AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040428.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040428.01.T01 MTR_7g090160 88.927 289 12 3 1 284 1 274 3.59e-178 492
MsG0780040428.01.T01 MTR_7g090160 86.026 229 12 3 1 224 1 214 1.26e-131 372
MsG0780040428.01.T01 MTR_1046s0010 29.455 275 172 7 15 283 35 293 2.89e-18 83.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040428.01.T01 AT5G14800 66.436 289 77 3 1 284 1 274 1.92e-130 371
MsG0780040428.01.T01 AT5G14800 62.609 230 66 3 1 225 1 215 1.04e-92 274

Find 123 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCTTATATCCCAATTATT+TGG 0.065210 7:+77395987 MsG0780040428.01.T01:CDS
CAAAATGACAGCATAATATT+TGG 0.114265 7:+77396089 MsG0780040428.01.T01:CDS
TGCCTATAGTATGTCAAATT+AGG 0.153266 7:+77397538 MsG0780040428.01.T01:three_prime_UTR
TGCCAATTGACCCAAATAAT+TGG 0.166849 7:-77395998 None:intergenic
TTGGGTCAATTGGCAAAATA+TGG 0.198828 7:+77396006 MsG0780040428.01.T01:CDS
TGATTTCCATGTTTGGTTAA+AGG 0.229498 7:-77393681 None:intergenic
TCCAGGGTGCTTCCCACTTT+GGG 0.250269 7:-77397322 None:intergenic
GGCGCCTTTGGCAATGCTTT+CGG 0.293472 7:-77393758 None:intergenic
GGCGGAGCGGACGGCGCCTT+TGG 0.302558 7:-77393770 None:intergenic
GATTTCCATGTTTGGTTAAA+GGG 0.305984 7:-77393680 None:intergenic
ACTTGACAGATTATGATATC+TGG 0.308376 7:-77397911 None:intergenic
CTTCATCGGCGCCGGTAAAA+TGG 0.309836 7:+77393735 MsG0780040428.01.T01:CDS
ATCTTATATCCCAATTATTT+GGG 0.310853 7:+77395988 MsG0780040428.01.T01:CDS
CTGGCCACGAAAGGTTTATA+AGG 0.313169 7:+77394807 MsG0780040428.01.T01:CDS
TCTTACTAAGGATAAGCTTT+TGG 0.327843 7:+77394135 MsG0780040428.01.T01:CDS
TCCCAATTATTTGGGTCAAT+TGG 0.337352 7:+77395996 MsG0780040428.01.T01:CDS
GCCTATAGTATGTCAAATTA+GGG 0.338792 7:+77397539 MsG0780040428.01.T01:three_prime_UTR
ACCATGACAGTTATGAGCTT+GGG 0.344195 7:+77395939 MsG0780040428.01.T01:intron
TTTACGAATGCTACTAGTTA+TGG 0.355190 7:+77397620 MsG0780040428.01.T01:three_prime_UTR
AATCAAGATGAAAGATCTTC+AGG 0.362073 7:+77394174 MsG0780040428.01.T01:CDS
CATGCGTTTGAAAAGTTGTA+AGG 0.364803 7:+77397876 MsG0780040428.01.T01:three_prime_UTR
TCGAAGGCGGTACGGCGAGC+GGG 0.369202 7:-77393835 None:intergenic
GTCCAGGGTGCTTCCCACTT+TGG 0.369206 7:-77397323 None:intergenic
GCCAATTGACCCAAATAATT+GGG 0.377637 7:-77395997 None:intergenic
ATCGGAATGATTTCCATGTT+TGG 0.378561 7:-77393688 None:intergenic
ATTGAAGCCGCTTCTTACTA+AGG 0.384032 7:+77394123 MsG0780040428.01.T01:CDS
GTTTCGCAAACATTATGAAT+AGG 0.384318 7:+77397673 MsG0780040428.01.T01:three_prime_UTR
CCTGGTGGGACAACAATTGC+AGG 0.388441 7:+77397369 MsG0780040428.01.T01:CDS
TAATAATACGTCGTCGTTTG+AGG 0.391161 7:-77393881 None:intergenic
ACGTCATCCTTGAGCTGTCC+AGG 0.402382 7:-77397339 None:intergenic
AACTGTTATTCTCTGCTAAT+CGG 0.402598 7:-77397653 None:intergenic
CCAACTGTAGCAGCTGTGTT+AGG 0.404479 7:-77394836 None:intergenic
AAAATGACAGCATAATATTT+GGG 0.404587 7:+77396090 MsG0780040428.01.T01:CDS
ATCTGTCAAGTGTTTCAAAT+AGG 0.408136 7:+77397923 MsG0780040428.01.T01:three_prime_UTR
TTATTTAGCAATAGAGGCTC+TGG 0.408489 7:+77396515 MsG0780040428.01.T01:CDS
TTATATTTATTTAGCAATAG+AGG 0.421387 7:+77396509 MsG0780040428.01.T01:CDS
AAAATTGTGAATTAACTTTG+TGG 0.422943 7:-77397969 None:intergenic
GCAATAGAGGCTCTGGCTGA+TGG 0.464263 7:+77396522 MsG0780040428.01.T01:CDS
ACAGTTGGCGAGGCAGCGTC+AGG 0.464603 7:+77394851 MsG0780040428.01.T01:CDS
CCCTGGCTAATCAATCGGCC+AGG 0.467777 7:-77397722 None:intergenic
CTCGAAGGCGGTACGGCGAG+CGG 0.467895 7:-77393836 None:intergenic
AATTGCAGGCGTTCATGAGT+TGG 0.479085 7:+77397383 MsG0780040428.01.T01:CDS
AAGGATGACGTCACTTCTCC+TGG 0.479632 7:+77397351 MsG0780040428.01.T01:CDS
ATCAACCCTGGCTAATCAAT+CGG 0.482390 7:-77397727 None:intergenic
CCCTGGCCGATTGATTAGCC+AGG 0.487893 7:+77397721 MsG0780040428.01.T01:three_prime_UTR
AAATGAGATTTGCGTACCTC+AGG 0.491535 7:-77396064 None:intergenic
GGATAAGACGGCGGAGCGGA+CGG 0.492841 7:-77393779 None:intergenic
TCCTACACACTCGGCTTCAT+CGG 0.494163 7:+77393721 MsG0780040428.01.T01:CDS
AACCATGACAGTTATGAGCT+TGG 0.498496 7:+77395938 MsG0780040428.01.T01:intron
AGGGTGCTTCCCACTTTGGG+TGG 0.502570 7:-77397319 None:intergenic
TACTAAAGCATAGGAGCACT+TGG 0.507271 7:+77397770 MsG0780040428.01.T01:three_prime_UTR
TTACCCTTATAAACCTTTCG+TGG 0.507863 7:-77394811 None:intergenic
CTACTAGTTATGGACGAGCT+TGG 0.508539 7:+77397630 MsG0780040428.01.T01:three_prime_UTR
TTTCAAATAGGAGGTTAGAA+TGG 0.511104 7:+77397935 MsG0780040428.01.T01:three_prime_UTR
AGCTTATCCTTAGTAAGAAG+CGG 0.511647 7:-77394130 None:intergenic
ACCCTAATTTGACATACTAT+AGG 0.514557 7:-77397540 None:intergenic
GGCATTTAAACGAAACAAGC+TGG 0.516695 7:-77397847 None:intergenic
ATTGCTAAATAAATATAAGC+AGG 0.516726 7:-77396504 None:intergenic
TCATTCCCTTTAACCAAACA+TGG 0.516822 7:+77393675 MsG0780040428.01.T01:exon
GGTATTAGGAGCAGCATCAA+TGG 0.520329 7:+77397296 MsG0780040428.01.T01:intron
CCGAGTGTGTAGGAATCGGC+GGG 0.521156 7:-77393712 None:intergenic
TGTGAATTGTGCAGTGGGAG+TGG 0.521157 7:+77396480 MsG0780040428.01.T01:intron
CCTGCAATTGTTGTCCCACC+AGG 0.521909 7:-77397369 None:intergenic
GTGTAGGAATCGGCGGGGAT+CGG 0.525568 7:-77393706 None:intergenic
TGTCAAGTGTTTCAAATAGG+AGG 0.528085 7:+77397926 MsG0780040428.01.T01:three_prime_UTR
GCTGATGGAGGAGTAGCAGC+TGG 0.532067 7:+77396537 MsG0780040428.01.T01:CDS
TATAGACTCAGGAAAGCTCT+TGG 0.532116 7:-77397464 None:intergenic
TGCATAATTGCATATACAAG+TGG 0.534155 7:-77397808 None:intergenic
CATAAAATGTAGGAATGGGC+TGG 0.536449 7:+77394788 MsG0780040428.01.T01:intron
TGGCCACGAAAGGTTTATAA+GGG 0.539622 7:+77394808 MsG0780040428.01.T01:CDS
CGTCACTGTGTCTGTCTGTG+TGG 0.541423 7:+77393633 MsG0780040428.01.T01:five_prime_UTR
TAAACAGAAGAATGTTGCTA+TGG 0.550300 7:-77397601 None:intergenic
TACGGCGAGCGGGGTTAGAG+TGG 0.552733 7:-77393825 None:intergenic
GTCACTGTGTCTGTCTGTGT+GGG 0.555209 7:+77393634 MsG0780040428.01.T01:five_prime_UTR
GAAGCCGAGTGTGTAGGAAT+CGG 0.562684 7:-77393716 None:intergenic
GCCGAGTGTGTAGGAATCGG+CGG 0.567052 7:-77393713 None:intergenic
GAAGCACCCTGGACAGCTCA+AGG 0.568900 7:+77397332 MsG0780040428.01.T01:CDS
CTCTTGGCTGCGTTTAGCAG+CGG 0.570321 7:-77397448 None:intergenic
GCGAGCGGGGTTAGAGTGGA+TGG 0.573466 7:-77393821 None:intergenic
CGATGGACTCGAAGGCGGTA+CGG 0.574578 7:-77393843 None:intergenic
CCTGGCTAATCAATCGGCCA+GGG 0.575054 7:-77397721 None:intergenic
ATACGTCGTCGTTTGAGGAA+AGG 0.576899 7:-77393876 None:intergenic
GAAGATGATTACTAAAGCAT+AGG 0.579650 7:+77397761 MsG0780040428.01.T01:three_prime_UTR
CCATGACAGTTATGAGCTTG+GGG 0.580375 7:+77395940 MsG0780040428.01.T01:intron
GGATCCTCATCTATAGACTC+AGG 0.581551 7:-77397475 None:intergenic
ACCCAAAGTGGGAAGCACCC+TGG 0.583425 7:+77397321 MsG0780040428.01.T01:CDS
CGAAGGCGGTACGGCGAGCG+GGG 0.585209 7:-77393834 None:intergenic
GCATCAATGGCCACCCAAAG+TGG 0.590578 7:+77397309 MsG0780040428.01.T01:CDS
CGTCATCCTTGAGCTGTCCA+GGG 0.592740 7:-77397338 None:intergenic
CCTGGCCGATTGATTAGCCA+GGG 0.596297 7:+77397722 MsG0780040428.01.T01:three_prime_UTR
CCTAACACAGCTGCTACAGT+TGG 0.597694 7:+77394836 MsG0780040428.01.T01:CDS
AGGAATGGGCTGGCCACGAA+AGG 0.597807 7:+77394798 MsG0780040428.01.T01:intron
CGTACCGCCTTCGAGTCCAT+CGG 0.599300 7:+77393844 MsG0780040428.01.T01:CDS
ATGCTTTAGTAATCAACCCC+TGG 0.600308 7:+77397704 MsG0780040428.01.T01:three_prime_UTR
CACAGCTGCTACAGTTGGCG+AGG 0.605014 7:+77394841 MsG0780040428.01.T01:CDS
TGAGGTTGTTGCTGCAGTGA+AGG 0.606416 7:+77394087 MsG0780040428.01.T01:CDS
ACACTCGGCTTCATCGGCGC+CGG 0.610968 7:+77393727 MsG0780040428.01.T01:CDS
TTATGATATCTGGTTTGATG+TGG 0.612559 7:-77397901 None:intergenic
GATGCGAGAAGGGGATAAGA+CGG 0.621903 7:-77393791 None:intergenic
CTTTCCTGAGTCTATAGATG+AGG 0.623490 7:+77397471 MsG0780040428.01.T01:exon
CATCAATGGCCACCCAAAGT+GGG 0.624413 7:+77397310 MsG0780040428.01.T01:CDS
GGAAAGGACAGTGACGCCGA+TGG 0.624846 7:-77393860 None:intergenic
CCCGCCGATTCCTACACACT+CGG 0.627672 7:+77393712 MsG0780040428.01.T01:CDS
CTGTAAAGAAACATCAACCC+TGG 0.627953 7:-77397739 None:intergenic
GCCGATGAAGCCGAGTGTGT+AGG 0.630652 7:-77393722 None:intergenic
AGTGACGCCGATGGACTCGA+AGG 0.633838 7:-77393851 None:intergenic
ATGACAGTTATGAGCTTGGG+GGG 0.634411 7:+77395942 MsG0780040428.01.T01:intron
ATGACGTCACTTCTCCTGGT+GGG 0.634774 7:+77397355 MsG0780040428.01.T01:CDS
AAGGGGATAAGACGGCGGAG+CGG 0.637478 7:-77393783 None:intergenic
ATAGAGGCTCTGGCTGATGG+AGG 0.637803 7:+77396525 MsG0780040428.01.T01:CDS
CAGCATTCATCAGTATTCCA+CGG 0.658283 7:-77397419 None:intergenic
ATGGCCGAAAGCATTGCCAA+AGG 0.661478 7:+77393754 MsG0780040428.01.T01:CDS
CACACAGACAGACACAGTGA+CGG 0.662081 7:-77393632 None:intergenic
AGCGGGGTTAGAGTGGATGG+CGG 0.663676 7:-77393818 None:intergenic
AGACTTAATGCAAGATCACG+TGG 0.668367 7:-77396564 None:intergenic
CTGGCTAATCAATCGGCCAG+GGG 0.671832 7:-77397720 None:intergenic
TTGATGCAATAACTGGCCTG+AGG 0.672051 7:+77396048 MsG0780040428.01.T01:CDS
GACGCCGATGGACTCGAAGG+CGG 0.675901 7:-77393848 None:intergenic
GATGACGTCACTTCTCCTGG+TGG 0.681064 7:+77397354 MsG0780040428.01.T01:CDS
ATTTAAACGAAACAAGCTGG+AGG 0.702980 7:-77397844 None:intergenic
CATGACAGTTATGAGCTTGG+GGG 0.705785 7:+77395941 MsG0780040428.01.T01:intron
GCGAGAAGGGGATAAGACGG+CGG 0.720960 7:-77393788 None:intergenic
CGAGTGTGTAGGAATCGGCG+GGG 0.729561 7:-77393711 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATTTATAATGTTTCAT+TGG + Chr7:77396903-77396922 MsG0780040428.01.T01:intron 10.0%
!!! TTAAATTTTAAACTCTTTTT+TGG + Chr7:77394642-77394661 MsG0780040428.01.T01:intron 10.0%
!! AAACTCAAAAAATAGAAAAA+TGG + Chr7:77395434-77395453 MsG0780040428.01.T01:intron 15.0%
!! TAAAAAGTTAATATATTCTG+AGG + Chr7:77394389-77394408 MsG0780040428.01.T01:intron 15.0%
!! TAATATAAATTGTCAATTTC+AGG + Chr7:77394451-77394470 MsG0780040428.01.T01:intron 15.0%
!! TTATATTTATTTAGCAATAG+AGG + Chr7:77396509-77396528 MsG0780040428.01.T01:CDS 15.0%
!!! AAATTTCATTTTATCTTTGA+TGG + Chr7:77396133-77396152 MsG0780040428.01.T01:intron 15.0%
!!! AAATTTTAAACACAGTTAAA+TGG - Chr7:77396624-77396643 None:intergenic 15.0%
!!! ATTTAACTGTGTTTAAAATT+TGG + Chr7:77396623-77396642 MsG0780040428.01.T01:intron 15.0%
!!! ATTTTTCATTTCTTTAAATC+TGG - Chr7:77396700-77396719 None:intergenic 15.0%
!!! TATAGCTTAATTTATCATTT+TGG + Chr7:77394226-77394245 MsG0780040428.01.T01:intron 15.0%
!!! TTTAACTGTGTTTAAAATTT+GGG + Chr7:77396624-77396643 MsG0780040428.01.T01:intron 15.0%
!!! TTTTTCATTTCTTTAAATCT+GGG - Chr7:77396699-77396718 None:intergenic 15.0%
!! AAAATGACAGCATAATATTT+GGG + Chr7:77396090-77396109 MsG0780040428.01.T01:CDS 20.0%
!! AAAATTGTGAATTAACTTTG+TGG - Chr7:77397972-77397991 None:intergenic 20.0%
!! AATCTGTAAAACTAAAGAAA+AGG - Chr7:77394731-77394750 None:intergenic 20.0%
!! AATCTTATATCCCAATTATT+TGG + Chr7:77395987-77396006 MsG0780040428.01.T01:CDS 20.0%
!! AGAGAATTTCTTGAAAAATT+TGG + Chr7:77395043-77395062 MsG0780040428.01.T01:intron 20.0%
!! AGATAAAATGAAATTTCTTG+TGG - Chr7:77396129-77396148 None:intergenic 20.0%
!! AGCTAAGAATAAGAATTATA+TGG - Chr7:77396251-77396270 None:intergenic 20.0%
!! ATCTTATATCCCAATTATTT+GGG + Chr7:77395988-77396007 MsG0780040428.01.T01:CDS 20.0%
!! ATGAATGAGAAAATGATAAA+AGG - Chr7:77393942-77393961 None:intergenic 20.0%
!! ATTGCTAAATAAATATAAGC+AGG - Chr7:77396507-77396526 None:intergenic 20.0%
!! GAATAAGTTAATATATTCTC+AGG + Chr7:77394316-77394335 MsG0780040428.01.T01:intron 20.0%
!! GCTAAGAATAAGAATTATAT+GGG - Chr7:77396250-77396269 None:intergenic 20.0%
!! TAAAAATATAGTTCAACTGT+CGG + Chr7:77398031-77398050 MsG0780040428.01.T01:three_prime_UTR 20.0%
!! TTAAATTCCTTATTCATTGT+TGG - Chr7:77396965-77396984 None:intergenic 20.0%
!!! AACCTTGTCTTTTTATTTAT+TGG - Chr7:77397119-77397138 None:intergenic 20.0%
!!! AATTTTCACTTAGAAATCAT+AGG - Chr7:77397499-77397518 None:intergenic 20.0%
!!! ACCTTGTCTTTTTATTTATT+GGG - Chr7:77397118-77397137 None:intergenic 20.0%
!!! ATAGTATGTGATAATGATTT+TGG + Chr7:77395648-77395667 MsG0780040428.01.T01:intron 20.0%
!!! ATAGTTGTTTCATAAAATGT+AGG + Chr7:77394778-77394797 MsG0780040428.01.T01:intron 20.0%
! AAAATGTTCCAATATAAGTG+AGG - Chr7:77397228-77397247 None:intergenic 25.0%
! AAAATTAAACAAAGGGTTCT+TGG + Chr7:77394572-77394591 MsG0780040428.01.T01:intron 25.0%
! AAATAAAAAGACAAGGTTAC+AGG + Chr7:77397121-77397140 MsG0780040428.01.T01:intron 25.0%
! AAATGAGTTAATGAATCAGA+GGG + Chr7:77394607-77394626 MsG0780040428.01.T01:intron 25.0%
! AACAGAGAAATACATAATTG+AGG - Chr7:77394028-77394047 None:intergenic 25.0%
! AATAAAAAGACAAGGTTACA+GGG + Chr7:77397122-77397141 MsG0780040428.01.T01:intron 25.0%
! ATAAATGTAGACAAACTAGT+TGG + Chr7:77397045-77397064 MsG0780040428.01.T01:intron 25.0%
! ATTACATAATGCATAAGAGA+AGG - Chr7:77395817-77395836 None:intergenic 25.0%
! CAAAATGACAGCATAATATT+TGG + Chr7:77396089-77396108 MsG0780040428.01.T01:CDS 25.0%
! GCTGTAAAAAAAATAGTTGA+TGG + Chr7:77394506-77394525 MsG0780040428.01.T01:intron 25.0%
! GTAATTGTCAACAATGTAAA+CGG - Chr7:77395888-77395907 None:intergenic 25.0%
! GTTGTTAATTATGACAACAA+GGG + Chr7:77395289-77395308 MsG0780040428.01.T01:intron 25.0%
! GTTTCATAAAATGTAGGAAT+GGG + Chr7:77394784-77394803 MsG0780040428.01.T01:intron 25.0%
! TAAATGAGTTAATGAATCAG+AGG + Chr7:77394606-77394625 MsG0780040428.01.T01:intron 25.0%
! TATAAACTCCATAAGCTTAT+TGG - Chr7:77394210-77394229 None:intergenic 25.0%
! TCTTAAAGTGTAGTAAACAT+TGG - Chr7:77394882-77394901 None:intergenic 25.0%
! TGTTTCATAAAATGTAGGAA+TGG + Chr7:77394783-77394802 MsG0780040428.01.T01:intron 25.0%
! TTGACAATTACAAAATTGTG+TGG + Chr7:77395897-77395916 MsG0780040428.01.T01:intron 25.0%
! TTGTTAATTATGACAACAAG+GGG + Chr7:77395290-77395309 MsG0780040428.01.T01:intron 25.0%
!! ATACAATTTAAAACTGTACC+TGG - Chr7:77395404-77395423 None:intergenic 25.0%
!! ATATCTGTGATTGATACTTT+TGG + Chr7:77395337-77395356 MsG0780040428.01.T01:intron 25.0%
!! TACAATTTAAAACTGTACCT+GGG - Chr7:77395403-77395422 None:intergenic 25.0%
!! TATCTGTGATTGATACTTTT+GGG + Chr7:77395338-77395357 MsG0780040428.01.T01:intron 25.0%
!!! AAGTATTTTGATGCAATAAC+TGG + Chr7:77396041-77396060 MsG0780040428.01.T01:CDS 25.0%
!!! AATCTGGGATTTTAACAAAA+TGG - Chr7:77396684-77396703 None:intergenic 25.0%
!!! ATCTGGGATTTTAACAAAAT+GGG - Chr7:77396683-77396702 None:intergenic 25.0%
!!! ATTGTCTTTTTTCTCTGTTT+TGG + Chr7:77396342-77396361 MsG0780040428.01.T01:intron 25.0%
!!! GCTTTTAAGTAAGTTGAAAA+GGG + Chr7:77396838-77396857 MsG0780040428.01.T01:intron 25.0%
!!! GTTTTAGTTTGTTTATTCTG+AGG + Chr7:77398008-77398027 MsG0780040428.01.T01:three_prime_UTR 25.0%
!!! TGTGTTTTTCTAGAATACAA+TGG + Chr7:77395846-77395865 MsG0780040428.01.T01:intron 25.0%
!!! TTAGTTTTACAGATTTAGCT+CGG + Chr7:77394736-77394755 MsG0780040428.01.T01:intron 25.0%
!!! TTGTTTTAATCTTGGAAAAC+TGG - Chr7:77396812-77396831 None:intergenic 25.0%
!!! TTTTATTTATTGGGCTTCTT+TGG - Chr7:77397109-77397128 None:intergenic 25.0%
AACACAGTTAAATGGTCAAA+AGG - Chr7:77396616-77396635 None:intergenic 30.0%
AACTGTTATTCTCTGCTAAT+CGG - Chr7:77397656-77397675 None:intergenic 30.0%
AAGCATGCAAATATATTCCT+AGG - Chr7:77395593-77395612 None:intergenic 30.0%
AATCAAGATGAAAGATCTTC+AGG + Chr7:77394174-77394193 MsG0780040428.01.T01:CDS 30.0%
ACCAAATTCCAATAAGCTTA+TGG + Chr7:77394199-77394218 MsG0780040428.01.T01:intron 30.0%
ACCCTAATTTGACATACTAT+AGG - Chr7:77397543-77397562 None:intergenic 30.0%
ACTTGACAGATTATGATATC+TGG - Chr7:77397914-77397933 None:intergenic 30.0%
AGTGTGAATTTGTGAAGAAA+AGG + Chr7:77394280-77394299 MsG0780040428.01.T01:intron 30.0%
ATCTGTCAAGTGTTTCAAAT+AGG + Chr7:77397923-77397942 MsG0780040428.01.T01:three_prime_UTR 30.0%
ATTTATGTGAATTGTGCAGT+GGG + Chr7:77396475-77396494 MsG0780040428.01.T01:intron 30.0%
CAACACAGTTGTAATAAAGA+GGG - Chr7:77393913-77393932 None:intergenic 30.0%
GAAGATGATTACTAAAGCAT+AGG + Chr7:77397761-77397780 MsG0780040428.01.T01:three_prime_UTR 30.0%
GAATGTAACATTCACATGTT+TGG - Chr7:77395557-77395576 None:intergenic 30.0%
GATTTCCATGTTTGGTTAAA+GGG - Chr7:77393683-77393702 None:intergenic 30.0%
GCCCAATAAATAAAAAGACA+AGG + Chr7:77397114-77397133 MsG0780040428.01.T01:intron 30.0%
GCCTATAGTATGTCAAATTA+GGG + Chr7:77397539-77397558 MsG0780040428.01.T01:three_prime_UTR 30.0%
GGTAAATAATCTCAATTGTG+AGG + Chr7:77395756-77395775 MsG0780040428.01.T01:intron 30.0%
GGTTGTTAATTATGACAACA+AGG + Chr7:77395288-77395307 MsG0780040428.01.T01:intron 30.0%
GTTTCGCAAACATTATGAAT+AGG + Chr7:77397673-77397692 MsG0780040428.01.T01:three_prime_UTR 30.0%
TAAACAGAAGAATGTTGCTA+TGG - Chr7:77397604-77397623 None:intergenic 30.0%
TATTTATGTGAATTGTGCAG+TGG + Chr7:77396474-77396493 MsG0780040428.01.T01:intron 30.0%
TCCAAGATTAAAACAACTTC+TGG + Chr7:77396816-77396835 MsG0780040428.01.T01:intron 30.0%
TCCATAAGCTTATTGGAATT+TGG - Chr7:77394203-77394222 None:intergenic 30.0%
TGATTTCCATGTTTGGTTAA+AGG - Chr7:77393684-77393703 None:intergenic 30.0%
TGCATAATTGCATATACAAG+TGG - Chr7:77397811-77397830 None:intergenic 30.0%
TGCCTATAGTATGTCAAATT+AGG + Chr7:77397538-77397557 MsG0780040428.01.T01:three_prime_UTR 30.0%
TGTTAATTATGACAACAAGG+GGG + Chr7:77395291-77395310 MsG0780040428.01.T01:intron 30.0%
TGTTACTAACTTACTATGAG+AGG + Chr7:77395260-77395279 MsG0780040428.01.T01:intron 30.0%
TGTTTAACTCATCTCAAAGA+AGG - Chr7:77397566-77397585 None:intergenic 30.0%
TTTACGAATGCTACTAGTTA+TGG + Chr7:77397620-77397639 MsG0780040428.01.T01:three_prime_UTR 30.0%
TTTCAAATAGGAGGTTAGAA+TGG + Chr7:77397935-77397954 MsG0780040428.01.T01:three_prime_UTR 30.0%
TTTCAGGAATAATGCAGAAT+CGG - Chr7:77396409-77396428 None:intergenic 30.0%
! AAGGTATCCAACAATGAATA+AGG + Chr7:77396955-77396974 MsG0780040428.01.T01:intron 30.0%
! TCTTACTAAGGATAAGCTTT+TGG + Chr7:77394135-77394154 MsG0780040428.01.T01:CDS 30.0%
! TTATGATATCTGGTTTGATG+TGG - Chr7:77397904-77397923 None:intergenic 30.0%
! TTTGATGGACAAAAATTCTG+AGG + Chr7:77396148-77396167 MsG0780040428.01.T01:intron 30.0%
!! GGCTTTTAAGTAAGTTGAAA+AGG + Chr7:77396837-77396856 MsG0780040428.01.T01:intron 30.0%
!! TTGGTCTTCACTTTTATGAA+AGG + Chr7:77395667-77395686 MsG0780040428.01.T01:intron 30.0%
AAACGACTTTGATTCCCTAT+TGG + Chr7:77395500-77395519 MsG0780040428.01.T01:intron 35.0%
AAATCCAAACCGATCCAATA+GGG - Chr7:77395517-77395536 None:intergenic 35.0%
AACTTACTATGAGAGGAAGA+TGG + Chr7:77395267-77395286 MsG0780040428.01.T01:intron 35.0%
ACTTTGATTCCCTATTGGAT+CGG + Chr7:77395505-77395524 MsG0780040428.01.T01:intron 35.0%
AGCTAGTTGTTGTGTTTACT+GGG + Chr7:77396998-77397017 MsG0780040428.01.T01:intron 35.0%
AGCTTATCCTTAGTAAGAAG+CGG - Chr7:77394133-77394152 None:intergenic 35.0%
ATCGGAATGATTTCCATGTT+TGG - Chr7:77393691-77393710 None:intergenic 35.0%
ATGGTAGAATGTGATGAAAC+TGG + Chr7:77395453-77395472 MsG0780040428.01.T01:intron 35.0%
ATTACCATCAACCAAAGTCT+TGG - Chr7:77395630-77395649 None:intergenic 35.0%
ATTCCTAGGAAAGTGAGATT+GGG - Chr7:77395579-77395598 None:intergenic 35.0%
ATTTAAACGAAACAAGCTGG+AGG - Chr7:77397847-77397866 None:intergenic 35.0%
CACTATGCAATATCTTGTAG+GGG + Chr7:77397187-77397206 MsG0780040428.01.T01:intron 35.0%
CATGCGTTTGAAAAGTTGTA+AGG + Chr7:77397876-77397895 MsG0780040428.01.T01:three_prime_UTR 35.0%
CATTGGGCATTAGATTATCT+TGG - Chr7:77395137-77395156 None:intergenic 35.0%
CCACTATGCAATATCTTGTA+GGG + Chr7:77397186-77397205 MsG0780040428.01.T01:intron 35.0%
CCTACAAGATATTGCATAGT+GGG - Chr7:77397188-77397207 None:intergenic 35.0%
GCAACACAGTTGTAATAAAG+AGG - Chr7:77393914-77393933 None:intergenic 35.0%
GCCAATTGACCCAAATAATT+GGG - Chr7:77396000-77396019 None:intergenic 35.0%
GTCAACAATGTAAACGGATA+AGG - Chr7:77395882-77395901 None:intergenic 35.0%
TAATAATACGTCGTCGTTTG+AGG - Chr7:77393884-77393903 None:intergenic 35.0%
TAGTGATGCGCAAATTACAT+GGG + Chr7:77395735-77395754 MsG0780040428.01.T01:intron 35.0%
TATTCCTAGGAAAGTGAGAT+TGG - Chr7:77395580-77395599 None:intergenic 35.0%
TCAAGAGAACAACTGTATGT+AGG - Chr7:77397255-77397274 None:intergenic 35.0%
TCATTCCCTTTAACCAAACA+TGG + Chr7:77393675-77393694 MsG0780040428.01.T01:exon 35.0%
TCCCAATTATTTGGGTCAAT+TGG + Chr7:77395996-77396015 MsG0780040428.01.T01:CDS 35.0%
TCTGCATACCTCACTTATAT+TGG + Chr7:77397217-77397236 MsG0780040428.01.T01:intron 35.0%
TGAAACTGGGTTGTTATAGT+TGG + Chr7:77395467-77395486 MsG0780040428.01.T01:intron 35.0%
TGCCAATTGACCCAAATAAT+TGG - Chr7:77396001-77396020 None:intergenic 35.0%
TGGTAGAATGTGATGAAACT+GGG + Chr7:77395454-77395473 MsG0780040428.01.T01:intron 35.0%
TGTCAAGTGTTTCAAATAGG+AGG + Chr7:77397926-77397945 MsG0780040428.01.T01:three_prime_UTR 35.0%
TTACCCTTATAAACCTTTCG+TGG - Chr7:77394814-77394833 None:intergenic 35.0%
TTATTTAGCAATAGAGGCTC+TGG + Chr7:77396515-77396534 MsG0780040428.01.T01:CDS 35.0%
TTCAGGAATAATGCAGAATC+GGG - Chr7:77396408-77396427 None:intergenic 35.0%
TTGGGTCAATTGGCAAAATA+TGG + Chr7:77396006-77396025 MsG0780040428.01.T01:CDS 35.0%
! CTTTTCAAACGCATGAAGAT+TGG - Chr7:77397871-77397890 None:intergenic 35.0%
! GTTGAAAAGGGCGAAAATTT+TGG + Chr7:77396850-77396869 MsG0780040428.01.T01:intron 35.0%
!! AAAAGGGCGAAAATTTTGGT+GGG + Chr7:77396854-77396873 MsG0780040428.01.T01:intron 35.0%
!! AGAACAAAAGAAGAGTGTCT+GGG + Chr7:77396293-77396312 MsG0780040428.01.T01:intron 35.0%
!! GTCTTCACTTTTATGAAAGG+TGG + Chr7:77395670-77395689 MsG0780040428.01.T01:intron 35.0%
!!! GCCAGAAGTTGTTTTAATCT+TGG - Chr7:77396820-77396839 None:intergenic 35.0%
AAATGAGATTTGCGTACCTC+AGG - Chr7:77396067-77396086 None:intergenic 40.0%
AACCATGACAGTTATGAGCT+TGG + Chr7:77395938-77395957 MsG0780040428.01.T01:intron 40.0%
AACCCACATAAATTGACACC+AGG - Chr7:77394352-77394371 None:intergenic 40.0%
AATAATGCAGAATCGGGTAG+AGG - Chr7:77396402-77396421 None:intergenic 40.0%
AATTTGGGTGATGCTTGCTT+TGG + Chr7:77396639-77396658 MsG0780040428.01.T01:intron 40.0%
ACCATGACAGTTATGAGCTT+GGG + Chr7:77395939-77395958 MsG0780040428.01.T01:intron 40.0%
ACCCACATAAATTGACACCA+GGG - Chr7:77394351-77394370 None:intergenic 40.0%
ACTACTATATGCCTATCAGC+AGG - Chr7:77397083-77397102 None:intergenic 40.0%
AGACTTAATGCAAGATCACG+TGG - Chr7:77396567-77396586 None:intergenic 40.0%
AGATAGACTCCAGAACACAT+TGG - Chr7:77395154-77395173 None:intergenic 40.0%
AGCTCATAACTGTCATGGTT+TGG - Chr7:77395938-77395957 None:intergenic 40.0%
ATCAACCCTGGCTAATCAAT+CGG - Chr7:77397730-77397749 None:intergenic 40.0%
ATCTAATGCCCAATGTGTTC+TGG + Chr7:77395142-77395161 MsG0780040428.01.T01:intron 40.0%
ATGCTTTAGTAATCAACCCC+TGG + Chr7:77397704-77397723 MsG0780040428.01.T01:three_prime_UTR 40.0%
ATTATTCCTGAAAACCCCCA+CGG + Chr7:77396416-77396435 MsG0780040428.01.T01:intron 40.0%
ATTCCCAATCTCACTTTCCT+AGG + Chr7:77395573-77395592 MsG0780040428.01.T01:intron 40.0%
ATTGAAGCCGCTTCTTACTA+AGG + Chr7:77394123-77394142 MsG0780040428.01.T01:CDS 40.0%
CAAATCCAAACCGATCCAAT+AGG - Chr7:77395518-77395537 None:intergenic 40.0%
CAGCATTCATCAGTATTCCA+CGG - Chr7:77397422-77397441 None:intergenic 40.0%
CAGCTAGTTGTTGTGTTTAC+TGG + Chr7:77396997-77397016 MsG0780040428.01.T01:intron 40.0%
CATAAAATGTAGGAATGGGC+TGG + Chr7:77394788-77394807 MsG0780040428.01.T01:intron 40.0%
CCCACTATGCAATATCTTGT+AGG + Chr7:77397185-77397204 MsG0780040428.01.T01:intron 40.0%
CCCTACAAGATATTGCATAG+TGG - Chr7:77397189-77397208 None:intergenic 40.0%
CTGAGATAAGTCACAACACA+GGG - Chr7:77394950-77394969 None:intergenic 40.0%
CTGTAAAGAAACATCAACCC+TGG - Chr7:77397742-77397761 None:intergenic 40.0%
CTTGTATCACACCACTATCA+TGG - Chr7:77396185-77396204 None:intergenic 40.0%
CTTTCCTGAGTCTATAGATG+AGG + Chr7:77397471-77397490 MsG0780040428.01.T01:exon 40.0%
GATAGACTCCAGAACACATT+GGG - Chr7:77395153-77395172 None:intergenic 40.0%
GGAAAATTGCTTCTTACCCA+CGG + Chr7:77394527-77394546 MsG0780040428.01.T01:intron 40.0%
GGACCTGAAAATGTTCTGTT+GGG + Chr7:77396314-77396333 MsG0780040428.01.T01:intron 40.0%
GGCATTTAAACGAAACAAGC+TGG - Chr7:77397850-77397869 None:intergenic 40.0%
GTAGTGATGCGCAAATTACA+TGG + Chr7:77395734-77395753 MsG0780040428.01.T01:intron 40.0%
GTGACTTATCTCAGATCACT+TGG + Chr7:77394956-77394975 MsG0780040428.01.T01:intron 40.0%
TAAGAGATGCTCCATGATAG+TGG + Chr7:77396171-77396190 MsG0780040428.01.T01:intron 40.0%
TATAGACTCAGGAAAGCTCT+TGG - Chr7:77397467-77397486 None:intergenic 40.0%
TGGCCACGAAAGGTTTATAA+GGG + Chr7:77394808-77394827 MsG0780040428.01.T01:CDS 40.0%
TTCTCTAGTATGATAGACCC+AGG + Chr7:77395383-77395402 MsG0780040428.01.T01:intron 40.0%
TTGGATACCTTTATCGAGCA+TGG - Chr7:77396946-77396965 None:intergenic 40.0%
! ACGTGTGTTTTCCAGGTATT+AGG + Chr7:77397282-77397301 MsG0780040428.01.T01:intron 40.0%
! CGTTCATGAGTTGGAAAAAG+CGG + Chr7:77397392-77397411 MsG0780040428.01.T01:CDS 40.0%
! CTTATGTACGTGTGTTTTCC+AGG + Chr7:77397275-77397294 MsG0780040428.01.T01:intron 40.0%
! GAAAAGGGCGAAAATTTTGG+TGG + Chr7:77396853-77396872 MsG0780040428.01.T01:intron 40.0%
! GTTCATGAGTTGGAAAAAGC+GGG + Chr7:77397393-77397412 MsG0780040428.01.T01:CDS 40.0%
! TCACCCAACAGAACATTTTC+AGG - Chr7:77396320-77396339 None:intergenic 40.0%
! TCCCTGGTGTCAATTTATGT+GGG + Chr7:77394347-77394366 MsG0780040428.01.T01:intron 40.0%
! TCTGAGATAAGTCACAACAC+AGG - Chr7:77394951-77394970 None:intergenic 40.0%
! TTCCAAATATTAAGCGCCGT+GGG - Chr7:77394546-77394565 None:intergenic 40.0%
! TTTCCAAATATTAAGCGCCG+TGG - Chr7:77394547-77394566 None:intergenic 40.0%
! TTTTGGTCATGTGTCTACGT+GGG + Chr7:77396359-77396378 MsG0780040428.01.T01:intron 40.0%
!! AATGCTTTCGGCCATTTTAC+CGG - Chr7:77393749-77393768 None:intergenic 40.0%
!! ACACCAAAGTTGTTTTACCG+TGG - Chr7:77396436-77396455 None:intergenic 40.0%
!! ACCAAAGTTGTTTTACCGTG+GGG - Chr7:77396434-77396453 None:intergenic 40.0%
!! CACCAAAGTTGTTTTACCGT+GGG - Chr7:77396435-77396454 None:intergenic 40.0%
!! CATGATAGTGGTGTGATACA+AGG + Chr7:77396183-77396202 MsG0780040428.01.T01:intron 40.0%
!! GAGAACAAAAGAAGAGTGTC+TGG + Chr7:77396292-77396311 MsG0780040428.01.T01:intron 40.0%
!! TACTAAAGCATAGGAGCACT+TGG + Chr7:77397770-77397789 MsG0780040428.01.T01:three_prime_UTR 40.0%
AAGGACAGAGGAGAGAAGAA+GGG + Chr7:77396202-77396221 MsG0780040428.01.T01:intron 45.0%
AATTGCAGGCGTTCATGAGT+TGG + Chr7:77397383-77397402 MsG0780040428.01.T01:CDS 45.0%
ACAAATCCCCTCCAAGACTT+TGG + Chr7:77395616-77395635 MsG0780040428.01.T01:intron 45.0%
ACCATCAACCAAAGTCTTGG+AGG - Chr7:77395627-77395646 None:intergenic 45.0%
ATACGTCGTCGTTTGAGGAA+AGG - Chr7:77393879-77393898 None:intergenic 45.0%
ATGACAGTTATGAGCTTGGG+GGG + Chr7:77395942-77395961 MsG0780040428.01.T01:intron 45.0%
ATTGCCGCTGCTTGAATATG+TGG + Chr7:77397152-77397171 MsG0780040428.01.T01:intron 45.0%
CACAAGTCCATGCTCGATAA+AGG + Chr7:77396936-77396955 MsG0780040428.01.T01:intron 45.0%
CATCAACCAAAGTCTTGGAG+GGG - Chr7:77395625-77395644 None:intergenic 45.0%
CATGACAGTTATGAGCTTGG+GGG + Chr7:77395941-77395960 MsG0780040428.01.T01:intron 45.0%
CCATCAACCAAAGTCTTGGA+GGG - Chr7:77395626-77395645 None:intergenic 45.0%
CCATGACAGTTATGAGCTTG+GGG + Chr7:77395940-77395959 MsG0780040428.01.T01:intron 45.0%
CTACTAGTTATGGACGAGCT+TGG + Chr7:77397630-77397649 MsG0780040428.01.T01:three_prime_UTR 45.0%
CTCTGCATTTGGAAGTAGAC+TGG + Chr7:77395172-77395191 MsG0780040428.01.T01:intron 45.0%
CTGGAGTCTATCTCTGCATT+TGG + Chr7:77395161-77395180 MsG0780040428.01.T01:intron 45.0%
CTGGCCACGAAAGGTTTATA+AGG + Chr7:77394807-77394826 MsG0780040428.01.T01:CDS 45.0%
GAACTCGTATACCTGCTGAT+AGG + Chr7:77397069-77397088 MsG0780040428.01.T01:intron 45.0%
GATTCCCTATTGGATCGGTT+TGG + Chr7:77395510-77395529 MsG0780040428.01.T01:intron 45.0%
GGATCCTCATCTATAGACTC+AGG - Chr7:77397478-77397497 None:intergenic 45.0%
GGATTTGAACACCCCTACTT+GGG + Chr7:77395531-77395550 MsG0780040428.01.T01:intron 45.0%
GGGACCTGAAAATGTTCTGT+TGG + Chr7:77396313-77396332 MsG0780040428.01.T01:intron 45.0%
GGTATTAGGAGCAGCATCAA+TGG + Chr7:77397296-77397315 MsG0780040428.01.T01:intron 45.0%
TACCCACGGCGCTTAATATT+TGG + Chr7:77394541-77394560 MsG0780040428.01.T01:intron 45.0%
TAGTAACGTCGTCGTCTTCT+CGG + Chr7:77393997-77394016 MsG0780040428.01.T01:intron 45.0%
TCACATGTTTGGCCCAAGTA+GGG - Chr7:77395546-77395565 None:intergenic 45.0%
TCATGTGTCTACGTGGGAAT+TGG + Chr7:77396365-77396384 MsG0780040428.01.T01:intron 45.0%
TGGATTTGAACACCCCTACT+TGG + Chr7:77395530-77395549 MsG0780040428.01.T01:intron 45.0%
TTCACATGTTTGGCCCAAGT+AGG - Chr7:77395547-77395566 None:intergenic 45.0%
TTGATGCTGCTCCTAATACC+TGG - Chr7:77397296-77397315 None:intergenic 45.0%
! CTCCCTGGTGTCAATTTATG+TGG + Chr7:77394346-77394365 MsG0780040428.01.T01:intron 45.0%
! GCGTCTTCGTTTTACTGATG+AGG + Chr7:77394069-77394088 MsG0780040428.01.T01:CDS 45.0%
! TTGATGCAATAACTGGCCTG+AGG + Chr7:77396048-77396067 MsG0780040428.01.T01:CDS 45.0%
!! CCAAAGTTGTTTTACCGTGG+GGG - Chr7:77396433-77396452 None:intergenic 45.0%
!! GTTTTGGTCATGTGTCTACG+TGG + Chr7:77396358-77396377 MsG0780040428.01.T01:intron 45.0%
!!! CTTTTGGTTTCTGTTGCTGC+TGG + Chr7:77394151-77394170 MsG0780040428.01.T01:CDS 45.0%
!! AAATTAATAAAATTAAACAA+AGG + Chr7:77394564-77394583 MsG0780040428.01.T01:intron 5.0%
!! AATTAATAAAATTAAACAAA+GGG + Chr7:77394565-77394584 MsG0780040428.01.T01:intron 5.0%
!!! AAACATTATAAATATTTTTA+AGG - Chr7:77396900-77396919 None:intergenic 5.0%
!!! AACATTATAAATATTTTTAA+GGG - Chr7:77396899-77396918 None:intergenic 5.0%
!!! TTATTTTTTATTTTATTTGT+AGG + Chr7:77393964-77393983 MsG0780040428.01.T01:intron 5.0%
AAGGATGACGTCACTTCTCC+TGG + Chr7:77397351-77397370 MsG0780040428.01.T01:CDS 50.0%
AGGACAGAGGAGAGAAGAAG+GGG + Chr7:77396203-77396222 MsG0780040428.01.T01:intron 50.0%
ATGACGTCACTTCTCCTGGT+GGG + Chr7:77397355-77397374 MsG0780040428.01.T01:CDS 50.0%
ATGCAGAATCGGGTAGAGGT+AGG - Chr7:77396398-77396417 None:intergenic 50.0%
CAAGGACAGAGGAGAGAAGA+AGG + Chr7:77396201-77396220 MsG0780040428.01.T01:intron 50.0%
CACACAGACAGACACAGTGA+CGG - Chr7:77393635-77393654 None:intergenic 50.0%
CACATGTTTGGCCCAAGTAG+GGG - Chr7:77395545-77395564 None:intergenic 50.0%
CATCAATGGCCACCCAAAGT+GGG + Chr7:77397310-77397329 MsG0780040428.01.T01:CDS 50.0%
CCAACTGTAGCAGCTGTGTT+AGG - Chr7:77394839-77394858 None:intergenic 50.0%
CCCCAAGCTCATAACTGTCA+TGG - Chr7:77395943-77395962 None:intergenic 50.0%
CCCCCACGGTAAAACAACTT+TGG + Chr7:77396430-77396449 MsG0780040428.01.T01:intron 50.0%
CCCTCCAAGACTTTGGTTGA+TGG + Chr7:77395623-77395642 MsG0780040428.01.T01:intron 50.0%
CCTAACACAGCTGCTACAGT+TGG + Chr7:77394836-77394855 MsG0780040428.01.T01:CDS 50.0%
GAAGCCGAGTGTGTAGGAAT+CGG - Chr7:77393719-77393738 None:intergenic 50.0%
GATGCGAGAAGGGGATAAGA+CGG - Chr7:77393794-77393813 None:intergenic 50.0%
GCTGCCACATATTCAAGCAG+CGG - Chr7:77397159-77397178 None:intergenic 50.0%
GTCACTGTGTCTGTCTGTGT+GGG + Chr7:77393634-77393653 MsG0780040428.01.T01:five_prime_UTR 50.0%
GTGGTGTGATACAAGGACAG+AGG + Chr7:77396190-77396209 MsG0780040428.01.T01:intron 50.0%
TCCTACACACTCGGCTTCAT+CGG + Chr7:77393721-77393740 MsG0780040428.01.T01:CDS 50.0%
TCTACGTGGGAATTGGACTC+AGG + Chr7:77396372-77396391 MsG0780040428.01.T01:intron 50.0%
TGAGGTTGTTGCTGCAGTGA+AGG + Chr7:77394087-77394106 MsG0780040428.01.T01:CDS 50.0%
TGTGAATTGTGCAGTGGGAG+TGG + Chr7:77396480-77396499 MsG0780040428.01.T01:intron 50.0%
TTCTCAGGTTCGATTCTCCC+TGG + Chr7:77394331-77394350 MsG0780040428.01.T01:intron 50.0%
! GTTTTACCGTGGGGGTTTTC+AGG - Chr7:77396425-77396444 None:intergenic 50.0%
! TTGGAAAAAGCGGGTTTCCG+TGG + Chr7:77397402-77397421 MsG0780040428.01.T01:CDS 50.0%
!! ATGGCCGAAAGCATTGCCAA+AGG + Chr7:77393754-77393773 MsG0780040428.01.T01:CDS 50.0%
!! ATGGCGGTTTTGATGCGAGA+AGG - Chr7:77393805-77393824 None:intergenic 50.0%
!! TGGCGGTTTTGATGCGAGAA+GGG - Chr7:77393804-77393823 None:intergenic 50.0%
ACGTCATCCTTGAGCTGTCC+AGG - Chr7:77397342-77397361 None:intergenic 55.0%
CCTGCAATTGTTGTCCCACC+AGG - Chr7:77397372-77397391 None:intergenic 55.0%
CCTGGCTAATCAATCGGCCA+GGG - Chr7:77397724-77397743 None:intergenic 55.0%
CCTGGTGGGACAACAATTGC+AGG + Chr7:77397369-77397388 MsG0780040428.01.T01:CDS 55.0%
CGAGCATGGACTTGTGCACA+GGG - Chr7:77396932-77396951 None:intergenic 55.0%
CGTCACTGTGTCTGTCTGTG+TGG + Chr7:77393633-77393652 MsG0780040428.01.T01:five_prime_UTR 55.0%
CGTCATCCTTGAGCTGTCCA+GGG - Chr7:77397341-77397360 None:intergenic 55.0%
CTCTTGGCTGCGTTTAGCAG+CGG - Chr7:77397451-77397470 None:intergenic 55.0%
CTGGCTAATCAATCGGCCAG+GGG - Chr7:77397723-77397742 None:intergenic 55.0%
GATGACGTCACTTCTCCTGG+TGG + Chr7:77397354-77397373 MsG0780040428.01.T01:CDS 55.0%
GCATCAATGGCCACCCAAAG+TGG + Chr7:77397309-77397328 MsG0780040428.01.T01:CDS 55.0%
GGCGCCTTTGGCAATGCTTT+CGG - Chr7:77393761-77393780 None:intergenic 55.0%
TCGAGCATGGACTTGTGCAC+AGG - Chr7:77396933-77396952 None:intergenic 55.0%
TGGTGGGAGCTTCATGCACT+GGG + Chr7:77396870-77396889 MsG0780040428.01.T01:intron 55.0%
TTGGTGGGAGCTTCATGCAC+TGG + Chr7:77396869-77396888 MsG0780040428.01.T01:intron 55.0%
! ATAGAGGCTCTGGCTGATGG+AGG + Chr7:77396525-77396544 MsG0780040428.01.T01:CDS 55.0%
! CCTGGCCGATTGATTAGCCA+GGG + Chr7:77397722-77397741 MsG0780040428.01.T01:three_prime_UTR 55.0%
! GCAATAGAGGCTCTGGCTGA+TGG + Chr7:77396522-77396541 MsG0780040428.01.T01:CDS 55.0%
! TCCAGGGTGCTTCCCACTTT+GGG - Chr7:77397325-77397344 None:intergenic 55.0%
!! CTTCATCGGCGCCGGTAAAA+TGG + Chr7:77393735-77393754 MsG0780040428.01.T01:CDS 55.0%
!! GGCGGTTTTGATGCGAGAAG+GGG - Chr7:77393803-77393822 None:intergenic 55.0%
AAGGGGATAAGACGGCGGAG+CGG - Chr7:77393786-77393805 None:intergenic 60.0%
AGCGGGGTTAGAGTGGATGG+CGG - Chr7:77393821-77393840 None:intergenic 60.0%
CACAGCTGCTACAGTTGGCG+AGG + Chr7:77394841-77394860 MsG0780040428.01.T01:CDS 60.0%
CCCTGGCTAATCAATCGGCC+AGG - Chr7:77397725-77397744 None:intergenic 60.0%
CCGAGTGTGTAGGAATCGGC+GGG - Chr7:77393715-77393734 None:intergenic 60.0%
CGAGTGTGTAGGAATCGGCG+GGG - Chr7:77393714-77393733 None:intergenic 60.0%
CGTACCGCCTTCGAGTCCAT+CGG + Chr7:77393844-77393863 MsG0780040428.01.T01:CDS 60.0%
GCCGAGTGTGTAGGAATCGG+CGG - Chr7:77393716-77393735 None:intergenic 60.0%
GCCGATGAAGCCGAGTGTGT+AGG - Chr7:77393725-77393744 None:intergenic 60.0%
GCGAGAAGGGGATAAGACGG+CGG - Chr7:77393791-77393810 None:intergenic 60.0%
GCTGATGGAGGAGTAGCAGC+TGG + Chr7:77396537-77396556 MsG0780040428.01.T01:CDS 60.0%
GGAAAGGACAGTGACGCCGA+TGG - Chr7:77393863-77393882 None:intergenic 60.0%
GTGTAGGAATCGGCGGGGAT+CGG - Chr7:77393709-77393728 None:intergenic 60.0%
! AGGGTGCTTCCCACTTTGGG+TGG - Chr7:77397322-77397341 None:intergenic 60.0%
! AGTGACGCCGATGGACTCGA+AGG - Chr7:77393854-77393873 None:intergenic 60.0%
! CCCTGGCCGATTGATTAGCC+AGG + Chr7:77397721-77397740 MsG0780040428.01.T01:three_prime_UTR 60.0%
! CGATGGACTCGAAGGCGGTA+CGG - Chr7:77393846-77393865 None:intergenic 60.0%
! GAAGCACCCTGGACAGCTCA+AGG + Chr7:77397332-77397351 MsG0780040428.01.T01:CDS 60.0%
! GTCCAGGGTGCTTCCCACTT+TGG - Chr7:77397326-77397345 None:intergenic 60.0%
!! ACCCAAAGTGGGAAGCACCC+TGG + Chr7:77397321-77397340 MsG0780040428.01.T01:CDS 60.0%
!! AGGAATGGGCTGGCCACGAA+AGG + Chr7:77394798-77394817 MsG0780040428.01.T01:intron 60.0%
!! CCCGCCGATTCCTACACACT+CGG + Chr7:77393712-77393731 MsG0780040428.01.T01:CDS 60.0%
ACACTCGGCTTCATCGGCGC+CGG + Chr7:77393727-77393746 MsG0780040428.01.T01:CDS 65.0%
ACAGTTGGCGAGGCAGCGTC+AGG + Chr7:77394851-77394870 MsG0780040428.01.T01:CDS 65.0%
GCGAGCGGGGTTAGAGTGGA+TGG - Chr7:77393824-77393843 None:intergenic 65.0%
GGATAAGACGGCGGAGCGGA+CGG - Chr7:77393782-77393801 None:intergenic 65.0%
TACGGCGAGCGGGGTTAGAG+TGG - Chr7:77393828-77393847 None:intergenic 65.0%
! GACGCCGATGGACTCGAAGG+CGG - Chr7:77393851-77393870 None:intergenic 65.0%
CTCGAAGGCGGTACGGCGAG+CGG - Chr7:77393839-77393858 None:intergenic 70.0%
TCGAAGGCGGTACGGCGAGC+GGG - Chr7:77393838-77393857 None:intergenic 70.0%
CGAAGGCGGTACGGCGAGCG+GGG - Chr7:77393837-77393856 None:intergenic 75.0%
! GGCGGAGCGGACGGCGCCTT+TGG - Chr7:77393773-77393792 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 77393567 77398057 77393567 ID=MsG0780040428.01;Name=MsG0780040428.01
Chr7 mRNA 77393567 77398057 77393567 ID=MsG0780040428.01.T01;Parent=MsG0780040428.01;Name=MsG0780040428.01.T01;_AED=0.33;_eAED=0.36;_QI=127|0.6|0.66|1|1|1|6|578|284
Chr7 exon 77393567 77393894 77393567 ID=MsG0780040428.01.T01:exon:14854;Parent=MsG0780040428.01.T01
Chr7 exon 77394067 77394195 77394067 ID=MsG0780040428.01.T01:exon:14855;Parent=MsG0780040428.01.T01
Chr7 exon 77394800 77394872 77394800 ID=MsG0780040428.01.T01:exon:14856;Parent=MsG0780040428.01.T01
Chr7 exon 77395949 77396111 77395949 ID=MsG0780040428.01.T01:exon:14857;Parent=MsG0780040428.01.T01
Chr7 exon 77396494 77396599 77396494 ID=MsG0780040428.01.T01:exon:14858;Parent=MsG0780040428.01.T01
Chr7 exon 77397297 77398057 77397297 ID=MsG0780040428.01.T01:exon:14859;Parent=MsG0780040428.01.T01
Chr7 five_prime_UTR 77393567 77393693 77393567 ID=MsG0780040428.01.T01:five_prime_utr;Parent=MsG0780040428.01.T01
Chr7 CDS 77393694 77393894 77393694 ID=MsG0780040428.01.T01:cds;Parent=MsG0780040428.01.T01
Chr7 CDS 77394067 77394195 77394067 ID=MsG0780040428.01.T01:cds;Parent=MsG0780040428.01.T01
Chr7 CDS 77394800 77394872 77394800 ID=MsG0780040428.01.T01:cds;Parent=MsG0780040428.01.T01
Chr7 CDS 77395949 77396111 77395949 ID=MsG0780040428.01.T01:cds;Parent=MsG0780040428.01.T01
Chr7 CDS 77396494 77396599 77396494 ID=MsG0780040428.01.T01:cds;Parent=MsG0780040428.01.T01
Chr7 CDS 77397297 77397479 77397297 ID=MsG0780040428.01.T01:cds;Parent=MsG0780040428.01.T01
Chr7 three_prime_UTR 77397480 77398057 77397480 ID=MsG0780040428.01.T01:three_prime_utr;Parent=MsG0780040428.01.T01
Gene Sequence

>MsG0780040428.01.T01

ATGGAAATCATTCCGATCCCCGCCGATTCCTACACACTCGGCTTCATCGGCGCCGGTAAAATGGCCGAAAGCATTGCCAAAGGCGCCGTCCGCTCCGCCGTCTTATCCCCTTCTCGCATCAAAACCGCCATCCACTCTAACCCCGCTCGCCGTACCGCCTTCGAGTCCATCGGCGTCACTGTCCTTTCCTCAAACGACGACTTGCGTCTTCGTTTTACTGATGAGGTTGTTGCTGCAGTGAAGGATGTTGTTTTGAAATTGAAGCCGCTTCTTACTAAGGATAAGCTTTTGGTTTCTGTTGCTGCTGGAATCAAGATGAAAGATCTTCAGGAATGGGCTGGCCACGAAAGGTTTATAAGGGTAATGCCTAACACAGCTGCTACAGTTGGCGAGGCAGCGTCAGTTATGAGCTTGGGGGGAGCTGCAACAGTAGAAGATGCAAATCTTATATCCCAATTATTTGGGTCAATTGGCAAAATATGGAAAGCTGACGATAAGTATTTTGATGCAATAACTGGCCTGAGGTACGCAAATCTCATTTTGCAAAATGACAGCATAATATTTGGTGGGAGTGGTCCTGCTTATATTTATTTAGCAATAGAGGCTCTGGCTGATGGAGGAGTAGCAGCTGGTCTACCACGTGATCTTGCATTAAGTCTAGCTTCTCAGACTGTATTAGGAGCAGCATCAATGGCCACCCAAAGTGGGAAGCACCCTGGACAGCTCAAGGATGACGTCACTTCTCCTGGTGGGACAACAATTGCAGGCGTTCATGAGTTGGAAAAAGCGGGTTTCCGTGGAATACTGATGAATGCTGTTGTTGCCGCTGCTAAACGCAGCCAAGAGCTTTCCTGA
Protein sequence

>MsG0780040428.01.T01

MEIIPIPADSYTLGFIGAGKMAESIAKGAVRSAVLSPSRIKTAIHSNPARRTAFESIGVTVLSSNDDLRLRFTDEVVAAVKDVVLKLKPLLTKDKLLVSVAAGIKMKDLQEWAGHERFIRVMPNTAATVGEAASVMSLGGAATVEDANLISQLFGSIGKIWKADDKYFDAITGLRYANLILQNDSIIFGGSGPAYIYLAIEALADGGVAAGLPRDLALSLASQTVLGAASMATQSGKHPGQLKDDVTSPGGTTIAGVHELEKAGFRGILMNAVVAAAKRSQELS*