AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040023.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040023.01.T01 MTR_7g085150 76.382 199 46 1 81 278 9 207 8.52e-105 316
MsG0780040023.01.T01 MTR_7g085150 76.382 199 46 1 81 278 9 207 3.69e-104 315
MsG0780040023.01.T01 MTR_7g085150 68.421 95 29 1 285 378 384 478 1.92e-36 138
MsG0780040023.01.T01 MTR_7g085180 67.089 237 55 3 109 331 17 244 1.90e-103 313
MsG0780040023.01.T01 MTR_7g085180 90.426 94 9 0 285 378 362 455 2.32e-55 188
MsG0780040023.01.T01 MTR_7g085200 75.135 185 46 0 94 278 1 185 3.64e-96 294
MsG0780040023.01.T01 MTR_7g085200 51.064 94 46 0 285 378 361 454 6.58e-29 117
MsG0780040023.01.T01 MTR_7g085200 74.332 187 46 1 94 278 1 187 3.48e-94 289
MsG0780040023.01.T01 MTR_7g085200 51.064 94 46 0 285 378 363 456 6.99e-29 117
MsG0780040023.01.T01 MTR_7g085120 77.647 170 38 0 109 278 17 186 2.21e-93 287
MsG0780040023.01.T01 MTR_7g085120 71.429 91 25 1 289 378 366 456 9.26e-38 141
MsG0780040023.01.T01 MTR_4g036220 67.347 196 44 2 84 278 1 177 4.55e-84 262
MsG0780040023.01.T01 MTR_4g036220 71.579 95 26 1 285 378 339 433 3.27e-39 145
MsG0780040023.01.T01 MTR_7g085090 50.000 240 113 4 98 331 29 267 1.11e-72 234
MsG0780040023.01.T01 MTR_7g085090 53.012 83 39 0 285 367 384 466 1.84e-24 104
MsG0780040023.01.T01 MTR_6g033000 53.757 173 80 0 106 278 50 222 2.03e-60 202
MsG0780040023.01.T01 MTR_6g033000 53.571 84 39 0 285 368 399 482 1.62e-25 107
MsG0780040023.01.T01 MTR_7g085160 80.851 94 10 1 285 378 134 219 4.76e-47 160
MsG0780040023.01.T01 MTR_3g073470 79.104 67 14 0 1 67 15 81 2.00e-27 114
MsG0780040023.01.T01 MTR_7g012360 83.871 62 8 1 1 62 1 60 5.62e-26 99.4
MsG0780040023.01.T01 MTR_7g017460 76.056 71 12 2 1 68 1 69 7.57e-26 100
MsG0780040023.01.T01 MTR_5g040710 34.375 192 99 7 91 274 42 214 1.31e-23 102
MsG0780040023.01.T01 MTR_7g090490 83.871 62 8 1 1 62 1 60 2.02e-20 84.3
MsG0780040023.01.T01 MTR_4g105480 28.365 208 109 6 96 277 21 214 4.89e-16 80.1
MsG0780040023.01.T01 MTR_8g072360 30.909 165 93 3 131 274 96 260 3.40e-15 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040023.01.T01 AT5G18280 56.774 155 67 0 124 278 58 212 1.46e-53 184
MsG0780040023.01.T01 AT5G18280 49.398 83 42 0 285 367 389 471 7.95e-23 100
MsG0780040023.01.T01 AT3G04080 51.515 165 80 0 109 273 42 206 1.74e-51 179
MsG0780040023.01.T01 AT3G04080 49.398 83 42 0 285 367 388 470 1.17e-21 96.7
MsG0780040023.01.T01 AT1G14250 41.844 141 79 2 137 275 71 210 6.70e-25 106
MsG0780040023.01.T01 AT1G14240 35.602 191 110 4 90 275 27 209 6.85e-24 103
MsG0780040023.01.T01 AT1G14240 35.602 191 110 4 90 275 27 209 6.85e-24 103
MsG0780040023.01.T01 AT1G14240 35.602 191 110 4 90 275 27 209 6.85e-24 103
MsG0780040023.01.T01 AT1G14230 35.263 190 109 5 89 275 42 220 1.04e-22 99.8
MsG0780040023.01.T01 AT2G02970 39.716 141 82 2 137 275 87 226 2.32e-22 99.0
MsG0780040023.01.T01 AT1G14240 34.555 191 108 5 90 275 27 205 1.27e-20 93.6
MsG0780040023.01.T01 AT4G19180 28.931 159 90 3 132 271 140 294 2.52e-12 68.9
MsG0780040023.01.T01 AT4G19180 28.931 159 90 3 132 271 140 294 2.52e-12 68.9
MsG0780040023.01.T01 AT4G19180 28.931 159 90 3 132 271 140 294 2.52e-12 68.9

Find 86 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAGGCAACCGCGGGTTTA+AGG 0.202461 7:-72126035 MsG0780040023.01.T01:intron
TACATTAATCTCTCAAATTT+AGG 0.216970 7:+72122681 None:intergenic
TTATACTGATCTTGTGGATA+TGG 0.243846 7:-72122543 MsG0780040023.01.T01:three_prime_UTR
CCCACATATAAGAACCTTCT+TGG 0.273411 7:+72125799 None:intergenic
CCCAAGCCTAAGGGGTGTTT+TGG 0.282023 7:+72128518 None:intergenic
TTAACTATGTATTGGGGAAT+TGG 0.290795 7:-72124677 MsG0780040023.01.T01:CDS
GAGGTTAGGGCTTCTTGTTT+TGG 0.293335 7:+72128844 None:intergenic
AACCAAACCCTTCTCTTTCA+TGG 0.293598 7:-72130078 MsG0780040023.01.T01:CDS
CAACATGTGTTGCTCGTTCA+TGG 0.311386 7:-72122956 MsG0780040023.01.T01:CDS
GTGACAGTTAACTATGTATT+GGG 0.320917 7:-72124684 MsG0780040023.01.T01:CDS
CTCCGTAAGACGAGGATAAA+TGG 0.342782 7:+72123015 None:intergenic
AACCGCGGGTTTAAGGCTTT+TGG 0.352299 7:-72126028 MsG0780040023.01.T01:CDS
AATTTAATTCTTTATAAAGT+TGG 0.358665 7:+72122612 None:intergenic
GATGCAGTTTCAATTATAGA+TGG 0.368431 7:-72125825 MsG0780040023.01.T01:CDS
AATTGAGACTAGTTTCAAAA+TGG 0.369899 7:-72128998 MsG0780040023.01.T01:CDS
ATATGACAACATACGAGGTT+AGG 0.374979 7:+72128830 None:intergenic
CCAAAACACCCCTTAGGCTT+GGG 0.387043 7:-72128518 MsG0780040023.01.T01:CDS
GATCTAAGTTCTGATCAAAA+TGG 0.389966 7:+72128770 None:intergenic
TCTCCAACAAATTCATCAAA+TGG 0.392870 7:-72130142 MsG0780040023.01.T01:CDS
CTCTCTTCCTCCCAATATCT+TGG 0.395649 7:-72128898 MsG0780040023.01.T01:CDS
TAACTATGTATTGGGGAATT+GGG 0.402956 7:-72124676 MsG0780040023.01.T01:CDS
GACCCATTTGATGAATTTGT+TGG 0.403227 7:+72130139 None:intergenic
TAAATTAAATTAAATAAAAG+TGG 0.406398 7:-72122595 MsG0780040023.01.T01:three_prime_UTR
CGCCATGAAAGAGAAGGGTT+TGG 0.419762 7:+72130076 None:intergenic
GGTGACAGTTAACTATGTAT+TGG 0.433794 7:-72124685 MsG0780040023.01.T01:CDS
TTAACATGAACATTGTTGTC+TGG 0.437073 7:+72130037 None:intergenic
ATCCATTTATCCTCGTCTTA+CGG 0.437580 7:-72123017 MsG0780040023.01.T01:CDS
GTGTTGCTCGTTCATGGATT+TGG 0.442498 7:-72122950 MsG0780040023.01.T01:intron
AGCTTGTGCATTAAACTTTG+AGG 0.451748 7:-72123047 MsG0780040023.01.T01:CDS
CCCAAGAAGGTTCTTATATG+TGG 0.452789 7:-72125800 MsG0780040023.01.T01:CDS
AAGAGATCCATGCATACATA+TGG 0.457084 7:+72122983 None:intergenic
CCCACTGTAATTTCTTGTTG+AGG 0.459373 7:+72122783 None:intergenic
ATTATAGATGGAACCCAAGA+AGG 0.461015 7:-72125813 MsG0780040023.01.T01:CDS
TATTGGGAGGAAGAGAGAGC+AGG 0.461825 7:+72128904 None:intergenic
GTGGAAGCTGCATGGCCTCT+AGG 0.468068 7:-72122732 MsG0780040023.01.T01:CDS
ACAAGAAATTACAGTGGGGC+AGG 0.468961 7:-72122778 MsG0780040023.01.T01:CDS
TCCAAAACACCCCTTAGGCT+TGG 0.473783 7:-72128519 MsG0780040023.01.T01:CDS
CCACATATAAGAACCTTCTT+GGG 0.475690 7:+72125800 None:intergenic
CATGCTTTATACTGATCTTG+TGG 0.477044 7:-72122549 MsG0780040023.01.T01:three_prime_UTR
CTCCAACAAATTCATCAAAT+GGG 0.489507 7:-72130141 MsG0780040023.01.T01:CDS
GAACAAGATGAAGTTGTTGA+TGG 0.498321 7:-72129995 MsG0780040023.01.T01:intron
CAGTATAAAGCATGGAAGAA+AGG 0.502242 7:+72122558 None:intergenic
TATGACAACATACGAGGTTA+GGG 0.506011 7:+72128831 None:intergenic
GAAATGTGATGAGTGTGATT+AGG 0.506969 7:+72128941 None:intergenic
AAAACTCACCCCAAGCCTAA+GGG 0.507438 7:+72128509 None:intergenic
CTCTCTGCTTCTTCTAGAAG+TGG 0.508455 7:+72128564 None:intergenic
TCCGCGTATGCACTCAAACC+TGG 0.513693 7:+72128618 None:intergenic
TTTGATGAATTTGTTGGAGA+CGG 0.514853 7:+72130145 None:intergenic
ATATTTGATGCTGGTAGCAC+TGG 0.520451 7:-72128811 MsG0780040023.01.T01:CDS
AAACTAGCTACTAGTGGTAG+AGG 0.525686 7:+72129021 None:intergenic
AAAAGCTTCACAAACACAAT+GGG 0.525793 7:-72124652 MsG0780040023.01.T01:CDS
TATGTTGTCATATTTGATGC+TGG 0.538638 7:-72128820 MsG0780040023.01.T01:CDS
ATATTAATGCAGGCAACCGC+GGG 0.538900 7:-72126042 MsG0780040023.01.T01:intron
AATATTAATGCAGGCAACCG+CGG 0.543327 7:-72126043 MsG0780040023.01.T01:intron
ACTCATCATAAGAACATGGC+TGG 0.546358 7:+72122512 None:intergenic
TCAATATCAGAATTCTGTTG+TGG 0.555684 7:-72122751 MsG0780040023.01.T01:CDS
CACAAGATCAGTATAAAGCA+TGG 0.556202 7:+72122550 None:intergenic
CCAAGAAGGTTCTTATATGT+GGG 0.585394 7:-72125799 MsG0780040023.01.T01:intron
CAAAACACCCCTTAGGCTTG+GGG 0.601715 7:-72128517 MsG0780040023.01.T01:intron
CATGAACGAGCAACACATGT+TGG 0.602847 7:+72122957 None:intergenic
TCTGATCAAAATGGTAGACA+TGG 0.603308 7:+72128779 None:intergenic
AGTAAACGCCATGAAAGAGA+AGG 0.604955 7:+72130070 None:intergenic
TGCTGAAAAGATATTGCAAG+CGG 0.605130 7:-72125995 MsG0780040023.01.T01:intron
CAAGAAATTACAGTGGGGCA+GGG 0.615665 7:-72122777 MsG0780040023.01.T01:CDS
CCTCAACAAGAAATTACAGT+GGG 0.620628 7:-72122783 MsG0780040023.01.T01:CDS
TCAATTAAACTAGCTACTAG+TGG 0.623394 7:+72129015 None:intergenic
ACCAGGTTTGAGTGCATACG+CGG 0.623511 7:-72128619 MsG0780040023.01.T01:CDS
ATCCAAAAGCCTTAAACCCG+CGG 0.630783 7:+72126026 None:intergenic
AAACTCACCCCAAGCCTAAG+GGG 0.631016 7:+72128510 None:intergenic
CAAAATGGTAGACATGGACA+CGG 0.633528 7:+72128785 None:intergenic
GTAAACGCCATGAAAGAGAA+GGG 0.634712 7:+72130071 None:intergenic
CATTTATCCTCGTCTTACGG+AGG 0.636034 7:-72123014 MsG0780040023.01.T01:CDS
ATTCTGTTGTGGAAGCTGCA+TGG 0.638309 7:-72122740 MsG0780040023.01.T01:CDS
GACGAGCTGAAATATTTCAA+CGG 0.640858 7:-72122641 MsG0780040023.01.T01:three_prime_UTR
TGATATTGAGTTTGTTGACA+AGG 0.645926 7:-72128731 MsG0780040023.01.T01:intron
AAAACGTCCATATGTATGCA+TGG 0.648697 7:-72122990 MsG0780040023.01.T01:CDS
TGCACTCCAAAACACCCCTT+AGG 0.653249 7:-72128524 MsG0780040023.01.T01:CDS
ACGAACTCATCATAAGAACA+TGG 0.656095 7:+72122508 None:intergenic
GATGTTATATAGATCAAACC+AGG 0.666409 7:-72128636 MsG0780040023.01.T01:intron
GCTTCCACAGCAGTACCTAG+AGG 0.667708 7:+72122717 None:intergenic
TGACAGTTAACTATGTATTG+GGG 0.677718 7:-72124683 MsG0780040023.01.T01:CDS
ATGGCCTCTAGGTACTGCTG+TGG 0.694462 7:-72122721 MsG0780040023.01.T01:CDS
ATCAAATATGACAACATACG+AGG 0.698857 7:+72128825 None:intergenic
TCCTCAACAAGAAATTACAG+TGG 0.705806 7:-72122784 MsG0780040023.01.T01:CDS
AAAATGGTAGACATGGACAC+GGG 0.710777 7:+72128786 None:intergenic
CTCAACAAGAAATTACAGTG+GGG 0.779971 7:-72122782 MsG0780040023.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTATAATTATTTTTT+TGG + Chr7:72123281-72123300 None:intergenic 0.0%
!!! AAAATTATAATTATTTTTTT+GGG + Chr7:72123280-72123299 None:intergenic 0.0%
!! AATTTAATTCTTTATAAAGT+TGG + Chr7:72130026-72130045 None:intergenic 10.0%
!! TTGAAATTTGAAAATAATAT+TGG - Chr7:72123217-72123236 MsG0780040023.01.T01:intron 10.0%
!!! ATTTTCAGTATAATTTTTTT+TGG - Chr7:72125147-72125166 MsG0780040023.01.T01:intron 10.0%
!!! TAATTTTTTTTTTTTTAGGT+TGG - Chr7:72129500-72129519 MsG0780040023.01.T01:intron 10.0%
!!! TCAATAATTTTTTTTTTTTG+AGG + Chr7:72127651-72127670 None:intergenic 10.0%
!!! TTTTATTTTTTAAGCAAATA+TGG - Chr7:72128944-72128963 MsG0780040023.01.T01:CDS 10.0%
!!! TTTTTGAAAATGATTTTTTA+CGG - Chr7:72125210-72125229 MsG0780040023.01.T01:intron 10.0%
!! AAAAAACATTATTACATCAT+GGG - Chr7:72124277-72124296 MsG0780040023.01.T01:intron 15.0%
!! AAATCACCTATTTATTTAAA+AGG + Chr7:72125443-72125462 None:intergenic 15.0%
!! ACATAGATAATTAACAAAAT+TGG + Chr7:72122881-72122900 None:intergenic 15.0%
!! AGTTAAAATATCTACATATA+TGG + Chr7:72128475-72128494 None:intergenic 15.0%
!! ATATACTAATATTCATCAAT+TGG - Chr7:72126541-72126560 MsG0780040023.01.T01:intron 15.0%
!! CCTTATTAATAAATCAAAAA+AGG - Chr7:72125032-72125051 MsG0780040023.01.T01:intron 15.0%
!! TAAAAAACATTATTACATCA+TGG - Chr7:72124276-72124295 MsG0780040023.01.T01:intron 15.0%
!! TAAGATTAAATCTAAATTGT+CGG - Chr7:72124652-72124671 MsG0780040023.01.T01:CDS 15.0%
!! TCAAAAGAAAAAAATTTGAT+CGG - Chr7:72127328-72127347 MsG0780040023.01.T01:intron 15.0%
!! TGAATATTAGTATATACTTT+AGG + Chr7:72126536-72126555 None:intergenic 15.0%
!! TGATGTATATTATATATGAA+TGG - Chr7:72128215-72128234 MsG0780040023.01.T01:intron 15.0%
!! TTATGTTAATTAAACAAGTT+TGG + Chr7:72127767-72127786 None:intergenic 15.0%
!! TTTAAAAAAAAAAACCTTGT+GGG - Chr7:72127003-72127022 MsG0780040023.01.T01:intron 15.0%
!! TTTAAATTAAATATATTCCG+AGG - Chr7:72123299-72123318 MsG0780040023.01.T01:intron 15.0%
!!! AAATGAATTTTATGAAGATA+AGG + Chr7:72124319-72124338 None:intergenic 15.0%
!!! AAATGTTTTTAACAAGTAAA+TGG - Chr7:72129786-72129805 MsG0780040023.01.T01:intron 15.0%
!!! AATTTGAAATTCAAAAGTTT+TGG - Chr7:72123252-72123271 MsG0780040023.01.T01:intron 15.0%
!!! CCTTTTTTGATTTATTAATA+AGG + Chr7:72125035-72125054 None:intergenic 15.0%
!!! GAGATTAATGTATTTTATTT+AGG - Chr7:72129965-72129984 MsG0780040023.01.T01:intron 15.0%
!!! TAATTTGTAAATTTGATACT+TGG - Chr7:72127917-72127936 MsG0780040023.01.T01:intron 15.0%
!!! TTTTAAAAAAAAAAACCTTG+TGG - Chr7:72127002-72127021 MsG0780040023.01.T01:intron 15.0%
!! AAAACACTTCAATAATTGTT+GGG + Chr7:72127628-72127647 None:intergenic 20.0%
!! AAAATATGAATATATGTGTG+TGG + Chr7:72129120-72129139 None:intergenic 20.0%
!! AAGAAAATGAATTAAGAAAG+GGG + Chr7:72126975-72126994 None:intergenic 20.0%
!! AATAATATTAAACATGAGTG+TGG + Chr7:72123412-72123431 None:intergenic 20.0%
!! AATATATTACCATTAAATCC+AGG + Chr7:72128361-72128380 None:intergenic 20.0%
!! AATTATGGAATATCAACAAA+AGG - Chr7:72124250-72124269 MsG0780040023.01.T01:intron 20.0%
!! AATTTGATCTATATACTTTG+AGG + Chr7:72128857-72128876 None:intergenic 20.0%
!! AATTTGTAGAATATTAATGC+AGG - Chr7:72126583-72126602 MsG0780040023.01.T01:intron 20.0%
!! AGAAGAAAATGAATTAAGAA+AGG + Chr7:72126977-72126996 None:intergenic 20.0%
!! ATAAAAACCTCTAATAAAAC+AGG + Chr7:72128179-72128198 None:intergenic 20.0%
!! ATCATTTAGAAATTCAATGT+TGG - Chr7:72128531-72128550 MsG0780040023.01.T01:CDS 20.0%
!! ATGTGTTTATAATATAGCTA+AGG + Chr7:72126508-72126527 None:intergenic 20.0%
!! CAATAAATCAATATATGAGA+TGG - Chr7:72123519-72123538 MsG0780040023.01.T01:intron 20.0%
!! GAACATTAATTAAGTATAAG+TGG - Chr7:72127025-72127044 MsG0780040023.01.T01:intron 20.0%
!! GAAGAAAATGAATTAAGAAA+GGG + Chr7:72126976-72126995 None:intergenic 20.0%
!! TAAAATTAAAGTTTCGTGAA+TGG - Chr7:72126872-72126891 MsG0780040023.01.T01:intron 20.0%
!! TACATTAATCTCTCAAATTT+AGG + Chr7:72129957-72129976 None:intergenic 20.0%
!! TACTCCTTAATTAAATTATG+TGG - Chr7:72127532-72127551 MsG0780040023.01.T01:intron 20.0%
!! TCAAACTATTTGATGAATTA+TGG - Chr7:72124235-72124254 MsG0780040023.01.T01:intron 20.0%
!! TGTTTATCGAAATGAAATAA+TGG + Chr7:72127222-72127241 None:intergenic 20.0%
!! TTAACAAAATTGGAACAAAA+TGG + Chr7:72122871-72122890 None:intergenic 20.0%
!! TTGCAAAGAAATAATTCTTA+AGG - Chr7:72129271-72129290 MsG0780040023.01.T01:intron 20.0%
!!! AAATATTTGAGTTACTAGTT+TGG - Chr7:72128809-72128828 MsG0780040023.01.T01:CDS 20.0%
!!! AAGCTTTAATTTTCTTGATT+AGG - Chr7:72126743-72126762 MsG0780040023.01.T01:intron 20.0%
!!! AAGGAGTATATTGTTTTTAA+AGG + Chr7:72127520-72127539 None:intergenic 20.0%
!!! ACAGATCCTTTTAAATAAAT+AGG - Chr7:72125434-72125453 MsG0780040023.01.T01:intron 20.0%
!!! ATATTGATTTATTGATTGTG+TGG + Chr7:72123513-72123532 None:intergenic 20.0%
!!! ATGTCTTAATTTTGAGTTTT+TGG - Chr7:72124192-72124211 MsG0780040023.01.T01:intron 20.0%
!!! TAATTTTCTTGATTAGGTAA+GGG - Chr7:72126749-72126768 MsG0780040023.01.T01:intron 20.0%
!!! TATGTTTTTTCCAAGATATT+GGG + Chr7:72123750-72123769 None:intergenic 20.0%
!!! TGAATGGTATTATATACTTT+TGG - Chr7:72126888-72126907 MsG0780040023.01.T01:intron 20.0%
!!! TGAGTTTTTATCCTAAAATT+AGG + Chr7:72127089-72127108 None:intergenic 20.0%
!!! TGTACTTTTTTTTTTGTTGA+GGG + Chr7:72124899-72124918 None:intergenic 20.0%
!!! TGTAGTACACTTTTTTTATT+GGG - Chr7:72128757-72128776 MsG0780040023.01.T01:CDS 20.0%
!!! TTAAGGATATAGAAAGTATA+GGG - Chr7:72123375-72123394 MsG0780040023.01.T01:intron 20.0%
!!! TTAATTTTCTTGATTAGGTA+AGG - Chr7:72126748-72126767 MsG0780040023.01.T01:intron 20.0%
!!! TTGTACTTTTTTTTTTGTTG+AGG + Chr7:72124900-72124919 None:intergenic 20.0%
!!! TTGTAGTACACTTTTTTTAT+TGG - Chr7:72128756-72128775 MsG0780040023.01.T01:CDS 20.0%
!!! TTTTAAATATTTCTTCTCTC+CGG - Chr7:72125333-72125352 MsG0780040023.01.T01:intron 20.0%
!!! TTTTTTTTTTTAGGTTGGTA+TGG - Chr7:72129505-72129524 MsG0780040023.01.T01:intron 20.0%
! AAGACTAAGGATTGAAATAT+GGG - Chr7:72127799-72127818 MsG0780040023.01.T01:intron 25.0%
! AATATGATCTCTATGTTCAT+AGG - Chr7:72128134-72128153 MsG0780040023.01.T01:intron 25.0%
! AATTATAGCTCTTAAAATCG+TGG - Chr7:72125909-72125928 MsG0780040023.01.T01:intron 25.0%
! ACAATATCACAGTAATCAAA+TGG + Chr7:72122799-72122818 None:intergenic 25.0%
! ATAGAGTTAAGACAATCATT+AGG + Chr7:72129814-72129833 None:intergenic 25.0%
! ATATTAGAGTTACAAGACTA+AGG - Chr7:72127786-72127805 MsG0780040023.01.T01:intron 25.0%
! ATGGAATGAAAAAGAGTTAT+CGG + Chr7:72122527-72122546 None:intergenic 25.0%
! ATTGAAGCAAGCAATAAAAA+GGG - Chr7:72124827-72124846 MsG0780040023.01.T01:intron 25.0%
! ATTGTCTTAACTCTATTTGT+TGG - Chr7:72129818-72129837 MsG0780040023.01.T01:intron 25.0%
! CTTTCTCAACAAAAGATATA+CGG + Chr7:72128725-72128744 None:intergenic 25.0%
! GAAAACACTTCAATAATTGT+TGG + Chr7:72127629-72127648 None:intergenic 25.0%
! GACACCACATAATTTAATTA+AGG + Chr7:72127539-72127558 None:intergenic 25.0%
! GGCTAATTAATGTATATTGA+GGG - Chr7:72128236-72128255 MsG0780040023.01.T01:intron 25.0%
! TAGTTCTTATCTTAGAGAAT+GGG - Chr7:72122703-72122722 MsG0780040023.01.T01:CDS 25.0%
! TATTGAAGCAAGCAATAAAA+AGG - Chr7:72124826-72124845 MsG0780040023.01.T01:intron 25.0%
! TCAAATAGTTTGATTATGTG+TGG + Chr7:72124228-72124247 None:intergenic 25.0%
! TGCACAAAATTGAACATAAT+CGG + Chr7:72122932-72122951 None:intergenic 25.0%
! TGGCTAATTAATGTATATTG+AGG - Chr7:72128235-72128254 MsG0780040023.01.T01:intron 25.0%
!! AAAATTAAAGCTTTAGCCAT+TGG + Chr7:72126736-72126755 None:intergenic 25.0%
!! AAAGTACAAACTTGTTTGTT+TGG - Chr7:72124911-72124930 MsG0780040023.01.T01:intron 25.0%
!! AAATTTGTGACACTTTTCTT+TGG + Chr7:72129763-72129782 None:intergenic 25.0%
!! AGAAGTAGTTACTTTGTTAT+TGG + Chr7:72129166-72129185 None:intergenic 25.0%
!! CCTTTAATAAGCTAACTTTT+GGG - Chr7:72127734-72127753 MsG0780040023.01.T01:intron 25.0%
!! GTTAAGGATATAGAAAGTAT+AGG - Chr7:72123374-72123393 MsG0780040023.01.T01:intron 25.0%
!! TATAGAAAGTATAGGGAAAA+TGG - Chr7:72123382-72123401 MsG0780040023.01.T01:intron 25.0%
!! TCCTTTAATAAGCTAACTTT+TGG - Chr7:72127733-72127752 MsG0780040023.01.T01:intron 25.0%
!! TCTCATCTAAAATGAACTAA+AGG - Chr7:72124512-72124531 MsG0780040023.01.T01:intron 25.0%
!! TCTTTTTCTTCTTCTTCAAA+GGG - Chr7:72129183-72129202 MsG0780040023.01.T01:intron 25.0%
!! TTCTTTTTCTTCTTCTTCAA+AGG - Chr7:72129182-72129201 MsG0780040023.01.T01:intron 25.0%
!! TTTGGTTTCCTAATATTAAG+AGG - Chr7:72124737-72124756 MsG0780040023.01.T01:intron 25.0%
!!! AATTGAGACTAGTTTCAAAA+TGG - Chr7:72123637-72123656 MsG0780040023.01.T01:intron 25.0%
!!! CTTTTTTTTTTGGTAAGACT+AGG + Chr7:72126048-72126067 None:intergenic 25.0%
!!! GTATGTTTTTTCCAAGATAT+TGG + Chr7:72123751-72123770 None:intergenic 25.0%
!!! TAATCTTAATTTGCATCCAA+TGG - Chr7:72126717-72126736 MsG0780040023.01.T01:intron 25.0%
!!! TCGATTTTTTTACATACTAC+TGG - Chr7:72128400-72128419 MsG0780040023.01.T01:intron 25.0%
!!! TCTTTTTCCTGTTTTATTAG+AGG - Chr7:72128169-72128188 MsG0780040023.01.T01:intron 25.0%
AAAAAAAAAAGTGACGCTAC+GGG - Chr7:72126057-72126076 MsG0780040023.01.T01:intron 30.0%
AAAAAGCTTCACAAACACAA+TGG - Chr7:72127982-72128001 MsG0780040023.01.T01:intron 30.0%
AAAAGCTTCACAAACACAAT+GGG - Chr7:72127983-72128002 MsG0780040023.01.T01:intron 30.0%
AAAGGAATATATCGACCAAA+CGG + Chr7:72127502-72127521 None:intergenic 30.0%
AAGATTCATTCTAGACATGA+TGG - Chr7:72127832-72127851 MsG0780040023.01.T01:intron 30.0%
AATAATTGTTGGGTCATGAA+CGG + Chr7:72127618-72127637 None:intergenic 30.0%
AATATATGAGATGGAGTGAA+TGG - Chr7:72123528-72123547 MsG0780040023.01.T01:intron 30.0%
ACTTAATTAATGTTCCCACA+AGG + Chr7:72127020-72127039 None:intergenic 30.0%
AGATATGAACAAAAACACCA+AGG + Chr7:72124429-72124448 None:intergenic 30.0%
AGCACAAGCTTCTTAATATA+TGG + Chr7:72128103-72128122 None:intergenic 30.0%
AGCATGGAATTAGGTTTATT+TGG + Chr7:72129536-72129555 None:intergenic 30.0%
ATCAAATATGACAACATACG+AGG + Chr7:72123813-72123832 None:intergenic 30.0%
ATCATCCAAAAAAGTCATTC+CGG + Chr7:72125355-72125374 None:intergenic 30.0%
ATGATGTTTGAACAAGTGTA+AGG - Chr7:72128673-72128692 MsG0780040023.01.T01:intron 30.0%
CAAAAAAAAAAGTGACGCTA+CGG - Chr7:72126056-72126075 MsG0780040023.01.T01:intron 30.0%
CAAGACTAAGGATTGAAATA+TGG - Chr7:72127798-72127817 MsG0780040023.01.T01:intron 30.0%
CTCCAACAAATTCATCAAAT+GGG - Chr7:72122494-72122513 MsG0780040023.01.T01:three_prime_UTR 30.0%
CTCTAGCTATCAAATTACAA+AGG - Chr7:72125008-72125027 MsG0780040023.01.T01:intron 30.0%
GATGCAGTTTCAATTATAGA+TGG - Chr7:72126810-72126829 MsG0780040023.01.T01:intron 30.0%
GATGTGTTATCGAAAATAAG+AGG + Chr7:72128432-72128451 None:intergenic 30.0%
GATGTTATATAGATCAAACC+AGG - Chr7:72123999-72124018 MsG0780040023.01.T01:intron 30.0%
GTAGTTCTTATCTTAGAGAA+TGG - Chr7:72122702-72122721 MsG0780040023.01.T01:CDS 30.0%
GTGACAGTTAACTATGTATT+GGG - Chr7:72127951-72127970 MsG0780040023.01.T01:intron 30.0%
TAAATCCAGGTAAAATGCAA+GGG + Chr7:72128348-72128367 None:intergenic 30.0%
TAACTATGTATTGGGGAATT+GGG - Chr7:72127959-72127978 MsG0780040023.01.T01:intron 30.0%
TACCTTAAAGAGAGATAACT+CGG + Chr7:72127061-72127080 None:intergenic 30.0%
TAGTGTACACCCATATATAT+GGG - Chr7:72128562-72128581 MsG0780040023.01.T01:CDS 30.0%
TATGTTGTCATATTTGATGC+TGG - Chr7:72123815-72123834 MsG0780040023.01.T01:intron 30.0%
TCAATATCAGAATTCTGTTG+TGG - Chr7:72129884-72129903 MsG0780040023.01.T01:intron 30.0%
TCAATTAAACTAGCTACTAG+TGG + Chr7:72123623-72123642 None:intergenic 30.0%
TCTCCAACAAATTCATCAAA+TGG - Chr7:72122493-72122512 MsG0780040023.01.T01:three_prime_UTR 30.0%
TGACAATGTGTTTATAGTAG+AGG + Chr7:72125980-72125999 None:intergenic 30.0%
TGACAGTTAACTATGTATTG+GGG - Chr7:72127952-72127971 MsG0780040023.01.T01:intron 30.0%
TGGTAGATATTGAATGTGTT+TGG - Chr7:72127858-72127877 MsG0780040023.01.T01:intron 30.0%
TTAAATCCAGGTAAAATGCA+AGG + Chr7:72128349-72128368 None:intergenic 30.0%
TTAACATGAACATTGTTGTC+TGG + Chr7:72122601-72122620 None:intergenic 30.0%
TTAACTATGTATTGGGGAAT+TGG - Chr7:72127958-72127977 MsG0780040023.01.T01:intron 30.0%
TTAGTGTACACCCATATATA+TGG - Chr7:72128561-72128580 MsG0780040023.01.T01:CDS 30.0%
TTATACTGATCTTGTGGATA+TGG - Chr7:72130092-72130111 MsG0780040023.01.T01:CDS 30.0%
TTGATACTTGGCATCTTTAT+AGG - Chr7:72127929-72127948 MsG0780040023.01.T01:intron 30.0%
! AACTTTTACAGATGCAGTTA+AGG - Chr7:72123358-72123377 MsG0780040023.01.T01:intron 30.0%
! AATATAGCATGAGAAAGTGT+AGG + Chr7:72123560-72123579 None:intergenic 30.0%
! ATCATGTCTAGAATGAATCT+TGG + Chr7:72127833-72127852 None:intergenic 30.0%
! CCCAAAAGTTAGCTTATTAA+AGG + Chr7:72127737-72127756 None:intergenic 30.0%
! GATCTAAGTTCTGATCAAAA+TGG + Chr7:72123868-72123887 None:intergenic 30.0%
! GTTAGCTTATTAAAGGATGA+AGG + Chr7:72127730-72127749 None:intergenic 30.0%
! TACAAAAGCATGTTGATTGT+GGG + Chr7:72124699-72124718 None:intergenic 30.0%
! TCATGTCTAGAATGAATCTT+GGG + Chr7:72127832-72127851 None:intergenic 30.0%
! TGATCTTGACATTTTCCTAA+TGG + Chr7:72124857-72124876 None:intergenic 30.0%
! TGCATTTTACCTGGATTTAA+TGG - Chr7:72128349-72128368 MsG0780040023.01.T01:intron 30.0%
! TTAGTGGCTTGGAATAAATT+TGG + Chr7:72127265-72127284 None:intergenic 30.0%
! TTTTAGATGAGAGAGAATGT+TGG + Chr7:72124504-72124523 None:intergenic 30.0%
!! TGATATTGAGTTTGTTGACA+AGG - Chr7:72123904-72123923 MsG0780040023.01.T01:intron 30.0%
!! TTAGAGCTTCTTTGAAACTA+TGG - Chr7:72127191-72127210 MsG0780040023.01.T01:intron 30.0%
!! TTTGATGAATTTGTTGGAGA+CGG + Chr7:72122493-72122512 None:intergenic 30.0%
!!! GGTTTGGTTTTGAATTCAAA+TGG + Chr7:72122546-72122565 None:intergenic 30.0%
!!! TGACAATTTTGCTGTTGTTT+CGG + Chr7:72128884-72128903 None:intergenic 30.0%
AAAAAAAAAGTGACGCTACG+GGG - Chr7:72126058-72126077 MsG0780040023.01.T01:intron 35.0%
AAAACGTCCATATGTATGCA+TGG - Chr7:72129645-72129664 MsG0780040023.01.T01:intron 35.0%
AAAGGGACCTTTACATATTC+AGG - Chr7:72129200-72129219 MsG0780040023.01.T01:intron 35.0%
AACTCTAATCAACCACATTG+GGG - Chr7:72124565-72124584 MsG0780040023.01.T01:intron 35.0%
AACTTCTTCACGTGTCTTAA+TGG + Chr7:72124967-72124986 None:intergenic 35.0%
AAGAGATCCATGCATACATA+TGG + Chr7:72129655-72129674 None:intergenic 35.0%
AATGGGATTATGCAAGGTTT+AGG - Chr7:72122720-72122739 MsG0780040023.01.T01:CDS 35.0%
ACAACTCTAATCAACCACAT+TGG - Chr7:72124563-72124582 MsG0780040023.01.T01:intron 35.0%
ACAGGTTTGAATGCAACTAA+TGG - Chr7:72128313-72128332 MsG0780040023.01.T01:intron 35.0%
ACCTTAAAGAGAGATAACTC+GGG + Chr7:72127060-72127079 None:intergenic 35.0%
ACGAACTCATCATAAGAACA+TGG + Chr7:72130130-72130149 None:intergenic 35.0%
ACGAGCGAGTAAATTATGAT+GGG + Chr7:72127441-72127460 None:intergenic 35.0%
AGACACGTGAAGAAGTTAAA+AGG - Chr7:72124970-72124989 MsG0780040023.01.T01:intron 35.0%
AGCTTCAATTCGAAATCTAC+TGG + Chr7:72129563-72129582 None:intergenic 35.0%
AGCTTGTGCATTAAACTTTG+AGG - Chr7:72129588-72129607 MsG0780040023.01.T01:intron 35.0%
AGGAAGATTGCTGATAAATG+TGG - Chr7:72122740-72122759 MsG0780040023.01.T01:CDS 35.0%
AGTATCGTAAATTAGTGGCT+TGG + Chr7:72127276-72127295 None:intergenic 35.0%
AGTGACGAGACAGTAAAAAA+AGG - Chr7:72124935-72124954 MsG0780040023.01.T01:intron 35.0%
AGTGTACACCCATATATATG+GGG - Chr7:72128563-72128582 MsG0780040023.01.T01:CDS 35.0%
ATAGCTCTTAAAATCGTGGT+GGG - Chr7:72125913-72125932 MsG0780040023.01.T01:intron 35.0%
ATATGACAACATACGAGGTT+AGG + Chr7:72123808-72123827 None:intergenic 35.0%
ATCCATTTATCCTCGTCTTA+CGG - Chr7:72129618-72129637 MsG0780040023.01.T01:intron 35.0%
ATCTACATATATGGAACGAG+AGG + Chr7:72128466-72128485 None:intergenic 35.0%
ATCTGAGAACAATAGCAATG+TGG + Chr7:72127688-72127707 None:intergenic 35.0%
ATGCCGAAGATACTTATTTG+TGG - Chr7:72122677-72122696 MsG0780040023.01.T01:CDS 35.0%
ATTAAGAAGCTTGTGCTCAA+GGG - Chr7:72128106-72128125 MsG0780040023.01.T01:intron 35.0%
ATTATAGATGGAACCCAAGA+AGG - Chr7:72126822-72126841 MsG0780040023.01.T01:intron 35.0%
CAACTCTAATCAACCACATT+GGG - Chr7:72124564-72124583 MsG0780040023.01.T01:intron 35.0%
CACAAGATCAGTATAAAGCA+TGG + Chr7:72130088-72130107 None:intergenic 35.0%
CAGTATAAAGCATGGAAGAA+AGG + Chr7:72130080-72130099 None:intergenic 35.0%
CATGCTTTATACTGATCTTG+TGG - Chr7:72130086-72130105 MsG0780040023.01.T01:CDS 35.0%
CCAAGAAGGTTCTTATATGT+GGG - Chr7:72126836-72126855 MsG0780040023.01.T01:intron 35.0%
CCACATATAAGAACCTTCTT+GGG + Chr7:72126838-72126857 None:intergenic 35.0%
CCACCACAAATAAGTATCTT+CGG + Chr7:72122683-72122702 None:intergenic 35.0%
CCTCAACAAGAAATTACAGT+GGG - Chr7:72129852-72129871 MsG0780040023.01.T01:intron 35.0%
CTCAACAAGAAATTACAGTG+GGG - Chr7:72129853-72129872 MsG0780040023.01.T01:intron 35.0%
GAAATGTGATGAGTGTGATT+AGG + Chr7:72123697-72123716 None:intergenic 35.0%
GAACAAGATGAAGTTGTTGA+TGG - Chr7:72122640-72122659 MsG0780040023.01.T01:three_prime_UTR 35.0%
GACCCATTTGATGAATTTGT+TGG + Chr7:72122499-72122518 None:intergenic 35.0%
GACGAGCTGAAATATTTCAA+CGG - Chr7:72129994-72130013 MsG0780040023.01.T01:intron 35.0%
GGTGACAGTTAACTATGTAT+TGG - Chr7:72127950-72127969 MsG0780040023.01.T01:intron 35.0%
GGTGTCTAATATCAATTGTG+TGG - Chr7:72127553-72127572 MsG0780040023.01.T01:intron 35.0%
GTCAATAAACATAGTCGTGT+TGG - Chr7:72126178-72126197 MsG0780040023.01.T01:intron 35.0%
GTCAGCAACCTCTTAATATT+AGG + Chr7:72124748-72124767 None:intergenic 35.0%
GTGACGAGACAGTAAAAAAA+GGG - Chr7:72124936-72124955 MsG0780040023.01.T01:intron 35.0%
TACGAGCGAGTAAATTATGA+TGG + Chr7:72127442-72127461 None:intergenic 35.0%
TATAGCTCTTAAAATCGTGG+TGG - Chr7:72125912-72125931 MsG0780040023.01.T01:intron 35.0%
TATGACAACATACGAGGTTA+GGG + Chr7:72123807-72123826 None:intergenic 35.0%
TATGCGTACACTTCTTAAGT+AGG + Chr7:72123481-72123500 None:intergenic 35.0%
TATTAAGAAGCTTGTGCTCA+AGG - Chr7:72128105-72128124 MsG0780040023.01.T01:intron 35.0%
TATTGTTAAGAGTCCCACAT+CGG + Chr7:72126016-72126035 None:intergenic 35.0%
TATTTCAGTGTCTTTGCCTT+TGG - Chr7:72124400-72124419 MsG0780040023.01.T01:intron 35.0%
TCCTCAACAAGAAATTACAG+TGG - Chr7:72129851-72129870 MsG0780040023.01.T01:intron 35.0%
TCTGATCAAAATGGTAGACA+TGG + Chr7:72123859-72123878 None:intergenic 35.0%
TGACGAGACAGTAAAAAAAG+GGG - Chr7:72124937-72124956 MsG0780040023.01.T01:intron 35.0%
TGCTGAAAAGATATTGCAAG+CGG - Chr7:72126640-72126659 MsG0780040023.01.T01:intron 35.0%
TGTTATCGAAAATAAGAGGC+AGG + Chr7:72128428-72128447 None:intergenic 35.0%
TTAGAGAATGGGATTATGCA+AGG - Chr7:72122714-72122733 MsG0780040023.01.T01:CDS 35.0%
TTAGAGTTGTAAACCTCGTT+CGG + Chr7:72124553-72124572 None:intergenic 35.0%
TTCTTTGCAATCGTCAAAGT+TGG + Chr7:72129261-72129280 None:intergenic 35.0%
TTGCTTACAAAACTCTTTCG+TGG - Chr7:72126091-72126110 MsG0780040023.01.T01:intron 35.0%
TTTACCTCTTTCTCTCTCAA+GGG + Chr7:72128594-72128613 None:intergenic 35.0%
! AAGGTAGGAGTCCTAATTTT+AGG - Chr7:72127075-72127094 MsG0780040023.01.T01:intron 35.0%
! ACTTTTGGTGGAATATGGAA+TGG - Chr7:72129331-72129350 MsG0780040023.01.T01:intron 35.0%
! AGTATTTTACATCTTCAGCC+AGG + Chr7:72129407-72129426 None:intergenic 35.0%
! CTACAAAAGCATGTTGATTG+TGG + Chr7:72124700-72124719 None:intergenic 35.0%
! GAGCAAGTATCGTAAATTAG+TGG + Chr7:72127281-72127300 None:intergenic 35.0%
! GTATTTGCGTTTGACACTTT+TGG - Chr7:72124719-72124738 MsG0780040023.01.T01:intron 35.0%
! TCTTAACTCTATTTGTTGGC+AGG - Chr7:72129822-72129841 MsG0780040023.01.T01:intron 35.0%
! TCTTTCGTGGCATTGAATTT+GGG - Chr7:72126104-72126123 MsG0780040023.01.T01:intron 35.0%
! TTACATCATGGGCTGTTATT+TGG - Chr7:72124288-72124307 MsG0780040023.01.T01:intron 35.0%
! TTTTACCTCTTTCTCTCTCA+AGG + Chr7:72128595-72128614 None:intergenic 35.0%
!! GAGTTATCTCTCTTTAAGGT+AGG - Chr7:72127060-72127079 MsG0780040023.01.T01:intron 35.0%
!! TTTGTTATTGGCATGCTTGA+TGG + Chr7:72129154-72129173 None:intergenic 35.0%
!!! AGTGATTTTGCTGCTTTTTC+AGG + Chr7:72124047-72124066 None:intergenic 35.0%
!!! CGTAGCGTCACTTTTTTTTT+TGG + Chr7:72126058-72126077 None:intergenic 35.0%
!!! GTTTTTTCCAAGATATTGGG+AGG + Chr7:72123747-72123766 None:intergenic 35.0%
AAAAACACCAAGGACACCAA+AGG + Chr7:72124419-72124438 None:intergenic 40.0%
AAAATGGTAGACATGGACAC+GGG + Chr7:72123852-72123871 None:intergenic 40.0%
AAACTAGCTACTAGTGGTAG+AGG + Chr7:72123617-72123636 None:intergenic 40.0%
AAAGTTGGAGCCAGAAAGAA+GGG + Chr7:72129246-72129265 None:intergenic 40.0%
AACCAAACCCTTCTCTTTCA+TGG - Chr7:72122557-72122576 MsG0780040023.01.T01:three_prime_UTR 40.0%
AATAAAAAGGGCCAGCCATT+AGG - Chr7:72124839-72124858 MsG0780040023.01.T01:intron 40.0%
AATATTAATGCAGGCAACCG+CGG - Chr7:72126592-72126611 MsG0780040023.01.T01:intron 40.0%
AATGCTCCTAAAGTTGCTGA+TGG - Chr7:72128070-72128089 MsG0780040023.01.T01:intron 40.0%
ACAATGGGAGTAATTGACCT+TGG - Chr7:72127998-72128017 MsG0780040023.01.T01:intron 40.0%
ACTCATCATAAGAACATGGC+TGG + Chr7:72130126-72130145 None:intergenic 40.0%
ACTGGATGAAGCATGGAATT+AGG + Chr7:72129545-72129564 None:intergenic 40.0%
AGGGGTAAACCCCATATATA+TGG + Chr7:72128575-72128594 None:intergenic 40.0%
AGTAAACGCCATGAAAGAGA+AGG + Chr7:72122568-72122587 None:intergenic 40.0%
ATATTTGATGCTGGTAGCAC+TGG - Chr7:72123824-72123843 MsG0780040023.01.T01:intron 40.0%
CAAAATGGTAGACATGGACA+CGG + Chr7:72123853-72123872 None:intergenic 40.0%
CAAACACAACAGAGATTTCG+AGG + Chr7:72126140-72126159 None:intergenic 40.0%
CATTCTAGACATGATGGTAG+TGG - Chr7:72127838-72127857 MsG0780040023.01.T01:intron 40.0%
CCCAAGAAGGTTCTTATATG+TGG - Chr7:72126835-72126854 MsG0780040023.01.T01:intron 40.0%
CCCACATATAAGAACCTTCT+TGG + Chr7:72126839-72126858 None:intergenic 40.0%
CCCACTGTAATTTCTTGTTG+AGG + Chr7:72129855-72129874 None:intergenic 40.0%
CCGAAGATACTTATTTGTGG+TGG - Chr7:72122680-72122699 MsG0780040023.01.T01:CDS 40.0%
CCTCTAATTGCTCAATCGAT+CGG + Chr7:72127406-72127425 None:intergenic 40.0%
CGATCGATTGAGCAATTAGA+GGG - Chr7:72127404-72127423 MsG0780040023.01.T01:intron 40.0%
CTCCACTCCTGAATATGTAA+AGG + Chr7:72129210-72129229 None:intergenic 40.0%
CTCTAATTGCTCAATCGATC+GGG + Chr7:72127405-72127424 None:intergenic 40.0%
CTTGTAGTTACTTGCGCTTT+GGG - Chr7:72128272-72128291 MsG0780040023.01.T01:intron 40.0%
GAAATCTACTGGATGAAGCA+TGG + Chr7:72129552-72129571 None:intergenic 40.0%
GACCTTTACATATTCAGGAG+TGG - Chr7:72129205-72129224 MsG0780040023.01.T01:intron 40.0%
GGGGTAAACCCCATATATAT+GGG + Chr7:72128574-72128593 None:intergenic 40.0%
GTAAACGCCATGAAAGAGAA+GGG + Chr7:72122567-72122586 None:intergenic 40.0%
GTCAATAAACATAGCCGTGT+TGG - Chr7:72126363-72126382 MsG0780040023.01.T01:intron 40.0%
GTTTACACCTAAAAAACGCC+CGG - Chr7:72127370-72127389 MsG0780040023.01.T01:intron 40.0%
TAAATTGACTAGCGTTTCCG+AGG + Chr7:72123333-72123352 None:intergenic 40.0%
TAGAGTTGTAAACCTCGTTC+GGG + Chr7:72124552-72124571 None:intergenic 40.0%
TCTTGTAGTTACTTGCGCTT+TGG - Chr7:72128271-72128290 MsG0780040023.01.T01:intron 40.0%
TGATTGAATAGTCCCCAATG+TGG + Chr7:72124580-72124599 None:intergenic 40.0%
TTAAGTATAAGTGGCCCATC+TGG - Chr7:72127034-72127053 MsG0780040023.01.T01:intron 40.0%
TTACCTCTTTCTCTCTCAAG+GGG + Chr7:72128593-72128612 None:intergenic 40.0%
TTATGCCCTTGTAACGTTGT+GGG - Chr7:72126217-72126236 MsG0780040023.01.T01:intron 40.0%
TTCACTACTTTCACACTTGC+AGG + Chr7:72123078-72123097 None:intergenic 40.0%
TTTACACCTAAAAAACGCCC+GGG - Chr7:72127371-72127390 MsG0780040023.01.T01:intron 40.0%
TTTGATCGGAAGTTACAACC+TGG - Chr7:72127342-72127361 MsG0780040023.01.T01:intron 40.0%
TTTGGTGGAATATGGAATGG+TGG - Chr7:72129334-72129353 MsG0780040023.01.T01:intron 40.0%
! AGGGCATAAGTTTTTCCGAA+AGG + Chr7:72126206-72126225 None:intergenic 40.0%
! ATTCCACCAAAAGTGCAACT+CGG + Chr7:72129325-72129344 None:intergenic 40.0%
! CTCTTTCGTGGCATTGAATT+TGG - Chr7:72126103-72126122 MsG0780040023.01.T01:intron 40.0%
! CTTGACATTTTCCTAATGGC+TGG + Chr7:72124853-72124872 None:intergenic 40.0%
! GCTTGCAATATCTTTTCAGC+AGG + Chr7:72126641-72126660 None:intergenic 40.0%
! GGCATAAGTTTTTCCGAAAG+GGG + Chr7:72126204-72126223 None:intergenic 40.0%
! GGGCATAAGTTTTTCCGAAA+GGG + Chr7:72126205-72126224 None:intergenic 40.0%
! GTTGCACTTTTGGTGGAATA+TGG - Chr7:72129326-72129345 MsG0780040023.01.T01:intron 40.0%
!! ACCAAACGGACTAGCAAATT+TGG + Chr7:72127488-72127507 None:intergenic 40.0%
!! GAAGTTGTTGATGGTGAAAG+TGG - Chr7:72122649-72122668 MsG0780040023.01.T01:three_prime_UTR 40.0%
!! TAGCTTTTTCCCCTTCTTTC+TGG - Chr7:72129233-72129252 MsG0780040023.01.T01:intron 40.0%
!!! AGCGAGTTCATTTTTCGAGA+AGG + Chr7:72126391-72126410 None:intergenic 40.0%
!!! AGGCACAAGTTTTTTCGAGA+AGG + Chr7:72126298-72126317 None:intergenic 40.0%
!!! AGGTTAGGGCTTCTTGTTTT+GGG + Chr7:72123793-72123812 None:intergenic 40.0%
!!! GCGAGTTCATTTTTCGAGAA+GGG + Chr7:72126390-72126409 None:intergenic 40.0%
!!! GGCACAAGTTTTTTCGAGAA+GGG + Chr7:72126297-72126316 None:intergenic 40.0%
!!! TCTCTCCGGAATGACTTTTT+TGG - Chr7:72125347-72125366 MsG0780040023.01.T01:intron 40.0%
!!! TTTTGGAGTGCAGATCTTCA+GGG + Chr7:72124103-72124122 None:intergenic 40.0%
AAAAACTCACCCCAAGCCTA+AGG + Chr7:72124130-72124149 None:intergenic 45.0%
AAAACTCACCCCAAGCCTAA+GGG + Chr7:72124129-72124148 None:intergenic 45.0%
AAGTTGGAGCCAGAAAGAAG+GGG + Chr7:72129245-72129264 None:intergenic 45.0%
ACAAACCAGCTTGTGAGATG+AGG - Chr7:72125950-72125969 MsG0780040023.01.T01:intron 45.0%
ACAAGAAATTACAGTGGGGC+AGG - Chr7:72129857-72129876 MsG0780040023.01.T01:intron 45.0%
AGACTATCACCTATCCGATG+TGG - Chr7:72125999-72126018 MsG0780040023.01.T01:CDS 45.0%
AGAGTTGTAAACCTCGTTCG+GGG + Chr7:72124551-72124570 None:intergenic 45.0%
AGCTCATAGCAGAGGATACA+TGG - Chr7:72127461-72127480 MsG0780040023.01.T01:intron 45.0%
ATAGTCCGAGAATAGCAACG+TGG + Chr7:72127888-72127907 None:intergenic 45.0%
ATAGTCGTGTTGTCCCCTTT+CGG - Chr7:72126188-72126207 MsG0780040023.01.T01:intron 45.0%
ATATTAATGCAGGCAACCGC+GGG - Chr7:72126593-72126612 MsG0780040023.01.T01:intron 45.0%
ATCCAAAAGCCTTAAACCCG+CGG + Chr7:72126612-72126631 None:intergenic 45.0%
ATCGGAAGTTACAACCTGGT+CGG - Chr7:72127346-72127365 MsG0780040023.01.T01:intron 45.0%
ATGGGAGTAATTGACCTTGG+AGG - Chr7:72128001-72128020 MsG0780040023.01.T01:intron 45.0%
ATTCCGAGGACAAAGTTCCT+CGG - Chr7:72123313-72123332 MsG0780040023.01.T01:intron 45.0%
ATTCTGTTGTGGAAGCTGCA+TGG - Chr7:72129895-72129914 MsG0780040023.01.T01:intron 45.0%
CAAAGTTGGAGCCAGAAAGA+AGG + Chr7:72129247-72129266 None:intergenic 45.0%
CAAGAAATTACAGTGGGGCA+GGG - Chr7:72129858-72129877 MsG0780040023.01.T01:intron 45.0%
CATGAACGAGCAACACATGT+TGG + Chr7:72129681-72129700 None:intergenic 45.0%
CATTTATCCTCGTCTTACGG+AGG - Chr7:72129621-72129640 MsG0780040023.01.T01:intron 45.0%
CATTTGCTTACTTGCAGTGC+AGG - Chr7:72126248-72126267 MsG0780040023.01.T01:intron 45.0%
CCGATCGATTGAGCAATTAG+AGG - Chr7:72127403-72127422 MsG0780040023.01.T01:intron 45.0%
CTCCGTAAGACGAGGATAAA+TGG + Chr7:72129623-72129642 None:intergenic 45.0%
CTCTCTTCCTCCCAATATCT+TGG - Chr7:72123737-72123756 MsG0780040023.01.T01:intron 45.0%
CTTATGCCCTTGTAACGTTG+TGG - Chr7:72126216-72126235 MsG0780040023.01.T01:intron 45.0%
CTTGTGCCTTTGTAATGCTG+CGG - Chr7:72126309-72126328 MsG0780040023.01.T01:intron 45.0%
GACTATCACCTATCCGATGT+GGG - Chr7:72126000-72126019 MsG0780040023.01.T01:CDS 45.0%
GCCCGAGTTATCTCTCTTTA+AGG - Chr7:72127056-72127075 MsG0780040023.01.T01:intron 45.0%
GCTCATAGCAGAGGATACAT+GGG - Chr7:72127462-72127481 MsG0780040023.01.T01:intron 45.0%
TACTTCAGCTTTCGCTTACC+TGG - Chr7:72129386-72129405 MsG0780040023.01.T01:intron 45.0%
TAGTCCGAGAATAGCAACGT+GGG + Chr7:72127887-72127906 None:intergenic 45.0%
TATGCCCTTGTAACGTTGTG+GGG - Chr7:72126218-72126237 MsG0780040023.01.T01:intron 45.0%
TCTTCACGTGTCTTAATGGC+TGG + Chr7:72124963-72124982 None:intergenic 45.0%
TTAAGAGTCCCACATCGGAT+AGG + Chr7:72126011-72126030 None:intergenic 45.0%
TTACCCCTTGAGAGAGAAAG+AGG - Chr7:72128587-72128606 MsG0780040023.01.T01:CDS 45.0%
TTGTGCCTTTGTAATGCTGC+GGG - Chr7:72126310-72126329 MsG0780040023.01.T01:intron 45.0%
TTTAGGTGTAAACTCCGACC+AGG + Chr7:72127363-72127382 None:intergenic 45.0%
TTTCCGAGGAACTTTGTCCT+CGG + Chr7:72123319-72123338 None:intergenic 45.0%
TTTGAACTGAACCACCTCCA+AGG + Chr7:72128018-72128037 None:intergenic 45.0%
! ACCAAAAGTGCAACTCGGAT+AGG + Chr7:72129320-72129339 None:intergenic 45.0%
! CAACATGTGTTGCTCGTTCA+TGG - Chr7:72129679-72129698 MsG0780040023.01.T01:intron 45.0%
! CCAAAAGTGCAACTCGGATA+GGG + Chr7:72129319-72129338 None:intergenic 45.0%
! CGTTGCTATTCTCGGACTAT+TGG - Chr7:72127888-72127907 MsG0780040023.01.T01:intron 45.0%
! CTCTCTGCTTCTTCTAGAAG+TGG + Chr7:72124074-72124093 None:intergenic 45.0%
! GAATATGGAATGGTGGAGGA+GGG - Chr7:72129341-72129360 MsG0780040023.01.T01:intron 45.0%
! GCTAACCCTTGCATTTTACC+TGG - Chr7:72128340-72128359 MsG0780040023.01.T01:intron 45.0%
! GTGTTGCTCGTTCATGGATT+TGG - Chr7:72129685-72129704 MsG0780040023.01.T01:intron 45.0%
! GTTTTATGAGCACTCACGAG+AGG - Chr7:72124374-72124393 MsG0780040023.01.T01:intron 45.0%
! TATCCGAGTTGCACTTTTGG+TGG - Chr7:72129319-72129338 MsG0780040023.01.T01:intron 45.0%
! TGCTCGTTCATGGATTTGGT+AGG - Chr7:72129689-72129708 MsG0780040023.01.T01:intron 45.0%
!! ATCTCACAAGCTGGTTTGTG+TGG + Chr7:72125949-72125968 None:intergenic 45.0%
!! CGGGTTTAAGGCTTTTGGAT+GGG - Chr7:72126612-72126631 MsG0780040023.01.T01:intron 45.0%
!! GAGGTTAGGGCTTCTTGTTT+TGG + Chr7:72123794-72123813 None:intergenic 45.0%
!! GCCAAATTTGCTAGTCCGTT+TGG - Chr7:72127484-72127503 MsG0780040023.01.T01:intron 45.0%
!! GGGTTTAAGGCTTTTGGATG+GGG - Chr7:72126613-72126632 MsG0780040023.01.T01:intron 45.0%
!! TTTGAGTTGAGTTGCAGTGC+AGG - Chr7:72126156-72126175 MsG0780040023.01.T01:intron 45.0%
!! TTTTCGAGAAGGGACCAACA+CGG + Chr7:72126287-72126306 None:intergenic 45.0%
!!! GTTTTGGAGTGCAGATCTTC+AGG + Chr7:72124104-72124123 None:intergenic 45.0%
!! TAAATTAAATTAAATAAAAG+TGG - Chr7:72130040-72130059 MsG0780040023.01.T01:CDS 5.0%
!!! TGTTTAATTTTTTTTTTTTT+AGG - Chr7:72129496-72129515 MsG0780040023.01.T01:intron 5.0%
!!! TTTTTATTTATTTTTTTAAG+AGG + Chr7:72124770-72124789 None:intergenic 5.0%
AAACTCACCCCAAGCCTAAG+GGG + Chr7:72124128-72124147 None:intergenic 50.0%
ACCAGGTTTGAGTGCATACG+CGG - Chr7:72124016-72124035 MsG0780040023.01.T01:intron 50.0%
ACCTCGTTCGGGGAAATACT+TGG + Chr7:72124541-72124560 None:intergenic 50.0%
AGAGATAACTCGGGCCAGAT+GGG + Chr7:72127051-72127070 None:intergenic 50.0%
CAAAACACCCCTTAGGCTTG+GGG - Chr7:72124118-72124137 MsG0780040023.01.T01:intron 50.0%
CAAAGAAGCAACTCGAGCAC+AGG - Chr7:72128295-72128314 MsG0780040023.01.T01:intron 50.0%
CCAAAACACCCCTTAGGCTT+GGG - Chr7:72124117-72124136 MsG0780040023.01.T01:intron 50.0%
CCTCGTTCGGGGAAATACTT+GGG + Chr7:72124540-72124559 None:intergenic 50.0%
CGCCATGAAAGAGAAGGGTT+TGG + Chr7:72122562-72122581 None:intergenic 50.0%
GCAATCCTCATCTCACAAGC+TGG + Chr7:72125958-72125977 None:intergenic 50.0%
GGAGTAATTGACCTTGGAGG+TGG - Chr7:72128004-72128023 MsG0780040023.01.T01:intron 50.0%
GGTCATGAACGGACATCACT+AGG + Chr7:72127607-72127626 None:intergenic 50.0%
GGTGGAATATGGAATGGTGG+AGG - Chr7:72129337-72129356 MsG0780040023.01.T01:intron 50.0%
TATTGGGAGGAAGAGAGAGC+AGG + Chr7:72123734-72123753 None:intergenic 50.0%
TCCAAAACACCCCTTAGGCT+TGG - Chr7:72124116-72124135 MsG0780040023.01.T01:intron 50.0%
TCCTCGCCATCAGCAACTTT+AGG + Chr7:72128079-72128098 None:intergenic 50.0%
TGCACTCCAAAACACCCCTT+AGG - Chr7:72124111-72124130 MsG0780040023.01.T01:intron 50.0%
TGTGCCTTTGTAATGCTGCG+GGG - Chr7:72126311-72126330 MsG0780040023.01.T01:intron 50.0%
! CCCTATCCGAGTTGCACTTT+TGG - Chr7:72129316-72129335 MsG0780040023.01.T01:intron 50.0%
! GAGTCCCACGTTGCTATTCT+CGG - Chr7:72127880-72127899 MsG0780040023.01.T01:intron 50.0%
! GGAATATGGAATGGTGGAGG+AGG - Chr7:72129340-72129359 MsG0780040023.01.T01:intron 50.0%
! TCCTAAAGTTGCTGATGGCG+AGG - Chr7:72128075-72128094 MsG0780040023.01.T01:intron 50.0%
!! AACCGCGGGTTTAAGGCTTT+TGG - Chr7:72126607-72126626 MsG0780040023.01.T01:intron 50.0%
!! GCGGGTTTAAGGCTTTTGGA+TGG - Chr7:72126611-72126630 MsG0780040023.01.T01:intron 50.0%
!! GTCTTTGCCTTTGGTGTCCT+TGG - Chr7:72124409-72124428 MsG0780040023.01.T01:intron 50.0%
!!! GTAAGTCCCGGGCGTTTTTT+AGG + Chr7:72127380-72127399 None:intergenic 50.0%
AGTCGCCCCACAACGTTACA+AGG + Chr7:72126226-72126245 None:intergenic 55.0%
ATCGATCGGGTCGTAAGTCC+CGG + Chr7:72127392-72127411 None:intergenic 55.0%
CCCAAGTATTTCCCCGAACG+AGG - Chr7:72124537-72124556 MsG0780040023.01.T01:intron 55.0%
GAGAGATAACTCGGGCCAGA+TGG + Chr7:72127052-72127071 None:intergenic 55.0%
GCTTCCACAGCAGTACCTAG+AGG + Chr7:72129921-72129940 None:intergenic 55.0%
GTCGCCCCACAACGTTACAA+GGG + Chr7:72126225-72126244 None:intergenic 55.0%
GTGCAACTCGGATAGGGACA+TGG + Chr7:72129313-72129332 None:intergenic 55.0%
TCCGCGTATGCACTCAAACC+TGG + Chr7:72124020-72124039 None:intergenic 55.0%
TCGCTCGTAGCTCATAGCAG+AGG - Chr7:72127453-72127472 MsG0780040023.01.T01:intron 55.0%
! ATGGCCTCTAGGTACTGCTG+TGG - Chr7:72129914-72129933 MsG0780040023.01.T01:intron 55.0%
! CGTTTTGCCTCCGTAAGACG+AGG + Chr7:72129631-72129650 None:intergenic 55.0%
!!! CCCAAGCCTAAGGGGTGTTT+TGG + Chr7:72124120-72124139 None:intergenic 55.0%
GTCGCCCCGCAGCATTACAA+AGG + Chr7:72126318-72126337 None:intergenic 60.0%
GTGGAAGCTGCATGGCCTCT+AGG - Chr7:72129903-72129922 MsG0780040023.01.T01:intron 60.0%
TCGATCGGGTCGTAAGTCCC+GGG + Chr7:72127391-72127410 None:intergenic 60.0%
TGCAGGCAACCGCGGGTTTA+AGG - Chr7:72126600-72126619 MsG0780040023.01.T01:intron 60.0%
! TGGAATGGTGGAGGAGGGAG+TGG - Chr7:72129346-72129365 MsG0780040023.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 72122487 72130170 72122487 ID=MsG0780040023.01;Name=MsG0780040023.01
Chr7 mRNA 72122487 72130170 72122487 ID=MsG0780040023.01.T01;Parent=MsG0780040023.01;Name=MsG0780040023.01.T01;_AED=0.53;_eAED=0.53;_QI=0|0.71|0.5|0.87|0.85|0.75|8|184|378
Chr7 exon 72129996 72130170 72129996 ID=MsG0780040023.01.T01:exon:34925;Parent=MsG0780040023.01.T01
Chr7 exon 72128732 72129075 72128732 ID=MsG0780040023.01.T01:exon:34926;Parent=MsG0780040023.01.T01
Chr7 exon 72128518 72128646 72128518 ID=MsG0780040023.01.T01:exon:34927;Parent=MsG0780040023.01.T01
Chr7 exon 72125996 72126052 72125996 ID=MsG0780040023.01.T01:exon:34928;Parent=MsG0780040023.01.T01
Chr7 exon 72125800 72125892 72125800 ID=MsG0780040023.01.T01:exon:34929;Parent=MsG0780040023.01.T01
Chr7 exon 72124651 72124706 72124651 ID=MsG0780040023.01.T01:exon:34930;Parent=MsG0780040023.01.T01
Chr7 exon 72122951 72123090 72122951 ID=MsG0780040023.01.T01:exon:34931;Parent=MsG0780040023.01.T01
Chr7 exon 72122487 72122813 72122487 ID=MsG0780040023.01.T01:exon:34932;Parent=MsG0780040023.01.T01
Chr7 CDS 72129996 72130170 72129996 ID=MsG0780040023.01.T01:cds;Parent=MsG0780040023.01.T01
Chr7 CDS 72128732 72129075 72128732 ID=MsG0780040023.01.T01:cds;Parent=MsG0780040023.01.T01
Chr7 CDS 72128518 72128646 72128518 ID=MsG0780040023.01.T01:cds;Parent=MsG0780040023.01.T01
Chr7 CDS 72125996 72126052 72125996 ID=MsG0780040023.01.T01:cds;Parent=MsG0780040023.01.T01
Chr7 CDS 72125800 72125892 72125800 ID=MsG0780040023.01.T01:cds;Parent=MsG0780040023.01.T01
Chr7 CDS 72124651 72124706 72124651 ID=MsG0780040023.01.T01:cds;Parent=MsG0780040023.01.T01
Chr7 CDS 72122951 72123090 72122951 ID=MsG0780040023.01.T01:cds;Parent=MsG0780040023.01.T01
Chr7 CDS 72122671 72122813 72122671 ID=MsG0780040023.01.T01:cds;Parent=MsG0780040023.01.T01
Chr7 three_prime_UTR 72122487 72122670 72122487 ID=MsG0780040023.01.T01:three_prime_utr;Parent=MsG0780040023.01.T01
Gene Sequence

>MsG0780040023.01.T01

ATGCCGTCTCCAACAAATTCATCAAATGGGTCACTCACCGATAACTCTTTTTCATTCCATTTGAATTCAAAACCAAACCCTTCTCTTTCATGGCGTTTACTTCATGAAAAACCAGACAACAATGTTCATGTTAATATTAATCTCATAAAACAAGAACAAGATGAAGTTGTTGATGTGAGAACTGAGCATGACAGTTCTTCTCAAGTTCCTCTACCACTAGTAGCTAGTTTAATTGAGACTAGTTTCAAAATGGTTTTGCTTTTGCAAAAGACTAAGAGCATGAACTTCCTAATCACACTCATCACATTTCTACTCTTCTTAAATCCTGCTCTCTCTTCCTCCCAATATCTTGGAAAAAACATACTCACTAATCGAAAGATTTTCCCAAAACAAGAAGCCCTAACCTCGTATGTTGTCATATTTGATGCTGGTAGCACTGGTACCCGTGTCCATGTCTACCATTTTGATCAGAACTTAGATCTACTTCACATTGACAATGATATTGAGTTTGTTGACAAGATCAAACCAGGTTTGAGTGCATACGCGGATAATCCTGAAAAAGCAGCAAAATCACTTGTTCCACTTCTAGAAGAAGCAGAGAGTGTAGTCCCTGAAGATCTGCACTCCAAAACACCCCTTAGGCTTGGGGCAACCGCGGGTTTAAGGCTTTTGGATGGGGATCCTGCTGAAAAGATATTGCAAGCGGTAAGGGATATGTTCAGCAACAGAAGTACTCTCAACGTTCAAGCTGATGCAGTTTCAATTATAGATGGAACCCAAGAAGGTTCTTATATGTGGGTGACAGTTAACTATGTATTGGGGAATTGGGAAAAAGCTTCACAAACACAATGGGAATTTCGAATTGAAGCTAAGCGAGCTTGTGCATTAAACTTTGAGGATGTCAAATCCATTTATCCTCGTCTTACGGAGGCAAAACGTCCATATGTATGCATGGATCTCTTATACCAACATGTGTTGCTCGTTCATGGATTTGGCTTAGATCCTCAACAAGAAATTACAGTGGGGCAGGGAATTCAATATCAGAATTCTGTTGTGGAAGCTGCATGGCCTCTAGGTACTGCTGTGGAAGCTATATCAGCATTACCTAAATTTGAGAGATTAATGTATTTTATTTAG

Protein sequence

>MsG0780040023.01.T01

MPSPTNSSNGSLTDNSFSFHLNSKPNPSLSWRLLHEKPDNNVHVNINLIKQEQDEVVDVRTEHDSSSQVPLPLVASLIETSFKMVLLLQKTKSMNFLITLITFLLFLNPALSSSQYLGKNILTNRKIFPKQEALTSYVVIFDAGSTGTRVHVYHFDQNLDLLHIDNDIEFVDKIKPGLSAYADNPEKAAKSLVPLLEEAESVVPEDLHSKTPLRLGATAGLRLLDGDPAEKILQAVRDMFSNRSTLNVQADAVSIIDGTQEGSYMWVTVNYVLGNWEKASQTQWEFRIEAKRACALNFEDVKSIYPRLTEAKRPYVCMDLLYQHVLLVHGFGLDPQQEITVGQGIQYQNSVVEAAWPLGTAVEAISALPKFERLMYFI*