AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040138.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040138.01.T02 MTR_4g036220 70.543 129 9 2 1 100 38 166 2.25e-51 167
MsG0780040138.01.T02 MTR_7g085150 63.514 148 6 2 1 100 49 196 1.21e-50 166
MsG0780040138.01.T02 MTR_7g085150 63.514 148 6 2 1 100 49 196 2.42e-50 164
MsG0780040138.01.T02 MTR_7g085180 51.701 147 23 2 2 100 29 175 6.68e-41 140
MsG0780040138.01.T02 MTR_7g085200 52.349 149 23 2 2 102 28 176 1.07e-39 137
MsG0780040138.01.T02 MTR_7g085200 51.656 151 23 2 2 102 28 178 2.15e-39 136
MsG0780040138.01.T02 MTR_7g085120 55.102 147 18 2 2 100 29 175 2.53e-39 135
MsG0780040138.01.T02 MTR_7g085090 39.583 144 39 2 5 100 55 198 2.81e-25 98.2
MsG0780040138.01.T02 MTR_6g033000 37.241 145 43 2 4 100 67 211 4.68e-21 86.7
MsG0780040138.01.T01 MTR_7g085150 90.909 88 8 0 3 90 208 295 5.09e-51 167
MsG0780040138.01.T01 MTR_7g085150 97.531 81 2 0 10 90 215 295 1.30e-50 167
MsG0780040138.01.T01 MTR_7g085150 92.453 53 3 1 84 136 427 478 1.28e-25 100
MsG0780040138.01.T01 MTR_7g085120 84.091 88 14 0 3 90 187 274 2.07e-46 156
MsG0780040138.01.T01 MTR_7g085120 79.245 53 10 1 84 136 405 456 4.21e-23 93.6
MsG0780040138.01.T01 MTR_7g085180 73.626 91 23 1 1 90 184 274 1.21e-40 140
MsG0780040138.01.T01 MTR_7g085180 69.811 53 15 1 84 136 404 455 4.04e-18 79.7
MsG0780040138.01.T01 MTR_7g085200 74.725 91 22 1 1 90 183 273 2.10e-39 137
MsG0780040138.01.T01 MTR_7g085200 76.000 50 11 1 87 136 406 454 2.49e-19 83.2
MsG0780040138.01.T01 MTR_7g085200 74.725 91 22 1 1 90 185 275 2.30e-39 137
MsG0780040138.01.T01 MTR_7g085200 76.000 50 11 1 87 136 408 456 2.51e-19 83.2
MsG0780040138.01.T01 MTR_4g036220 79.012 81 3 1 10 90 185 251 1.03e-36 130
MsG0780040138.01.T01 MTR_4g036220 90.566 53 4 1 84 136 382 433 1.83e-25 100
MsG0780040138.01.T01 MTR_7g085090 61.538 91 34 1 1 90 207 297 1.22e-31 117
MsG0780040138.01.T01 MTR_6g033000 65.432 81 28 0 10 90 230 310 2.62e-31 116
MsG0780040138.01.T01 MTR_6g033000 67.442 43 13 1 84 126 441 482 1.47e-12 63.9
MsG0780040138.01.T01 MTR_7g085160 60.377 53 12 2 84 136 176 219 3.23e-13 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040138.01.T02 AT5G18280 34.722 144 46 2 5 100 58 201 1.21e-18 79.7
MsG0780040138.01.T02 AT3G04080 34.848 132 38 2 17 100 69 200 4.45e-18 78.2
MsG0780040138.01.T01 AT5G18280 64.634 82 29 0 10 91 220 301 8.29e-32 117
MsG0780040138.01.T01 AT3G04080 61.728 81 31 0 10 90 219 299 1.08e-28 108

Find 75 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATGTTGTTTCCAAGAAAT+TGG 0.163680 7:-73534147 None:intergenic
TACATCAATCGTTCAAATTT+AGG 0.187026 7:-73539039 None:intergenic
TCTTCTCCATCTGCAACTTT+TGG 0.192928 7:-73537655 None:intergenic
GAGGAAATTGGTTCTTGTTT+TGG 0.196901 7:-73534193 None:intergenic
TACAGGCAACAGCAGGTTTA+AGG 0.201849 7:+73536366 MsG0780040138.01.T01:intron
ATTTCTTACTCCCAATTTCT+TGG 0.211260 7:+73534136 MsG0780040138.01.T01:five_prime_UTR
CATAAAGTTCATCATATTCT+TGG 0.247829 7:-73534079 None:intergenic
CCCAGAGATAAGAACCTTCT+TGG 0.271914 7:-73537076 None:intergenic
CCAAGTCTAACGGGTGTCTT+GGG 0.283716 7:-73535438 None:intergenic
CCCAAGAAGGTTCTTATCTC+TGG 0.305526 7:+73537075 MsG0780040138.01.T01:five_prime_UTR
TTGAGAATATTCATAGCTTA+TGG 0.320552 7:+73539193 MsG0780040138.01.T01:three_prime_UTR
AAATTTAGGTAACGATGATA+TGG 0.324810 7:-73539025 None:intergenic
AATATGATCTCTATGTTCAT+AGG 0.325141 7:+73537713 MsG0780040138.01.T01:CDS
ACAACAGCATAAGAGGAAAT+TGG 0.346286 7:-73534205 None:intergenic
GTCTTGGGGCGTTGGTCCTC+AGG 0.350518 7:-73535423 None:intergenic
TTAACTATGCATTGGGGAAA+TGG 0.359681 7:+73537540 MsG0780040138.01.T01:exon
TTAAGTGACTAGTTTCAAAA+TGG 0.360005 7:+73534039 MsG0780040138.01.T01:five_prime_UTR
CCCAAGTCTAACGGGTGTCT+TGG 0.360457 7:-73535439 None:intergenic
AGTACAAGCTTCTTAATGTA+TGG 0.360656 7:-73537679 None:intergenic
GATGCAGTTTCTATTATTGA+TGG 0.366866 7:+73537050 MsG0780040138.01.T01:five_prime_UTR
CATGTTGTTTCCAAGAAATT+GGG 0.378180 7:-73534146 None:intergenic
TAACTATGCATTGGGGAAAT+GGG 0.392239 7:+73537541 MsG0780040138.01.T01:exon
CCCAAGACACCCGTTAGACT+TGG 0.397116 7:+73535438 MsG0780040138.01.T01:five_prime_UTR
ATCAAACACAACAGCATAAG+AGG 0.406879 7:-73534212 None:intergenic
GTGACAGTTAACTATGCATT+GGG 0.413726 7:+73537533 MsG0780040138.01.T01:five_prime_UTR
AAACAGTGGGTAATGGATCT+TGG 0.430303 7:+73537577 MsG0780040138.01.T01:CDS
TATGCTGTTGTGTTTGATGC+TGG 0.431064 7:+73534217 MsG0780040138.01.T01:five_prime_UTR
ATCCGCGTATGCACTCAAAC+CGG 0.434433 7:-73535340 None:intergenic
AAACTAAATCTTCTTCATGT+TGG 0.458920 7:+73534278 MsG0780040138.01.T01:five_prime_UTR
ATTATTGATGGAACCCAAGA+AGG 0.464764 7:+73537062 MsG0780040138.01.T01:five_prime_UTR
CCAGAGATAAGAACCTTCTT+GGG 0.465441 7:-73537075 None:intergenic
TAACGGGTGTCTTGGGGCGT+TGG 0.467981 7:-73535431 None:intergenic
TGCATCACGTTGAACGTTGA+AGG 0.472392 7:-73537033 None:intergenic
CCAGCTAAAATGCAAGGGTT+AGG 0.472739 7:-73537881 None:intergenic
GTGGAAGCTGCATGGCCTCT+AGG 0.485627 7:+73538988 MsG0780040138.01.T01:CDS
TGGAGGTGGATCGGTTCAAA+TGG 0.485873 7:+73537597 MsG0780040138.01.T01:CDS
TGTCTTGGCCCAAGTCTAAC+GGG 0.490389 7:-73535447 None:intergenic
CTTTCTGCCTGCTCTAAAAG+TGG 0.495493 7:-73535393 None:intergenic
CTTTGGTAGAGAAGCATCTC+GGG 0.495672 7:+73537829 MsG0780040138.01.T01:CDS
GTGTCTTGGCCCAAGTCTAA+CGG 0.498163 7:-73535448 None:intergenic
CATAAACAAAACAAGCTCAA+TGG 0.510507 7:-73539157 None:intergenic
CCCGCTGTAATCTCTTGCAA+TGG 0.520889 7:-73538937 None:intergenic
GGTGACAGTTAACTATGCAT+TGG 0.523428 7:+73537532 MsG0780040138.01.T01:intron
CATTAAGAAGCTTGTACTCA+AGG 0.525184 7:+73537684 MsG0780040138.01.T01:CDS
TCTTCCAGTTACTTACACTT+TGG 0.525363 7:+73537812 MsG0780040138.01.T01:intron
CCAAGAAGGTTCTTATCTCT+GGG 0.530679 7:+73537076 MsG0780040138.01.T01:five_prime_UTR
AATGGATCTTGGAGGTGGAT+CGG 0.533644 7:+73537588 MsG0780040138.01.T01:CDS
TCCGCGTATGCACTCAAACC+GGG 0.534325 7:-73535339 None:intergenic
AATTGGGAGTAAGAAATTGA+AGG 0.537695 7:-73534130 None:intergenic
ATATTTATACAGGCAACAGC+AGG 0.548001 7:+73536359 MsG0780040138.01.T01:intron
ACTTTGGTAGAGAAGCATCT+CGG 0.551865 7:+73537828 MsG0780040138.01.T01:CDS
TCAAATCCAGCTAAAATGCA+AGG 0.555070 7:-73537887 None:intergenic
TGGGTAATGGATCTTGGAGG+TGG 0.558456 7:+73537583 MsG0780040138.01.T01:CDS
TGAATATCAAGATTCTCTTG+TGG 0.566345 7:+73538969 MsG0780040138.01.T01:CDS
CCAAGACACCCGTTAGACTT+GGG 0.570046 7:+73535439 MsG0780040138.01.T01:five_prime_UTR
AATGCTCCAAAAGTTGCAGA+TGG 0.572535 7:+73537649 MsG0780040138.01.T01:CDS
TTTGATCAAAATGGTAAACA+TGG 0.580756 7:-73534257 None:intergenic
ATTAAGAAGCTTGTACTCAA+GGG 0.588255 7:+73537685 MsG0780040138.01.T01:CDS
AACTATGCATTGGGGAAATG+GGG 0.588385 7:+73537542 MsG0780040138.01.T01:exon
TTTAGAGCAGGCAGAAAGTG+TGG 0.588867 7:+73535398 MsG0780040138.01.T01:five_prime_UTR
GGCAGAAAGTGTGGTTCCTG+AGG 0.596755 7:+73535407 MsG0780040138.01.T01:five_prime_UTR
ATTCTCTTGTGGAAGCTGCA+TGG 0.602647 7:+73538980 MsG0780040138.01.T01:CDS
CTTAAACTCTACTAGTGTAG+AGG 0.605861 7:-73534021 None:intergenic
CAGTGGGTAATGGATCTTGG+AGG 0.608164 7:+73537580 MsG0780040138.01.T01:CDS
CCATTGCAAGAGATTACAGC+GGG 0.615493 7:+73538937 MsG0780040138.01.T01:CDS
CAAAATGGTAAACATGGACA+CGG 0.617625 7:-73534251 None:intergenic
CAAGTCTAACGGGTGTCTTG+GGG 0.617817 7:-73535437 None:intergenic
CAAATCCAGCTAAAATGCAA+GGG 0.619736 7:-73537886 None:intergenic
AAATGGCATATGCAGTGTCA+AGG 0.621886 7:+73537614 MsG0780040138.01.T01:CDS
TGTGTTTGATGCTGGTAGCA+CGG 0.628681 7:+73534225 MsG0780040138.01.T01:five_prime_UTR
ACCCGGTTTGAGTGCATACG+CGG 0.634041 7:+73535338 MsG0780040138.01.T01:five_prime_UTR
CTAGTGTAGAGGAATTGAAG+TGG 0.668457 7:-73534010 None:intergenic
GCTTCTACAGCATTTCCTAG+AGG 0.686619 7:-73539003 None:intergenic
TCCATTGCAAGAGATTACAG+CGG 0.727640 7:+73538936 MsG0780040138.01.T01:CDS
TGACAGTTAACTATGCATTG+GGG 0.729371 7:+73537534 MsG0780040138.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAAATAAAATTAATA+AGG - Chr7:73534513-73534532 None:intergenic 0.0%
!! AAAATTAATAAGGTTAAAAT+TGG - Chr7:73534503-73534522 None:intergenic 10.0%
!! AAATAACAAAATTAAACTTA+TGG - Chr7:73536434-73536453 None:intergenic 10.0%
!! TAAATATAAAATGACATAAA+TGG - Chr7:73534901-73534920 None:intergenic 10.0%
!! TATGCATTTAAAAAAAATAA+TGG + Chr7:73535096-73535115 MsG0780040138.01.T01:intron 10.0%
!!! AAATTTTCATAATTTTTTCT+AGG - Chr7:73536751-73536770 None:intergenic 10.0%
!!! AATAATTGATTTTATTTGTT+TGG + Chr7:73538903-73538922 MsG0780040138.01.T01:intron 10.0%
!!! AATTTTCATAATTTTTTCTA+GGG - Chr7:73536750-73536769 None:intergenic 10.0%
!!! AGTTTTTTATTTTTAAAACT+CGG - Chr7:73538056-73538075 None:intergenic 10.0%
!!! TTTTTAAAGATATAAAAAGT+GGG - Chr7:73534576-73534595 None:intergenic 10.0%
!!! TTTTTTAAAGATATAAAAAG+TGG - Chr7:73534577-73534596 None:intergenic 10.0%
!! AGTTATTATATATAGACAAA+AGG + Chr7:73534353-73534372 MsG0780040138.01.T01:intron 15.0%
!! ATAAAAAAACATTTATCACT+TGG + Chr7:73534777-73534796 MsG0780040138.01.T01:intron 15.0%
!! ATCTAAATTTAAGAATGATT+AGG + Chr7:73535919-73535938 MsG0780040138.01.T01:intron 15.0%
!! CTTATTAAAAATAATGTGTT+TGG - Chr7:73534949-73534968 None:intergenic 15.0%
!! TAAAAATAGCGAAATTAAAA+AGG - Chr7:73538260-73538279 None:intergenic 15.0%
!! TCTACTTATTACATATTTAA+CGG - Chr7:73537478-73537497 None:intergenic 15.0%
!! TGAATAATATGTTAGAAAAA+GGG + Chr7:73536532-73536551 MsG0780040138.01.T01:intron 15.0%
!! TTATAATTCATGTAACTTAA+AGG + Chr7:73536087-73536106 MsG0780040138.01.T01:intron 15.0%
!! TTGAATAATATGTTAGAAAA+AGG + Chr7:73536531-73536550 MsG0780040138.01.T01:intron 15.0%
!!! AAAATTGCAAATTTTCAAAT+GGG + Chr7:73536871-73536890 MsG0780040138.01.T01:intron 15.0%
!!! AAATGTCAAAAATTTCTTTT+TGG + Chr7:73537395-73537414 MsG0780040138.01.T01:intron 15.0%
!!! AATATTTTTAGAAAGGAAAA+TGG + Chr7:73537341-73537360 MsG0780040138.01.T01:intron 15.0%
!!! ACAAATATTTTGTTTTTCAA+AGG + Chr7:73538132-73538151 MsG0780040138.01.T01:intron 15.0%
!!! ATAATTTTGCAATTACTTTT+TGG + Chr7:73535860-73535879 MsG0780040138.01.T01:intron 15.0%
!!! ATTTAGGATATAAAGAAAAA+CGG - Chr7:73535787-73535806 None:intergenic 15.0%
!!! CAAATATTTTGTTTTTCAAA+GGG + Chr7:73538133-73538152 MsG0780040138.01.T01:intron 15.0%
!!! TAAAATATTTGAATTTTCGT+AGG + Chr7:73539222-73539241 MsG0780040138.01.T01:three_prime_UTR 15.0%
!!! TACAACAAATATTTTTAGAA+AGG + Chr7:73537334-73537353 MsG0780040138.01.T01:intron 15.0%
!!! TAGTTTAAAACAAATTACAA+AGG - Chr7:73538862-73538881 None:intergenic 15.0%
!!! TCATATAAGAATTTTATTTG+TGG + Chr7:73537145-73537164 MsG0780040138.01.T01:intron 15.0%
!! AAACGAACAAAGAAAATATA+TGG - Chr7:73534646-73534665 None:intergenic 20.0%
!! AAATATAGTCAAAGTAAGTT+AGG + Chr7:73536846-73536865 MsG0780040138.01.T01:intron 20.0%
!! AAATGCAAAAAGATAGTTTA+CGG + Chr7:73538218-73538237 MsG0780040138.01.T01:intron 20.0%
!! AAGAAACATTATCATGATAT+CGG - Chr7:73536302-73536321 None:intergenic 20.0%
!! AAGAGAATTATTACCATAAA+AGG - Chr7:73536671-73536690 None:intergenic 20.0%
!! AATTAAGCTTAATTAAAGCA+TGG - Chr7:73536960-73536979 None:intergenic 20.0%
!! AATTTAATTACCTTAGGTAA+GGG + Chr7:73536989-73537008 MsG0780040138.01.T01:intron 20.0%
!! AGTAAAACATAGTCTTTAAT+AGG + Chr7:73535257-73535276 MsG0780040138.01.T01:intron 20.0%
!! ATATATATATGAAGAACTAG+TGG - Chr7:73537748-73537767 None:intergenic 20.0%
!! CAATCGAAAATAATAAACAA+CGG - Chr7:73538621-73538640 None:intergenic 20.0%
!! GAAAATAGTTATGAACATTT+AGG - Chr7:73535803-73535822 None:intergenic 20.0%
!! GAATAATATGTTAGAAAAAG+GGG + Chr7:73536533-73536552 MsG0780040138.01.T01:intron 20.0%
!! GGAAATTATATAGTAGTTAA+TGG + Chr7:73536602-73536621 MsG0780040138.01.T01:intron 20.0%
!! TATATATATGAAGAACTAGT+GGG - Chr7:73537747-73537766 None:intergenic 20.0%
!! TTAAGAGCTCTTAATATATT+AGG - Chr7:73537786-73537805 None:intergenic 20.0%
!! TTGTAACCAAATATTTATAC+AGG + Chr7:73536349-73536368 MsG0780040138.01.T01:intron 20.0%
!!! ACAGTGTTAATTTAAGTTTT+TGG + Chr7:73535976-73535995 MsG0780040138.01.T01:intron 20.0%
!!! AGATTTAGTTTTGATCAAAA+TGG - Chr7:73534269-73534288 None:intergenic 20.0%
!!! ATCTTTTGCATTTTTAAAAC+TGG - Chr7:73538367-73538386 None:intergenic 20.0%
!!! ATGGTAATAATTCTCTTTTA+TGG + Chr7:73536674-73536693 MsG0780040138.01.T01:intron 20.0%
!!! CAAAATTGCAAATTTTCAAA+TGG + Chr7:73536870-73536889 MsG0780040138.01.T01:intron 20.0%
!!! CAGTGTTAATTTAAGTTTTT+GGG + Chr7:73535977-73535996 MsG0780040138.01.T01:intron 20.0%
!!! TCTTTTTGCATTTTTAAAAC+TGG - Chr7:73538211-73538230 None:intergenic 20.0%
!!! TGATGTTGAGTTTTATAATA+AGG + Chr7:73534304-73534323 MsG0780040138.01.T01:five_prime_UTR 20.0%
!!! TTTATTATTTTCGATTGGTT+TGG + Chr7:73538624-73538643 MsG0780040138.01.T01:intron 20.0%
! AAAAATAGCGCGAATTAAAA+AGG - Chr7:73538102-73538121 None:intergenic 25.0%
! AAACTAAATCTTCTTCATGT+TGG + Chr7:73534278-73534297 MsG0780040138.01.T01:five_prime_UTR 25.0%
! AAATTTAGGTAACGATGATA+TGG - Chr7:73539028-73539047 None:intergenic 25.0%
! AAGAAAGTCAAATCTTGAAT+AGG - Chr7:73537210-73537229 None:intergenic 25.0%
! AATAAACAACGGAATTAGAA+TGG - Chr7:73538610-73538629 None:intergenic 25.0%
! AATATGATCTCTATGTTCAT+AGG + Chr7:73537713-73537732 MsG0780040138.01.T01:CDS 25.0%
! ACAAAATATGGTGAAGTTAA+AGG - Chr7:73535311-73535330 None:intergenic 25.0%
! AGAGAAAAATTCACTTTATG+TGG - Chr7:73535571-73535590 None:intergenic 25.0%
! ATAATCGCAAACTAACTATT+TGG - Chr7:73535079-73535098 None:intergenic 25.0%
! CAATTTAATTACCTTAGGTA+AGG + Chr7:73536988-73537007 MsG0780040138.01.T01:intron 25.0%
! CATAAAGTTCATCATATTCT+TGG - Chr7:73534082-73534101 None:intergenic 25.0%
! CTTACCTAAGGTAATTAAAT+TGG - Chr7:73536990-73537009 None:intergenic 25.0%
! GAAAAATTCACAAAAACAGT+GGG + Chr7:73537564-73537583 MsG0780040138.01.T01:CDS 25.0%
! GAAAGCAAGTTAAAAGAAAA+AGG - Chr7:73534670-73534689 None:intergenic 25.0%
! GAGAAAAATTCACTTTATGT+GGG - Chr7:73535570-73535589 None:intergenic 25.0%
! TACATCAATCGTTCAAATTT+AGG - Chr7:73539042-73539061 None:intergenic 25.0%
! TATAGTAGAATATGTTTGCA+TGG + Chr7:73538771-73538790 MsG0780040138.01.T01:intron 25.0%
! TTGAAACTTGTCATCTTTAT+AGG + Chr7:73537511-73537530 MsG0780040138.01.T01:intron 25.0%
! TTGAGAATATTCATAGCTTA+TGG + Chr7:73539193-73539212 MsG0780040138.01.T01:three_prime_UTR 25.0%
! TTTGATCAAAATGGTAAACA+TGG - Chr7:73534260-73534279 None:intergenic 25.0%
!! AAAAGAAACTACCAACTTTT+TGG + Chr7:73534596-73534615 MsG0780040138.01.T01:intron 25.0%
!! CGTTGTTTATTATTTTCGAT+TGG + Chr7:73538619-73538638 MsG0780040138.01.T01:intron 25.0%
!! TCAAAAACAGTTTCCTTTTA+TGG + Chr7:73536655-73536674 MsG0780040138.01.T01:intron 25.0%
!! TTAAAGCCAAATACCATTTT+TGG - Chr7:73536114-73536133 None:intergenic 25.0%
!! TTTGTTATGTCTGTTTGAAT+AGG + Chr7:73537170-73537189 MsG0780040138.01.T01:intron 25.0%
!!! AAAGTGATAAGAGAAGTATT+GGG + Chr7:73536171-73536190 MsG0780040138.01.T01:intron 25.0%
!!! AAGTTTCTATTGCTATTTAG+CGG - Chr7:73536275-73536294 None:intergenic 25.0%
!!! AATTTGTTGAGTTAATGAAC+AGG + Chr7:73536323-73536342 MsG0780040138.01.T01:intron 25.0%
!!! ATTGATTTTATTTGTTTGGC+AGG + Chr7:73538907-73538926 MsG0780040138.01.T01:intron 25.0%
!!! TGTTAATTTAAGTTTTTGGG+TGG + Chr7:73535980-73535999 MsG0780040138.01.T01:intron 25.0%
!!! TTAAGTGACTAGTTTCAAAA+TGG + Chr7:73534039-73534058 MsG0780040138.01.T01:five_prime_UTR 25.0%
AAAGGACCAAAAATGGTATT+TGG + Chr7:73536105-73536124 MsG0780040138.01.T01:intron 30.0%
AATTAGTCGAGGTTAAATGA+TGG - Chr7:73535542-73535561 None:intergenic 30.0%
AATTGGGAGTAAGAAATTGA+AGG - Chr7:73534133-73534152 None:intergenic 30.0%
ACATTAATAACCACCTACAA+TGG + Chr7:73536141-73536160 MsG0780040138.01.T01:intron 30.0%
AGAACATACACACACATATA+TGG + Chr7:73537309-73537328 MsG0780040138.01.T01:intron 30.0%
AGCTTGTACATTAAATCTTG+AGG + Chr7:73538711-73538730 MsG0780040138.01.T01:intron 30.0%
AGTACAAGCTTCTTAATGTA+TGG - Chr7:73537682-73537701 None:intergenic 30.0%
ATATGCTGGAGAAGAATTTA+AGG + Chr7:73538164-73538183 MsG0780040138.01.T01:intron 30.0%
ATATTGAAATCCACAAGAAG+TGG - Chr7:73538754-73538773 None:intergenic 30.0%
ATTAAGAAGCTTGTACTCAA+GGG + Chr7:73537685-73537704 MsG0780040138.01.T01:CDS 30.0%
ATTAGTCGAGGTTAAATGAT+GGG - Chr7:73535541-73535560 None:intergenic 30.0%
ATTTCTTACTCCCAATTTCT+TGG + Chr7:73534136-73534155 MsG0780040138.01.T01:five_prime_UTR 30.0%
CAAACAATTCTTCACTTCAA+TGG + Chr7:73535160-73535179 MsG0780040138.01.T01:intron 30.0%
CAATAGATTGATCACGATAA+AGG - Chr7:73535668-73535687 None:intergenic 30.0%
CAATTCCTAACTCTTACATA+TGG - Chr7:73535610-73535629 None:intergenic 30.0%
CATAAACAAAACAAGCTCAA+TGG - Chr7:73539160-73539179 None:intergenic 30.0%
CTGTTGCCTGTATAAATATT+TGG - Chr7:73536358-73536377 None:intergenic 30.0%
GATGCAGTTTCTATTATTGA+TGG + Chr7:73537050-73537069 MsG0780040138.01.T01:five_prime_UTR 30.0%
GGAAAAATTCACAAAAACAG+TGG + Chr7:73537563-73537582 MsG0780040138.01.T01:CDS 30.0%
GGGTAGTTACATATGAATAT+GGG - Chr7:73534556-73534575 None:intergenic 30.0%
GTAACTTAAAGGACCAAAAA+TGG + Chr7:73536098-73536117 MsG0780040138.01.T01:intron 30.0%
TAATGGTATCATTAGCTGTT+AGG + Chr7:73536926-73536945 MsG0780040138.01.T01:intron 30.0%
TAATTTCCGTCGAAAATTTG+TGG - Chr7:73536248-73536267 None:intergenic 30.0%
TATCGTGATCAATCTATTGT+TGG + Chr7:73535669-73535688 MsG0780040138.01.T01:intron 30.0%
TGAATATCAAGATTCTCTTG+TGG + Chr7:73538969-73538988 MsG0780040138.01.T01:CDS 30.0%
TGAGACTATAAGGTGTATTT+GGG - Chr7:73538654-73538673 None:intergenic 30.0%
TGCGAATTTATGCATCTATT+AGG + Chr7:73535952-73535971 MsG0780040138.01.T01:intron 30.0%
TGCTCCAATTTAATTACCTT+AGG + Chr7:73536983-73537002 MsG0780040138.01.T01:intron 30.0%
TGGGTAGTTACATATGAATA+TGG - Chr7:73534557-73534576 None:intergenic 30.0%
TTGTACATTAAATCTTGAGG+AGG + Chr7:73538714-73538733 MsG0780040138.01.T01:intron 30.0%
TTTCTCCATATGTAAGAGTT+AGG + Chr7:73535602-73535621 MsG0780040138.01.T01:intron 30.0%
! AGGTGACAATAACATCTTTT+TGG + Chr7:73534324-73534343 MsG0780040138.01.T01:intron 30.0%
! ATGCATTGACATGCATAATA+GGG - Chr7:73536492-73536511 None:intergenic 30.0%
! CAAAGTGATAAGAGAAGTAT+TGG + Chr7:73536170-73536189 MsG0780040138.01.T01:intron 30.0%
! CTTCTGAAAAATACTGCAAT+CGG + Chr7:73536405-73536424 MsG0780040138.01.T01:five_prime_UTR 30.0%
! TATGCATTGACATGCATAAT+AGG - Chr7:73536493-73536512 None:intergenic 30.0%
!! AAGAAGTGGATAAGTTGATT+TGG - Chr7:73538740-73538759 None:intergenic 30.0%
!! ACATGTTGTTTCCAAGAAAT+TGG - Chr7:73534150-73534169 None:intergenic 30.0%
!! CATGTTGTTTCCAAGAAATT+GGG - Chr7:73534149-73534168 None:intergenic 30.0%
!! GTTTCAAAATGGTTTTGCTT+TGG + Chr7:73534050-73534069 MsG0780040138.01.T01:five_prime_UTR 30.0%
!!! AGGAAATTGGTTCTTGTTTT+GGG - Chr7:73534195-73534214 None:intergenic 30.0%
!!! CTTGTTTTGGGAATATCTTA+CGG - Chr7:73534183-73534202 None:intergenic 30.0%
AAAACTTACCCCAAGTCTAA+CGG - Chr7:73535474-73535493 None:intergenic 35.0%
AATGCAAAAGATAGTTCGTC+AGG + Chr7:73538375-73538394 MsG0780040138.01.T01:intron 35.0%
AATTTGTGGAGTATGCAATG+TGG - Chr7:73536234-73536253 None:intergenic 35.0%
ACAACAGCATAAGAGGAAAT+TGG - Chr7:73534208-73534227 None:intergenic 35.0%
ACTGGTTAAGGATATGGAAA+AGG + Chr7:73536581-73536600 MsG0780040138.01.T01:intron 35.0%
ATATTTATACAGGCAACAGC+AGG + Chr7:73536359-73536378 MsG0780040138.01.T01:intron 35.0%
ATCAAACACAACAGCATAAG+AGG - Chr7:73534215-73534234 None:intergenic 35.0%
ATCAACTTATCCACTTCTTG+TGG + Chr7:73538741-73538760 MsG0780040138.01.T01:intron 35.0%
ATTATTGATGGAACCCAAGA+AGG + Chr7:73537062-73537081 MsG0780040138.01.T01:five_prime_UTR 35.0%
CAAAATGGTAAACATGGACA+CGG - Chr7:73534254-73534273 None:intergenic 35.0%
CAAATCCAGCTAAAATGCAA+GGG - Chr7:73537889-73537908 None:intergenic 35.0%
CACTTTGATCAATCCATTGT+AGG - Chr7:73536157-73536176 None:intergenic 35.0%
CATATGCTGGAGAAGAATTA+AGG + Chr7:73538320-73538339 MsG0780040138.01.T01:intron 35.0%
CATTAAGAAGCTTGTACTCA+AGG + Chr7:73537684-73537703 MsG0780040138.01.T01:CDS 35.0%
CTTAAACTCTACTAGTGTAG+AGG - Chr7:73534024-73534043 None:intergenic 35.0%
GGAATTAGAATGGCTTAATG+TGG - Chr7:73538600-73538619 None:intergenic 35.0%
GGATGAAAACATGATGTGTT+TGG + Chr7:73534387-73534406 MsG0780040138.01.T01:intron 35.0%
GTCAACTGGTCATGTATTAT+GGG - Chr7:73536470-73536489 None:intergenic 35.0%
GTGACAGTTAACTATGCATT+GGG + Chr7:73537533-73537552 MsG0780040138.01.T01:five_prime_UTR 35.0%
GTGAGACTATAAGGTGTATT+TGG - Chr7:73538655-73538674 None:intergenic 35.0%
TAACTATGCATTGGGGAAAT+GGG + Chr7:73537541-73537560 MsG0780040138.01.T01:exon 35.0%
TAATGCATACATCTTCAGCT+AGG - Chr7:73538508-73538527 None:intergenic 35.0%
TCAAATCCAGCTAAAATGCA+AGG - Chr7:73537890-73537909 None:intergenic 35.0%
TCATTAGCTGTTAGGTCTAT+AGG + Chr7:73536934-73536953 MsG0780040138.01.T01:intron 35.0%
TCTACCAAAGTGTAAGTAAC+TGG - Chr7:73537819-73537838 None:intergenic 35.0%
TCTTCCAGTTACTTACACTT+TGG + Chr7:73537812-73537831 MsG0780040138.01.T01:intron 35.0%
TGACAGTTAACTATGCATTG+GGG + Chr7:73537534-73537553 MsG0780040138.01.T01:five_prime_UTR 35.0%
TGTGGGTAAAAAATTAGTCG+AGG - Chr7:73535553-73535572 None:intergenic 35.0%
TTAACTATGCATTGGGGAAA+TGG + Chr7:73537540-73537559 MsG0780040138.01.T01:exon 35.0%
TTAGTCGAGGTTAAATGATG+GGG - Chr7:73535540-73535559 None:intergenic 35.0%
TTCAAATGGGTCATCTATTG+CGG + Chr7:73536884-73536903 MsG0780040138.01.T01:intron 35.0%
TTCACAAAAACAGTGGGTAA+TGG + Chr7:73537570-73537589 MsG0780040138.01.T01:CDS 35.0%
TTTGATCAATCCATTGTAGG+TGG - Chr7:73536154-73536173 None:intergenic 35.0%
! AAAGATTTTGCAGCTTCTTC+TGG - Chr7:73535369-73535388 None:intergenic 35.0%
! ATTGCACTTTTGGTGGAATT+TGG + Chr7:73538430-73538449 MsG0780040138.01.T01:intron 35.0%
! CATACTCCACAAATTTTCGA+CGG + Chr7:73536239-73536258 MsG0780040138.01.T01:intron 35.0%
! CATATTTTGTAGACTACACC+CGG + Chr7:73535321-73535340 MsG0780040138.01.T01:intron 35.0%
! CCAAAAGTGCAATTCTGATA+AGG - Chr7:73538423-73538442 None:intergenic 35.0%
! CCTTATCAGAATTGCACTTT+TGG + Chr7:73538420-73538439 MsG0780040138.01.T01:intron 35.0%
! TATCAGAATTGCACTTTTGG+TGG + Chr7:73538423-73538442 MsG0780040138.01.T01:intron 35.0%
!! ACTAACTATTTGGCTCTGTT+TGG - Chr7:73535069-73535088 None:intergenic 35.0%
!! AGGTTTAAGGCTTTTGAATG+GGG + Chr7:73536379-73536398 MsG0780040138.01.T01:five_prime_UTR 35.0%
!! CAGGTTTAAGGCTTTTGAAT+GGG + Chr7:73536378-73536397 MsG0780040138.01.T01:five_prime_UTR 35.0%
!! GAGGAAATTGGTTCTTGTTT+TGG - Chr7:73534196-73534215 None:intergenic 35.0%
!!! TGCATTTTAGCTGGATTTGA+TGG + Chr7:73537890-73537909 MsG0780040138.01.T01:CDS 35.0%
!!! TGTCTCTACTTTTTTGTCCA+CGG - Chr7:73535734-73535753 None:intergenic 35.0%
!!! TTTGATTCCACTTTTAGAGC+AGG + Chr7:73535386-73535405 MsG0780040138.01.T01:five_prime_UTR 35.0%
AAACTTACCCCAAGTCTAAC+GGG - Chr7:73535473-73535492 None:intergenic 40.0%
AAAGGGACATACACATATGC+TGG + Chr7:73538150-73538169 MsG0780040138.01.T01:intron 40.0%
AAATGGCATATGCAGTGTCA+AGG + Chr7:73537614-73537633 MsG0780040138.01.T01:CDS 40.0%
AACTATGCATTGGGGAAATG+GGG + Chr7:73537542-73537561 MsG0780040138.01.T01:exon 40.0%
AATGCTCCAAAAGTTGCAGA+TGG + Chr7:73537649-73537668 MsG0780040138.01.T01:CDS 40.0%
ACATGCATAATAGGGTCAAC+TGG - Chr7:73536484-73536503 None:intergenic 40.0%
ATATGGTAGTAACGTGCAAG+TGG - Chr7:73534629-73534648 None:intergenic 40.0%
CCAAGAAGGTTCTTATCTCT+GGG + Chr7:73537076-73537095 MsG0780040138.01.T01:five_prime_UTR 40.0%
CCAGAGATAAGAACCTTCTT+GGG - Chr7:73537078-73537097 None:intergenic 40.0%
CCTTGTAAAAGATTGAACCG+TGG + Chr7:73535714-73535733 MsG0780040138.01.T01:intron 40.0%
CGGGTGTAGTCTACAAAATA+TGG - Chr7:73535323-73535342 None:intergenic 40.0%
CTAGTGTAGAGGAATTGAAG+TGG - Chr7:73534013-73534032 None:intergenic 40.0%
CTGAACAAATCCCTTACCTA+AGG - Chr7:73537002-73537021 None:intergenic 40.0%
GGTCAACTGGTCATGTATTA+TGG - Chr7:73536471-73536490 None:intergenic 40.0%
GGTGACAGTTAACTATGCAT+TGG + Chr7:73537532-73537551 MsG0780040138.01.T01:intron 40.0%
GTGCAATTCTGATAAGGACA+TGG - Chr7:73538417-73538436 None:intergenic 40.0%
TATGCTGTTGTGTTTGATGC+TGG + Chr7:73534217-73534236 MsG0780040138.01.T01:five_prime_UTR 40.0%
TCAAATGGGTCATCTATTGC+GGG + Chr7:73536885-73536904 MsG0780040138.01.T01:intron 40.0%
TCCATTGCAAGAGATTACAG+CGG + Chr7:73538936-73538955 MsG0780040138.01.T01:CDS 40.0%
TGTGTATGTGTACGCATGTA+TGG - Chr7:73537265-73537284 None:intergenic 40.0%
! ACTTTTGGTGGAATTTGGAG+TGG + Chr7:73538435-73538454 MsG0780040138.01.T01:intron 40.0%
! CCACGGTTCAATCTTTTACA+AGG - Chr7:73535717-73535736 None:intergenic 40.0%
! TCTTCTCCATCTGCAACTTT+TGG - Chr7:73537658-73537677 None:intergenic 40.0%
!! AAACAGTGGGTAATGGATCT+TGG + Chr7:73537577-73537596 MsG0780040138.01.T01:CDS 40.0%
!! ACTTTGGTAGAGAAGCATCT+CGG + Chr7:73537828-73537847 MsG0780040138.01.T01:CDS 40.0%
!! GCAGGTTTAAGGCTTTTGAA+TGG + Chr7:73536377-73536396 MsG0780040138.01.T01:five_prime_UTR 40.0%
AATGGATCTTGGAGGTGGAT+CGG + Chr7:73537588-73537607 MsG0780040138.01.T01:CDS 45.0%
AGACAAAAGGCTGTGCTTGT+TGG + Chr7:73534366-73534385 MsG0780040138.01.T01:intron 45.0%
ATTCTCTTGTGGAAGCTGCA+TGG + Chr7:73538980-73538999 MsG0780040138.01.T01:CDS 45.0%
CAAGCATCTGTTTAGCGGTT+TGG + Chr7:73536199-73536218 MsG0780040138.01.T01:intron 45.0%
CCACACAAGCATCTGTTTAG+CGG + Chr7:73536194-73536213 MsG0780040138.01.T01:intron 45.0%
CCAGCTAAAATGCAAGGGTT+AGG - Chr7:73537884-73537903 None:intergenic 45.0%
CCATTGCAAGAGATTACAGC+GGG + Chr7:73538937-73538956 MsG0780040138.01.T01:CDS 45.0%
CCCAAGAAGGTTCTTATCTC+TGG + Chr7:73537075-73537094 MsG0780040138.01.T01:five_prime_UTR 45.0%
CCCAGAGATAAGAACCTTCT+TGG - Chr7:73537079-73537098 None:intergenic 45.0%
CGGAGGGAGTAGTTCAATAA+TGG + Chr7:73536909-73536928 MsG0780040138.01.T01:intron 45.0%
GCTTCTACAGCATTTCCTAG+AGG - Chr7:73539006-73539025 None:intergenic 45.0%
GGACGAAGTGTGAGACTATA+AGG - Chr7:73538664-73538683 None:intergenic 45.0%
GGTCATGTATTATGGGACGA+GGG - Chr7:73536463-73536482 None:intergenic 45.0%
TACAGGCAACAGCAGGTTTA+AGG + Chr7:73536366-73536385 MsG0780040138.01.T01:intron 45.0%
TCGGTATCTGACCTAACGAT+CGG - Chr7:73538037-73538056 None:intergenic 45.0%
TCTTGGTTTAGCCGATCGTT+AGG + Chr7:73538023-73538042 MsG0780040138.01.T01:intron 45.0%
TGCATCACGTTGAACGTTGA+AGG - Chr7:73537036-73537055 None:intergenic 45.0%
TGGTCATGTATTATGGGACG+AGG - Chr7:73536464-73536483 None:intergenic 45.0%
TGTACGCATGTATGGATCGA+TGG - Chr7:73537257-73537276 None:intergenic 45.0%
TGTGTTTGATGCTGGTAGCA+CGG + Chr7:73534225-73534244 MsG0780040138.01.T01:five_prime_UTR 45.0%
! ATCTCGGGCAGAGATTTTGA+AGG + Chr7:73537844-73537863 MsG0780040138.01.T01:CDS 45.0%
! GTGGCTTTGCACCAAAAAGT+TGG - Chr7:73534610-73534629 None:intergenic 45.0%
! TAAAACTGGCTCCAGAAGCA+GGG - Chr7:73538197-73538216 None:intergenic 45.0%
! TTAAAACTGGCTCCAGAAGC+AGG - Chr7:73538198-73538217 None:intergenic 45.0%
! TTTAGAGCAGGCAGAAAGTG+TGG + Chr7:73535398-73535417 MsG0780040138.01.T01:five_prime_UTR 45.0%
! TTTGGTGGAATTTGGAGTGG+TGG + Chr7:73538438-73538457 MsG0780040138.01.T01:intron 45.0%
!! CCTAACCCTTGCATTTTAGC+TGG + Chr7:73537881-73537900 MsG0780040138.01.T01:CDS 45.0%
!! CTTTCTGCCTGCTCTAAAAG+TGG - Chr7:73535396-73535415 None:intergenic 45.0%
!! CTTTGGTAGAGAAGCATCTC+GGG + Chr7:73537829-73537848 MsG0780040138.01.T01:CDS 45.0%
!! GTGTTGCTCGTTGATGGATT+TGG + Chr7:73538811-73538830 MsG0780040138.01.T01:intron 45.0%
!!! TTTTCTAGGGTCCTGCTAAC+TGG - Chr7:73536737-73536756 None:intergenic 45.0%
!! TTAAAAATAAAAAACTAATA+CGG + Chr7:73538060-73538079 MsG0780040138.01.T01:intron 5.0%
!!! AATTTTTTATTTAACTAAAA+TGG - Chr7:73534747-73534766 None:intergenic 5.0%
AAATGTTAACCGATGCCCCG+GGG + Chr7:73536556-73536575 MsG0780040138.01.T01:intron 50.0%
ATATCCTTAACCAGTGCCCC+CGG - Chr7:73536576-73536595 None:intergenic 50.0%
ATCCGCGTATGCACTCAAAC+CGG - Chr7:73535343-73535362 None:intergenic 50.0%
ATGGGTCATCTATTGCGGGA+CGG + Chr7:73536889-73536908 MsG0780040138.01.T01:intron 50.0%
CAAGACACCCGTTAGACTTG+GGG + Chr7:73535440-73535459 MsG0780040138.01.T01:five_prime_UTR 50.0%
CCAAGACACCCGTTAGACTT+GGG + Chr7:73535439-73535458 MsG0780040138.01.T01:five_prime_UTR 50.0%
CCCGCTGTAATCTCTTGCAA+TGG - Chr7:73538940-73538959 None:intergenic 50.0%
CCGCTAAACAGATGCTTGTG+TGG - Chr7:73536197-73536216 None:intergenic 50.0%
GAAATGTTAACCGATGCCCC+GGG + Chr7:73536555-73536574 MsG0780040138.01.T01:intron 50.0%
GCTTCAGTCTCAAGATCCAC+AGG - Chr7:73538685-73538704 None:intergenic 50.0%
GGAAATGTTAACCGATGCCC+CGG + Chr7:73536554-73536573 MsG0780040138.01.T01:intron 50.0%
GGTATGCTTAACCAGTGCTC+CGG + Chr7:73536695-73536714 MsG0780040138.01.T01:intron 50.0%
GTATGCTTAACCAGTGCTCC+GGG + Chr7:73536696-73536715 MsG0780040138.01.T01:intron 50.0%
GTGTCTTGGCCCAAGTCTAA+CGG - Chr7:73535451-73535470 None:intergenic 50.0%
TAGTCTCACACTTCGTCCTG+TGG + Chr7:73538666-73538685 MsG0780040138.01.T01:intron 50.0%
TATGCTTAACCAGTGCTCCG+GGG + Chr7:73536697-73536716 MsG0780040138.01.T01:intron 50.0%
TGTCTTGGCCCAAGTCTAAC+GGG - Chr7:73535450-73535469 None:intergenic 50.0%
! AAAACTGGCTCCAGAAGCAG+GGG - Chr7:73538196-73538215 None:intergenic 50.0%
! ATTTGGAGTGGTGGAGGAAG+TGG + Chr7:73538447-73538466 MsG0780040138.01.T01:intron 50.0%
! CAAGTCTAACGGGTGTCTTG+GGG - Chr7:73535440-73535459 None:intergenic 50.0%
! CAGTACGTGTTGCTCGTTGA+TGG + Chr7:73538805-73538824 MsG0780040138.01.T01:intron 50.0%
! CCAAGTCTAACGGGTGTCTT+GGG - Chr7:73535441-73535460 None:intergenic 50.0%
! TGGAGGTGGATCGGTTCAAA+TGG + Chr7:73537597-73537616 MsG0780040138.01.T01:CDS 50.0%
!! CAGTGGGTAATGGATCTTGG+AGG + Chr7:73537580-73537599 MsG0780040138.01.T01:CDS 50.0%
!! TGGGTAATGGATCTTGGAGG+TGG + Chr7:73537583-73537602 MsG0780040138.01.T01:CDS 50.0%
AATGTTAACCGATGCCCCGG+GGG + Chr7:73536557-73536576 MsG0780040138.01.T01:intron 55.0%
ATGCTTAACCAGTGCTCCGG+GGG + Chr7:73536698-73536717 MsG0780040138.01.T01:intron 55.0%
CCCAAGACACCCGTTAGACT+TGG + Chr7:73535438-73535457 MsG0780040138.01.T01:five_prime_UTR 55.0%
CTGCTAACTGGTCCGCTAAC+TGG - Chr7:73536725-73536744 None:intergenic 55.0%
GCCAAGACACCCGTTAGACT+TGG + Chr7:73535461-73535480 MsG0780040138.01.T01:intron 55.0%
GTCATCTATTGCGGGACGGA+GGG + Chr7:73536893-73536912 MsG0780040138.01.T01:intron 55.0%
TATCCTTAACCAGTGCCCCC+GGG - Chr7:73536575-73536594 None:intergenic 55.0%
TCCGCGTATGCACTCAAACC+GGG - Chr7:73535342-73535361 None:intergenic 55.0%
! ACCCGGTTTGAGTGCATACG+CGG + Chr7:73535338-73535357 MsG0780040138.01.T01:five_prime_UTR 55.0%
! CAGTTAGCGGACCAGTTAGC+AGG + Chr7:73536723-73536742 MsG0780040138.01.T01:intron 55.0%
! CCCAAGTCTAACGGGTGTCT+TGG - Chr7:73535442-73535461 None:intergenic 55.0%
! GGCAGAAAGTGTGGTTCCTG+AGG + Chr7:73535407-73535426 MsG0780040138.01.T01:five_prime_UTR 55.0%
! GGTGGAATTTGGAGTGGTGG+AGG + Chr7:73538441-73538460 MsG0780040138.01.T01:intron 55.0%
!! GGGGGCACTGGTTAAGGATA+TGG + Chr7:73536575-73536594 MsG0780040138.01.T01:intron 55.0%
AAGGCCAATGCCCCTGCTTC+TGG + Chr7:73538183-73538202 MsG0780040138.01.T01:intron 60.0%
ATCCTTAACCAGTGCCCCCG+GGG - Chr7:73536574-73536593 None:intergenic 60.0%
GGTCATCTATTGCGGGACGG+AGG + Chr7:73536892-73536911 MsG0780040138.01.T01:intron 60.0%
GTGGAAGCTGCATGGCCTCT+AGG + Chr7:73538988-73539007 MsG0780040138.01.T01:CDS 60.0%
! TAACGGGTGTCTTGGGGCGT+TGG - Chr7:73535434-73535453 None:intergenic 60.0%
TAACTGGTCCCCCGGAGCAC+TGG - Chr7:73536709-73536728 None:intergenic 65.0%
TGCTCCGGGGGACCAGTTAG+CGG + Chr7:73536710-73536729 MsG0780040138.01.T01:intron 65.0%
TGGTCCGCTAACTGGTCCCC+CGG - Chr7:73536717-73536736 None:intergenic 65.0%
! GGCTCCAGAAGCAGGGGCAT+TGG - Chr7:73538190-73538209 None:intergenic 65.0%
!! GTCTTGGGGCGTTGGTCCTC+AGG - Chr7:73535426-73535445 None:intergenic 65.0%
AACCAGTGCCCCCGGGGCAT+CGG - Chr7:73536568-73536587 None:intergenic 70.0%
!! TGCCCCGGGGGCACTGGTTA+AGG + Chr7:73536569-73536588 MsG0780040138.01.T01:intron 70.0%
! AACCGATGCCCCGGGGGCAC+TGG + Chr7:73536563-73536582 MsG0780040138.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 73534009 73539252 73534009 ID=MsG0780040138.01;Name=MsG0780040138.01
Chr7 mRNA 73534009 73539252 73534009 ID=MsG0780040138.01.T01;Parent=MsG0780040138.01;Name=MsG0780040138.01.T01;_AED=0.49;_eAED=0.49;_QI=621|0.83|1|1|0.16|0.14|7|181|136
Chr7 exon 73534009 73534325 73534009 ID=MsG0780040138.01.T01:exon:10050;Parent=MsG0780040138.01.T01
Chr7 exon 73535333 73535461 73535333 ID=MsG0780040138.01.T01:exon:10051;Parent=MsG0780040138.01.T01
Chr7 exon 73536371 73536426 73536371 ID=MsG0780040138.01.T01:exon:10052;Parent=MsG0780040138.01.T01
Chr7 exon 73537005 73537097 73537005 ID=MsG0780040138.01.T01:exon:10053;Parent=MsG0780040138.01.T01
Chr7 exon 73537533 73537734 73537533 ID=MsG0780040138.01.T01:exon:10054;Parent=MsG0780040138.01.T01
Chr7 exon 73537820 73537911 73537820 ID=MsG0780040138.01.T01:exon:10055;Parent=MsG0780040138.01.T01
Chr7 exon 73538929 73539252 73538929 ID=MsG0780040138.01.T01:exon:10056;Parent=MsG0780040138.01.T01
Chr7 five_prime_UTR 73534009 73534325 73534009 ID=MsG0780040138.01.T01:five_prime_utr;Parent=MsG0780040138.01.T01
Chr7 five_prime_UTR 73535333 73535461 73535333 ID=MsG0780040138.01.T01:five_prime_utr;Parent=MsG0780040138.01.T01
Chr7 five_prime_UTR 73536371 73536426 73536371 ID=MsG0780040138.01.T01:five_prime_utr;Parent=MsG0780040138.01.T01
Chr7 five_prime_UTR 73537005 73537097 73537005 ID=MsG0780040138.01.T01:five_prime_utr;Parent=MsG0780040138.01.T01
Chr7 five_prime_UTR 73537533 73537558 73537533 ID=MsG0780040138.01.T01:five_prime_utr;Parent=MsG0780040138.01.T01
Chr7 CDS 73537559 73537734 73537559 ID=MsG0780040138.01.T01:cds;Parent=MsG0780040138.01.T01
Chr7 CDS 73537820 73537911 73537820 ID=MsG0780040138.01.T01:cds;Parent=MsG0780040138.01.T01
Chr7 CDS 73538929 73539071 73538929 ID=MsG0780040138.01.T01:cds;Parent=MsG0780040138.01.T01
Chr7 three_prime_UTR 73539072 73539252 73539072 ID=MsG0780040138.01.T01:three_prime_utr;Parent=MsG0780040138.01.T01
Chr7 mRNA 73534166 73537112 73534166 ID=MsG0780040138.01.T02;Parent=MsG0780040138.01;Name=MsG0780040138.01.T02;_AED=0.50;_eAED=0.51;_QI=0|0|0|1|0.5|0.33|3|0|103
Chr7 exon 73534166 73534252 73534166 ID=MsG0780040138.01.T02:exon:10057;Parent=MsG0780040138.01.T02
Chr7 exon 73535333 73535449 73535333 ID=MsG0780040138.01.T02:exon:10058;Parent=MsG0780040138.01.T02
Chr7 exon 73537005 73537112 73537005 ID=MsG0780040138.01.T02:exon:10059;Parent=MsG0780040138.01.T02
Chr7 CDS 73534166 73534252 73534166 ID=MsG0780040138.01.T02:cds;Parent=MsG0780040138.01.T02
Chr7 CDS 73535333 73535449 73535333 ID=MsG0780040138.01.T02:cds;Parent=MsG0780040138.01.T02
Chr7 CDS 73537005 73537112 73537005 ID=MsG0780040138.01.T02:cds;Parent=MsG0780040138.01.T02
Gene Sequence

>MsG0780040138.01.T02

ATGTTACGCACTAACCGTAAGATATTCCCAAAACAAGAACCAATTTCCTCTTATGCTGTTGTGTTTGATGCTGGTAGCACGGAAGCCACTACACCCGGTTTGAGTGCATACGCGGATAATCCAGAAGAAGCTGCAAAATCTTTGATTCCACTTTTAGAGCAGGCAGAAAGTGTGGTTCCTGAGGACCAACGCCCCAAGACACCCGTAAGGGATTTGTTCAGCAACAGAAGTACCTTCAACGTTCAACGTGATGCAGTTTCTATTATTGATGGAACCCAAGAAGGTTCTTATCTCTGGGTACGTATGACTTAA

>MsG0780040138.01.T01

ATGGGGAAAAATTCACAAAAACAGTGGGTAATGGATCTTGGAGGTGGATCGGTTCAAATGGCATATGCAGTGTCAAGGAATACAGCTAAAAATGCTCCAAAAGTTGCAGATGGAGAAGATCCATACATTAAGAAGCTTGTACTCAAGGGAAAAAAATATGATCTCTATGTTCATAGTTACTTACACTTTGGTAGAGAAGCATCTCGGGCAGAGATTTTGAAGGTCACTCATAATTCTCCTAACCCTTGCATTTTAGCTGGATTTGATGGCTTAGATCCATTGCAAGAGATTACAGCGGGAAAGCAAATTGAATATCAAGATTCTCTTGTGGAAGCTGCATGGCCTCTAGGAAATGCTGTAGAAGCCATATCATCGTTACCTAAATTTGAACGATTGATGTATTTTATTTAA
Protein sequence

>MsG0780040138.01.T02

MLRTNRKIFPKQEPISSYAVVFDAGSTEATTPGLSAYADNPEEAAKSLIPLLEQAESVVPEDQRPKTPVRDLFSNRSTFNVQRDAVSIIDGTQEGSYLWVRMT*

>MsG0780040138.01.T01

MGKNSQKQWVMDLGGGSVQMAYAVSRNTAKNAPKVADGEDPYIKKLVLKGKKYDLYVHSYLHFGREASRAEILKVTHNSPNPCILAGFDGLDPLQEITAGKQIEYQDSLVEAAWPLGNAVEAISSLPKFERLMYFI*