AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046331.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046331.01.T01 MTR_4g106870 98.737 475 6 0 1 475 1 475 0.0 964
MsG0880046331.01.T01 MTR_8g012565 74.098 471 118 3 1 469 1 469 0.0 726
MsG0880046331.01.T01 MTR_8g012565 73.087 379 98 3 1 377 1 377 0.0 572
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046331.01.T01 AT5G62790 82.390 477 81 2 1 475 2 477 0.0 789
MsG0880046331.01.T01 AT5G62790 78.715 498 82 3 1 475 1 497 0.0 778

Find 129 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGAAGCACATTACTTATT+TGG 0.150895 8:-72093964 MsG0880046331.01.T01:CDS
CAAGTCTTGTTACCTAGTTC+TGG 0.168286 8:+72096870 None:intergenic
AAGAAAGAACCTGGGAATTT+AGG 0.189751 8:+72097115 None:intergenic
TGTTTCCAGGATTAGCTATT+TGG 0.208608 8:-72092753 MsG0880046331.01.T01:intron
GGCAATTAGTGTCTCTTTAT+TGG 0.216981 8:+72095106 None:intergenic
TTCAATGGCCAAAGAAATTA+AGG 0.227966 8:+72092496 None:intergenic
ATAAGAACACTGCACTTTCT+TGG 0.249835 8:-72097260 MsG0880046331.01.T01:five_prime_UTR
AAAACATCCCAACTGGAGTA+TGG 0.276203 8:-72094121 MsG0880046331.01.T01:CDS
CCAACAATAGAGATGGGTTT+AGG 0.286621 8:+72096840 None:intergenic
TTCATCTGTTCTTGCACAAT+TGG 0.303753 8:-72093770 MsG0880046331.01.T01:CDS
TCATCTGTTCTTGCACAATT+GGG 0.311960 8:-72093769 MsG0880046331.01.T01:CDS
GCTTTGAAAAGAAAAGAAAA+TGG 0.329522 8:-72096972 MsG0880046331.01.T01:CDS
GCCTATGCTGCTGGCCGCGC+TGG 0.330237 8:-72093457 MsG0880046331.01.T01:CDS
GCGACAACTCTAAACTTATC+TGG 0.348351 8:+72096585 None:intergenic
ATCACTGATTTAAGAAGAAT+TGG 0.353707 8:-72092570 MsG0880046331.01.T01:three_prime_UTR
AAGTCTTGTTACCTAGTTCT+GGG 0.362313 8:+72096871 None:intergenic
CAACAATAGAGATGGGTTTA+GGG 0.365991 8:+72096841 None:intergenic
GATGTGGTGGTGACAGAAAA+TGG 0.372835 8:+72097290 None:intergenic
AGGATTGGCAAACGCATATC+AGG 0.374634 8:+72093742 None:intergenic
ATCTCTATTGTTGGATGCAC+TGG 0.375194 8:-72096831 MsG0880046331.01.T01:CDS
TTCTTCGCTTCAGTGTATCC+AGG 0.416692 8:-72094536 MsG0880046331.01.T01:intron
GTTGGATGCACTGGTTCAAT+TGG 0.420513 8:-72096822 MsG0880046331.01.T01:CDS
GCAAACTAGCAGCATATTCT+CGG 0.421203 8:+72092633 None:intergenic
ACATCTTTCAGTTTCTCAAC+AGG 0.421238 8:+72094162 None:intergenic
CAGGCCATGATAATGTATAA+AGG 0.421244 8:+72093722 None:intergenic
GATGGATACTTAATGTTGTC+AGG 0.430692 8:+72093490 None:intergenic
TCAATGACGCCTTGTTCTCC+CGG 0.434922 8:+72096135 None:intergenic
CAATCCTTTATACATTATCA+TGG 0.441678 8:-72093726 MsG0880046331.01.T01:CDS
TCCAGCGCGGCCAGCAGCAT+AGG 0.445154 8:+72093456 None:intergenic
GTGACAACAGTGACTGCATC+CGG 0.450389 8:+72096014 None:intergenic
GATCAGTCTCATGCTAGAAC+AGG 0.456977 8:+72092590 None:intergenic
TGTTCTCCCGGGATGATCTC+CGG 0.457319 8:+72096147 None:intergenic
CGCGCTGGAGGAACCATGAC+AGG 0.460029 8:-72093442 MsG0880046331.01.T01:CDS
CAGAACTAGGTAACAAGACT+TGG 0.462516 8:-72096869 MsG0880046331.01.T01:CDS
ACAGTTGCGGCCATAGAAGC+TGG 0.466883 8:-72095146 MsG0880046331.01.T01:CDS
ATTGCTCGTCCTGGCCATGC+TGG 0.468681 8:+72096894 None:intergenic
CATTGTATACAATTGTTCAA+TGG 0.468951 8:+72092481 None:intergenic
TATGCTGCTGGCCGCGCTGG+AGG 0.470238 8:-72093454 MsG0880046331.01.T01:CDS
CACTAGCAGCTGGTAGGAAT+CGG 0.471313 8:+72092532 None:intergenic
ATGCATTAAAACATCCCAAC+TGG 0.473839 8:-72094128 MsG0880046331.01.T01:CDS
AGAGTTGTCGCACTTGCAGC+TGG 0.474198 8:-72096573 MsG0880046331.01.T01:CDS
AAACATCCCAACTGGAGTAT+GGG 0.476050 8:-72094120 MsG0880046331.01.T01:CDS
CCTAAACCCATCTCTATTGT+TGG 0.480547 8:-72096840 MsG0880046331.01.T01:CDS
CATGATAATGTATAAAGGAT+TGG 0.483281 8:+72093727 None:intergenic
ATGAATCTTGCCTATGCTGC+TGG 0.484349 8:-72093466 MsG0880046331.01.T01:CDS
TCTCCAGCTGAACTTAAGTC+CGG 0.486037 8:-72097175 MsG0880046331.01.T01:CDS
GCTTCTATGGCCGCAACTGT+TGG 0.486636 8:+72095149 None:intergenic
TTCTCAGGTTGCACGTCACC+CGG 0.488858 8:-72096033 MsG0880046331.01.T01:intron
CATCTGTTCTTGCACAATTG+GGG 0.489816 8:-72093768 MsG0880046331.01.T01:CDS
AGCAGCATAGGCAAGATTCA+TGG 0.491274 8:+72093468 None:intergenic
AGCTGGAAAAGACATAGCTT+TGG 0.491660 8:-72095129 MsG0880046331.01.T01:CDS
CGAGTCATTCTAACTGCATC+CGG 0.492265 8:-72094490 MsG0880046331.01.T01:CDS
AATTATTCACTATGACTTGT+GGG 0.496488 8:-72092657 MsG0880046331.01.T01:CDS
GGACCACCACCAGCATGGCC+AGG 0.499057 8:-72096903 MsG0880046331.01.T01:CDS
CGGGCAAGAGGAAGGACAAA+AGG 0.499562 8:+72095077 None:intergenic
CGTCCTGGCCATGCTGGTGG+TGG 0.499985 8:+72096900 None:intergenic
TCTTCGCTTCAGTGTATCCA+GGG 0.503635 8:-72094535 MsG0880046331.01.T01:intron
TGTTCAGTGCAGTCAACATC+AGG 0.504129 8:-72096924 MsG0880046331.01.T01:CDS
AGGAAGGACAAAAGGACCTC+CGG 0.506111 8:+72095085 None:intergenic
TCAGAACAATAGACTCTGTC+AGG 0.507170 8:+72093703 None:intergenic
AATAAAGAGACACTAATTGC+CGG 0.508829 8:-72095104 MsG0880046331.01.T01:CDS
TACATACCTAAAAGCACCTC+CGG 0.511346 8:+72094471 None:intergenic
AAACCGGACTTAAGTTCAGC+TGG 0.512666 8:+72097172 None:intergenic
CGCTGCACTCCTAAATTCCC+AGG 0.512687 8:-72097124 MsG0880046331.01.T01:intron
AGTAGGCTGTGCAGGACTAA+AGG 0.515160 8:-72095985 MsG0880046331.01.T01:intron
TATGCCTAGGCTCATATTGT+CGG 0.516638 8:+72092325 None:intergenic
TTAAGAAGAATTGGTGGTTG+TGG 0.517158 8:-72092561 MsG0880046331.01.T01:three_prime_UTR
AGTTCTGGGATTGCTCGTCC+TGG 0.518603 8:+72096885 None:intergenic
ACTGATTTAAGAAGAATTGG+TGG 0.519427 8:-72092567 MsG0880046331.01.T01:three_prime_UTR
AAATTATTCACTATGACTTG+TGG 0.522725 8:-72092658 MsG0880046331.01.T01:CDS
CATTACTCTTCTGATAGATC+AGG 0.523314 8:-72096544 MsG0880046331.01.T01:intron
TTTCTAACAGCAACAAGTTG+TGG 0.525340 8:+72096222 None:intergenic
ATTGAATGTATGATTGATTG+TGG 0.526824 8:+72093907 None:intergenic
CACTGGTTCAATTGGAACTC+AGG 0.528010 8:-72096814 MsG0880046331.01.T01:intron
AGTGCAGCGGTTAGACTTGA+GGG 0.531828 8:+72097138 None:intergenic
ACGGGAATAGTAGGCTGTGC+AGG 0.536835 8:-72095993 MsG0880046331.01.T01:CDS
GAGTGCAGCGGTTAGACTTG+AGG 0.537742 8:+72097137 None:intergenic
ACATTCAATGATTGAAACAC+AGG 0.537807 8:-72093893 MsG0880046331.01.T01:intron
ACTGTTGTCACGGGAATAGT+AGG 0.538998 8:-72096002 MsG0880046331.01.T01:CDS
GAGATCATCCCGGGAGAACA+AGG 0.540077 8:-72096144 MsG0880046331.01.T01:CDS
CTGTTCTTGCACAATTGGGG+TGG 0.541920 8:-72093765 MsG0880046331.01.T01:CDS
GTGCACCCTCTGTTAACCCC+TGG 0.548422 8:+72094518 None:intergenic
GGACGAGCAATCCCAGAACT+AGG 0.548767 8:-72096882 MsG0880046331.01.T01:CDS
GATGCAGTCACTGTTGTCAC+GGG 0.557100 8:-72096011 MsG0880046331.01.T01:CDS
GCTCGTCCTGGCCATGCTGG+TGG 0.558823 8:+72096897 None:intergenic
CAAACTAGCAGCATATTCTC+GGG 0.558988 8:+72092634 None:intergenic
AGTGCATCCAACAATAGAGA+TGG 0.563875 8:+72096833 None:intergenic
CATAGTGAATAATTTCCTCA+AGG 0.564756 8:+72092666 None:intergenic
CAATGACGCCTTGTTCTCCC+GGG 0.564820 8:+72096136 None:intergenic
AACATCCCAACTGGAGTATG+GGG 0.571896 8:-72094119 MsG0880046331.01.T01:CDS
AAAATGCTAACACTAGCAGC+TGG 0.572425 8:+72092522 None:intergenic
TATGCTTTCGGGCAAGAGGA+AGG 0.576821 8:+72095069 None:intergenic
GCAGAATGTTCGGAATCAGC+AGG 0.577993 8:+72095032 None:intergenic
CTATAAGATCAATAAAATTG+TGG 0.582103 8:+72092391 None:intergenic
GGATGCAGTCACTGTTGTCA+CGG 0.582145 8:-72096012 MsG0880046331.01.T01:CDS
TGCACTAAGAACACCTGTCA+TGG 0.586245 8:+72093429 None:intergenic
ATGTGGTGGTGACAGAAAAT+GGG 0.587730 8:+72097291 None:intergenic
TCTATTGTTCTGAAGTCACT+TGG 0.588552 8:-72093693 MsG0880046331.01.T01:CDS
ATAGTGAATAATTTCCTCAA+GGG 0.592245 8:+72092667 None:intergenic
GTTGACCTCACCTTCCCTTG+AGG 0.594034 8:-72092681 MsG0880046331.01.T01:CDS
ACGTTATGCTTTCGGGCAAG+AGG 0.594225 8:+72095065 None:intergenic
GTGCATCCAACAATAGAGAT+GGG 0.604941 8:+72096834 None:intergenic
TACAACATCAGCCTTTGTGA+TGG 0.608370 8:-72097212 MsG0880046331.01.T01:exon
CTAGGTAACAAGACTTGGGA+AGG 0.608965 8:-72096864 MsG0880046331.01.T01:CDS
TGACAACAGTGACTGCATCC+GGG 0.616685 8:+72096015 None:intergenic
TGAATAATTTCCTCAAGGGA+AGG 0.623968 8:+72092671 None:intergenic
CTTCGCTTCAGTGTATCCAG+GGG 0.627252 8:-72094534 MsG0880046331.01.T01:intron
AATTTCCTCAAGGGAAGGTG+AGG 0.628083 8:+72092676 None:intergenic
GCATAGGCAAGATTCATGGA+TGG 0.630920 8:+72093472 None:intergenic
GGTTAACAGAGGGTGCACTT+AGG 0.633566 8:-72094513 MsG0880046331.01.T01:CDS
AGAACTAGGTAACAAGACTT+GGG 0.640590 8:-72096868 MsG0880046331.01.T01:CDS
TGTATCCAGGGGTTAACAGA+GGG 0.641373 8:-72094523 MsG0880046331.01.T01:CDS
TGCTAACACTAGCAGCTGGT+AGG 0.641736 8:+72092526 None:intergenic
TGTTCTTATGTAACAAGATG+TGG 0.643340 8:+72097274 None:intergenic
CTGGGAATTTAGGAGTGCAG+CGG 0.643916 8:+72097125 None:intergenic
CATCAGGACCACCACCAGCA+TGG 0.651055 8:-72096908 MsG0880046331.01.T01:CDS
GTGCAGCGGTTAGACTTGAG+GGG 0.671763 8:+72097139 None:intergenic
GTCATTCTAACTGCATCCGG+AGG 0.671792 8:-72094487 MsG0880046331.01.T01:CDS
CAAATTGAGAGCCATCACAA+AGG 0.673604 8:+72097201 None:intergenic
TGCAGCGGTTAGACTTGAGG+GGG 0.676580 8:+72097140 None:intergenic
GGGAGAACAAGGCGTCATTG+AGG 0.682410 8:-72096133 MsG0880046331.01.T01:intron
CAATTGTATACAATGTAGCA+TGG 0.683310 8:-72092473 MsG0880046331.01.T01:three_prime_UTR
AAGAATTGGTGGTTGTGGCG+TGG 0.685663 8:-72092556 MsG0880046331.01.T01:three_prime_UTR
GTGTATCCAGGGGTTAACAG+AGG 0.688037 8:-72094524 MsG0880046331.01.T01:CDS
CTGTCATGGTTCCTCCAGCG+CGG 0.688289 8:+72093443 None:intergenic
GTAGACACTAGATATTGTCG+CGG 0.698614 8:-72096613 MsG0880046331.01.T01:intron
TCTTATGTAACAAGATGTGG+TGG 0.712666 8:+72097277 None:intergenic
AAAGAGACACTAATTGCCGG+AGG 0.715097 8:-72095101 MsG0880046331.01.T01:CDS
TACTTGCAAAGATCAAGACG+AGG 0.743866 8:+72093670 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAACATCA+TGG + Chr8:72092585-72092604 None:intergenic 10.0%
!! GTTATATATATATATATATG+AGG + Chr8:72096600-72096619 None:intergenic 10.0%
!! TGATAGTTAAAATAATAAAA+AGG - Chr8:72096558-72096577 MsG0880046331.01.T01:CDS 10.0%
!! TTAAATTAAAAAGCAATAAA+AGG + Chr8:72094923-72094942 None:intergenic 10.0%
!! ATTTAATGATTATCAAAAGA+CGG + Chr8:72095818-72095837 None:intergenic 15.0%
!! GTTAAAATAATAAAAAGGAT+TGG - Chr8:72096563-72096582 MsG0880046331.01.T01:CDS 15.0%
!! TACTAATATATTGCTTATAA+TGG - Chr8:72094105-72094124 MsG0880046331.01.T01:CDS 15.0%
!!! TTAATTATTTTTTCCTTTCT+AGG - Chr8:72095861-72095880 MsG0880046331.01.T01:intron 15.0%
!!! TTCATAATCATTTGATTTTT+AGG - Chr8:72092653-72092672 MsG0880046331.01.T01:CDS 15.0%
!! AACAAATTTACTATATACTC+GGG + Chr8:72095644-72095663 None:intergenic 20.0%
!! ATATGTGAAATATATGAGTT+CGG + Chr8:72095018-72095037 None:intergenic 20.0%
!! ATATTTCACATATTATACTC+TGG - Chr8:72095025-72095044 MsG0880046331.01.T01:CDS 20.0%
!! CAATTCAAAATTTGATTACA+TGG + Chr8:72093154-72093173 None:intergenic 20.0%
!! CTAATTAATTGTATGGTTTA+AGG - Chr8:72093315-72093334 MsG0880046331.01.T01:intron 20.0%
!! CTATAAGATCAATAAAATTG+TGG + Chr8:72097267-72097286 None:intergenic 20.0%
!! GAACAAATTTACTATATACT+CGG + Chr8:72095645-72095664 None:intergenic 20.0%
!! TCATTAAATCCACATTTAAT+TGG - Chr8:72096870-72096889 MsG0880046331.01.T01:CDS 20.0%
!! TGGTAAAAATCAAAGTAATA+TGG + Chr8:72096692-72096711 None:intergenic 20.0%
!! TGTGGCAAAAAAATATTTAA+CGG - Chr8:72094802-72094821 MsG0880046331.01.T01:intron 20.0%
!! TTAAAAACTTTGTATTTGCA+TGG + Chr8:72096441-72096460 None:intergenic 20.0%
!! TTATTACATGTAAAATTGCA+AGG - Chr8:72093987-72094006 MsG0880046331.01.T01:intron 20.0%
!! TTCTATTAATAAATGAAGCA+GGG + Chr8:72095093-72095112 None:intergenic 20.0%
!! TTTAATAAAAAAGATGTCAG+AGG + Chr8:72095051-72095070 None:intergenic 20.0%
!! TTTCTATTAATAAATGAAGC+AGG + Chr8:72095094-72095113 None:intergenic 20.0%
!!! ACCAGTCTTATTTTTATATT+AGG - Chr8:72094017-72094036 MsG0880046331.01.T01:intron 20.0%
!!! ATAATCATTTGATTTTTAGG+TGG - Chr8:72092656-72092675 MsG0880046331.01.T01:CDS 20.0%
!!! ATATTTATTAGCATTTGTTG+TGG - Chr8:72096644-72096663 MsG0880046331.01.T01:intron 20.0%
!!! ATTTTTCTCCTTAATTTCTT+TGG - Chr8:72097151-72097170 MsG0880046331.01.T01:CDS 20.0%
!!! CAGATTTTGAAAGATAAAAA+GGG - Chr8:72097214-72097233 MsG0880046331.01.T01:exon 20.0%
!!! CCAGTCTTATTTTTATATTA+GGG - Chr8:72094018-72094037 MsG0880046331.01.T01:intron 20.0%
!!! CTTTTTATCTTTCAAAATCT+GGG + Chr8:72097215-72097234 None:intergenic 20.0%
!!! GATAAAAAGGGTTTTATTAA+TGG - Chr8:72097226-72097245 MsG0880046331.01.T01:five_prime_UTR 20.0%
!!! GTTTTGTTTTTTATTTGACT+CGG + Chr8:72093915-72093934 None:intergenic 20.0%
!!! TAATAAAAAGGATTGGTTAT+TGG - Chr8:72096570-72096589 MsG0880046331.01.T01:CDS 20.0%
!!! TATTTTAACTATCAGTATGA+AGG + Chr8:72096552-72096571 None:intergenic 20.0%
!!! TTATCTTTTCTGAAATGAAA+AGG - Chr8:72095276-72095295 MsG0880046331.01.T01:intron 20.0%
!!! TTTGAAGCTAATTAATTGTA+TGG - Chr8:72093308-72093327 MsG0880046331.01.T01:intron 20.0%
!!! TTTTTATCTTTCAAAATCTG+GGG + Chr8:72097214-72097233 None:intergenic 20.0%
!!! TTTTTTTGTGGTAATTGAAT+AGG - Chr8:72092926-72092945 MsG0880046331.01.T01:intron 20.0%
! AAAAACATCATGGTACATAA+TGG + Chr8:72092575-72092594 None:intergenic 25.0%
! AAATTATTCACTATGACTTG+TGG - Chr8:72096997-72097016 MsG0880046331.01.T01:intron 25.0%
! ACATTGAAGGACTAATTTAA+CGG - Chr8:72094253-72094272 MsG0880046331.01.T01:intron 25.0%
! ATAGTGAATAATTTCCTCAA+GGG + Chr8:72096991-72097010 None:intergenic 25.0%
! ATTCTTTACTTCACAATTTG+TGG + Chr8:72094070-72094089 None:intergenic 25.0%
! ATTGAAGCACATTACTTATT+TGG - Chr8:72095691-72095710 MsG0880046331.01.T01:intron 25.0%
! ATTGAATGTATGATTGATTG+TGG + Chr8:72095751-72095770 None:intergenic 25.0%
! CAATCCTTTATACATTATCA+TGG - Chr8:72095929-72095948 MsG0880046331.01.T01:intron 25.0%
! CATTGTATACAATTGTTCAA+TGG + Chr8:72097177-72097196 None:intergenic 25.0%
! CCCTAATATAAAAATAAGAC+TGG + Chr8:72094021-72094040 None:intergenic 25.0%
! GCAAAATAACCAATTAAATG+TGG + Chr8:72096882-72096901 None:intergenic 25.0%
! GGGAAAAAATATTAATCTCT+TGG - Chr8:72093379-72093398 MsG0880046331.01.T01:intron 25.0%
! TAGCTTATGAAAAACGATAT+TGG + Chr8:72093591-72093610 None:intergenic 25.0%
! TATGTGAAATATATGAGTTC+GGG + Chr8:72095017-72095036 None:intergenic 25.0%
! TCCATCATGATATGAAAAAT+TGG + Chr8:72095363-72095382 None:intergenic 25.0%
! TCTACAACAAAACTAAGAAA+GGG + Chr8:72095416-72095435 None:intergenic 25.0%
! TCTATTAATAAATGAAGCAG+GGG + Chr8:72095092-72095111 None:intergenic 25.0%
! TGTGGCAAAAAAATATCTAA+CGG + Chr8:72094954-72094973 None:intergenic 25.0%
! TTACAAAAGAGTCGAAAAAA+GGG + Chr8:72093707-72093726 None:intergenic 25.0%
! TTGGCTAATAAAAAAATGAG+AGG + Chr8:72094490-72094509 None:intergenic 25.0%
!! AATTATTCACTATGACTTGT+GGG - Chr8:72096998-72097017 MsG0880046331.01.T01:intron 25.0%
!! ATTTTCTTCAGTATGAACTA+TGG + Chr8:72096037-72096056 None:intergenic 25.0%
!! CATGATAATGTATAAAGGAT+TGG + Chr8:72095931-72095950 None:intergenic 25.0%
!! CCTTTTTATCTTTCAAAATC+TGG + Chr8:72097216-72097235 None:intergenic 25.0%
!! GTTTCTGTTTTCTTAAAACT+CGG - Chr8:72093196-72093215 MsG0880046331.01.T01:intron 25.0%
!! TAGCTATTTGGATATTTTCA+AGG - Chr8:72096914-72096933 MsG0880046331.01.T01:CDS 25.0%
!! TTTCTGTTTTCTTAAAACTC+GGG - Chr8:72093197-72093216 MsG0880046331.01.T01:intron 25.0%
!!! AGTTTTAAGAAAACAGAAAC+TGG + Chr8:72093196-72093215 None:intergenic 25.0%
!!! ATCACTGATTTAAGAAGAAT+TGG - Chr8:72097085-72097104 MsG0880046331.01.T01:intron 25.0%
!!! ATTTGTTCTACTTATTTTGC+AGG - Chr8:72095657-72095676 MsG0880046331.01.T01:intron 25.0%
!!! CCAGATTTTGAAAGATAAAA+AGG - Chr8:72097213-72097232 MsG0880046331.01.T01:exon 25.0%
!!! GCTTTGAAAAGAAAAGAAAA+TGG - Chr8:72092683-72092702 MsG0880046331.01.T01:CDS 25.0%
!!! GGAAGTAAAACTTATTTTGA+AGG + Chr8:72096391-72096410 None:intergenic 25.0%
!!! GTATTTTTACGTTATGCTTT+CGG + Chr8:72094601-72094620 None:intergenic 25.0%
!!! TATTTTTACGTTATGCTTTC+GGG + Chr8:72094600-72094619 None:intergenic 25.0%
!!! TTAATATTTTTTCCCACAGT+TGG + Chr8:72093374-72093393 None:intergenic 25.0%
!!! TTTGTTCTACTTATTTTGCA+GGG - Chr8:72095658-72095677 MsG0880046331.01.T01:intron 25.0%
AAAAAGAAGCAACTGAACAT+GGG + Chr8:72095243-72095262 None:intergenic 30.0%
AAACATCAATGATAACAACC+AGG - Chr8:72093957-72093976 MsG0880046331.01.T01:CDS 30.0%
AACTAAGAAAGGGAAATTCA+AGG + Chr8:72095406-72095425 None:intergenic 30.0%
AACTATGGAAACGAAATTAG+GGG + Chr8:72096022-72096041 None:intergenic 30.0%
AATAAAGAGACACTAATTGC+CGG - Chr8:72094551-72094570 MsG0880046331.01.T01:intron 30.0%
AATATCCAAATAGCTAATCC+TGG + Chr8:72096910-72096929 None:intergenic 30.0%
ACAGTCATGTAGATCATATA+GGG + Chr8:72095439-72095458 None:intergenic 30.0%
ACATGTAATAAGATAAGACC+TGG + Chr8:72093978-72093997 None:intergenic 30.0%
ACATTCAATGATTGAAACAC+AGG - Chr8:72095762-72095781 MsG0880046331.01.T01:intron 30.0%
ATCAGCAAAATAGACATTGA+AGG - Chr8:72094240-72094259 MsG0880046331.01.T01:intron 30.0%
CAATTGTATACAATGTAGCA+TGG - Chr8:72097182-72097201 MsG0880046331.01.T01:CDS 30.0%
CATAGTGAATAATTTCCTCA+AGG + Chr8:72096992-72097011 None:intergenic 30.0%
CTGAAAAATAGCAGAATGTT+CGG + Chr8:72094636-72094655 None:intergenic 30.0%
GAAAGATGTTGAACAAAAAC+CGG - Chr8:72093489-72093508 MsG0880046331.01.T01:CDS 30.0%
GAAATGAAAAGGAACCAAAA+GGG - Chr8:72095287-72095306 MsG0880046331.01.T01:intron 30.0%
GAACTATGGAAACGAAATTA+GGG + Chr8:72096023-72096042 None:intergenic 30.0%
GCATATTCACATTTCAAACA+TGG + Chr8:72096118-72096137 None:intergenic 30.0%
GGATAATTATCTTGAGGTTA+CGG + Chr8:72096420-72096439 None:intergenic 30.0%
GTATGTAAAATAAACCTGAG+TGG - Chr8:72095200-72095219 MsG0880046331.01.T01:intron 30.0%
GTCTACAACAAAACTAAGAA+AGG + Chr8:72095417-72095436 None:intergenic 30.0%
GTTACAAAAGAGTCGAAAAA+AGG + Chr8:72093708-72093727 None:intergenic 30.0%
GTTTCGCTTCATGATTAATA+GGG - Chr8:72095465-72095484 MsG0880046331.01.T01:intron 30.0%
TAAAAAGAAGCAACTGAACA+TGG + Chr8:72095244-72095263 None:intergenic 30.0%
TAACGGCTAAATGAATGTTT+GGG - Chr8:72094270-72094289 MsG0880046331.01.T01:intron 30.0%
TACAGTCATGTAGATCATAT+AGG + Chr8:72095440-72095459 None:intergenic 30.0%
TCTTGGTATTTATGTTACAC+AGG - Chr8:72093396-72093415 MsG0880046331.01.T01:CDS 30.0%
TGAAATGAAAAGGAACCAAA+AGG - Chr8:72095286-72095305 MsG0880046331.01.T01:intron 30.0%
TGAACTATGGAAACGAAATT+AGG + Chr8:72096024-72096043 None:intergenic 30.0%
TGAACTTGGTCATTAAATGT+TGG - Chr8:72094139-72094158 MsG0880046331.01.T01:CDS 30.0%
TGTTCTTATGTAACAAGATG+TGG + Chr8:72092384-72092403 None:intergenic 30.0%
TGTTTCGCTTCATGATTAAT+AGG - Chr8:72095464-72095483 MsG0880046331.01.T01:intron 30.0%
TTAACGGCTAAATGAATGTT+TGG - Chr8:72094269-72094288 MsG0880046331.01.T01:intron 30.0%
TTAAGAAAACAGAAACTGGA+AGG + Chr8:72093192-72093211 None:intergenic 30.0%
TTCAATGGCCAAAGAAATTA+AGG + Chr8:72097162-72097181 None:intergenic 30.0%
TTCACACATTACAAACCTTT+GGG - Chr8:72094208-72094227 MsG0880046331.01.T01:intron 30.0%
TTGAATATACTACCAACTGT+GGG - Chr8:72093359-72093378 MsG0880046331.01.T01:intron 30.0%
TTGCATGGATAATTATCTTG+AGG + Chr8:72096426-72096445 None:intergenic 30.0%
TTTCTGTACAAGAAACTTCA+AGG + Chr8:72093263-72093282 None:intergenic 30.0%
TTTGAATATACTACCAACTG+TGG - Chr8:72093358-72093377 MsG0880046331.01.T01:intron 30.0%
! AACCTTGAATGTGTCTTTTT+CGG - Chr8:72094176-72094195 MsG0880046331.01.T01:intron 30.0%
! ACTGATTTAAGAAGAATTGG+TGG - Chr8:72097088-72097107 MsG0880046331.01.T01:intron 30.0%
! GCCAATTTTTCATATCATGA+TGG - Chr8:72095359-72095378 MsG0880046331.01.T01:intron 30.0%
! TCAGTTGCTTCTTTTTATGT+TGG - Chr8:72095247-72095266 MsG0880046331.01.T01:intron 30.0%
! TGAAAATGAGTCGGTATTTT+GGG + Chr8:72096466-72096485 None:intergenic 30.0%
! TGTTTGAAATGTGAATATGC+AGG - Chr8:72096118-72096137 MsG0880046331.01.T01:intron 30.0%
! TTTTTATTAGCCAACAGTTG+CGG - Chr8:72094496-72094515 MsG0880046331.01.T01:CDS 30.0%
!! CACAAATCCATTTTAAAGAG+AGG + Chr8:72092903-72092922 None:intergenic 30.0%
!! CATTCTAAAGCATTTAGGAT+GGG - Chr8:72093222-72093241 MsG0880046331.01.T01:intron 30.0%
!! TCATTCTAAAGCATTTAGGA+TGG - Chr8:72093221-72093240 MsG0880046331.01.T01:intron 30.0%
!! TGGCTTATATATTTCGAGTT+CGG - Chr8:72094722-72094741 MsG0880046331.01.T01:intron 30.0%
!! TTTGGATATTTTCAAGGTTG+TGG - Chr8:72096920-72096939 MsG0880046331.01.T01:CDS 30.0%
!!! GGATTTGTGTTGTTTTTTTG+TGG - Chr8:72092914-72092933 MsG0880046331.01.T01:intron 30.0%
AACCGAAAAAGACACATTCA+AGG + Chr8:72094181-72094200 None:intergenic 35.0%
AACGGCTAAATGAATGTTTG+GGG - Chr8:72094271-72094290 MsG0880046331.01.T01:intron 35.0%
AACTTGCATCTGTATTCAGT+AGG - Chr8:72096617-72096636 MsG0880046331.01.T01:intron 35.0%
AAGAAAGAACCTGGGAATTT+AGG + Chr8:72092543-72092562 None:intergenic 35.0%
AAGCTCCATTTACTCCATTT+AGG - Chr8:72094763-72094782 MsG0880046331.01.T01:intron 35.0%
AATTATCTTGAGGTTACGGT+GGG + Chr8:72096416-72096435 None:intergenic 35.0%
AATTGAATAGGTGACAGGAA+AGG - Chr8:72092938-72092957 MsG0880046331.01.T01:intron 35.0%
ACATCTTTCAGTTTCTCAAC+AGG + Chr8:72095496-72095515 None:intergenic 35.0%
ACTATGGAAACGAAATTAGG+GGG + Chr8:72096021-72096040 None:intergenic 35.0%
ACTTGCATCTGTATTCAGTA+GGG - Chr8:72096618-72096637 MsG0880046331.01.T01:intron 35.0%
AGAACAGATGAATCCTAGAA+AGG + Chr8:72095877-72095896 None:intergenic 35.0%
AGAACTAGGTAACAAGACTT+GGG - Chr8:72092787-72092806 MsG0880046331.01.T01:intron 35.0%
AGCCAACACAACATAGTATA+AGG + Chr8:72095794-72095813 None:intergenic 35.0%
AGCTCCATTTACTCCATTTA+GGG - Chr8:72094764-72094783 MsG0880046331.01.T01:intron 35.0%
AGTGTCTACAAAACCATACA+GGG + Chr8:72093031-72093050 None:intergenic 35.0%
ATAAGAACACTGCACTTTCT+TGG - Chr8:72092395-72092414 MsG0880046331.01.T01:three_prime_UTR 35.0%
ATGACCAAGTTCATGCAATA+TGG + Chr8:72094132-72094151 None:intergenic 35.0%
ATGCATTAAAACATCCCAAC+TGG - Chr8:72095527-72095546 MsG0880046331.01.T01:intron 35.0%
ATGCTCCATTTACTCCATTT+AGG + Chr8:72094993-72095012 None:intergenic 35.0%
CAAACCCTAAATGGAGTAAA+TGG - Chr8:72094985-72095004 MsG0880046331.01.T01:intron 35.0%
CAAACCCTAAATGGAGTAAA+TGG + Chr8:72095004-72094985 None:intergenic 35.0%
CAGTCATAATAGTACACGAA+TGG + Chr8:72094329-72094348 None:intergenic 35.0%
CATTACTCTTCTGATAGATC+AGG - Chr8:72093111-72093130 MsG0880046331.01.T01:intron 35.0%
CTTTGTGAAAGCAAGATTCT+GGG + Chr8:72096519-72096538 None:intergenic 35.0%
GAAAATAGACAGATTCACCT+AGG - Chr8:72096051-72096070 MsG0880046331.01.T01:intron 35.0%
GACAGAAAATCAAACATTGC+AGG + Chr8:72092980-72092999 None:intergenic 35.0%
GACCTTATACTATGTTGTGT+TGG - Chr8:72095789-72095808 MsG0880046331.01.T01:intron 35.0%
GATGGATACTTAATGTTGTC+AGG + Chr8:72096168-72096187 None:intergenic 35.0%
GCTATTGTTTGTGTATTCTC+AGG - Chr8:72093607-72093626 MsG0880046331.01.T01:intron 35.0%
GCTTCATGATTAATAGGGAT+TGG - Chr8:72095470-72095489 MsG0880046331.01.T01:intron 35.0%
GGCAATTAGTGTCTCTTTAT+TGG + Chr8:72094552-72094571 None:intergenic 35.0%
GTAATATGGCCACACAATTA+AGG + Chr8:72096678-72096697 None:intergenic 35.0%
GTAGTGAACTATAGATACTC+TGG - Chr8:72094702-72094721 MsG0880046331.01.T01:intron 35.0%
GTCTTGAATCCTTAATTGTG+TGG - Chr8:72096666-72096685 MsG0880046331.01.T01:intron 35.0%
GTGTACTATTATGACTGATG+TGG - Chr8:72094332-72094351 MsG0880046331.01.T01:intron 35.0%
GTTCACACATTACAAACCTT+TGG - Chr8:72094207-72094226 MsG0880046331.01.T01:intron 35.0%
GTTGTGATATGAGAGAAGAA+TGG + Chr8:72094898-72094917 None:intergenic 35.0%
TAAATGGAGCTTAGCCTAAA+TGG + Chr8:72094755-72094774 None:intergenic 35.0%
TAATTATCTTGAGGTTACGG+TGG + Chr8:72096417-72096436 None:intergenic 35.0%
TAGTGTCTACAAAACCATAC+AGG + Chr8:72093032-72093051 None:intergenic 35.0%
TATGGGGAAAAAGATAACTG+TGG - Chr8:72095552-72095571 MsG0880046331.01.T01:intron 35.0%
TCACAAACCTGAAAATGAGT+CGG + Chr8:72096475-72096494 None:intergenic 35.0%
TCATCTGTTCTTGCACAATT+GGG - Chr8:72095886-72095905 MsG0880046331.01.T01:intron 35.0%
TCTTATGTAACAAGATGTGG+TGG + Chr8:72092381-72092400 None:intergenic 35.0%
TGAATAATTTCCTCAAGGGA+AGG + Chr8:72096987-72097006 None:intergenic 35.0%
TGACCAAGTTCATGCAATAT+GGG + Chr8:72094131-72094150 None:intergenic 35.0%
TGCTCCATTTACTCCATTTA+GGG + Chr8:72094992-72095011 None:intergenic 35.0%
TGTCAATTTGAAAAAGGAGC+CGG + Chr8:72096815-72096834 None:intergenic 35.0%
TTCATCTGTTCTTGCACAAT+TGG - Chr8:72095885-72095904 MsG0880046331.01.T01:intron 35.0%
TTTCTAACAGCAACAAGTTG+TGG + Chr8:72093436-72093455 None:intergenic 35.0%
! ATGTATCATTTTCCCCTGTA+TGG - Chr8:72093015-72093034 MsG0880046331.01.T01:intron 35.0%
! CAACAATAGAGATGGGTTTA+GGG + Chr8:72092817-72092836 None:intergenic 35.0%
! CAGGCCATGATAATGTATAA+AGG + Chr8:72095936-72095955 None:intergenic 35.0%
! CATTTACTCCATTTAGGGTT+TGG - Chr8:72094769-72094788 MsG0880046331.01.T01:intron 35.0%
! CATTTACTCCATTTAGGGTT+TGG + Chr8:72094788-72094769 None:intergenic 35.0%
! CTGAAAATGAGTCGGTATTT+TGG + Chr8:72096467-72096486 None:intergenic 35.0%
! GAGCACTGTCAATTTGAAAA+AGG + Chr8:72096821-72096840 None:intergenic 35.0%
! TATGTCTTTTCCAGCTTCTA+TGG + Chr8:72094522-72094541 None:intergenic 35.0%
! TGTAAAGAACTGAAAAGTGC+TGG + Chr8:72096712-72096731 None:intergenic 35.0%
! TTAAGAAGAATTGGTGGTTG+TGG - Chr8:72097094-72097113 MsG0880046331.01.T01:intron 35.0%
!! AAGTCTTGTTACCTAGTTCT+GGG + Chr8:72092787-72092806 None:intergenic 35.0%
!! CTCAGCTACACTTTTTAACA+AGG - Chr8:72095576-72095595 MsG0880046331.01.T01:intron 35.0%
!! GGCTTATATATTTCGAGTTC+GGG - Chr8:72094723-72094742 MsG0880046331.01.T01:intron 35.0%
!! GGGTTCATTCTAAAGCATTT+AGG - Chr8:72093217-72093236 MsG0880046331.01.T01:intron 35.0%
!! TAGGGCATTGATAGTTTGAA+AGG - Chr8:72094036-72094055 MsG0880046331.01.T01:intron 35.0%
!! TCTATTGTTCTGAAGTCACT+TGG - Chr8:72095962-72095981 MsG0880046331.01.T01:intron 35.0%
!! TGTTTCCAGGATTAGCTATT+TGG - Chr8:72096902-72096921 MsG0880046331.01.T01:CDS 35.0%
!!! CAAAATACCGACTCATTTTC+AGG - Chr8:72096465-72096484 MsG0880046331.01.T01:intron 35.0%
!!! CGAACATTCTGCTATTTTTC+AGG - Chr8:72094634-72094653 MsG0880046331.01.T01:intron 35.0%
!!! GTTGGGATGTTTTAATGCAT+CGG + Chr8:72095527-72095546 None:intergenic 35.0%
!!! TTGGTTATTTTGCTGTTTCC+AGG - Chr8:72096889-72096908 MsG0880046331.01.T01:CDS 35.0%
AAAACATCCCAACTGGAGTA+TGG - Chr8:72095534-72095553 MsG0880046331.01.T01:intron 40.0%
AAAATGCTAACACTAGCAGC+TGG + Chr8:72097136-72097155 None:intergenic 40.0%
AAACATCCCAACTGGAGTAT+GGG - Chr8:72095535-72095554 MsG0880046331.01.T01:intron 40.0%
ACTGAAGAGAAGAAAGAACC+TGG + Chr8:72092552-72092571 None:intergenic 40.0%
ACTGCAAAAACTCTATGCCT+AGG + Chr8:72096071-72096090 None:intergenic 40.0%
AGCCTAAAACCTATGAAGCA+TGG + Chr8:72096843-72096862 None:intergenic 40.0%
AGCTGGAAAAGACATAGCTT+TGG - Chr8:72094526-72094545 MsG0880046331.01.T01:CDS 40.0%
AGGAACCAAAAGGGAATGTA+TGG - Chr8:72095296-72095315 MsG0880046331.01.T01:intron 40.0%
AGTGCATCCAACAATAGAGA+TGG + Chr8:72092825-72092844 None:intergenic 40.0%
ATCTCTATTGTTGGATGCAC+TGG - Chr8:72092824-72092843 MsG0880046331.01.T01:intron 40.0%
CAAACTAGCAGCATATTCTC+GGG + Chr8:72097024-72097043 None:intergenic 40.0%
CAAATTGAGAGCCATCACAA+AGG + Chr8:72092457-72092476 None:intergenic 40.0%
CAGAACTAGGTAACAAGACT+TGG - Chr8:72092786-72092805 MsG0880046331.01.T01:intron 40.0%
CATCTGTTCTTGCACAATTG+GGG - Chr8:72095887-72095906 MsG0880046331.01.T01:intron 40.0%
CCAAGCAAAACATGACCATT+AGG - Chr8:72096745-72096764 MsG0880046331.01.T01:intron 40.0%
CCTAAACCCATCTCTATTGT+TGG - Chr8:72092815-72092834 MsG0880046331.01.T01:intron 40.0%
CGTCTTGATCTTTGCAAGTA+CGG - Chr8:72095988-72096007 MsG0880046331.01.T01:CDS 40.0%
CTGAAGAGAAGAAAGAACCT+GGG + Chr8:72092551-72092570 None:intergenic 40.0%
GAAATGTGAATATGCAGGCT+TGG - Chr8:72096123-72096142 MsG0880046331.01.T01:intron 40.0%
GAACATGACACAGTTCCTAA+TGG + Chr8:72096763-72096782 None:intergenic 40.0%
GACTGATGTGGTATCTTTCA+AGG - Chr8:72094344-72094363 MsG0880046331.01.T01:intron 40.0%
GAGTCGAAAAAAGGGAAAAG+AGG + Chr8:72093699-72093718 None:intergenic 40.0%
GCAAACTAGCAGCATATTCT+CGG + Chr8:72097025-72097044 None:intergenic 40.0%
GCGACAACTCTAAACTTATC+TGG + Chr8:72093073-72093092 None:intergenic 40.0%
GCTGATTGAATTAGTCCCAA+AGG + Chr8:72094226-72094245 None:intergenic 40.0%
GCTTTGTGAAAGCAAGATTC+TGG + Chr8:72096520-72096539 None:intergenic 40.0%
GTAGACACTAGATATTGTCG+CGG - Chr8:72093042-72093061 MsG0880046331.01.T01:intron 40.0%
GTCAATTTGAAAAAGGAGCC+GGG + Chr8:72096814-72096833 None:intergenic 40.0%
GTGCATCCAACAATAGAGAT+GGG + Chr8:72092824-72092843 None:intergenic 40.0%
GTGGTAATTGAATAGGTGAC+AGG - Chr8:72092933-72092952 MsG0880046331.01.T01:intron 40.0%
GTGTCTACAAAACCATACAG+GGG + Chr8:72093030-72093049 None:intergenic 40.0%
TACAACATCAGCCTTTGTGA+TGG - Chr8:72092443-72092462 MsG0880046331.01.T01:three_prime_UTR 40.0%
TACTTGCAAAGATCAAGACG+AGG + Chr8:72095988-72096007 None:intergenic 40.0%
TCAGAACAATAGACTCTGTC+AGG + Chr8:72095955-72095974 None:intergenic 40.0%
TCTTGCATCCAAACCCTAAA+TGG - Chr8:72094976-72094995 MsG0880046331.01.T01:intron 40.0%
TCTTGCATCCAAACCCTAAA+TGG + Chr8:72094995-72094976 None:intergenic 40.0%
! AAGATTCTGGGAGAGTCAAA+TGG + Chr8:72096507-72096526 None:intergenic 40.0%
! ATGTGGTGGTGACAGAAAAT+GGG + Chr8:72092367-72092386 None:intergenic 40.0%
! CAAGGTTTTCCACGATCAAT+GGG + Chr8:72095388-72095407 None:intergenic 40.0%
! CCAACAATAGAGATGGGTTT+AGG + Chr8:72092818-72092837 None:intergenic 40.0%
! CCTAATGGTCATGTTTTGCT+TGG + Chr8:72096748-72096767 None:intergenic 40.0%
! CTCCATGCTTCATAGGTTTT+AGG - Chr8:72096838-72096857 MsG0880046331.01.T01:CDS 40.0%
! CTGCAGTCCTCTCTTTAAAA+TGG - Chr8:72092893-72092912 MsG0880046331.01.T01:intron 40.0%
! TCAAGGTTTTCCACGATCAA+TGG + Chr8:72095389-72095408 None:intergenic 40.0%
! TTTTTCCCCATACTCCAGTT+GGG + Chr8:72095544-72095563 None:intergenic 40.0%
!! CAAGTCTTGTTACCTAGTTC+TGG + Chr8:72092788-72092807 None:intergenic 40.0%
!! TACATACCTAAAAGCACCTC+CGG + Chr8:72095187-72095206 None:intergenic 40.0%
AAACCGGACTTAAGTTCAGC+TGG + Chr8:72092486-72092505 None:intergenic 45.0%
AAAGAGACACTAATTGCCGG+AGG - Chr8:72094554-72094573 MsG0880046331.01.T01:intron 45.0%
AACATCCCAACTGGAGTATG+GGG - Chr8:72095536-72095555 MsG0880046331.01.T01:intron 45.0%
AATTTCCTCAAGGGAAGGTG+AGG + Chr8:72096982-72097001 None:intergenic 45.0%
ACAAAAACCGGAGATCATCC+CGG - Chr8:72093501-72093520 MsG0880046331.01.T01:CDS 45.0%
ACTGTTGTCACGGGAATAGT+AGG - Chr8:72093653-72093672 MsG0880046331.01.T01:intron 45.0%
AGCAACTGAACATGGGAAAC+AGG + Chr8:72095236-72095255 None:intergenic 45.0%
AGCAGCATAGGCAAGATTCA+TGG + Chr8:72096190-72096209 None:intergenic 45.0%
AGTTCGGGTATGCTCCATTT+AGG - Chr8:72094738-72094757 MsG0880046331.01.T01:intron 45.0%
ATGAATCTTGCCTATGCTGC+TGG - Chr8:72096189-72096208 MsG0880046331.01.T01:CDS 45.0%
CGAGTCATTCTAACTGCATC+CGG - Chr8:72095165-72095184 MsG0880046331.01.T01:intron 45.0%
CTAGGTAACAAGACTTGGGA+AGG - Chr8:72092791-72092810 MsG0880046331.01.T01:intron 45.0%
GATCAGTCTCATGCTAGAAC+AGG + Chr8:72097068-72097087 None:intergenic 45.0%
GCATAGGCAAGATTCATGGA+TGG + Chr8:72096186-72096205 None:intergenic 45.0%
TCTCCAGCTGAACTTAAGTC+CGG - Chr8:72092480-72092499 MsG0880046331.01.T01:three_prime_UTR 45.0%
TCTTCGCTTCAGTGTATCCA+GGG - Chr8:72095120-72095139 MsG0880046331.01.T01:CDS 45.0%
TGATGGAAACCCATTGATCG+TGG - Chr8:72095376-72095395 MsG0880046331.01.T01:intron 45.0%
TGCACTAAGAACACCTGTCA+TGG + Chr8:72096229-72096248 None:intergenic 45.0%
TGCATCTGTATTCAGTAGGG+TGG - Chr8:72096621-72096640 MsG0880046331.01.T01:intron 45.0%
TGGCCCATATTGCATGAACT+TGG - Chr8:72094125-72094144 MsG0880046331.01.T01:CDS 45.0%
TGTATCCAGGGGTTAACAGA+GGG - Chr8:72095132-72095151 MsG0880046331.01.T01:CDS 45.0%
TGTTCAGTGCAGTCAACATC+AGG - Chr8:72092731-72092750 MsG0880046331.01.T01:CDS 45.0%
TTCTTCGCTTCAGTGTATCC+AGG - Chr8:72095119-72095138 MsG0880046331.01.T01:CDS 45.0%
! AGGATTGGCAAACGCATATC+AGG + Chr8:72095916-72095935 None:intergenic 45.0%
! CTTTTTCCCCATACTCCAGT+TGG + Chr8:72095545-72095564 None:intergenic 45.0%
! GATGTGGTGGTGACAGAAAA+TGG + Chr8:72092368-72092387 None:intergenic 45.0%
! GTGTGCCATACATTCCCTTT+TGG + Chr8:72095304-72095323 None:intergenic 45.0%
!! CACTGGTTCAATTGGAACTC+AGG - Chr8:72092841-72092860 MsG0880046331.01.T01:intron 45.0%
!! GTTGGATGCACTGGTTCAAT+TGG - Chr8:72092833-72092852 MsG0880046331.01.T01:intron 45.0%
ACGTTATGCTTTCGGGCAAG+AGG + Chr8:72094593-72094612 None:intergenic 50.0%
AGGAAGGACAAAAGGACCTC+CGG + Chr8:72094573-72094592 None:intergenic 50.0%
AGTAGGCTGTGCAGGACTAA+AGG - Chr8:72093670-72093689 MsG0880046331.01.T01:intron 50.0%
AGTGCAGCGGTTAGACTTGA+GGG + Chr8:72092520-72092539 None:intergenic 50.0%
ATCTTGAGGTTACGGTGGGA+TGG + Chr8:72096412-72096431 None:intergenic 50.0%
CAAAAACCGGAGATCATCCC+GGG - Chr8:72093502-72093521 MsG0880046331.01.T01:CDS 50.0%
CACTAGCAGCTGGTAGGAAT+CGG + Chr8:72097126-72097145 None:intergenic 50.0%
CTGTTCTTGCACAATTGGGG+TGG - Chr8:72095890-72095909 MsG0880046331.01.T01:intron 50.0%
CTTCGCTTCAGTGTATCCAG+GGG - Chr8:72095121-72095140 MsG0880046331.01.T01:CDS 50.0%
GACAGTGCTCCATGCTTCAT+AGG - Chr8:72096831-72096850 MsG0880046331.01.T01:CDS 50.0%
GAGGGGGTCAGTGAAAAAAC+CGG + Chr8:72092502-72092521 None:intergenic 50.0%
GATGCAGTCACTGTTGTCAC+GGG - Chr8:72093644-72093663 MsG0880046331.01.T01:intron 50.0%
GCAGAATGTTCGGAATCAGC+AGG + Chr8:72094626-72094645 None:intergenic 50.0%
GCGTCATTGAGGTGGACATT+TGG - Chr8:72093533-72093552 MsG0880046331.01.T01:intron 50.0%
GGATGCAGTCACTGTTGTCA+CGG - Chr8:72093643-72093662 MsG0880046331.01.T01:intron 50.0%
GGGTTTGGATGCAAGACATG+TGG - Chr8:72094784-72094803 MsG0880046331.01.T01:intron 50.0%
GGGTTTGGATGCAAGACATG+TGG + Chr8:72094803-72094784 None:intergenic 50.0%
GTCATTCTAACTGCATCCGG+AGG - Chr8:72095168-72095187 MsG0880046331.01.T01:intron 50.0%
GTGACAACAGTGACTGCATC+CGG + Chr8:72093644-72093663 None:intergenic 50.0%
GTGTATCCAGGGGTTAACAG+AGG - Chr8:72095131-72095150 MsG0880046331.01.T01:CDS 50.0%
TATGCTTTCGGGCAAGAGGA+AGG + Chr8:72094589-72094608 None:intergenic 50.0%
TGACAACAGTGACTGCATCC+GGG + Chr8:72093643-72093662 None:intergenic 50.0%
TGCGTGTAGATGCATGCACA+CGG + Chr8:72093763-72093782 None:intergenic 50.0%
TGCTAACACTAGCAGCTGGT+AGG + Chr8:72097132-72097151 None:intergenic 50.0%
! AAGAATTGGTGGTTGTGGCG+TGG - Chr8:72097099-72097118 MsG0880046331.01.T01:intron 50.0%
! AGAACAAGGCGTCATTGAGG+TGG - Chr8:72093525-72093544 MsG0880046331.01.T01:intron 50.0%
! CTGGGAATTTAGGAGTGCAG+CGG + Chr8:72092533-72092552 None:intergenic 50.0%
! GGTTAACAGAGGGTGCACTT+AGG - Chr8:72095142-72095161 MsG0880046331.01.T01:CDS 50.0%
! TCAATGACGCCTTGTTCTCC+CGG + Chr8:72093523-72093542 None:intergenic 50.0%
!! CAGGAAAAGTGCTACCACTC+AGG + Chr8:72095217-72095236 None:intergenic 50.0%
ACAGTTGCGGCCATAGAAGC+TGG - Chr8:72094509-72094528 MsG0880046331.01.T01:CDS 55.0%
ACGGGAATAGTAGGCTGTGC+AGG - Chr8:72093662-72093681 MsG0880046331.01.T01:intron 55.0%
AGAGTTGTCGCACTTGCAGC+TGG - Chr8:72093082-72093101 MsG0880046331.01.T01:intron 55.0%
CGCTGCACTCCTAAATTCCC+AGG - Chr8:72092531-72092550 MsG0880046331.01.T01:three_prime_UTR 55.0%
CGGGCAAGAGGAAGGACAAA+AGG + Chr8:72094581-72094600 None:intergenic 55.0%
GAGATCATCCCGGGAGAACA+AGG - Chr8:72093511-72093530 MsG0880046331.01.T01:CDS 55.0%
GAGTGCAGCGGTTAGACTTG+AGG + Chr8:72092521-72092540 None:intergenic 55.0%
GCTTCTATGGCCGCAACTGT+TGG + Chr8:72094509-72094528 None:intergenic 55.0%
GGACGAGCAATCCCAGAACT+AGG - Chr8:72092773-72092792 MsG0880046331.01.T01:intron 55.0%
GTGCAGCGGTTAGACTTGAG+GGG + Chr8:72092519-72092538 None:intergenic 55.0%
GTTGACCTCACCTTCCCTTG+AGG - Chr8:72096974-72096993 MsG0880046331.01.T01:CDS 55.0%
TGAAAAAGGAGCCGGGCACA+CGG + Chr8:72096807-72096826 None:intergenic 55.0%
TGCAGCGGTTAGACTTGAGG+GGG + Chr8:72092518-72092537 None:intergenic 55.0%
TGTTCTCCCGGGATGATCTC+CGG + Chr8:72093511-72093530 None:intergenic 55.0%
! CAATGACGCCTTGTTCTCCC+GGG + Chr8:72093522-72093541 None:intergenic 55.0%
! GGGAGAACAAGGCGTCATTG+AGG - Chr8:72093522-72093541 MsG0880046331.01.T01:intron 55.0%
! TTCTCAGGTTGCACGTCACC+CGG - Chr8:72093622-72093641 MsG0880046331.01.T01:intron 55.0%
!! AGTTCTGGGATTGCTCGTCC+TGG + Chr8:72092773-72092792 None:intergenic 55.0%
!!! CTGCATCCGGAGGTGCTTTT+AGG - Chr8:72095178-72095197 MsG0880046331.01.T01:intron 55.0%
ATTGCTCGTCCTGGCCATGC+TGG + Chr8:72092764-72092783 None:intergenic 60.0%
CATCAGGACCACCACCAGCA+TGG - Chr8:72092747-72092766 MsG0880046331.01.T01:CDS 60.0%
CTGTCATGGTTCCTCCAGCG+CGG + Chr8:72096215-72096234 None:intergenic 60.0%
GTGCACCCTCTGTTAACCCC+TGG + Chr8:72095140-72095159 None:intergenic 60.0%
TGACACATGTGCCGTGTGCC+CGG - Chr8:72096793-72096812 MsG0880046331.01.T01:intron 60.0%
CGCGCTGGAGGAACCATGAC+AGG - Chr8:72096213-72096232 MsG0880046331.01.T01:CDS 65.0%
CGTCCTGGCCATGCTGGTGG+TGG + Chr8:72092758-72092777 None:intergenic 70.0%
GCTCGTCCTGGCCATGCTGG+TGG + Chr8:72092761-72092780 None:intergenic 70.0%
GGACCACCACCAGCATGGCC+AGG - Chr8:72092752-72092771 MsG0880046331.01.T01:intron 70.0%
TATGCTGCTGGCCGCGCTGG+AGG - Chr8:72096201-72096220 MsG0880046331.01.T01:CDS 70.0%
TCCAGCGCGGCCAGCAGCAT+AGG + Chr8:72096202-72096221 None:intergenic 70.0%
GCCTATGCTGCTGGCCGCGC+TGG - Chr8:72096198-72096217 MsG0880046331.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr8 gene 72092339 72097338 72092339 ID=MsG0880046331.01;Name=MsG0880046331.01
Chr8 mRNA 72092339 72097338 72092339 ID=MsG0880046331.01.T01;Parent=MsG0880046331.01;Name=MsG0880046331.01.T01;_AED=0.33;_eAED=0.33;_QI=123|1|1|1|1|1|12|259|475
Chr8 exon 72092339 72092766 72092339 ID=MsG0880046331.01.T01:exon:28025;Parent=MsG0880046331.01.T01
Chr8 exon 72093391 72093537 72093391 ID=MsG0880046331.01.T01:exon:28024;Parent=MsG0880046331.01.T01
Chr8 exon 72093673 72093794 72093673 ID=MsG0880046331.01.T01:exon:28023;Parent=MsG0880046331.01.T01
Chr8 exon 72093894 72093998 72093894 ID=MsG0880046331.01.T01:exon:28022;Parent=MsG0880046331.01.T01
Chr8 exon 72094080 72094191 72094080 ID=MsG0880046331.01.T01:exon:28021;Parent=MsG0880046331.01.T01
Chr8 exon 72094478 72094545 72094478 ID=MsG0880046331.01.T01:exon:28020;Parent=MsG0880046331.01.T01
Chr8 exon 72095022 72095171 72095022 ID=MsG0880046331.01.T01:exon:28019;Parent=MsG0880046331.01.T01
Chr8 exon 72095986 72096048 72095986 ID=MsG0880046331.01.T01:exon:28018;Parent=MsG0880046331.01.T01
Chr8 exon 72096134 72096259 72096134 ID=MsG0880046331.01.T01:exon:28017;Parent=MsG0880046331.01.T01
Chr8 exon 72096545 72096631 72096545 ID=MsG0880046331.01.T01:exon:28016;Parent=MsG0880046331.01.T01
Chr8 exon 72096815 72097002 72096815 ID=MsG0880046331.01.T01:exon:28015;Parent=MsG0880046331.01.T01
Chr8 exon 72097125 72097338 72097125 ID=MsG0880046331.01.T01:exon:28014;Parent=MsG0880046331.01.T01
Chr8 five_prime_UTR 72097216 72097338 72097216 ID=MsG0880046331.01.T01:five_prime_utr;Parent=MsG0880046331.01.T01
Chr8 CDS 72097125 72097215 72097125 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 CDS 72096815 72097002 72096815 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 CDS 72096545 72096631 72096545 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 CDS 72096134 72096259 72096134 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 CDS 72095986 72096048 72095986 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 CDS 72095022 72095171 72095022 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 CDS 72094478 72094545 72094478 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 CDS 72094080 72094191 72094080 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 CDS 72093894 72093998 72093894 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 CDS 72093673 72093794 72093673 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 CDS 72093391 72093537 72093391 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 CDS 72092598 72092766 72092598 ID=MsG0880046331.01.T01:cds;Parent=MsG0880046331.01.T01
Chr8 three_prime_UTR 72092339 72092597 72092339 ID=MsG0880046331.01.T01:three_prime_utr;Parent=MsG0880046331.01.T01
Gene Sequence

>MsG0880046331.01.T01

ATGGCTCTCAATTTGTCTTCTCCAGCTGAACTTAAGTCCGGTTTTTTCACTGACCCCCTCAAGTCTAACCGCTGCACTCCTAAATTCCCAGGTGGTGTTGCTTTGAAAAGAAAAGAAAATGGAACAGCATCTCGAACAAGAATTTACTGTTCAGTGCAGTCAACATCAGGACCACCACCAGCATGGCCAGGACGAGCAATCCCAGAACTAGGTAACAAGACTTGGGAAGGCCCTAAACCCATCTCTATTGTTGGATGCACTGGTTCAATTGGAACTCAGACACTAGATATTGTCGCGGAGAATCCAGATAAGTTTAGAGTTGTCGCACTTGCAGCTGGTTCGAACATTACTCTTCTGATAGATCAGGTTAAAAGATTTAAGCCACAACTTGTTGCTGTTAGAAACGAGTCTCTACTTGCTGAACTTCAAGAAGCTTTGAAAGATGTTGAACAAAAACCGGAGATCATCCCGGGAGAACAAGGCGTCATTGAGGTTGCACGTCACCCGGATGCAGTCACTGTTGTCACGGGAATAGTAGGCTGTGCAGGACTAAAGCCAACAGTTGCGGCCATAGAAGCTGGAAAAGACATAGCTTTGGCCAATAAAGAGACACTAATTGCCGGAGGTCCTTTTGTCCTTCCTCTTGCCCGAAAGCATAACGTAAAAATACTTCCTGCTGATTCCGAACATTCTGCTATTTTTCAGTGTATCCAGGGGTTAACAGAGGGTGCACTTAGGCGAGTCATTCTAACTGCATCCGGAGGTGCTTTTAGGGATTGGCCTGTTGAGAAACTGAAAGATGTTAAAGTTGCCGATGCATTAAAACATCCCAACTGGAGTATGGGGAAAAAGATAACTGTGGACTCAGCTACACTTTTTAACAAGGGTCTAGAAGTGATTGAAGCACATTACTTATTTGGAGCTGATTATGATGATATTGACATTGTCATTCATCCACAATCAATCATACATTCAATGATTGAAACACAGGATTCATCTGTTCTTGCACAATTGGGGTGGCCTGATATGCGTTTGCCAATCCTTTATACATTATCATGGCCTGACAGAGTCTATTGTTCTGAAGTCACTTGGCCTCGTCTTGATCTTTGCAAGCTTGGTTCACTTACTTTTAAAGCTCCTGACAACATTAAGTATCCATCCATGAATCTTGCCTATGCTGCTGGCCGCGCTGGAGGAACCATGACAGGTGTTCTTAGTGCAGCAAATGAGAAAGCTGTAGAGATGTTTATTGATGAAAAGATTAGCTATTTGGATATTTTCAAGGTTGTGGAGCTAACATGTCAGAAGCATCAAGATGAATTGTTGACCTCACCTTCCCTTGAGGAAATTATTCACTATGACTTGTGGGCCCGAGAATATGCTGCTAGTTTGCAAAGCTCTTCAAGCTTCACTCCTGTTCTAGCATGA

Protein sequence

>MsG0880046331.01.T01

MALNLSSPAELKSGFFTDPLKSNRCTPKFPGGVALKRKENGTASRTRIYCSVQSTSGPPPAWPGRAIPELGNKTWEGPKPISIVGCTGSIGTQTLDIVAENPDKFRVVALAAGSNITLLIDQVKRFKPQLVAVRNESLLAELQEALKDVEQKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLARKHNVKILPADSEHSAIFQCIQGLTEGALRRVILTASGGAFRDWPVEKLKDVKVADALKHPNWSMGKKITVDSATLFNKGLEVIEAHYLFGADYDDIDIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTLSWPDRVYCSEVTWPRLDLCKLGSLTFKAPDNIKYPSMNLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCQKHQDELLTSPSLEEIIHYDLWAREYAASLQSSSSFTPVLA*