AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040415.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040415.01.T01 MTR_7g490350 95.664 369 16 0 1 369 1 369 0.0 729
MsG0780040415.01.T01 MTR_7g090300 86.450 369 50 0 1 369 1 369 0.0 656
MsG0780040415.01.T01 MTR_5g091980 70.718 362 59 3 8 369 9 323 0.0 505
MsG0780040415.01.T01 MTR_7g490330 69.337 362 66 2 8 369 9 325 3.44e-180 503
MsG0780040415.01.T01 MTR_2g087780 47.815 389 169 5 12 369 10 395 1.41e-118 349
MsG0780040415.01.T01 MTR_4g050190 50.147 341 157 6 38 369 55 391 1.01e-113 337
MsG0780040415.01.T01 MTR_2g099030 49.704 338 159 5 36 364 66 401 1.06e-107 322
MsG0780040415.01.T01 MTR_7g090320 46.988 332 163 5 50 368 55 386 5.55e-107 319
MsG0780040415.01.T01 MTR_7g090310 46.970 330 163 5 51 368 56 385 2.38e-106 318
MsG0780040415.01.T01 MTR_4g112670 38.369 331 171 3 44 367 30 334 6.77e-79 246
MsG0780040415.01.T01 MTR_4g112650 35.326 368 194 5 1 363 1 329 3.52e-74 233
MsG0780040415.01.T01 MTR_4g112630 34.400 375 189 6 1 368 1 325 1.10e-72 229
MsG0780040415.01.T01 MTR_2g058450 40.557 323 162 5 52 369 39 336 2.39e-72 229
MsG0780040415.01.T01 MTR_4g112620 32.915 319 151 3 53 368 42 300 2.75e-56 186
MsG0780040415.01.T01 MTR_2g058410 35.039 254 140 3 114 366 1 230 1.69e-44 153
MsG0780040415.01.T01 MTR_8g074270 31.657 338 192 10 5 339 28 329 1.97e-36 136
MsG0780040415.01.T01 MTR_0003s0530 32.692 208 110 2 158 361 2 183 3.25e-36 131
MsG0780040415.01.T01 MTR_8g074170 34.866 261 154 8 22 278 34 282 5.50e-36 135
MsG0780040415.01.T01 MTR_8g074210 33.333 237 131 5 51 284 76 288 5.24e-33 127
MsG0780040415.01.T01 MTR_2g042370 29.841 315 198 10 63 369 58 357 1.05e-27 112
MsG0780040415.01.T01 MTR_2g042420 26.203 374 244 11 1 369 3 349 1.06e-27 112
MsG0780040415.01.T01 MTR_2g042430 27.476 313 201 8 54 365 77 364 1.54e-27 112
MsG0780040415.01.T01 MTR_4g112840 45.833 96 52 0 185 280 57 152 4.79e-25 100
MsG0780040415.01.T01 MTR_1g075865 39.623 106 63 1 162 267 7 111 1.11e-21 90.1
MsG0780040415.01.T01 MTR_8g074320 37.267 161 87 5 80 236 71 221 1.11e-19 87.0
MsG0780040415.01.T01 MTR_2g058430 39.175 97 57 1 105 199 52 148 2.69e-15 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040415.01.T01 AT3G57030 60.377 371 145 2 1 369 4 374 1.28e-161 457
MsG0780040415.01.T01 AT5G22020 50.689 363 164 6 19 369 36 395 2.05e-123 361
MsG0780040415.01.T01 AT5G22020 50.689 363 164 6 19 369 36 395 2.05e-123 361
MsG0780040415.01.T01 AT5G22020 50.689 363 164 6 19 369 36 395 2.05e-123 361
MsG0780040415.01.T01 AT1G08470 51.558 353 156 7 27 369 42 389 1.56e-119 351
MsG0780040415.01.T01 AT3G57020 48.596 356 171 6 7 359 13 359 3.66e-112 332
MsG0780040415.01.T01 AT3G57010 48.468 359 172 7 5 359 11 360 2.71e-110 327
MsG0780040415.01.T01 AT2G41300 52.581 310 142 3 59 366 84 390 1.03e-109 327
MsG0780040415.01.T01 AT2G41290 50.742 337 153 8 44 369 42 376 4.16e-107 319
MsG0780040415.01.T01 AT3G57020 46.910 356 163 6 7 359 13 345 1.06e-104 312
MsG0780040415.01.T01 AT3G59530 46.828 331 155 5 43 364 74 392 1.01e-98 299
MsG0780040415.01.T01 AT3G59530 46.828 331 155 5 43 364 74 392 1.01e-98 299
MsG0780040415.01.T01 AT3G59530 46.828 331 155 5 43 364 74 392 1.01e-98 299
MsG0780040415.01.T01 AT1G74020 35.977 353 175 7 22 369 21 327 7.09e-66 212
MsG0780040415.01.T01 AT1G74010 35.127 353 177 8 22 369 20 325 1.10e-61 201
MsG0780040415.01.T01 AT1G74000 34.000 350 180 8 25 369 26 329 1.48e-59 196
MsG0780040415.01.T01 AT3G51440 33.333 240 140 6 40 278 56 276 5.18e-30 119
MsG0780040415.01.T01 AT3G51430 29.110 292 169 8 8 280 6 278 2.33e-29 117
MsG0780040415.01.T01 AT3G51430 28.966 290 168 8 8 278 6 276 4.09e-29 116
MsG0780040415.01.T01 AT3G51420 26.613 372 236 10 5 364 10 356 5.67e-29 115
MsG0780040415.01.T01 AT3G51450 29.310 290 168 10 4 278 9 276 5.21e-27 110

Find 111 sgRNAs with CRISPR-Local

Find 271 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAATTCAGAAGGGCAATTT+TGG 0.135114 7:-77209988 MsG0780040415.01.T01:CDS
TGCTGTTCTTCCAGGCTTTC+CGG 0.166671 7:-77210023 MsG0780040415.01.T01:CDS
AATTATCTTTAAACTTAGTT+TGG 0.262527 7:-77209626 MsG0780040415.01.T01:three_prime_UTR
CTTTGCAAAAGGAGTTTCTT+TGG 0.277915 7:+77209952 None:intergenic
CAAAGATGGTTCATTTCTTC+TGG 0.280166 7:-77210119 MsG0780040415.01.T01:CDS
GGAATGGGAAGTGGTGAAAA+AGG 0.294393 7:+77213064 None:intergenic
CCACAAACATGCTCCAATTC+TGG 0.294769 7:+77210978 None:intergenic
CTTCAGCTTCTGTTGCTACC+TGG 0.301557 7:+77210853 None:intergenic
CTTGCAGGATTCTGAGGCTT+TGG 0.326628 7:-77210081 MsG0780040415.01.T01:CDS
TAGCTGAAACTTCGACTTGC+AGG 0.327681 7:-77210096 MsG0780040415.01.T01:CDS
GTATCGACTTGGCCAGCTTT+TGG 0.341303 7:+77210049 None:intergenic
TACTATATTAGTGTTTATAC+TGG 0.367529 7:-77209670 MsG0780040415.01.T01:three_prime_UTR
GCATCCATTTGCACCAGAAT+TGG 0.369415 7:-77210991 MsG0780040415.01.T01:CDS
TCAGTGTTAATGTCTTATAT+TGG 0.379831 7:-77209719 MsG0780040415.01.T01:CDS
TTCAGCTTCTGTTGCTACCT+GGG 0.392053 7:+77210854 None:intergenic
AATTTCACTGATAAACTTCA+AGG 0.392324 7:+77209772 None:intergenic
CAGGCTTTCCGGACAATGTA+AGG 0.397344 7:-77210012 MsG0780040415.01.T01:CDS
TTTATGCTTGTACTTCTTAG+TGG 0.411865 7:-77210238 MsG0780040415.01.T01:CDS
AAGAGAAAGATGGAAAACTT+TGG 0.414332 7:-77209748 MsG0780040415.01.T01:CDS
GAATTTCTCCTTACATTGTC+CGG 0.417842 7:+77210004 None:intergenic
TGCTCCAATTCTGGTGCAAA+TGG 0.427089 7:+77210987 None:intergenic
GGTGTTGCTTTAAACAAAGA+TGG 0.430998 7:-77210133 MsG0780040415.01.T01:CDS
CTTCTTAGTGGGGACAAGAC+TGG 0.432085 7:-77210226 MsG0780040415.01.T01:CDS
ATTCTGAGGCTTTGGCTTCG+TGG 0.437180 7:-77210073 MsG0780040415.01.T01:CDS
AGTGGTGAGGTTACCTTCTC+CGG 0.437187 7:+77210748 None:intergenic
AGGGGAAATATTAGAAGTCT+TGG 0.437484 7:-77209813 MsG0780040415.01.T01:CDS
ACTCTCCGGCCCGACGGCTC+CGG 0.441292 7:+77212997 None:intergenic
TTGCTGTCACCAGTTCCAAT+AGG 0.446183 7:-77212880 MsG0780040415.01.T01:intron
TTGTTTAAAGCAACACCATT+GGG 0.447280 7:+77210139 None:intergenic
CCATCTGCCACACCGGTGTA+AGG 0.451702 7:+77212947 None:intergenic
TTATGCTTGTACTTCTTAGT+GGG 0.451729 7:-77210237 MsG0780040415.01.T01:CDS
GCTATAAAGCTGAGTGATGA+AGG 0.452061 7:-77209833 MsG0780040415.01.T01:CDS
CTCAAAGTAGTAGGACCTGC+AGG 0.452562 7:-77210888 MsG0780040415.01.T01:CDS
CTGCAGGTCCTACTACTTTG+AGG 0.453606 7:+77210889 None:intergenic
TGGCTTCGTGGACCAAAAGC+TGG 0.461384 7:-77210061 MsG0780040415.01.T01:CDS
TGGAGGGTGTTCTTCGATCC+AGG 0.461569 7:+77213043 None:intergenic
CTTACATTGTCCGGAAAGCC+TGG 0.462228 7:+77210013 None:intergenic
CTTCGACTTGCAGGATTCTG+AGG 0.469500 7:-77210087 MsG0780040415.01.T01:CDS
GAAGACATCCACTTTGCAAA+AGG 0.471070 7:+77209941 None:intergenic
TGCTTTACCAGCCCACAGAT+TGG 0.476574 7:+77209919 None:intergenic
TTCACTGATGTCCATGTCAT+TGG 0.484026 7:+77210812 None:intergenic
TACATTGCCGATGCCTACCT+TGG 0.484771 7:-77210912 MsG0780040415.01.T01:CDS
TGCGTGGAGCACACTTGTGC+AGG 0.486699 7:-77213268 MsG0780040415.01.T01:five_prime_UTR
ATACTGTTACCTATTGGAAC+TGG 0.488588 7:+77212871 None:intergenic
CAAGTGGTTGCATGCGTCGT+TGG 0.488754 7:-77209876 MsG0780040415.01.T01:CDS
AATTGCAGAAACAATTATGT+TGG 0.489968 7:+77213135 None:intergenic
CATGTTTGTGGGAGGCCGCT+AGG 0.492818 7:-77210966 MsG0780040415.01.T01:CDS
GGTAAAGCATTGTCAAAGCT+TGG 0.494050 7:-77209905 MsG0780040415.01.T01:CDS
TTTGTTTAAAGCAACACCAT+TGG 0.496694 7:+77210138 None:intergenic
CCAGAATTGGAGCATGTTTG+TGG 0.497506 7:-77210978 MsG0780040415.01.T01:CDS
AGTGAAATTGAAGAGAAAGA+TGG 0.502065 7:-77209758 MsG0780040415.01.T01:CDS
CTTTCATTTCACCAATGACA+TGG 0.505875 7:-77210823 MsG0780040415.01.T01:CDS
CAGAATTGGAGCATGTTTGT+GGG 0.506936 7:-77210977 MsG0780040415.01.T01:CDS
CTCCACGTCACCGGAGCCGT+CGG 0.510457 7:-77213007 MsG0780040415.01.T01:CDS
GTGTTCTTCGATCCAGGAAT+GGG 0.516001 7:+77213049 None:intergenic
TTCTTAGTGGGGACAAGACT+GGG 0.520668 7:-77210225 MsG0780040415.01.T01:CDS
ATGTCTTCCAATCTGTGGGC+TGG 0.527680 7:-77209926 MsG0780040415.01.T01:CDS
TACCTTGGCCTCAAAGTAGT+AGG 0.529175 7:-77210897 MsG0780040415.01.T01:CDS
GGTGTTCTTCGATCCAGGAA+TGG 0.533511 7:+77213048 None:intergenic
GCCCGACGGCTCCGGTGACG+TGG 0.533854 7:+77213005 None:intergenic
TTCGATCCAGGAATGGGAAG+TGG 0.538313 7:+77213055 None:intergenic
GTCCTACTACTTTGAGGCCA+AGG 0.539170 7:+77210895 None:intergenic
CAAGCACAGTCTACCGGAGA+AGG 0.539363 7:-77210761 MsG0780040415.01.T01:intron
GAAGTGAAGGTCTTATTAAG+TGG 0.540757 7:-77210172 MsG0780040415.01.T01:CDS
AGCTTTATAGCTGCAGCATG+AGG 0.541139 7:+77209845 None:intergenic
CCTTACACCGGTGTGGCAGA+TGG 0.541774 7:-77212947 MsG0780040415.01.T01:CDS
AAGTCTTGGAAGATTGTGAA+GGG 0.545802 7:-77209799 MsG0780040415.01.T01:CDS
GAAAGATGGAAAACTTTGGA+TGG 0.549433 7:-77209744 MsG0780040415.01.T01:CDS
AGTGGCCTTGCGTTTCCCAA+TGG 0.550733 7:-77210154 MsG0780040415.01.T01:CDS
TCCACGTCACCGGAGCCGTC+GGG 0.553815 7:-77213006 MsG0780040415.01.T01:CDS
AGTGGATGTCTTCCAATCTG+TGG 0.557035 7:-77209931 MsG0780040415.01.T01:CDS
CTGATTCAAGCACAGTCTAC+CGG 0.566496 7:-77210767 MsG0780040415.01.T01:CDS
CGTCACCGGAGCCGTCGGGC+CGG 0.571004 7:-77213002 MsG0780040415.01.T01:CDS
GGGAAGGAGAAGAACGTGGT+TGG 0.573176 7:-77212910 MsG0780040415.01.T01:CDS
AGCTTCTGTTGCTACCTGGG+TGG 0.577553 7:+77210857 None:intergenic
GAAGTCTTGGAAGATTGTGA+AGG 0.580211 7:-77209800 MsG0780040415.01.T01:CDS
GTGGATGTCTTCCAATCTGT+GGG 0.586357 7:-77209930 MsG0780040415.01.T01:CDS
CTATAAAGCTGAGTGATGAA+GGG 0.586876 7:-77209832 MsG0780040415.01.T01:CDS
TAAGTCAACAAAAGAAGTGA+AGG 0.587895 7:-77210185 MsG0780040415.01.T01:CDS
ATGTCATTGGTGAAATGAAA+GGG 0.588342 7:+77210825 None:intergenic
GAACAGCAAAAGTATCGACT+TGG 0.589428 7:+77210038 None:intergenic
TATGCTTGTACTTCTTAGTG+GGG 0.597447 7:-77210236 MsG0780040415.01.T01:CDS
TTTGAGGCCAAGGTAGGCAT+CGG 0.599880 7:+77210905 None:intergenic
GAGTAACTTAGCAGCATGGA+GGG 0.600136 7:+77213027 None:intergenic
CAAAGCTTGGAAACTTCAAG+TGG 0.602913 7:-77209892 MsG0780040415.01.T01:CDS
GCTAAGTTACTCCACGTCAC+CGG 0.608816 7:-77213016 MsG0780040415.01.T01:CDS
TCAAAGTAGTAGGACCTGCA+GGG 0.609993 7:-77210887 MsG0780040415.01.T01:CDS
CATGTCATTGGTGAAATGAA+AGG 0.611001 7:+77210824 None:intergenic
TATAAAGCTGAGTGATGAAG+GGG 0.611274 7:-77209831 MsG0780040415.01.T01:CDS
CATTGGTGAAATGAAAGGGC+TGG 0.613755 7:+77210829 None:intergenic
AATCCGACCATCTGCCACAC+CGG 0.619539 7:+77212940 None:intergenic
ACACCGGTGTGGCAGATGGT+CGG 0.622512 7:-77212943 MsG0780040415.01.T01:CDS
TTATGTTTCAAGAAGATAAG+CGG 0.631671 7:+77213167 None:intergenic
CGTGGAGTAACTTAGCAGCA+TGG 0.632964 7:+77213023 None:intergenic
AATGTAAGGAGAAATTCAGA+AGG 0.634592 7:-77209998 MsG0780040415.01.T01:CDS
GTTGAATGAGGTGAAGATGA+TGG 0.635512 7:+77213096 None:intergenic
CAAAGTAGTAGGACCTGCAG+GGG 0.636010 7:-77210886 MsG0780040415.01.T01:CDS
AATTGGAGCATGTTTGTGGG+AGG 0.638644 7:-77210974 MsG0780040415.01.T01:CDS
AACAAGACTCTCCGGCCCGA+CGG 0.638897 7:+77212991 None:intergenic
CAACACCATTGGGAAACGCA+AGG 0.648589 7:+77210149 None:intergenic
TACTACTTTGAGGCCAAGGT+AGG 0.651419 7:+77210899 None:intergenic
AAGTGGGAAGGAGAAGAACG+TGG 0.651427 7:-77212914 MsG0780040415.01.T01:CDS
TTATCAAACTTCAGTCCTAG+CGG 0.652217 7:+77210951 None:intergenic
CAGGTAGCAACAGAAGCTGA+AGG 0.655103 7:-77210852 MsG0780040415.01.T01:CDS
ATGTAAGGAGAAATTCAGAA+GGG 0.672339 7:-77209997 MsG0780040415.01.T01:CDS
TGTTTCAAGAAGATAAGCGG+AGG 0.673368 7:+77213170 None:intergenic
CATGGTGAAGGTCCTTACAC+CGG 0.675393 7:-77212959 MsG0780040415.01.T01:CDS
GGAGTAACTTAGCAGCATGG+AGG 0.682131 7:+77213026 None:intergenic
TGAAGGTCCTTACACCGGTG+TGG 0.699329 7:-77212954 MsG0780040415.01.T01:CDS
TTAGTGGGGACAAGACTGGG+AGG 0.734887 7:-77210222 MsG0780040415.01.T01:CDS
AAAGTAGTAGGACCTGCAGG+GGG 0.741804 7:-77210885 MsG0780040415.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTAAAAGTAATACTT+TGG + Chr7:77210886-77210905 None:intergenic 10.0%
!! AAATTAACCAATAGTTAATA+AGG - Chr7:77210900-77210919 MsG0780040415.01.T01:CDS 15.0%
!! AAATTATCCTTATTAACTAT+TGG + Chr7:77210910-77210929 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - Chr7:77210909-77210928 MsG0780040415.01.T01:CDS 15.0%
!! AATGTAAATAATATTGTGTA+AGG + Chr7:77211464-77211483 None:intergenic 15.0%
!! AATTATCTTTAAACTTAGTT+TGG - Chr7:77213223-77213242 MsG0780040415.01.T01:five_prime_UTR 15.0%
!!! GTTTGTTTTTGTTTTTTATT+TGG + Chr7:77209615-77209634 None:intergenic 15.0%
!!! TAATTTTATTCTAACTAACA+TGG - Chr7:77210685-77210704 MsG0780040415.01.T01:intron 15.0%
!!! TTTGGTTTACATAAAATTTA+GGG - Chr7:77210399-77210418 MsG0780040415.01.T01:intron 15.0%
!! AAAAGATAAATTGTGAAACT+TGG + Chr7:77210021-77210040 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + Chr7:77210823-77210842 None:intergenic 20.0%
!! ATCATAAGGATTGTTTATTT+AGG + Chr7:77212274-77212293 None:intergenic 20.0%
!! ATGAATTGGGATTTAAAAAT+TGG - Chr7:77212315-77212334 MsG0780040415.01.T01:intron 20.0%
!! GAATAATTAGTTCACAATAT+TGG + Chr7:77211276-77211295 None:intergenic 20.0%
!! GCTAGACTATTAAAAAAAAA+AGG - Chr7:77210205-77210224 MsG0780040415.01.T01:CDS 20.0%
!! TACTATATTAGTGTTTATAC+TGG - Chr7:77213179-77213198 MsG0780040415.01.T01:five_prime_UTR 20.0%
!! TATTTCAACTAATTTGAACA+CGG - Chr7:77211416-77211435 MsG0780040415.01.T01:intron 20.0%
!!! AATTTTGCATACTTGATTTT+TGG - Chr7:77210248-77210267 MsG0780040415.01.T01:intron 20.0%
!!! AGAAATTTTGATCTAAATGT+TGG - Chr7:77212568-77212587 MsG0780040415.01.T01:intron 20.0%
!!! CTTTGGTTTACATAAAATTT+AGG - Chr7:77210398-77210417 MsG0780040415.01.T01:intron 20.0%
!!! TTTGATTTTAAAACTCTTCT+TGG - Chr7:77211672-77211691 MsG0780040415.01.T01:intron 20.0%
! AAAAAGACATGTCTTGAAAT+CGG + Chr7:77210472-77210491 None:intergenic 25.0%
! AAAATCAAATACAGTACAAC+CGG + Chr7:77211661-77211680 None:intergenic 25.0%
! AAACCAAAGAAAAAGAGTAA+AGG + Chr7:77210387-77210406 None:intergenic 25.0%
! AATGATTAAGAGAAAGAGAA+TGG + Chr7:77210943-77210962 None:intergenic 25.0%
! AATTGCAGAAACAATTATGT+TGG + Chr7:77209717-77209736 None:intergenic 25.0%
! AATTTCACTGATAAACTTCA+AGG + Chr7:77213080-77213099 None:intergenic 25.0%
! ATGGTTGAACTTTCAAAAAA+TGG + Chr7:77212399-77212418 None:intergenic 25.0%
! ATTTCAACTAATTTGAACAC+GGG - Chr7:77211417-77211436 MsG0780040415.01.T01:intron 25.0%
! CATATTGACATTTGATAAGT+TGG - Chr7:77210123-77210142 MsG0780040415.01.T01:CDS 25.0%
! CTGAAGTTTGATAAAAAAAG+TGG - Chr7:77211907-77211926 MsG0780040415.01.T01:intron 25.0%
! GACATTACTCAAACAATATT+AGG - Chr7:77211778-77211797 MsG0780040415.01.T01:intron 25.0%
! TATTAGAAAGTAATTCTTCG+AGG + Chr7:77211145-77211164 None:intergenic 25.0%
! TATTGAGAAGTGAAGAAATA+CGG + Chr7:77210165-77210184 None:intergenic 25.0%
! TCAGTGTTAATGTCTTATAT+TGG - Chr7:77213130-77213149 MsG0780040415.01.T01:CDS 25.0%
! TGATTCTCAATTGTAAGAAT+TGG - Chr7:77211494-77211513 MsG0780040415.01.T01:intron 25.0%
! TGTAAATTACCTTTCTTCAA+GGG + Chr7:77211298-77211317 None:intergenic 25.0%
! TTATGTTTCAAGAAGATAAG+CGG + Chr7:77209685-77209704 None:intergenic 25.0%
! TTTCAAAAAATGGAAAAACC+AGG + Chr7:77212389-77212408 None:intergenic 25.0%
!!! GTTTGTAGTTGTTATTTAGA+AGG - Chr7:77210090-77210109 MsG0780040415.01.T01:CDS 25.0%
!!! TGTTGGTTACTTTTATTTAC+AGG - Chr7:77212585-77212604 MsG0780040415.01.T01:intron 25.0%
!!! TTTTAAGAGACGAAAGAATT+AGG - Chr7:77211249-77211268 MsG0780040415.01.T01:intron 25.0%
AAACTTGGAAAACACCAAAT+AGG + Chr7:77210006-77210025 None:intergenic 30.0%
AAATATGTGCTCTTAACATG+TGG + Chr7:77211231-77211250 None:intergenic 30.0%
AACCAGGATGATCTTAATAA+AGG + Chr7:77212373-77212392 None:intergenic 30.0%
AAGAGAAAGATGGAAAACTT+TGG - Chr7:77213101-77213120 MsG0780040415.01.T01:CDS 30.0%
AAGTATGATATTAAGCACAC+TGG - Chr7:77211367-77211386 MsG0780040415.01.T01:intron 30.0%
AATGTAAGGAGAAATTCAGA+AGG - Chr7:77212851-77212870 MsG0780040415.01.T01:intron 30.0%
AGGTAACAGTATTACCTATT+TGG - Chr7:77209989-77210008 MsG0780040415.01.T01:CDS 30.0%
AGTATGATATTAAGCACACT+GGG - Chr7:77211368-77211387 MsG0780040415.01.T01:intron 30.0%
AGTGAAATTGAAGAGAAAGA+TGG - Chr7:77213091-77213110 MsG0780040415.01.T01:CDS 30.0%
ATATATGCTCTTCTATTCCT+AGG + Chr7:77211098-77211117 None:intergenic 30.0%
ATGATGACAGTATAAAGACT+TGG - Chr7:77211591-77211610 MsG0780040415.01.T01:intron 30.0%
ATGTAAGGAGAAATTCAGAA+GGG - Chr7:77212852-77212871 MsG0780040415.01.T01:intron 30.0%
ATGTCATTGGTGAAATGAAA+GGG + Chr7:77212027-77212046 None:intergenic 30.0%
ATTGAGAAGTGAAGAAATAC+GGG + Chr7:77210164-77210183 None:intergenic 30.0%
CATGTGAAACATGAAGTAAA+AGG + Chr7:77211204-77211223 None:intergenic 30.0%
CTAATTATTCCCTTGAAGAA+AGG - Chr7:77211286-77211305 MsG0780040415.01.T01:intron 30.0%
CTGTAAATTACCTTTCTTCA+AGG + Chr7:77211299-77211318 None:intergenic 30.0%
GGAGTATAACTAAACTAACA+TGG - Chr7:77211017-77211036 MsG0780040415.01.T01:intron 30.0%
TAAGTCAACAAAAGAAGTGA+AGG - Chr7:77212664-77212683 MsG0780040415.01.T01:intron 30.0%
TAGGTAATACTGTTACCTAT+TGG + Chr7:77209987-77210006 None:intergenic 30.0%
TCTTACAATTGAGAATCAGA+AGG + Chr7:77211492-77211511 None:intergenic 30.0%
TGATGACAGTATAAAGACTT+GGG - Chr7:77211592-77211611 MsG0780040415.01.T01:intron 30.0%
TTATGCTTGTACTTCTTAGT+GGG - Chr7:77212612-77212631 MsG0780040415.01.T01:intron 30.0%
TTCCTTTATTAAGATCATCC+TGG - Chr7:77212368-77212387 MsG0780040415.01.T01:intron 30.0%
TTTATGCTTGTACTTCTTAG+TGG - Chr7:77212611-77212630 MsG0780040415.01.T01:intron 30.0%
TTTCAACTAATTTGAACACG+GGG - Chr7:77211418-77211437 MsG0780040415.01.T01:intron 30.0%
TTTCTTCACTTCTCAATACT+TGG - Chr7:77210167-77210186 MsG0780040415.01.T01:CDS 30.0%
! AAATTCAGAAGGGCAATTTT+GGG - Chr7:77212862-77212881 MsG0780040415.01.T01:intron 30.0%
! AGAGTTTCAATCAAAGCATT+TGG + Chr7:77211555-77211574 None:intergenic 30.0%
! AGGAATAGAAGAGCATATAT+TGG - Chr7:77211098-77211117 MsG0780040415.01.T01:intron 30.0%
! GAATAGAAGAGCATATATTG+GGG - Chr7:77211100-77211119 MsG0780040415.01.T01:intron 30.0%
! GAGTTTCAATCAAAGCATTT+GGG + Chr7:77211554-77211573 None:intergenic 30.0%
! GGAATAGAAGAGCATATATT+GGG - Chr7:77211099-77211118 MsG0780040415.01.T01:intron 30.0%
! GTATAGTTGTACGATTTTCA+AGG - Chr7:77211824-77211843 MsG0780040415.01.T01:intron 30.0%
! TAAAGACAACTTGAAGTGTT+TGG + Chr7:77210511-77210530 None:intergenic 30.0%
! TAATTCTTCGAGGTACTATA+GGG + Chr7:77211135-77211154 None:intergenic 30.0%
! TTGCCTTTACTCTTTTTCTT+TGG - Chr7:77210381-77210400 MsG0780040415.01.T01:intron 30.0%
! TTGTTTAAAGCAACACCATT+GGG + Chr7:77212713-77212732 None:intergenic 30.0%
! TTTAAAACTCTTCTTGGAAC+TGG - Chr7:77211678-77211697 MsG0780040415.01.T01:intron 30.0%
! TTTACTCTTTTTCCACTACA+GGG - Chr7:77210527-77210546 MsG0780040415.01.T01:intron 30.0%
! TTTGTTTAAAGCAACACCAT+TGG + Chr7:77212714-77212733 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - Chr7:77210992-77211011 MsG0780040415.01.T01:CDS 30.0%
!! TTTTTGAAAGTTCAACCATG+TGG - Chr7:77212400-77212419 MsG0780040415.01.T01:intron 30.0%
!!! AGTCTTGTTTTTGATAGTCA+TGG - Chr7:77209872-77209891 MsG0780040415.01.T01:CDS 30.0%
!!! TGCATACTTGATTTTTGGTA+GGG - Chr7:77210253-77210272 MsG0780040415.01.T01:intron 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + Chr7:77210991-77211010 None:intergenic 30.0%
!!! TTGCATACTTGATTTTTGGT+AGG - Chr7:77210252-77210271 MsG0780040415.01.T01:intron 30.0%
AAGATAAGCGGAGGAAAAAA+TGG + Chr7:77209673-77209692 None:intergenic 35.0%
AAGTCTTGGAAGATTGTGAA+GGG - Chr7:77213050-77213069 MsG0780040415.01.T01:CDS 35.0%
AGACACACATGACTATTGAA+AGG + Chr7:77212139-77212158 None:intergenic 35.0%
AGGGGAAATATTAGAAGTCT+TGG - Chr7:77213036-77213055 MsG0780040415.01.T01:CDS 35.0%
AGTGACAGTGTAACATCATA+AGG + Chr7:77212288-77212307 None:intergenic 35.0%
ATACTGTTACCTATTGGAAC+TGG + Chr7:77209981-77210000 None:intergenic 35.0%
CAAAGATGGTTCATTTCTTC+TGG - Chr7:77212730-77212749 MsG0780040415.01.T01:intron 35.0%
CATGTCATTGGTGAAATGAA+AGG + Chr7:77212028-77212047 None:intergenic 35.0%
CTATAAAGCTGAGTGATGAA+GGG - Chr7:77213017-77213036 MsG0780040415.01.T01:CDS 35.0%
CTATCAAAAACAAGACTCTC+CGG + Chr7:77209869-77209888 None:intergenic 35.0%
CTTTCATTTCACCAATGACA+TGG - Chr7:77212026-77212045 MsG0780040415.01.T01:intron 35.0%
CTTTGCAAAAGGAGTTTCTT+TGG + Chr7:77212900-77212919 None:intergenic 35.0%
GAAAGATGGAAAACTTTGGA+TGG - Chr7:77213105-77213124 MsG0780040415.01.T01:CDS 35.0%
GAATTTCTCCTTACATTGTC+CGG + Chr7:77212848-77212867 None:intergenic 35.0%
GACACACATGACTATTGAAA+GGG + Chr7:77212138-77212157 None:intergenic 35.0%
GATGACAGTATAAAGACTTG+GGG - Chr7:77211593-77211612 MsG0780040415.01.T01:intron 35.0%
GCAGCAAAAGATATCTACAT+AGG + Chr7:77212537-77212556 None:intergenic 35.0%
GTGCTTTGACTATGAGTAAT+TGG - Chr7:77210283-77210302 MsG0780040415.01.T01:intron 35.0%
TAAATAACCATGCACTCTAG+AGG + Chr7:77210614-77210633 None:intergenic 35.0%
TACTTTCTAATAGCAAGTCG+TGG - Chr7:77211153-77211172 MsG0780040415.01.T01:intron 35.0%
TATAAAGCTGAGTGATGAAG+GGG - Chr7:77213018-77213037 MsG0780040415.01.T01:CDS 35.0%
TATGCTTGTACTTCTTAGTG+GGG - Chr7:77212613-77212632 MsG0780040415.01.T01:intron 35.0%
TTATCAAACTTCAGTCCTAG+CGG + Chr7:77211901-77211920 None:intergenic 35.0%
TTCTTGGAACTGGACAAATT+GGG - Chr7:77211688-77211707 MsG0780040415.01.T01:intron 35.0%
! AAGAAACTCCTTTTGCAAAG+TGG - Chr7:77212900-77212919 MsG0780040415.01.T01:CDS 35.0%
! AATTCTTCGAGGTACTATAG+GGG + Chr7:77211134-77211153 None:intergenic 35.0%
! ACAGGGATTTCTTGAGTTTT+AGG - Chr7:77210544-77210563 MsG0780040415.01.T01:intron 35.0%
! CTTTACTCTTTTTCCACTAC+AGG - Chr7:77210526-77210545 MsG0780040415.01.T01:intron 35.0%
! GAAAGGGACGTAAATTTTAG+TGG + Chr7:77212122-77212141 None:intergenic 35.0%
! GAAATTCAGAAGGGCAATTT+TGG - Chr7:77212861-77212880 MsG0780040415.01.T01:intron 35.0%
! GCTATTGTGCACGAAATTTT+TGG - Chr7:77212179-77212198 MsG0780040415.01.T01:intron 35.0%
! GTAATTCTTCGAGGTACTAT+AGG + Chr7:77211136-77211155 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG + Chr7:77210861-77210880 None:intergenic 35.0%
! TAAAATTTAGGGTGAGTCGA+AGG - Chr7:77210410-77210429 MsG0780040415.01.T01:intron 35.0%
! TACTTGGTATGTGAGTTTTG+TGG - Chr7:77210183-77210202 MsG0780040415.01.T01:CDS 35.0%
! TGTGCAGAGTATTAATTGGA+GGG + Chr7:77210857-77210876 None:intergenic 35.0%
! TTACTTTCTAGGAGATCAGA+CGG + Chr7:77211620-77211639 None:intergenic 35.0%
! TTTTGGACAAAATACGCTTC+AGG - Chr7:77212196-77212215 MsG0780040415.01.T01:intron 35.0%
!! GAAGTGAAGGTCTTATTAAG+TGG - Chr7:77212677-77212696 MsG0780040415.01.T01:intron 35.0%
!! GGTGTTGCTTTAAACAAAGA+TGG - Chr7:77212716-77212735 MsG0780040415.01.T01:intron 35.0%
!! GTTTTTGATAGTCATGGTGA+AGG - Chr7:77209878-77209897 MsG0780040415.01.T01:CDS 35.0%
!!! TACTTGATTTTTGGTAGGGT+AGG - Chr7:77210257-77210276 MsG0780040415.01.T01:intron 35.0%
AACTCAAGAAATCCCTGTAG+TGG + Chr7:77210542-77210561 None:intergenic 40.0%
AATAGCAAGTCGTGGATATC+TGG - Chr7:77211161-77211180 MsG0780040415.01.T01:intron 40.0%
ACATAGTTGCACATTTCCCA+AGG + Chr7:77211728-77211747 None:intergenic 40.0%
ATAGCAAGTCGTGGATATCT+GGG - Chr7:77211162-77211181 MsG0780040415.01.T01:intron 40.0%
CAAAGCTTGGAAACTTCAAG+TGG - Chr7:77212957-77212976 MsG0780040415.01.T01:CDS 40.0%
CAGAATTGGAGCATGTTTGT+GGG - Chr7:77211872-77211891 MsG0780040415.01.T01:intron 40.0%
CTAACTAACATGGTGTGACA+GGG - Chr7:77210695-77210714 MsG0780040415.01.T01:intron 40.0%
CTTCTTGGAACTGGACAAAT+TGG - Chr7:77211687-77211706 MsG0780040415.01.T01:intron 40.0%
GAAATTTCACTCTCACCACA+TGG + Chr7:77212418-77212437 None:intergenic 40.0%
GAAGACATCCACTTTGCAAA+AGG + Chr7:77212911-77212930 None:intergenic 40.0%
GAAGTCTTGGAAGATTGTGA+AGG - Chr7:77213049-77213068 MsG0780040415.01.T01:CDS 40.0%
GAATGGGAAGTGGTGAAAAA+GGG + Chr7:77209787-77209806 None:intergenic 40.0%
GCTATAAAGCTGAGTGATGA+AGG - Chr7:77213016-77213035 MsG0780040415.01.T01:CDS 40.0%
GCTTTGATTGAAACTCTACC+TGG - Chr7:77211558-77211577 MsG0780040415.01.T01:intron 40.0%
GTCATCATGCAAAACTTACC+AGG + Chr7:77211579-77211598 None:intergenic 40.0%
GTCTGATCTCCTAGAAAGTA+AGG - Chr7:77211619-77211638 MsG0780040415.01.T01:intron 40.0%
GTTGAATGAGGTGAAGATGA+TGG + Chr7:77209756-77209775 None:intergenic 40.0%
TCTAACTAACATGGTGTGAC+AGG - Chr7:77210694-77210713 MsG0780040415.01.T01:intron 40.0%
TCTCCTAGAAAGTAAGGTAC+TGG - Chr7:77211625-77211644 MsG0780040415.01.T01:intron 40.0%
TCTTGGAACTGGACAAATTG+GGG - Chr7:77211689-77211708 MsG0780040415.01.T01:intron 40.0%
TGGTTGCACTTCTCTTTAAG+TGG - Chr7:77210303-77210322 MsG0780040415.01.T01:intron 40.0%
TGTCCAGTACCTTACTTTCT+AGG + Chr7:77211631-77211650 None:intergenic 40.0%
TGTTTCAAGAAGATAAGCGG+AGG + Chr7:77209682-77209701 None:intergenic 40.0%
TTCACTGATGTCCATGTCAT+TGG + Chr7:77212040-77212059 None:intergenic 40.0%
! ACTTGAAGTGTTTGGTCTAG+TGG + Chr7:77210503-77210522 None:intergenic 40.0%
! GATGTTACACTGTCACTTCA+GGG - Chr7:77212291-77212310 MsG0780040415.01.T01:intron 40.0%
! GTGTGCAGAGTATTAATTGG+AGG + Chr7:77210858-77210877 None:intergenic 40.0%
! TGATGTTACACTGTCACTTC+AGG - Chr7:77212290-77212309 MsG0780040415.01.T01:intron 40.0%
!! AAGCGACGCTCATTTTGAAA+CGG + Chr7:77210757-77210776 None:intergenic 40.0%
!! AGGGTTTTGTGAGTTGAATG+AGG + Chr7:77209768-77209787 None:intergenic 40.0%
!! GAACAGCAAAAGTATCGACT+TGG + Chr7:77212814-77212833 None:intergenic 40.0%
!! GGACGTAAATTTTAGTGGTG+AGG + Chr7:77212117-77212136 None:intergenic 40.0%
!! GGTAAAGCATTGTCAAAGCT+TGG - Chr7:77212944-77212963 MsG0780040415.01.T01:CDS 40.0%
!!! AGATGGTCGGATTTTGAAGT+GGG - Chr7:77209919-77209938 MsG0780040415.01.T01:CDS 40.0%
!!! GACACTCATTTTGAAACGGA+TGG - Chr7:77210996-77211015 MsG0780040415.01.T01:CDS 40.0%
!!! GATACTTTTGCTGTTCTTCC+AGG - Chr7:77212818-77212837 MsG0780040415.01.T01:intron 40.0%
AACCGAGTCTCTTAAGCATG+TGG - Chr7:77211059-77211078 MsG0780040415.01.T01:intron 45.0%
AATTGGAGCATGTTTGTGGG+AGG - Chr7:77211875-77211894 MsG0780040415.01.T01:intron 45.0%
AGCGGAGGAAAAAATGGAAG+TGG + Chr7:77209667-77209686 None:intergenic 45.0%
AGTGGATGTCTTCCAATCTG+TGG - Chr7:77212918-77212937 MsG0780040415.01.T01:CDS 45.0%
CATTGGTGAAATGAAAGGGC+TGG + Chr7:77212023-77212042 None:intergenic 45.0%
CCACAAACATGCTCCAATTC+TGG + Chr7:77211874-77211893 None:intergenic 45.0%
CCAGAATTGGAGCATGTTTG+TGG - Chr7:77211871-77211890 MsG0780040415.01.T01:intron 45.0%
CTGATTCAAGCACAGTCTAC+CGG - Chr7:77212082-77212101 MsG0780040415.01.T01:intron 45.0%
CTTGGAACTGGACAAATTGG+GGG - Chr7:77211690-77211709 MsG0780040415.01.T01:intron 45.0%
GAGTAACTTAGCAGCATGGA+GGG + Chr7:77209825-77209844 None:intergenic 45.0%
GCATCCATTTGCACCAGAAT+TGG - Chr7:77211858-77211877 MsG0780040415.01.T01:intron 45.0%
GGAATGGGAAGTGGTGAAAA+AGG + Chr7:77209788-77209807 None:intergenic 45.0%
GTCACTTCAGGGCATGAATT+GGG - Chr7:77212302-77212321 MsG0780040415.01.T01:intron 45.0%
GTGGATGTCTTCCAATCTGT+GGG - Chr7:77212919-77212938 MsG0780040415.01.T01:CDS 45.0%
GTGTTCTTCGATCCAGGAAT+GGG + Chr7:77209803-77209822 None:intergenic 45.0%
TACCTTGGCCTCAAAGTAGT+AGG - Chr7:77211952-77211971 MsG0780040415.01.T01:intron 45.0%
TCAAAGTAGTAGGACCTGCA+GGG - Chr7:77211962-77211981 MsG0780040415.01.T01:intron 45.0%
TGCTCCAATTCTGGTGCAAA+TGG + Chr7:77211865-77211884 None:intergenic 45.0%
TGTCTTGAAATCGGAGATCC+CGG + Chr7:77210463-77210482 None:intergenic 45.0%
TTCAGCTTCTGTTGCTACCT+GGG + Chr7:77211998-77212017 None:intergenic 45.0%
TTCTTAGTGGGGACAAGACT+GGG - Chr7:77212624-77212643 MsG0780040415.01.T01:intron 45.0%
TTGCTGTCACCAGTTCCAAT+AGG - Chr7:77209969-77209988 MsG0780040415.01.T01:CDS 45.0%
TTGGAACTGGACAAATTGGG+GGG - Chr7:77211691-77211710 MsG0780040415.01.T01:intron 45.0%
! AGCTTTATAGCTGCAGCATG+AGG + Chr7:77213007-77213026 None:intergenic 45.0%
! TAGCTGAAACTTCGACTTGC+AGG - Chr7:77212753-77212772 MsG0780040415.01.T01:intron 45.0%
! TGTACTAAGGCACTTGAACC+CGG - Chr7:77210441-77210460 MsG0780040415.01.T01:intron 45.0%
! TGTCACTTCAGGGCATGAAT+TGG - Chr7:77212301-77212320 MsG0780040415.01.T01:intron 45.0%
! TTTTCACCACTTCCCATTCC+TGG - Chr7:77209788-77209807 MsG0780040415.01.T01:CDS 45.0%
!! CAGATGGTCGGATTTTGAAG+TGG - Chr7:77209918-77209937 MsG0780040415.01.T01:CDS 45.0%
!! GAAGGTGTTTCGGTGTACTA+AGG - Chr7:77210428-77210447 MsG0780040415.01.T01:intron 45.0%
!! TACTACTTTGAGGCCAAGGT+AGG + Chr7:77211953-77211972 None:intergenic 45.0%
!! TTTGCTTCCTCTAGAGTGCA+TGG - Chr7:77210604-77210623 MsG0780040415.01.T01:intron 45.0%
!!! GACGCTCATTTTGAAACGGA+GGG + Chr7:77210753-77210772 None:intergenic 45.0%
AAAGTAGTAGGACCTGCAGG+GGG - Chr7:77211964-77211983 MsG0780040415.01.T01:intron 50.0%
AAGTGGGAAGGAGAAGAACG+TGG - Chr7:77209935-77209954 MsG0780040415.01.T01:CDS 50.0%
AGTCTCTTAAGCATGTGGCC+AGG - Chr7:77211064-77211083 MsG0780040415.01.T01:intron 50.0%
AGTGGTGAGGTTACCTTCTC+CGG + Chr7:77212104-77212123 None:intergenic 50.0%
ATGTCTTCCAATCTGTGGGC+TGG - Chr7:77212923-77212942 MsG0780040415.01.T01:CDS 50.0%
CAAAGTAGTAGGACCTGCAG+GGG - Chr7:77211963-77211982 MsG0780040415.01.T01:intron 50.0%
CAACACCATTGGGAAACGCA+AGG + Chr7:77212703-77212722 None:intergenic 50.0%
CAGCCTAGCTACACTACACT+AGG + Chr7:77210345-77210364 None:intergenic 50.0%
CAGGCTTTCCGGACAATGTA+AGG - Chr7:77212837-77212856 MsG0780040415.01.T01:intron 50.0%
CAGGTAGCAACAGAAGCTGA+AGG - Chr7:77211997-77212016 MsG0780040415.01.T01:intron 50.0%
CATGGTGAAGGTCCTTACAC+CGG - Chr7:77209890-77209909 MsG0780040415.01.T01:CDS 50.0%
CGTGGAGTAACTTAGCAGCA+TGG + Chr7:77209829-77209848 None:intergenic 50.0%
CTAACATGGTGTGACAGGGT+TGG - Chr7:77210699-77210718 MsG0780040415.01.T01:intron 50.0%
CTAACATGGTGTGACGCAGA+TGG - Chr7:77211031-77211050 MsG0780040415.01.T01:intron 50.0%
CTCAAAGTAGTAGGACCTGC+AGG - Chr7:77211961-77211980 MsG0780040415.01.T01:intron 50.0%
CTGCAGGTCCTACTACTTTG+AGG + Chr7:77211963-77211982 None:intergenic 50.0%
CTTACATTGTCCGGAAAGCC+TGG + Chr7:77212839-77212858 None:intergenic 50.0%
CTTCAGCTTCTGTTGCTACC+TGG + Chr7:77211999-77212018 None:intergenic 50.0%
CTTCTTAGTGGGGACAAGAC+TGG - Chr7:77212623-77212642 MsG0780040415.01.T01:intron 50.0%
GAGCCTAGTGTAGTGTAGCT+AGG - Chr7:77210339-77210358 MsG0780040415.01.T01:intron 50.0%
GCTAAGTTACTCCACGTCAC+CGG - Chr7:77209833-77209852 MsG0780040415.01.T01:CDS 50.0%
GGAGTAACTTAGCAGCATGG+AGG + Chr7:77209826-77209845 None:intergenic 50.0%
GGCCACATGCTTAAGAGACT+CGG + Chr7:77211064-77211083 None:intergenic 50.0%
GGTGTTCTTCGATCCAGGAA+TGG + Chr7:77209804-77209823 None:intergenic 50.0%
GTCTCTTAAGCATGTGGCCA+GGG - Chr7:77211065-77211084 MsG0780040415.01.T01:intron 50.0%
GTCTTGAAATCGGAGATCCC+GGG + Chr7:77210462-77210481 None:intergenic 50.0%
TACATTGCCGATGCCTACCT+TGG - Chr7:77211937-77211956 MsG0780040415.01.T01:intron 50.0%
TATTCCTAGGACCAATCCCC+TGG + Chr7:77211085-77211104 None:intergenic 50.0%
TCTCTTAAGCATGTGGCCAG+GGG - Chr7:77211066-77211085 MsG0780040415.01.T01:intron 50.0%
TGCTGTTCTTCCAGGCTTTC+CGG - Chr7:77212826-77212845 MsG0780040415.01.T01:intron 50.0%
TGCTTTACCAGCCCACAGAT+TGG + Chr7:77212933-77212952 None:intergenic 50.0%
TTCGATCCAGGAATGGGAAG+TGG + Chr7:77209797-77209816 None:intergenic 50.0%
! CTTCGACTTGCAGGATTCTG+AGG - Chr7:77212762-77212781 MsG0780040415.01.T01:intron 50.0%
! GTACTAAGGCACTTGAACCC+GGG - Chr7:77210442-77210461 MsG0780040415.01.T01:intron 50.0%
! TTTGAGGCCAAGGTAGGCAT+CGG + Chr7:77211947-77211966 None:intergenic 50.0%
!! AGGGTGAGTCGAAGGTGTTT+CGG - Chr7:77210418-77210437 MsG0780040415.01.T01:intron 50.0%
!! AGGTACTGGACAGACAACTC+CGG - Chr7:77211639-77211658 MsG0780040415.01.T01:intron 50.0%
!! ATTCTGAGGCTTTGGCTTCG+TGG - Chr7:77212776-77212795 MsG0780040415.01.T01:intron 50.0%
!! CTTGCAGGATTCTGAGGCTT+TGG - Chr7:77212768-77212787 MsG0780040415.01.T01:intron 50.0%
!! GTCCTACTACTTTGAGGCCA+AGG + Chr7:77211957-77211976 None:intergenic 50.0%
!!! CGACGCTCATTTTGAAACGG+AGG + Chr7:77210754-77210773 None:intergenic 50.0%
!!! GGTCGGATTTTGAAGTGGGA+AGG - Chr7:77209923-77209942 MsG0780040415.01.T01:CDS 50.0%
!!! GTATCGACTTGGCCAGCTTT+TGG + Chr7:77212803-77212822 None:intergenic 50.0%
AATCCGACCATCTGCCACAC+CGG + Chr7:77209912-77209931 None:intergenic 55.0%
AGCTTCTGTTGCTACCTGGG+TGG + Chr7:77211995-77212014 None:intergenic 55.0%
CAAGCACAGTCTACCGGAGA+AGG - Chr7:77212088-77212107 MsG0780040415.01.T01:intron 55.0%
CAAGTGGTTGCATGCGTCGT+TGG - Chr7:77212973-77212992 MsG0780040415.01.T01:CDS 55.0%
CATGGTGTGACGCAGATGGT+AGG - Chr7:77211035-77211054 MsG0780040415.01.T01:intron 55.0%
GGGAAGGAGAAGAACGTGGT+TGG - Chr7:77209939-77209958 MsG0780040415.01.T01:CDS 55.0%
TAAGCATGTGGCCAGGGGAT+TGG - Chr7:77211071-77211090 MsG0780040415.01.T01:intron 55.0%
TGAAGGTCCTTACACCGGTG+TGG - Chr7:77209895-77209914 MsG0780040415.01.T01:CDS 55.0%
TGGCTTCGTGGACCAAAAGC+TGG - Chr7:77212788-77212807 MsG0780040415.01.T01:intron 55.0%
TTAGTGGGGACAAGACTGGG+AGG - Chr7:77212627-77212646 MsG0780040415.01.T01:intron 55.0%
! AGTGGCCTTGCGTTTCCCAA+TGG - Chr7:77212695-77212714 MsG0780040415.01.T01:intron 55.0%
!! TGGAGGGTGTTCTTCGATCC+AGG + Chr7:77209809-77209828 None:intergenic 55.0%
AACAAGACTCTCCGGCCCGA+CGG + Chr7:77209861-77209880 None:intergenic 60.0%
ACACCGGTGTGGCAGATGGT+CGG - Chr7:77209906-77209925 MsG0780040415.01.T01:CDS 60.0%
AGTAGGACCTGCAGGGGGTT+TGG - Chr7:77211969-77211988 MsG0780040415.01.T01:intron 60.0%
CATGTTTGTGGGAGGCCGCT+AGG - Chr7:77211883-77211902 MsG0780040415.01.T01:intron 60.0%
CCATCTGCCACACCGGTGTA+AGG + Chr7:77209905-77209924 None:intergenic 60.0%
CCTTACACCGGTGTGGCAGA+TGG - Chr7:77209902-77209921 MsG0780040415.01.T01:CDS 60.0%
! GGGGGCATGAGACTGTCCTT+GGG - Chr7:77211709-77211728 MsG0780040415.01.T01:intron 60.0%
! GGGGGGCATGAGACTGTCCT+TGG - Chr7:77211708-77211727 MsG0780040415.01.T01:intron 65.0%
!! GTGGCCAGGGGATTGGTCCT+AGG - Chr7:77211078-77211097 MsG0780040415.01.T01:intron 65.0%
CTCCACGTCACCGGAGCCGT+CGG - Chr7:77209842-77209861 MsG0780040415.01.T01:CDS 70.0%
TCCACGTCACCGGAGCCGTC+GGG - Chr7:77209843-77209862 MsG0780040415.01.T01:CDS 70.0%
TGCAGGGGGTTTGGCCACCC+AGG - Chr7:77211978-77211997 MsG0780040415.01.T01:intron 70.0%
TGGGTGGCCAAACCCCCTGC+AGG + Chr7:77211979-77211998 None:intergenic 70.0%
ACTCTCCGGCCCGACGGCTC+CGG + Chr7:77209855-77209874 None:intergenic 75.0%
! CGTCACCGGAGCCGTCGGGC+CGG - Chr7:77209847-77209866 MsG0780040415.01.T01:CDS 80.0%
! GCCCGACGGCTCCGGTGACG+TGG + Chr7:77209847-77209866 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 77209582 77213289 77209582 ID=MsG0780040415.01;Name=MsG0780040415.01
Chr7 mRNA 77209582 77213289 77209582 ID=MsG0780040415.01.T01;Parent=MsG0780040415.01;Name=MsG0780040415.01.T01;_AED=0.45;_eAED=0.45;_QI=125|1|1|1|1|1|3|121|369
Chr7 exon 77209582 77210264 77209582 ID=MsG0780040415.01.T01:exon:14848;Parent=MsG0780040415.01.T01
Chr7 exon 77210762 77211025 77210762 ID=MsG0780040415.01.T01:exon:14847;Parent=MsG0780040415.01.T01
Chr7 exon 77212881 77213289 77212881 ID=MsG0780040415.01.T01:exon:14846;Parent=MsG0780040415.01.T01
Chr7 five_prime_UTR 77213165 77213289 77213165 ID=MsG0780040415.01.T01:five_prime_utr;Parent=MsG0780040415.01.T01
Chr7 CDS 77212881 77213164 77212881 ID=MsG0780040415.01.T01:cds;Parent=MsG0780040415.01.T01
Chr7 CDS 77210762 77211025 77210762 ID=MsG0780040415.01.T01:cds;Parent=MsG0780040415.01.T01
Chr7 CDS 77209703 77210264 77209703 ID=MsG0780040415.01.T01:cds;Parent=MsG0780040415.01.T01
Chr7 three_prime_UTR 77209582 77209702 77209582 ID=MsG0780040415.01.T01:three_prime_utr;Parent=MsG0780040415.01.T01
Gene Sequence

>MsG0780040415.01.T01

ATGAACTCCAACATAATTGTTTCTGCAATTTTTCTCGCACTCTTCACCATCATCTTCACCTCATTCAACTCACAAAACCCTTTTTCACCACTTCCCATTCCTGGATCGAAGAACACCCTCCATGCTGCTAAGTTACTCCACGTCACCGGAGCCGTCGGGCCGGAGAGTCTTGTTTTTGATAGTCATGGTGAAGGTCCTTACACCGGTGTGGCAGATGGTCGGATTTTGAAGTGGGAAGGAGAAGAACGTGGTTGGACTCAATTTGCTGTCACCAGTTCCAATAGGTCAAACTGTGTGCATCCATTTGCACCAGAATTGGAGCATGTTTGTGGGAGGCCGCTAGGACTGAAGTTTGATAAAAAAAGTGGAGATCTGTACATTGCCGATGCCTACCTTGGCCTCAAAGTAGTAGGACCTGCAGGGGGTTTGGCCACCCAGGTAGCAACAGAAGCTGAAGGCCAGCCCTTTCATTTCACCAATGACATGGACATCAGTGAAGATGAAGATGTGATTTACTTCACTGATTCAAGCACAGTCTACCGGAGAAGGCAATTTATGCTTGTACTTCTTAGTGGGGACAAGACTGGGAGGTTAATGAAATATGATAAGTCAACAAAAGAAGTGAAGGTCTTATTAAGTGGCCTTGCGTTTCCCAATGGTGTTGCTTTAAACAAAGATGGTTCATTTCTTCTGGTAGCTGAAACTTCGACTTGCAGGATTCTGAGGCTTTGGCTTCGTGGACCAAAAGCTGGCCAAGTCGATACTTTTGCTGTTCTTCCAGGCTTTCCGGACAATGTAAGGAGAAATTCAGAAGGGCAATTTTGGGTTGCTTTGCATGCCAAAGAAACTCCTTTTGCAAAGTGGATGTCTTCCAATCTGTGGGCTGGTAAAGCATTGTCAAAGCTTGGAAACTTCAAGTGGTTGCATGCGTCGTTGGCGATGAAGCCTCATGCTGCAGCTATAAAGCTGAGTGATGAAGGGGAAATATTAGAAGTCTTGGAAGATTGTGAAGGGAAGACCTTGAAGTTTATCAGTGAAATTGAAGAGAAAGATGGAAAACTTTGGATGGCATCAGTGTTAATGTCTTATATTGGTGTTTATAGTTTATGA
Protein sequence

>MsG0780040415.01.T01

MNSNIIVSAIFLALFTIIFTSFNSQNPFSPLPIPGSKNTLHAAKLLHVTGAVGPESLVFDSHGEGPYTGVADGRILKWEGEERGWTQFAVTSSNRSNCVHPFAPELEHVCGRPLGLKFDKKSGDLYIADAYLGLKVVGPAGGLATQVATEAEGQPFHFTNDMDISEDEDVIYFTDSSTVYRRRQFMLVLLSGDKTGRLMKYDKSTKEVKVLLSGLAFPNGVALNKDGSFLLVAETSTCRILRLWLRGPKAGQVDTFAVLPGFPDNVRRNSEGQFWVALHAKETPFAKWMSSNLWAGKALSKLGNFKWLHASLAMKPHAAAIKLSDEGEILEVLEDCEGKTLKFISEIEEKDGKLWMASVLMSYIGVYSL*