GGG + Chr7:68935099-68935118 MsG0780039771.01.T01:intron 40.0%
!! TTTCTTGATTTGTGAGCACG+TGG + Chr7:68935558-68935577 MsG0780039771.01.T01:intron 40.0%
!!! CCGCCAAAATTTTAACTGCT+TGG + Chr7:68934213-68934232 MsG0780039771.01.T01:intron 40.0%
!!! TGAGGGGTTTTGAGAAAAGA+GGG - Chr7:68933647-68933666 None:intergenic 40.0%
AAATAGCTGGGATCAGGCTA+TGG + Chr7:68937539-68937558 MsG0780039771.01.T01:CDS 45.0%
AAATGCCAACGTGACAAAGG+GGG - Chr7:68935016-68935035 None:intergenic 45.0%
AGCTCACGCATTCCAATGAA+CGG + Chr7:68933687-68933706 MsG0780039771.01.T01:CDS 45.0%
ATTGTCCAAGGTCCAGCATT+TGG - Chr7:68935444-68935463 None:intergenic 45.0%
CAAGCCCTCTTAGTTACATC+AGG - Chr7:68936545-68936564 None:intergenic 45.0%
CACCAACTGAATCTAGTGGA+TGG + Chr7:68935135-68935154 MsG0780039771.01.T01:intron 45.0%
CATCCACTAGATTCAGTTGG+TGG - Chr7:68935137-68935156 None:intergenic 45.0%
CATGTCTCTGCAATTGCAGT+CGG + Chr7:68937074-68937093 MsG0780039771.01.T01:intron 45.0%
CTGGGAGAGAAGAGTAACAA+TGG - Chr7:68937667-68937686 None:intergenic 45.0%
CTTCTCAAATAGCTGGGATC+AGG + Chr7:68937533-68937552 MsG0780039771.01.T01:CDS 45.0%
CTTTATGACACCTTAGGCCT+TGG - Chr7:68934275-68934294 None:intergenic 45.0%
GATGGTCTGCCAGTAGAATA+AGG + Chr7:68936807-68936826 MsG0780039771.01.T01:CDS 45.0%
GGAATTCCTCCAATAGGACA+TGG + Chr7:68935752-68935771 MsG0780039771.01.T01:CDS 45.0%
GTCACAATTCAAGTCTGGAG+AGG + Chr7:68935341-68935360 MsG0780039771.01.T01:CDS 45.0%
GTTTGTTTGGATAGGCGACA+TGG + Chr7:68934603-68934622 MsG0780039771.01.T01:intron 45.0%
TAATAAACGGCAGCTGCAAC+AGG - Chr7:68937472-68937491 None:intergenic 45.0%
TACTGTCCGAGAAGAAGGAT+TGG + Chr7:68937255-68937274 MsG0780039771.01.T01:CDS 45.0%
TAGCTGAACAAGAAGGAGGA+GGG + Chr7:68935891-68935910 MsG0780039771.01.T01:CDS 45.0%
TCATTGGAATGCGTGAGCTT+CGG - Chr7:68933686-68933705 None:intergenic 45.0%
TCCTATTGGAGGAATTCCAC+CGG - Chr7:68935750-68935769 None:intergenic 45.0%
TTAGCTGAACAAGAAGGAGG+AGG + Chr7:68935890-68935909 MsG0780039771.01.T01:CDS 45.0%
TTATGTACTTCTCTGCAGCG+AGG + Chr7:68935282-68935301 MsG0780039771.01.T01:CDS 45.0%
TTGGGACCAATCCTTCTTCT+CGG - Chr7:68937264-68937283 None:intergenic 45.0%
TTGTTCCAAATGCTGGACCT+TGG + Chr7:68935436-68935455 MsG0780039771.01.T01:CDS 45.0%
! AAGGTCCAGCATTTGGAACA+AGG - Chr7:68935437-68935456 None:intergenic 45.0%
! CTGGACCTTGGACAATTTTG+GGG + Chr7:68935448-68935467 MsG0780039771.01.T01:CDS 45.0%
! CTTTTGTCAAAACCCTGGTG+CGG + Chr7:68934188-68934207 MsG0780039771.01.T01:intron 45.0%
! GCTGGACCTTGGACAATTTT+GGG + Chr7:68935447-68935466 MsG0780039771.01.T01:CDS 45.0%
! GTGGGATCCTACTTTAGTTC+CGG + Chr7:68936210-68936229 MsG0780039771.01.T01:CDS 45.0%
! TCGACTCATCTTAATGGACC+AGG + Chr7:68935181-68935200 MsG0780039771.01.T01:intron 45.0%
! TGCAGCTTTTGTCAAAACCC+TGG + Chr7:68934183-68934202 MsG0780039771.01.T01:intron 45.0%
! TGCTGGACCTTGGACAATTT+TGG + Chr7:68935446-68935465 MsG0780039771.01.T01:CDS 45.0%
! TGGGATCCTACTTTAGTTCC+GGG + Chr7:68936211-68936230 MsG0780039771.01.T01:CDS 45.0%
!! ACTGGAGGTCGGTTTTCAAA+AGG - Chr7:68936319-68936338 None:intergenic 45.0%
!! AGTGCTTAAAGAGTGTCTGG+GGG - Chr7:68934440-68934459 None:intergenic 45.0%
!! ATAGGCGACATGGCTTTAGA+TGG + Chr7:68934613-68934632 MsG0780039771.01.T01:intron 45.0%
!! CAAGGTTACATTGGCTTCGA+GGG - Chr7:68935608-68935627 None:intergenic 45.0%
!! CACTAGATTCAGTTGGTGGT+CGG - Chr7:68935133-68935152 None:intergenic 45.0%
!! TCAAGGTTACATTGGCTTCG+AGG - Chr7:68935609-68935628 None:intergenic 45.0%
!!! CTATTTTTGCAAGGTGGTCC+TGG + Chr7:68935098-68935117 MsG0780039771.01.T01:intron 45.0%
!!! CTGAGGGGTTTTGAGAAAAG+AGG - Chr7:68933648-68933667 None:intergenic 45.0%
AAAGCGCGAAAAGAGTGACG+AGG - Chr7:68933615-68933634 None:intergenic 50.0%
AATGCCAACGTGACAAAGGG+GGG - Chr7:68935015-68935034 None:intergenic 50.0%
ACCGGTGGAATTCCTCCAAT+AGG + Chr7:68935746-68935765 MsG0780039771.01.T01:CDS 50.0%
ACCTGCCCCAAAATTGTCCA+AGG - Chr7:68935456-68935475 None:intergenic 50.0%
ACGAAGACGGAGTGAAGGTA+CGG - Chr7:68933778-68933797 None:intergenic 50.0%
AGCACAAGTGCTCATCCATC+AGG - Chr7:68934977-68934996 None:intergenic 50.0%
AGCTGAACAAGAAGGAGGAG+GGG + Chr7:68935892-68935911 MsG0780039771.01.T01:CDS 50.0%
AGGAATTCCACCGGTCAGAA+GGG - Chr7:68935741-68935760 None:intergenic 50.0%
AGGCCTTGAGAGTAATCGAG+AGG - Chr7:68933819-68933838 None:intergenic 50.0%
AGGTACGGAGAACCAATCTC+CGG - Chr7:68933763-68933782 None:intergenic 50.0%
ATTTGCCTGGGATGAGGACA+TGG + Chr7:68934564-68934583 MsG0780039771.01.T01:intron 50.0%
CGACCACCAACTGAATCTAG+TGG + Chr7:68935131-68935150 MsG0780039771.01.T01:intron 50.0%
GAGCTTCGGCAAAATCACCT+TGG - Chr7:68934158-68934177 None:intergenic 50.0%
GCAGTGCATCCATGTCCTAT+TGG - Chr7:68935764-68935783 None:intergenic 50.0%
GCGATGGTAAGTCCGTTCAT+TGG - Chr7:68933702-68933721 None:intergenic 50.0%
GGCCTTGAGAGTAATCGAGA+GGG - Chr7:68933818-68933837 None:intergenic 50.0%
GGTGATCCCGGAACTAAAGT+AGG - Chr7:68936220-68936239 None:intergenic 50.0%
GTCCCTCTCGATTACTCTCA+AGG + Chr7:68933813-68933832 MsG0780039771.01.T01:CDS 50.0%
GTGAGAAAGGGAGAGTCTGA+GGG - Chr7:68933664-68933683 None:intergenic 50.0%
GTGCATCCATGTCCTATTGG+AGG - Chr7:68935761-68935780 None:intergenic 50.0%
TAAGATGCCCCCAGAAGGAA+GGG - Chr7:68936020-68936039 None:intergenic 50.0%
TATATATACGAGTGCCCCCG+AGG - Chr7:68934517-68934536 None:intergenic 50.0%
TGAGAAAGGGAGAGTCTGAG+GGG - Chr7:68933663-68933682 None:intergenic 50.0%
TGATCACGAAGACGGAGTGA+AGG - Chr7:68933783-68933802 None:intergenic 50.0%
TGCAGGGTTCTGCTAGTAGA+TGG + Chr7:68936789-68936808 MsG0780039771.01.T01:intron 50.0%
TGTTCTCCCTTGACACTGCA+GGG + Chr7:68936773-68936792 MsG0780039771.01.T01:intron 50.0%
TTAAGATGCCCCCAGAAGGA+AGG - Chr7:68936021-68936040 None:intergenic 50.0%
TTCGCTCGTGAAGTTGTTGC+AGG + Chr7:68933864-68933883 MsG0780039771.01.T01:CDS 50.0%
TTGGCTCAGCTTCGCATATG+TGG - Chr7:68937005-68937024 None:intergenic 50.0%
TTGTTCTCCCTTGACACTGC+AGG + Chr7:68936772-68936791 MsG0780039771.01.T01:intron 50.0%
! ACTCTTGGTCTCTCTGGCTT+AGG + Chr7:68936058-68936077 MsG0780039771.01.T01:CDS 50.0%
! CAATTGCAGTCGGCTTATGC+AGG + Chr7:68937084-68937103 MsG0780039771.01.T01:intron 50.0%
! GACAGAATCACATGGTGCCA+AGG + Chr7:68934138-68934157 MsG0780039771.01.T01:intron 50.0%
! GTTCGCCTTGTTCCAAATGC+TGG + Chr7:68935429-68935448 MsG0780039771.01.T01:CDS 50.0%
! GTTTGCCAGCACCGAAACAT+AGG - Chr7:68934754-68934773 None:intergenic 50.0%
!! ATCCTTAAAGAGTGCCTCGG+GGG + Chr7:68934500-68934519 MsG0780039771.01.T01:intron 50.0%
!! ATTCTGGCTTGCGTGATGAC+GGG + Chr7:68937581-68937600 MsG0780039771.01.T01:CDS 50.0%
!! CATTCTGGCTTGCGTGATGA+CGG + Chr7:68937580-68937599 MsG0780039771.01.T01:CDS 50.0%
!! GATCCTTAAAGAGTGCCTCG+GGG + Chr7:68934499-68934518 MsG0780039771.01.T01:intron 50.0%
!! GGATCCTTAAAGAGTGCCTC+GGG + Chr7:68934498-68934517 MsG0780039771.01.T01:intron 50.0%
!! GGGATCCTTAAAGAGTGCCT+CGG + Chr7:68934497-68934516 MsG0780039771.01.T01:intron 50.0%
!!! ACCTTGGACAATTTTGGGGC+AGG + Chr7:68935452-68935471 MsG0780039771.01.T01:CDS 50.0%
AAGAGTCTGCAGCCCTCTTG+GGG - Chr7:68936044-68936063 None:intergenic 55.0%
ACCAAAGGCTAGGCAACGCT+AGG - Chr7:68937709-68937728 None:intergenic 55.0%
ACTTCTCTGCAGCGAGGAAC+AGG + Chr7:68935288-68935307 MsG0780039771.01.T01:CDS 55.0%
AGCAGAACCCTGCAGTGTCA+AGG - Chr7:68936783-68936802 None:intergenic 55.0%
ATAGGTGGCCCTTCCTTCTG+GGG + Chr7:68936009-68936028 MsG0780039771.01.T01:intron 55.0%
ATCACCCCCCTTTGTCACGT+TGG + Chr7:68935008-68935027 MsG0780039771.01.T01:intron 55.0%
CAAGAGTCTGCAGCCCTCTT+GGG - Chr7:68936045-68936064 None:intergenic 55.0%
CAATCTCCGGTGACATGCTC+CGG - Chr7:68933750-68933769 None:intergenic 55.0%
CATAGGTGGCCCTTCCTTCT+GGG + Chr7:68936008-68936027 MsG0780039771.01.T01:intron 55.0%
CTGCAGACTCTTGGTCTCTC+TGG + Chr7:68936052-68936071 MsG0780039771.01.T01:CDS 55.0%
GAGGAATTCCACCGGTCAGA+AGG - Chr7:68935742-68935761 None:intergenic 55.0%
GCAGAACCCTGCAGTGTCAA+GGG - Chr7:68936782-68936801 None:intergenic 55.0%
GCGTGAGCTTCGGTGAGAAA+GGG - Chr7:68933676-68933695 None:intergenic 55.0%
GGTGAGAAAGGGAGAGTCTG+AGG - Chr7:68933665-68933684 None:intergenic 55.0%
TCTGGATCACTTGGTCGCAG+AGG + Chr7:68936653-68936672 MsG0780039771.01.T01:intron 55.0%
TGCGTGAGCTTCGGTGAGAA+AGG - Chr7:68933677-68933696 None:intergenic 55.0%
! GGGATGATTTGCCTGGGATG+AGG + Chr7:68934558-68934577 MsG0780039771.01.T01:intron 55.0%
! GGGGCATCTTAACCCCAAGA+GGG + Chr7:68936029-68936048 MsG0780039771.01.T01:CDS 55.0%
! GGTCTCTCTGGCTTAGGATC+TGG + Chr7:68936064-68936083 MsG0780039771.01.T01:CDS 55.0%
! TCCTAGCGTTGCCTAGCCTT+TGG + Chr7:68937705-68937724 MsG0780039771.01.T01:three_prime_UTR 55.0%
! TCTGGCTTAGGATCTGGAGC+TGG + Chr7:68936070-68936089 MsG0780039771.01.T01:CDS 55.0%
!! AATTTTGGCGGAACCGCACC+AGG - Chr7:68934204-68934223 None:intergenic 55.0%
!! ATTTTGGCGGAACCGCACCA+GGG - Chr7:68934203-68934222 None:intergenic 55.0%
!! TTCTGGCTTGCGTGATGACG+GGG + Chr7:68937582-68937601 MsG0780039771.01.T01:CDS 55.0%
ACCTGCCATGTCCTCATCCC+AGG - Chr7:68934572-68934591 None:intergenic 60.0%
CCAAGAGGGCTGCAGACTCT+TGG + Chr7:68936043-68936062 MsG0780039771.01.T01:CDS 60.0%
CCAAGAGTCTGCAGCCCTCT+TGG - Chr7:68936046-68936065 None:intergenic 60.0%
CGGAGCATGTCACCGGAGAT+TGG + Chr7:68933748-68933767 MsG0780039771.01.T01:CDS 60.0%
CTGACGCAAGCCCTTCTGAC+CGG + Chr7:68935728-68935747 MsG0780039771.01.T01:CDS 60.0%
GCATAGGTGGCCCTTCCTTC+TGG + Chr7:68936007-68936026 MsG0780039771.01.T01:intron 60.0%
GGGGTTAAGATGCCCCCAGA+AGG - Chr7:68936025-68936044 None:intergenic 60.0%
TAGGTGGCCCTTCCTTCTGG+GGG + Chr7:68936010-68936029 MsG0780039771.01.T01:intron 60.0%
! TGCCCCCGAGGCACTCTTTA+AGG - Chr7:68934505-68934524 None:intergenic 60.0%
!! GGGGGCATCTTAACCCCAAG+AGG + Chr7:68936028-68936047 MsG0780039771.01.T01:CDS 60.0%
!! TCTGGCTTGCGTGATGACGG+GGG + Chr7:68937583-68937602 MsG0780039771.01.T01:CDS 60.0%
ACGCAAGCCCTTCTGACCGG+TGG + Chr7:68935731-68935750 MsG0780039771.01.T01:CDS 65.0%
AGGGCTTGCGTCAGCCCTTG+TGG - Chr7:68935722-68935741 None:intergenic 65.0%
CGAGGAGGTGGAGGAGGAGA+CGG - Chr7:68933727-68933746 None:intergenic 65.0%
GCCTGGGATGAGGACATGGC+AGG + Chr7:68934568-68934587 MsG0780039771.01.T01:intron 65.0%
GGTGGTCGGCACTCAAACCC+AGG - Chr7:68935119-68935138 None:intergenic 65.0%
TCCTCGCCGGAGCATGTCAC+CGG + Chr7:68933741-68933760 MsG0780039771.01.T01:CDS 65.0%
ATGCTCCGGCGAGGAGGTGG+AGG - Chr7:68933736-68933755 None:intergenic 70.0%
CTCCTCCTCCACCTCCTCGC+CGG + Chr7:68933728-68933747 MsG0780039771.01.T01:CDS 70.0%
GACATGCTCCGGCGAGGAGG+TGG - Chr7:68933739-68933758 None:intergenic 70.0%
GGAGGAGGAGACGGTGGCGA+TGG - Chr7:68933718-68933737 None:intergenic 70.0%
GGAGGTGGAGGAGGAGACGG+TGG - Chr7:68933724-68933743 None:intergenic 70.0%
GGTGACATGCTCCGGCGAGG+AGG - Chr7:68933742-68933761 None:intergenic 70.0%
TCCGGTGACATGCTCCGGCG+AGG - Chr7:68933745-68933764 None:intergenic 70.0%
CTCCGGCGAGGAGGTGGAGG+AGG - Chr7:68933733-68933752 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 68933539 68937837 68933539 ID=MsG0780039771.01;Name=MsG0780039771.01
Chr7 mRNA 68933539 68937837 68933539 ID=MsG0780039771.01.T01;Parent=MsG0780039771.01;Name=MsG0780039771.01.T01;_AED=0.43;_eAED=0.45;_QI=13|0.77|0.8|1|1|1|10|177|504
Chr7 exon 68933539 68933885 68933539 ID=MsG0780039771.01.T01:exon:12245;Parent=MsG0780039771.01.T01
Chr7 exon 68934617 68934677 68934617 ID=MsG0780039771.01.T01:exon:12246;Parent=MsG0780039771.01.T01
Chr7 exon 68935263 68935473 68935263 ID=MsG0780039771.01.T01:exon:12247;Parent=MsG0780039771.01.T01
Chr7 exon 68935677 68935913 68935677 ID=MsG0780039771.01.T01:exon:12248;Parent=MsG0780039771.01.T01
Chr7 exon 68936013 68936113 68936013 ID=MsG0780039771.01.T01:exon:12249;Parent=MsG0780039771.01.T01
Chr7 exon 68936198 68936270 68936198 ID=MsG0780039771.01.T01:exon:12250;Parent=MsG0780039771.01.T01
Chr7 exon 68936354 68936422 68936354 ID=MsG0780039771.01.T01:exon:12251;Parent=MsG0780039771.01.T01
Chr7 exon 68936794 68936901 68936794 ID=MsG0780039771.01.T01:exon:12252;Parent=MsG0780039771.01.T01
Chr7 exon 68937191 68937316 68937191 ID=MsG0780039771.01.T01:exon:12253;Parent=MsG0780039771.01.T01
Chr7 exon 68937466 68937837 68937466 ID=MsG0780039771.01.T01:exon:12254;Parent=MsG0780039771.01.T01
Chr7 five_prime_UTR 68933539 68933551 68933539 ID=MsG0780039771.01.T01:five_prime_utr;Parent=MsG0780039771.01.T01
Chr7 CDS 68933552 68933885 68933552 ID=MsG0780039771.01.T01:cds;Parent=MsG0780039771.01.T01
Chr7 CDS 68934617 68934677 68934617 ID=MsG0780039771.01.T01:cds;Parent=MsG0780039771.01.T01
Chr7 CDS 68935263 68935473 68935263 ID=MsG0780039771.01.T01:cds;Parent=MsG0780039771.01.T01
Chr7 CDS 68935677 68935913 68935677 ID=MsG0780039771.01.T01:cds;Parent=MsG0780039771.01.T01
Chr7 CDS 68936013 68936113 68936013 ID=MsG0780039771.01.T01:cds;Parent=MsG0780039771.01.T01
Chr7 CDS 68936198 68936270 68936198 ID=MsG0780039771.01.T01:cds;Parent=MsG0780039771.01.T01
Chr7 CDS 68936354 68936422 68936354 ID=MsG0780039771.01.T01:cds;Parent=MsG0780039771.01.T01
Chr7 CDS 68936794 68936901 68936794 ID=MsG0780039771.01.T01:cds;Parent=MsG0780039771.01.T01
Chr7 CDS 68937191 68937316 68937191 ID=MsG0780039771.01.T01:cds;Parent=MsG0780039771.01.T01
Chr7 CDS 68937466 68937660 68937466 ID=MsG0780039771.01.T01:cds;Parent=MsG0780039771.01.T01
Chr7 three_prime_UTR 68937661 68937837 68937661 ID=MsG0780039771.01.T01:three_prime_utr;Parent=MsG0780039771.01.T01
Gene Sequence

>MsG0780039771.01.T01

ATGTTGCTATCACACGCGCCACCACTATCTTTTCTTCTCACCACATTGCTCCAATTTCATCCTCGTCACTCTTTTCGCGCTTTATCATCAATCCCTCTTTTCTCAAAACCCCTCAGACTCTCCCTTTCTCACCGAAGCTCACGCATTCCAATGAACGGACTTACCATCGCCACCGTCTCCTCCTCCACCTCCTCGCCGGAGCATGTCACCGGAGATTGGTTCTCCGTACCTTCACTCCGTCTTCGTGATCACAGATTCACTGTCCCTCTCGATTACTCTCAAGGCCTACAGTCTTCGACTAAGATCACGGTTTTCGCTCGTGAAGTTGTTGCAGGCGACATGGCTTTAGATGGTATTACTGGTGAAATTTGGTTCCCAGTTTCATATGACATACGGAAAGATCTGTTCCATTACTTATGTACTTCTCTGCAGCGAGGAACAGGCTTATCAACTCCTTTGTCTGTGTCATCAATGTCACAATTCAAGTCTGGAGAGGACTTAGCTGACTTCTTAAAATATTTTCGAGCTGATAGTATAGTAAATGATGCAGAGTTTATTCGAGTTCGCCTTGTTCCAAATGCTGGACCTTGGACAATTTTGGGGCAGAGTTACGGTGGATTTTGCGCAGTCACATATTTGAGTTTTGCACCACAAGGGCTGACGCAAGCCCTTCTGACCGGTGGAATTCCTCCAATAGGACATGGATGCACTGCAGATTCAGTATACAGAGCATGCTTTGAGCAAATTATGCATCAAAATGAGAAGTACTACAAAAGATACCCTCAGGATATCAAAATTGTTCAAGAACTTGTTAATTATTTAGCTGAACAAGAAGGAGGAGGGGTGGCCCTTCCTTCTGGGGGCATCTTAACCCCAAGAGGGCTGCAGACTCTTGGTCTCTCTGGCTTAGGATCTGGAGCTGGTTTCGAGAGCATGCACTATATGTTTGAGAGAGTGTGGGATCCTACTTTAGTTCCGGGATCACCTAAGAGAATAAGTCACTACTTCCTAAATGCTTTTGAAAGCTCGATATCTGTTGATACTAATCCACTGTATGCTCTTCTACATGAATCCATCTATTGTCAGGGTTCTGCTAGTAGATGGTCTGCCAGTAGAATAAGGACTGAAGTTGAAGACAAATTTGATGCAATTAAAGCTGCTAAAGAAGGACTACCTATACTTTTTACAGGAGAGATGATTTTCCCATGGATGTTTGATGAGATTCATGCCTTGAAACCATTCAAAGATGTAGCTCATATACTGTCCGAGAAGAAGGATTGGTCCCAATTATATGACATTCAGGCATTGAATAACAACAAGGTACCTGTTGCAGCTGCCGTTTATTATGAAGACATGTATGTGAATTTTAAGCTGTCGAAGGAAACAGCTTCTCAAATAGCTGGGATCAGGCTATGGATAACTAATGAGTTCATGCATTCTGGCTTGCGTGATGACGGGGGCAAAGTTCTTGATCATTTGTTGGGAATGTTAAACGGAAAGAAACCTCTATTTTGA
Protein sequence

>MsG0780039771.01.T01

MLLSHAPPLSFLLTTLLQFHPRHSFRALSSIPLFSKPLRLSLSHRSSRIPMNGLTIATVSSSTSSPEHVTGDWFSVPSLRLRDHRFTVPLDYSQGLQSSTKITVFAREVVAGDMALDGITGEIWFPVSYDIRKDLFHYLCTSLQRGTGLSTPLSVSSMSQFKSGEDLADFLKYFRADSIVNDAEFIRVRLVPNAGPWTILGQSYGGFCAVTYLSFAPQGLTQALLTGGIPPIGHGCTADSVYRACFEQIMHQNEKYYKRYPQDIKIVQELVNYLAEQEGGGVALPSGGILTPRGLQTLGLSGLGSGAGFESMHYMFERVWDPTLVPGSPKRISHYFLNAFESSISVDTNPLYALLHESIYCQGSASRWSASRIRTEVEDKFDAIKAAKEGLPILFTGEMIFPWMFDEIHALKPFKDVAHILSEKKDWSQLYDIQALNNNKVPVAAAVYYEDMYVNFKLSKETASQIAGIRLWITNEFMHSGLRDDGGKVLDHLLGMLNGKKPLF*