AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022895.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022895.01.T01 MTR_7g451450 35.176 398 236 9 57 447 83 465 2.36e-61 207
MsG0480022895.01.T01 MTR_7g072420 30.900 411 246 14 47 433 70 466 2.27e-47 171
MsG0480022895.01.T01 MTR_8g091660 28.427 496 287 17 7 452 4 481 6.50e-47 169
MsG0480022895.01.T01 MTR_3g465800 28.825 451 278 16 21 449 41 470 2.58e-44 162
MsG0480022895.01.T01 MTR_3g465800 30.075 399 244 14 72 449 15 399 1.48e-42 155
MsG0480022895.01.T01 MTR_4g076100 26.714 423 249 13 61 436 81 489 4.87e-36 140
MsG0480022895.01.T01 MTR_3g118070 30.671 313 192 8 61 361 19 318 2.36e-33 130
MsG0480022895.01.T01 MTR_3g118070 30.671 313 192 8 61 361 76 375 4.53e-33 131
MsG0480022895.01.T01 MTR_4g076100 27.515 338 189 11 141 436 22 345 1.64e-30 122
MsG0480022895.01.T01 MTR_4g128620 26.383 235 156 7 227 446 587 819 8.62e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022895.01.T01 AT5G46180 70.880 443 119 2 36 478 43 475 0.0 671
MsG0480022895.01.T01 AT1G80600 33.588 393 245 7 57 445 73 453 7.30e-62 209
MsG0480022895.01.T01 AT4G39660 29.812 426 256 14 52 452 69 476 6.88e-47 169
MsG0480022895.01.T01 AT2G38400 29.817 436 264 13 21 433 46 462 9.97e-46 166
MsG0480022895.01.T01 AT2G38400 29.587 436 265 13 21 433 46 462 1.12e-45 166
MsG0480022895.01.T01 AT4G39660 29.904 418 250 14 60 452 2 401 2.52e-45 163
MsG0480022895.01.T01 AT3G08860 28.319 452 273 15 21 446 49 475 2.83e-44 162
MsG0480022895.01.T01 AT3G08860 28.474 439 267 14 21 433 49 466 4.27e-44 161
MsG0480022895.01.T01 AT3G22200 28.947 418 247 14 61 436 70 479 5.37e-37 142
MsG0480022895.01.T01 AT3G22200 28.947 418 247 14 61 436 79 488 8.10e-37 142
MsG0480022895.01.T01 AT5G63570 29.814 322 200 9 61 369 19 327 3.91e-31 124
MsG0480022895.01.T01 AT5G63570 29.814 322 200 9 61 369 82 390 8.05e-31 124
MsG0480022895.01.T01 AT3G48730 29.193 322 202 9 61 369 80 388 1.74e-28 118

Find 127 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGCATAGCTGCATTTATTT+TGG 0.157532 4:+78199321 MsG0480022895.01.T01:CDS
GGCCATCTTAAAGTTGATTT+TGG 0.199551 4:+78199148 MsG0480022895.01.T01:CDS
TTAAGATGGCCTGGCATTAA+AGG 0.213274 4:-78199136 None:intergenic
GCTGGAGGAGCAGCATCTTT+TGG 0.213355 4:-78203000 None:intergenic
AATCATCAACACGTTATATT+TGG 0.227981 4:-78200556 None:intergenic
TTTCTACAATGATCGCTTTC+CGG 0.238262 4:+78198657 MsG0480022895.01.T01:CDS
TAGACCAGGCATTCATTATC+TGG 0.272689 4:-78203069 None:intergenic
TTAATTTCATAAATATGATA+TGG 0.296649 4:-78203181 None:intergenic
GAAAGTTTGTCCCCTGTATC+AGG 0.309360 4:+78202368 MsG0480022895.01.T01:CDS
AATGAAGCTACCCGTGGTTT+TGG 0.314723 4:+78199112 MsG0480022895.01.T01:CDS
ATTCTTTGTCAATGATTGTT+TGG 0.317700 4:-78197773 None:intergenic
CGCACCTCCTTCACATGGTC+CGG 0.342009 4:-78202308 None:intergenic
CGAGAAGCTCACCTCCCATT+TGG 0.348974 4:-78202256 None:intergenic
CTTAATTCAAAGCCTGATAC+AGG 0.361779 4:-78202380 None:intergenic
TCTGCAAGAACTGCGCTAAC+TGG 0.362917 4:-78201401 None:intergenic
TACAGAGGAACCAGAACTTT+TGG 0.363782 4:+78197717 MsG0480022895.01.T01:CDS
TCATGTTGTGGCTGCTTCAA+TGG 0.367473 4:+78199055 MsG0480022895.01.T01:CDS
CATAGTTATACCTCATTGTT+GGG 0.368104 4:-78198805 None:intergenic
TTCTTTGTCAATGATTGTTT+GGG 0.376263 4:-78197772 None:intergenic
AGCCTTGTTTGGTTATGATA+TGG 0.380865 4:+78198699 MsG0480022895.01.T01:CDS
TGGCTACTCTGCAGTTAATC+AGG 0.391203 4:+78198213 MsG0480022895.01.T01:CDS
TGTGGCAACACCAAAAGTTC+TGG 0.395603 4:-78197727 None:intergenic
GAACCTATCCAAGGGGAAGC+TGG 0.400196 4:+78199343 MsG0480022895.01.T01:CDS
TCATAGTTATACCTCATTGT+TGG 0.402470 4:-78198806 None:intergenic
TCAATATATTTGTTTCCCTC+TGG 0.406966 4:-78198181 None:intergenic
CGAGGGCCTTAGAACCTTGT+TGG 0.409141 4:-78202933 None:intergenic
TGAGATCCAACAAGGTTCTA+AGG 0.410990 4:+78202927 MsG0480022895.01.T01:CDS
ACAGCTTTCAAATAACCATC+TGG 0.413613 4:-78200519 None:intergenic
GAGAAGCTCACCTCCCATTT+GGG 0.418819 4:-78202255 None:intergenic
TGCTTCAATGGTCGTACATT+GGG 0.424592 4:+78199067 MsG0480022895.01.T01:CDS
AAAGATGCTGCTCCTCCAGC+TGG 0.425140 4:+78203003 MsG0480022895.01.T01:CDS
TCAGATACTAGGGAAAGCTT+TGG 0.426949 4:+78201364 MsG0480022895.01.T01:intron
GAGTATTTGACAGCCTTGTT+TGG 0.427807 4:+78198688 MsG0480022895.01.T01:CDS
TCTTAAAGCTTTAAAAGATC+AGG 0.428054 4:+78198606 MsG0480022895.01.T01:CDS
TTTGCATGAGCAAATACAAT+AGG 0.428807 4:-78198139 None:intergenic
CAGATACTAGGGAAAGCTTT+GGG 0.440625 4:+78201365 MsG0480022895.01.T01:intron
TGAACACCAACCACTACATC+TGG 0.440669 4:-78200648 None:intergenic
CCTTCAGCACCAGTATTCAT+AGG 0.441808 4:-78198727 None:intergenic
GTGAAGGAGGTGCGGGGAAG+AGG 0.443048 4:+78202317 MsG0480022895.01.T01:CDS
TAAGGCCCTCGCTGATGTGC+TGG 0.445290 4:+78202945 MsG0480022895.01.T01:CDS
CGTTGTGGTCGAGTCGTGTA+TGG 0.450567 4:+78203042 MsG0480022895.01.T01:CDS
ATTGCTGATGAAATACAAAC+TGG 0.456192 4:+78200576 MsG0480022895.01.T01:CDS
CGGGGAAGAGGACTGTTCAT+TGG 0.461273 4:+78202329 MsG0480022895.01.T01:CDS
AACCTATCCAAGGGGAAGCT+GGG 0.467176 4:+78199344 MsG0480022895.01.T01:CDS
ATTGTATTTGCTCATGCAAA+GGG 0.473811 4:+78198142 MsG0480022895.01.T01:CDS
GGACCATGTGAAGGAGGTGC+GGG 0.476342 4:+78202310 MsG0480022895.01.T01:CDS
CAAACTGGATTAGCAAGAAC+AGG 0.479961 4:+78200591 MsG0480022895.01.T01:CDS
ATTGGACAGATCTACCCAAA+TGG 0.483780 4:+78202241 MsG0480022895.01.T01:intron
CTAGGGAAAGCTTTGGGTGG+AGG 0.491794 4:+78201371 MsG0480022895.01.T01:CDS
TTAAACCTTCCATGCTGTCC+AGG 0.491922 4:-78201449 None:intergenic
CTTTAAAAGATCAGGCAGAC+AGG 0.501503 4:+78198614 MsG0480022895.01.T01:CDS
CAAATGGGAGGTGAGCTTCT+CGG 0.504493 4:+78202257 MsG0480022895.01.T01:CDS
AACATACCCCAGCTTCCCCT+TGG 0.504988 4:-78199351 None:intergenic
CGTTGAAGTTAGCAAGAAAG+TGG 0.505236 4:+78198761 MsG0480022895.01.T01:CDS
CCACAACGATCACATGCACT+AGG 0.505325 4:-78203027 None:intergenic
CTGCTTCAATGGTCGTACAT+TGG 0.506187 4:+78199066 MsG0480022895.01.T01:CDS
TTGGGAAGATGAAGAAGCGT+TGG 0.508848 4:-78197754 None:intergenic
TTTCTTACCTTATGCACAGT+GGG 0.509433 4:-78202469 None:intergenic
ATGGCAACTGCACTGGCCAA+TGG 0.511220 4:-78201967 None:intergenic
TGAGGCAATGGCAACTGCAC+TGG 0.516585 4:-78201974 None:intergenic
CACCAAAATCAACTTTAAGA+TGG 0.516646 4:-78199150 None:intergenic
TATTGTATTTGCTCATGCAA+AGG 0.517613 4:+78198141 MsG0480022895.01.T01:CDS
GCTCTTATTGTCTCATGTTG+TGG 0.519417 4:+78199043 MsG0480022895.01.T01:CDS
AAATCAACTTTAAGATGGCC+TGG 0.519591 4:-78199145 None:intergenic
TCACATGCACTAGGGCCAGC+TGG 0.522239 4:-78203018 None:intergenic
CAGCTTTCAAATAACCATCT+GGG 0.525779 4:-78200518 None:intergenic
TTGGACAGATCTACCCAAAT+GGG 0.526655 4:+78202242 MsG0480022895.01.T01:intron
TGAGCAAATACAATAGGAAG+TGG 0.526855 4:-78198133 None:intergenic
ATGGTACTTCCTATGAATAC+TGG 0.531481 4:+78198718 MsG0480022895.01.T01:CDS
GCACCTCCTTCACATGGTCC+GGG 0.537138 4:-78202307 None:intergenic
TGCAAAGGGATCAGCTGTGT+GGG 0.540779 4:+78198156 MsG0480022895.01.T01:CDS
TTCTTTGATCACTTCAAGTG+AGG 0.543995 4:-78201992 None:intergenic
TTAACCAGATAATGAATGCC+TGG 0.546110 4:+78203065 MsG0480022895.01.T01:exon
TGGGAAGATGAAGAAGCGTT+GGG 0.548907 4:-78197753 None:intergenic
AGGGAAAGATATATACTTGT+GGG 0.551338 4:-78197808 None:intergenic
GATCACTTCAAGTGAGGCAA+TGG 0.551674 4:-78201986 None:intergenic
AATTGTGTCATGTGTTGACT+TGG 0.561328 4:-78202432 None:intergenic
TTCCCCGCACCTCCTTCACA+TGG 0.564937 4:-78202313 None:intergenic
ATCAGCTGTGTGGGATCCAG+AGG 0.565766 4:+78198165 MsG0480022895.01.T01:CDS
TGTATAAAACCTGGACAGCA+TGG 0.573539 4:+78201440 MsG0480022895.01.T01:CDS
CAAATACAATAGGAAGTGGA+TGG 0.580722 4:-78198129 None:intergenic
GTCAAATACTCAGCAAACAC+CGG 0.582762 4:-78198676 None:intergenic
GAATACTGGTGCTGAAGGTG+TGG 0.583184 4:+78198732 MsG0480022895.01.T01:CDS
TAAAACCTGGACAGCATGGA+AGG 0.583742 4:+78201444 MsG0480022895.01.T01:CDS
ACCCCAGCTTCCCCTTGGAT+AGG 0.586113 4:-78199346 None:intergenic
AAGGGAAAGATATATACTTG+TGG 0.586787 4:-78197809 None:intergenic
ACCTATCCAAGGGGAAGCTG+GGG 0.586910 4:+78199345 MsG0480022895.01.T01:CDS
ACTGGGAATAAGTGATCTCA+AGG 0.588655 4:-78203219 None:intergenic
AGCTTTCAAATAACCATCTG+GGG 0.599511 4:-78200517 None:intergenic
GTGATGCTTTGTATAAAACC+TGG 0.600068 4:+78201431 MsG0480022895.01.T01:CDS
CGGACCATGTGAAGGAGGTG+CGG 0.603381 4:+78202309 MsG0480022895.01.T01:CDS
TAATTCAAAGCCTGATACAG+GGG 0.605478 4:-78202378 None:intergenic
GTTGAAGTTAGCAAGAAAGT+GGG 0.607885 4:+78198762 MsG0480022895.01.T01:CDS
TTAATTCAAAGCCTGATACA+GGG 0.608427 4:-78202379 None:intergenic
AGAAGTTCGTCCAGATGTAG+TGG 0.615199 4:+78200638 MsG0480022895.01.T01:CDS
TGAAGAAGCGTTGGGTTGTG+TGG 0.618995 4:-78197745 None:intergenic
GAACAGAACAGAAGAAAACA+AGG 0.621501 4:-78197828 None:intergenic
CACAACGATCACATGCACTA+GGG 0.624398 4:-78203026 None:intergenic
AATTTCCAGCACATCAGCGA+GGG 0.626318 4:-78202950 None:intergenic
GACCATGTGAAGGAGGTGCG+GGG 0.627725 4:+78202311 MsG0480022895.01.T01:CDS
GCATTAAAGGACCAAAACCA+CGG 0.628989 4:-78199123 None:intergenic
TACCATATCATAACCAAACA+AGG 0.631313 4:-78198701 None:intergenic
ATGCAAAGGGATCAGCTGTG+TGG 0.641631 4:+78198155 MsG0480022895.01.T01:CDS
ACAATACCCGGACCATGTGA+AGG 0.644513 4:+78202301 MsG0480022895.01.T01:CDS
GCTTTCAAATAACCATCTGG+GGG 0.649011 4:-78200516 None:intergenic
TCTTACCTTATGCACAGTGG+GGG 0.652538 4:-78202467 None:intergenic
CTTTCTTACCTTATGCACAG+TGG 0.652810 4:-78202470 None:intergenic
CATTAAAGGACCAAAACCAC+GGG 0.654497 4:-78199122 None:intergenic
CCTATGAATACTGGTGCTGA+AGG 0.655355 4:+78198727 MsG0480022895.01.T01:CDS
AACAGAACAGAAGAAAACAA+GGG 0.659582 4:-78197827 None:intergenic
TTCTTACCTTATGCACAGTG+GGG 0.660148 4:-78202468 None:intergenic
GAAGATTCAGAAACAATACC+CGG 0.661569 4:+78202289 MsG0480022895.01.T01:CDS
GACAGATCTACCCAAATGGG+AGG 0.666226 4:+78202245 MsG0480022895.01.T01:intron
ATACTAGGGAAAGCTTTGGG+TGG 0.669588 4:+78201368 MsG0480022895.01.T01:CDS
CCAAAATAAATGCAGCTATG+CGG 0.671952 4:-78199321 None:intergenic
AGATCAGGCAGACAGGCTGA+CGG 0.672284 4:+78198621 MsG0480022895.01.T01:CDS
CATGCACTAGGGCCAGCTGG+AGG 0.674851 4:-78203015 None:intergenic
ATACCCGGACCATGTGAAGG+AGG 0.676758 4:+78202304 MsG0480022895.01.T01:CDS
TCAGCTGTGTGGGATCCAGA+GGG 0.679081 4:+78198166 MsG0480022895.01.T01:CDS
AAGAAGAGAGACTTGCTGAG+AGG 0.679464 4:+78202010 MsG0480022895.01.T01:CDS
TGTGACAATGAAGCTACCCG+TGG 0.679963 4:+78199106 MsG0480022895.01.T01:CDS
CCTAGTGCATGTGATCGTTG+TGG 0.687700 4:+78203027 MsG0480022895.01.T01:CDS
TTGAAGTTAGCAAGAAAGTG+GGG 0.692526 4:+78198763 MsG0480022895.01.T01:CDS
AGTGCGGATGAGATCCAACA+AGG 0.696962 4:+78202919 MsG0480022895.01.T01:intron
CTTTCAAATAACCATCTGGG+GGG 0.711042 4:-78200515 None:intergenic
CAATTTCCAGCACATCAGCG+AGG 0.712817 4:-78202951 None:intergenic
CTTTCTTGCTAACTTCAACG+CGG 0.721978 4:-78198758 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTAATGTTATGAAAAA+TGG + Chr4:78200346-78200365 MsG0480022895.01.T01:intron 10.0%
!! AATTAATTGTTTATTAAAGA+AGG + Chr4:78201879-78201898 MsG0480022895.01.T01:intron 10.0%
!! ATATTAATGTTATGAAAAAT+GGG + Chr4:78200347-78200366 MsG0480022895.01.T01:intron 10.0%
!! TTAATTTCATAAATATGATA+TGG - Chr4:78203184-78203203 None:intergenic 10.0%
!! TTGAATAAATTTATTTCATT+AGG + Chr4:78202076-78202095 MsG0480022895.01.T01:intron 10.0%
!!! AAATATATTGATTTTTTATC+TGG + Chr4:78198193-78198212 MsG0480022895.01.T01:CDS 10.0%
!!! ATTTTAATGAATGAAATTAT+CGG - Chr4:78201857-78201876 None:intergenic 10.0%
!!! TTTATTAGTTTAATATATGA+AGG - Chr4:78197917-78197936 None:intergenic 10.0%
!!! TTTTTTATTCCTTAATTTTT+GGG + Chr4:78198508-78198527 MsG0480022895.01.T01:intron 10.0%
!! AAAAATAAATAACCATTACA+AGG - Chr4:78201758-78201777 None:intergenic 15.0%
!! AAACTATTATACTTCATAAA+TGG - Chr4:78200182-78200201 None:intergenic 15.0%
!! AATAAAAAAAATCAGTTTGA+CGG - Chr4:78200318-78200337 None:intergenic 15.0%
!! ATAAGAATAGAAAATAGAAT+CGG - Chr4:78199688-78199707 None:intergenic 15.0%
!! ATGATGAATAAATATAAATG+AGG - Chr4:78202578-78202597 None:intergenic 15.0%
!! CAAAAATTAAGGAATAAAAA+AGG - Chr4:78198509-78198528 None:intergenic 15.0%
!! TACAGAATAAAAAAGAAAAA+GGG - Chr4:78201284-78201303 None:intergenic 15.0%
!! TCTGAACTTAAATTATTAAA+AGG - Chr4:78200793-78200812 None:intergenic 15.0%
!! TTACAGAATAAAAAAGAAAA+AGG - Chr4:78201285-78201304 None:intergenic 15.0%
!!! CTTTTTTATTCCTTAATTTT+TGG + Chr4:78198507-78198526 MsG0480022895.01.T01:intron 15.0%
!!! TTTAAAGCTTTAAGAATTTT+AGG - Chr4:78198601-78198620 None:intergenic 15.0%
!!! TTTTAATAATTTAAGTTCAG+AGG + Chr4:78200792-78200811 MsG0480022895.01.T01:intron 15.0%
!!! TTTTCTTATATTATTATCAC+CGG + Chr4:78198328-78198347 MsG0480022895.01.T01:intron 15.0%
!! AAGAAAGTTAAAGAAATTAG+TGG - Chr4:78201339-78201358 None:intergenic 20.0%
!! AAGAAATTAGTGGTATAAAA+AGG - Chr4:78201329-78201348 None:intergenic 20.0%
!! AATAAATATAAATGAGGCAA+TGG - Chr4:78202572-78202591 None:intergenic 20.0%
!! AATAGAAAATAGAATCAGTT+AGG - Chr4:78199683-78199702 None:intergenic 20.0%
!! AATTATTGAAATTGAAAGCT+AGG + Chr4:78202666-78202685 MsG0480022895.01.T01:intron 20.0%
!! AGGAAAAACTAGATATAATA+TGG - Chr4:78201076-78201095 None:intergenic 20.0%
!! ATAGAAAATAGAATCAGTTA+GGG - Chr4:78199682-78199701 None:intergenic 20.0%
!! ATCAAGATATTACAACTATT+AGG - Chr4:78198843-78198862 None:intergenic 20.0%
!! ATTCTGTTATTATGAAATGT+TGG + Chr4:78199943-78199962 MsG0480022895.01.T01:intron 20.0%
!! CATACATAATATTACATTCT+CGG - Chr4:78200209-78200228 None:intergenic 20.0%
!! TAAAAAAAAATCCATCCTAT+GGG + Chr4:78201777-78201796 MsG0480022895.01.T01:intron 20.0%
!! TAACGTCATATAAAAAAATG+TGG - Chr4:78200474-78200493 None:intergenic 20.0%
!! TATAGTGAAAAATGAAAACA+AGG - Chr4:78202641-78202660 None:intergenic 20.0%
!! TCTCATTTAAAAAATCCAAA+TGG - Chr4:78198967-78198986 None:intergenic 20.0%
!! TGAAAAGTAACAGAAAAAAA+AGG - Chr4:78201928-78201947 None:intergenic 20.0%
!! TGAAATTAAAAAATGTCACT+AGG + Chr4:78203195-78203214 MsG0480022895.01.T01:three_prime_UTR 20.0%
!! TGAATTAAGTGAAAAATTGA+AGG + Chr4:78202394-78202413 MsG0480022895.01.T01:CDS 20.0%
!! TTAAAAAAAAATCCATCCTA+TGG + Chr4:78201776-78201795 MsG0480022895.01.T01:intron 20.0%
!! TTAATCAGGTATAAATTGAA+CGG + Chr4:78198227-78198246 MsG0480022895.01.T01:intron 20.0%
!!! AAGCATTATTTCTTTTATCT+AGG - Chr4:78202790-78202809 None:intergenic 20.0%
!!! ACTTATATTTTACTTTTGCT+TGG + Chr4:78203105-78203124 MsG0480022895.01.T01:three_prime_UTR 20.0%
!!! ATGACGTTATATTTTTTTAC+AGG + Chr4:78200485-78200504 MsG0480022895.01.T01:intron 20.0%
!!! TGGATTTTTTAAATGAGATT+CGG + Chr4:78198969-78198988 MsG0480022895.01.T01:intron 20.0%
!!! TTTTATAAAATTCATAGACC+AGG - Chr4:78203086-78203105 None:intergenic 20.0%
! AAAACAGAGAATATTATGGT+TGG + Chr4:78200978-78200997 MsG0480022895.01.T01:intron 25.0%
! AAAGATTTGATTACTGTGAA+TGG + Chr4:78202754-78202773 MsG0480022895.01.T01:intron 25.0%
! AAATCCTAGACCAAAATATT+AGG - Chr4:78202879-78202898 None:intergenic 25.0%
! AACTTAAGACATTGCTTAAA+TGG - Chr4:78202505-78202524 None:intergenic 25.0%
! AATCATCAACACGTTATATT+TGG - Chr4:78200559-78200578 None:intergenic 25.0%
! AATCCTAGACCAAAATATTA+GGG - Chr4:78202878-78202897 None:intergenic 25.0%
! ACAAGAAAACAATAAACGAA+TGG - Chr4:78201499-78201518 None:intergenic 25.0%
! ACAGAATATATAAGAGGTAA+AGG - Chr4:78200674-78200693 None:intergenic 25.0%
! AGAGATACAGAATATATAAG+AGG - Chr4:78200680-78200699 None:intergenic 25.0%
! ATAGAAAATAGAATCGGTAA+AGG - Chr4:78200055-78200074 None:intergenic 25.0%
! ATCTCAGAAATTGCTTATAT+AGG + Chr4:78199978-78199997 MsG0480022895.01.T01:intron 25.0%
! ATTCTGTTATTGTGAAATGA+TGG + Chr4:78199570-78199589 MsG0480022895.01.T01:intron 25.0%
! ATTCTTTGTCAATGATTGTT+TGG - Chr4:78197776-78197795 None:intergenic 25.0%
! GATAAAAGAAATAATGCTTC+TGG + Chr4:78202791-78202810 MsG0480022895.01.T01:intron 25.0%
! GTGAAAAAACAAACATAAGT+TGG - Chr4:78201228-78201247 None:intergenic 25.0%
! TCTCAGAAATTGCTTATATA+GGG + Chr4:78199979-78199998 MsG0480022895.01.T01:intron 25.0%
! TGGTAAAACAGAGAATATTA+TGG + Chr4:78200974-78200993 MsG0480022895.01.T01:intron 25.0%
! TTCACAAAAAGAGAAACTTA+TGG + Chr4:78201243-78201262 MsG0480022895.01.T01:intron 25.0%
! TTCATAAGCATAACTAGATT+AGG - Chr4:78202704-78202723 None:intergenic 25.0%
! TTCTTTGTCAATGATTGTTT+GGG - Chr4:78197775-78197794 None:intergenic 25.0%
!! AAAAACAAACATAAGTTGGA+TGG - Chr4:78201224-78201243 None:intergenic 25.0%
!! ATCTAAGATATTGCTTATAG+AGG + Chr4:78199605-78199624 MsG0480022895.01.T01:intron 25.0%
!! TCTAAGATATTGCTTATAGA+GGG + Chr4:78199606-78199625 MsG0480022895.01.T01:intron 25.0%
!! TGTAAATGTCCCTAATATTT+TGG + Chr4:78202866-78202885 MsG0480022895.01.T01:intron 25.0%
!!! AAAGACACCATTTTTATTTC+TGG + Chr4:78197854-78197873 MsG0480022895.01.T01:intron 25.0%
!!! AAGACACCATTTTTATTTCT+GGG + Chr4:78197855-78197874 MsG0480022895.01.T01:intron 25.0%
!!! AATGTACCGTTTTTGAATTT+CGG + Chr4:78200131-78200150 MsG0480022895.01.T01:intron 25.0%
!!! ATTTTACTTTTGCTTGGAAA+AGG + Chr4:78203111-78203130 MsG0480022895.01.T01:three_prime_UTR 25.0%
!!! CTTTTTTTAATCACTCCATT+GGG + Chr4:78197944-78197963 MsG0480022895.01.T01:intron 25.0%
!!! GTCACTTGTTTTATCTTAAA+TGG + Chr4:78199481-78199500 MsG0480022895.01.T01:intron 25.0%
!!! GTTAGTCTTATATATTGATC+TGG + Chr4:78202144-78202163 MsG0480022895.01.T01:intron 25.0%
!!! TCTTAAAGCTTTAAAAGATC+AGG + Chr4:78198606-78198625 MsG0480022895.01.T01:CDS 25.0%
!!! TCTTTTTTTAATCACTCCAT+TGG + Chr4:78197943-78197962 MsG0480022895.01.T01:intron 25.0%
!!! TTCTTTTGATTCAGATACTA+GGG + Chr4:78201354-78201373 MsG0480022895.01.T01:intron 25.0%
!!! TTGCATTTTTCAAAATTGTC+CGG + Chr4:78198866-78198885 MsG0480022895.01.T01:intron 25.0%
!!! TTTCTTTTGATTCAGATACT+AGG + Chr4:78201353-78201372 MsG0480022895.01.T01:intron 25.0%
!!! TTTTTTGTAGCTATACCATT+TGG + Chr4:78198949-78198968 MsG0480022895.01.T01:intron 25.0%
AACAGAACAGAAGAAAACAA+GGG - Chr4:78197830-78197849 None:intergenic 30.0%
AAGAAATCAATGCAAAAGTG+AGG - Chr4:78201821-78201840 None:intergenic 30.0%
AAGCAAATATTTAGCATCAC+CGG - Chr4:78198888-78198907 None:intergenic 30.0%
AAGGGAAAGATATATACTTG+TGG - Chr4:78197812-78197831 None:intergenic 30.0%
AGGGAAAGATATATACTTGT+GGG - Chr4:78197811-78197830 None:intergenic 30.0%
AGTGAAAAATTGAAGGATAG+AGG + Chr4:78202401-78202420 MsG0480022895.01.T01:CDS 30.0%
ATGTTTATAGCGAAGTACAA+GGG - Chr4:78200711-78200730 None:intergenic 30.0%
ATTGCTGATGAAATACAAAC+TGG + Chr4:78200576-78200595 MsG0480022895.01.T01:CDS 30.0%
ATTGTATTTGCTCATGCAAA+GGG + Chr4:78198142-78198161 MsG0480022895.01.T01:CDS 30.0%
ATTTGATTACTGTGAATGGT+AGG + Chr4:78202758-78202777 MsG0480022895.01.T01:intron 30.0%
CAATAGTTGTCAAACATAGA+AGG + Chr4:78201519-78201538 MsG0480022895.01.T01:intron 30.0%
CAATGGTGAAAGTTACAAAT+AGG - Chr4:78202555-78202574 None:intergenic 30.0%
CAGATATATAAGAGATATGC+TGG - Chr4:78200093-78200112 None:intergenic 30.0%
CATAGTTATACCTCATTGTT+GGG - Chr4:78198808-78198827 None:intergenic 30.0%
CATCATACAAAGGAACATAT+TGG - Chr4:78199423-78199442 None:intergenic 30.0%
CTTGCAAAGACTAAATCATA+TGG - Chr4:78199827-78199846 None:intergenic 30.0%
GAAAAAAATTCCCAACAATG+AGG + Chr4:78198795-78198814 MsG0480022895.01.T01:CDS 30.0%
GAATCGTATGATATGGTTAA+AGG - Chr4:78200925-78200944 None:intergenic 30.0%
GTAACACCGAAATTCAAAAA+CGG - Chr4:78200140-78200159 None:intergenic 30.0%
GTCTTGATTTAACCTTGTAA+TGG + Chr4:78201743-78201762 MsG0480022895.01.T01:intron 30.0%
GTTAAATCAAGACATGCAAA+CGG - Chr4:78201736-78201755 None:intergenic 30.0%
TACCATATCATAACCAAACA+AGG - Chr4:78198704-78198723 None:intergenic 30.0%
TAGCATTAGTAAACAGGATT+TGG - Chr4:78198478-78198497 None:intergenic 30.0%
TATTGTATTTGCTCATGCAA+AGG + Chr4:78198141-78198160 MsG0480022895.01.T01:CDS 30.0%
TCAATATATTTGTTTCCCTC+TGG - Chr4:78198184-78198203 None:intergenic 30.0%
TCAGCAAAAGTAAATTGACA+CGG - Chr4:78199007-78199026 None:intergenic 30.0%
TCATAGTTATACCTCATTGT+TGG - Chr4:78198809-78198828 None:intergenic 30.0%
TGATATGGTTAAAGGAAGTA+AGG - Chr4:78200917-78200936 None:intergenic 30.0%
TGTGGAAAAGATGATATGTT+TGG - Chr4:78200456-78200475 None:intergenic 30.0%
TTAATTCAAAGCCTGATACA+GGG - Chr4:78202382-78202401 None:intergenic 30.0%
TTTCTATTTCCTTTGTGAAC+TGG + Chr4:78198437-78198456 MsG0480022895.01.T01:intron 30.0%
TTTGCATGAGCAAATACAAT+AGG - Chr4:78198142-78198161 None:intergenic 30.0%
! ATGATTTAGTCTTTGCAAGA+AGG + Chr4:78199828-78199847 MsG0480022895.01.T01:intron 30.0%
! CACCAAAATCAACTTTAAGA+TGG - Chr4:78199153-78199172 None:intergenic 30.0%
! CTTGTACTTTTGTGTTTTAC+TGG + Chr4:78200954-78200973 MsG0480022895.01.T01:intron 30.0%
! TATTCTGTAACCTTTTTCTG+AGG + Chr4:78201295-78201314 MsG0480022895.01.T01:intron 30.0%
! TCGTCTTTTCCCAAAAATTA+AGG - Chr4:78198520-78198539 None:intergenic 30.0%
!! AAAGGAAGTAAGGTATCTTT+TGG - Chr4:78200907-78200926 None:intergenic 30.0%
!! TATGAAGGTTGATTAGCTTA+AGG - Chr4:78197902-78197921 None:intergenic 30.0%
!! TGTCAATTTACTTTTGCTGA+TGG + Chr4:78199007-78199026 MsG0480022895.01.T01:intron 30.0%
!!! AGTGTATGTCATTTTTCTTC+AGG + Chr4:78198564-78198583 MsG0480022895.01.T01:intron 30.0%
!!! ATAGAGTTACTTTTTTCCTG+AGG + Chr4:78199785-78199804 MsG0480022895.01.T01:intron 30.0%
!!! GTGTATGTCATTTTTCTTCA+GGG + Chr4:78198565-78198584 MsG0480022895.01.T01:intron 30.0%
!!! GTTACTTTTCACAGTACTTT+TGG + Chr4:78201937-78201956 MsG0480022895.01.T01:intron 30.0%
!!! TTATTTTGGAACCTATCCAA+GGG + Chr4:78199335-78199354 MsG0480022895.01.T01:CDS 30.0%
!!! TTTATTTTGGAACCTATCCA+AGG + Chr4:78199334-78199353 MsG0480022895.01.T01:CDS 30.0%
AAACCATCTTCATTCATCTG+AGG - Chr4:78198408-78198427 None:intergenic 35.0%
AACCATCTTCATTCATCTGA+GGG - Chr4:78198407-78198426 None:intergenic 35.0%
AAGCAGTAGCATTAGTAAAC+AGG - Chr4:78198484-78198503 None:intergenic 35.0%
AAGTAACCTAATCCTTTGAG+AGG - Chr4:78202840-78202859 None:intergenic 35.0%
ACAGCTTTCAAATAACCATC+TGG - Chr4:78200522-78200541 None:intergenic 35.0%
AGCTTTCAAATAACCATCTG+GGG - Chr4:78200520-78200539 None:intergenic 35.0%
AGTTTCTGATGCATATTCAC+AGG - Chr4:78201105-78201124 None:intergenic 35.0%
ATGGTACTTCCTATGAATAC+TGG + Chr4:78198718-78198737 MsG0480022895.01.T01:CDS 35.0%
ATTAGATCATGAACGAAAGC+CGG - Chr4:78200272-78200291 None:intergenic 35.0%
CAAAAACGGTACATTTCACA+TGG - Chr4:78200126-78200145 None:intergenic 35.0%
CAAATACAATAGGAAGTGGA+TGG - Chr4:78198132-78198151 None:intergenic 35.0%
CAATAAACTCCAGTTCACAA+AGG - Chr4:78198449-78198468 None:intergenic 35.0%
CAGCTTTCAAATAACCATCT+GGG - Chr4:78200521-78200540 None:intergenic 35.0%
CCAAAATAAATGCAGCTATG+CGG - Chr4:78199324-78199343 None:intergenic 35.0%
CTAGGTAGATGCATTTAACT+AGG + Chr4:78201179-78201198 MsG0480022895.01.T01:intron 35.0%
CTTAATTCAAAGCCTGATAC+AGG - Chr4:78202383-78202402 None:intergenic 35.0%
GAACAGAACAGAAGAAAACA+AGG - Chr4:78197831-78197850 None:intergenic 35.0%
GAAGATTCAGAAACAATACC+CGG + Chr4:78202289-78202308 MsG0480022895.01.T01:CDS 35.0%
GAGAGACCCAGAAATAAAAA+TGG - Chr4:78197864-78197883 None:intergenic 35.0%
GATGTTTATAGCGAAGTACA+AGG - Chr4:78200712-78200731 None:intergenic 35.0%
GGAAACTAAACCTCAGAAAA+AGG - Chr4:78201308-78201327 None:intergenic 35.0%
GTGATGCTTTGTATAAAACC+TGG + Chr4:78201431-78201450 MsG0480022895.01.T01:CDS 35.0%
GTTGAAGTTAGCAAGAAAGT+GGG + Chr4:78198762-78198781 MsG0480022895.01.T01:CDS 35.0%
TAAAAGTAATCCTTGCAGTG+CGG + Chr4:78202903-78202922 MsG0480022895.01.T01:intron 35.0%
TAATGTGAGAGCTATTCTAC+AGG - Chr4:78200403-78200422 None:intergenic 35.0%
TAATTCAAAGCCTGATACAG+GGG - Chr4:78202381-78202400 None:intergenic 35.0%
TATAGCTAGTTGAGTACTTC+AGG + Chr4:78202598-78202617 MsG0480022895.01.T01:intron 35.0%
TCTATTGTGATACATGAGCA+CGG - Chr4:78199876-78199895 None:intergenic 35.0%
TGAACTGGAGTTTATTGTTG+TGG + Chr4:78198452-78198471 MsG0480022895.01.T01:intron 35.0%
TGAGCAAATACAATAGGAAG+TGG - Chr4:78198136-78198155 None:intergenic 35.0%
TGCAACTGATGTCTTAGTAT+TGG + Chr4:78202223-78202242 MsG0480022895.01.T01:intron 35.0%
TGCATATTCACAGGAATAGA+AGG - Chr4:78201096-78201115 None:intergenic 35.0%
TTAACCAGATAATGAATGCC+TGG + Chr4:78203065-78203084 MsG0480022895.01.T01:exon 35.0%
TTACAATCCAAACAACCCAA+TGG - Chr4:78197962-78197981 None:intergenic 35.0%
TTCTTTGATCACTTCAAGTG+AGG - Chr4:78201995-78202014 None:intergenic 35.0%
TTGAAGTTAGCAAGAAAGTG+GGG + Chr4:78198763-78198782 MsG0480022895.01.T01:CDS 35.0%
TTGAGTTCACATGCACATTA+AGG + Chr4:78202523-78202542 MsG0480022895.01.T01:intron 35.0%
TTGCGAAGAATCGTATGATA+TGG - Chr4:78200932-78200951 None:intergenic 35.0%
TTTCTACAATGATCGCTTTC+CGG + Chr4:78198657-78198676 MsG0480022895.01.T01:CDS 35.0%
TTTCTTACCTTATGCACAGT+GGG - Chr4:78202472-78202491 None:intergenic 35.0%
! AACTAGACATCTTTTTCCTC+AGG - Chr4:78199804-78199823 None:intergenic 35.0%
! AATCCTTTGAGAGGACAAAA+AGG - Chr4:78202831-78202850 None:intergenic 35.0%
! ACTTTTCACAGTACTTTTGG+TGG + Chr4:78201940-78201959 MsG0480022895.01.T01:intron 35.0%
! TACTTTTGGTGGAAATCCAT+TGG + Chr4:78201951-78201970 MsG0480022895.01.T01:CDS 35.0%
! TTGATGCGAAGATTTTACAG+AGG + Chr4:78197702-78197721 MsG0480022895.01.T01:CDS 35.0%
! TTTTGTCCTCTCAAAGGATT+AGG + Chr4:78202831-78202850 MsG0480022895.01.T01:intron 35.0%
!! AAATCAACTTTAAGATGGCC+TGG - Chr4:78199148-78199167 None:intergenic 35.0%
!! AATTGTGTCATGTGTTGACT+TGG - Chr4:78202435-78202454 None:intergenic 35.0%
!! AGCCTTGTTTGGTTATGATA+TGG + Chr4:78198699-78198718 MsG0480022895.01.T01:CDS 35.0%
!! GGCCATCTTAAAGTTGATTT+TGG + Chr4:78199148-78199167 MsG0480022895.01.T01:CDS 35.0%
!! TACAAGTCTTGTGACTTGTT+TGG + Chr4:78199652-78199671 MsG0480022895.01.T01:intron 35.0%
!!! GGCTTCATCTTTTTCAACAT+TGG - Chr4:78202982-78203001 None:intergenic 35.0%
!!! TACAAGTCTTGCGACTTTTT+TGG + Chr4:78200025-78200044 MsG0480022895.01.T01:intron 35.0%
!!! TATTTTGGAACCTATCCAAG+GGG + Chr4:78199336-78199355 MsG0480022895.01.T01:CDS 35.0%
!!! TGTCCCTAATATTTTGGTCT+AGG + Chr4:78202872-78202891 MsG0480022895.01.T01:intron 35.0%
AACAAAACTCCACCTTCTGT+TGG + Chr4:78201604-78201623 MsG0480022895.01.T01:intron 40.0%
AACATGAGACAATAAGAGCC+TGG - Chr4:78199042-78199061 None:intergenic 40.0%
AAGACCAATCAAGGGGTTTA+AGG - Chr4:78201568-78201587 None:intergenic 40.0%
ACACCATAAGACCAATCAAG+GGG - Chr4:78201575-78201594 None:intergenic 40.0%
ACGGATCTTGCTAATTACCA+AGG + Chr4:78198246-78198265 MsG0480022895.01.T01:intron 40.0%
AGACCAATCAAGGGGTTTAA+GGG - Chr4:78201567-78201586 None:intergenic 40.0%
AGACTTCTGATTCCAACAGA+AGG - Chr4:78201619-78201638 None:intergenic 40.0%
AGCAAGAACAGGAAAAATGC+TGG + Chr4:78200602-78200621 MsG0480022895.01.T01:CDS 40.0%
AGCTTGAAACTGACACTACA+TGG + Chr4:78200851-78200870 MsG0480022895.01.T01:intron 40.0%
ATTGGACAGATCTACCCAAA+TGG + Chr4:78202241-78202260 MsG0480022895.01.T01:intron 40.0%
CACACCATAAGACCAATCAA+GGG - Chr4:78201576-78201595 None:intergenic 40.0%
CAGATACTAGGGAAAGCTTT+GGG + Chr4:78201365-78201384 MsG0480022895.01.T01:intron 40.0%
CATCGATATCTCAAAGAGAG+TGG - Chr4:78202194-78202213 None:intergenic 40.0%
CATTAAAGGACCAAAACCAC+GGG - Chr4:78199125-78199144 None:intergenic 40.0%
CGTTGAAGTTAGCAAGAAAG+TGG + Chr4:78198761-78198780 MsG0480022895.01.T01:CDS 40.0%
CTATGCGGTACATCATACAA+AGG - Chr4:78199433-78199452 None:intergenic 40.0%
CTCTAATCTAGAAACCTGCT+AGG - Chr4:78199751-78199770 None:intergenic 40.0%
CTTGTCTGAGTCTTAGTCAA+TGG + Chr4:78201123-78201142 MsG0480022895.01.T01:intron 40.0%
CTTTCAAATAACCATCTGGG+GGG - Chr4:78200518-78200537 None:intergenic 40.0%
CTTTCTTACCTTATGCACAG+TGG - Chr4:78202473-78202492 None:intergenic 40.0%
CTTTCTTGCTAACTTCAACG+CGG - Chr4:78198761-78198780 None:intergenic 40.0%
GACACTACATGGCAAGAAAT+AGG + Chr4:78200862-78200881 MsG0480022895.01.T01:intron 40.0%
GCAATTTCACTAGTTCCCAT+AGG - Chr4:78201795-78201814 None:intergenic 40.0%
GCATTAAAGGACCAAAACCA+CGG - Chr4:78199126-78199145 None:intergenic 40.0%
GCTCTTATTGTCTCATGTTG+TGG + Chr4:78199043-78199062 MsG0480022895.01.T01:CDS 40.0%
GCTTTCAAATAACCATCTGG+GGG - Chr4:78200519-78200538 None:intergenic 40.0%
GTCAAATACTCAGCAAACAC+CGG - Chr4:78198679-78198698 None:intergenic 40.0%
GTCATTCCGGTCTAAATTGT+CGG - Chr4:78198284-78198303 None:intergenic 40.0%
GTTAGACAACGAGTTCTATG+CGG - Chr4:78199448-78199467 None:intergenic 40.0%
TAGAAACCTGCTAGGTTTCA+GGG - Chr4:78199743-78199762 None:intergenic 40.0%
TAGACCAGGCATTCATTATC+TGG - Chr4:78203072-78203091 None:intergenic 40.0%
TCACACCATAAGACCAATCA+AGG - Chr4:78201577-78201596 None:intergenic 40.0%
TCAGATACTAGGGAAAGCTT+TGG + Chr4:78201364-78201383 MsG0480022895.01.T01:intron 40.0%
TGAGATCCAACAAGGTTCTA+AGG + Chr4:78202927-78202946 MsG0480022895.01.T01:CDS 40.0%
TGCATTTAACTAGGTACCAC+TGG + Chr4:78201188-78201207 MsG0480022895.01.T01:intron 40.0%
TGCTTCAATGGTCGTACATT+GGG + Chr4:78199067-78199086 MsG0480022895.01.T01:CDS 40.0%
TGTATAAAACCTGGACAGCA+TGG + Chr4:78201440-78201459 MsG0480022895.01.T01:CDS 40.0%
TTAAGATGGCCTGGCATTAA+AGG - Chr4:78199139-78199158 None:intergenic 40.0%
TTCTTACCTTATGCACAGTG+GGG - Chr4:78202471-78202490 None:intergenic 40.0%
TTGGACAGATCTACCCAAAT+GGG + Chr4:78202242-78202261 MsG0480022895.01.T01:intron 40.0%
TTTCACTAGTTCCCATAGGA+TGG - Chr4:78201791-78201810 None:intergenic 40.0%
TTTGTGAATCCTTGTGTCCA+TGG + Chr4:78201710-78201729 MsG0480022895.01.T01:intron 40.0%
! AACATGTGTCAGTGTCATTC+CGG - Chr4:78198297-78198316 None:intergenic 40.0%
! AATCACTCCATTGGGTTGTT+TGG + Chr4:78197952-78197971 MsG0480022895.01.T01:intron 40.0%
! CAAACATAAGTTGGATGGTC+AGG - Chr4:78201219-78201238 None:intergenic 40.0%
! CATCCTTTTTGTCCTCTCAA+AGG + Chr4:78202825-78202844 MsG0480022895.01.T01:intron 40.0%
! CCGCATAGCTGCATTTATTT+TGG + Chr4:78199321-78199340 MsG0480022895.01.T01:CDS 40.0%
! CTTTAAAAGATCAGGCAGAC+AGG + Chr4:78198614-78198633 MsG0480022895.01.T01:CDS 40.0%
! GCGCTCGAGAAAATTTTCAA+AGG + Chr4:78199181-78199200 MsG0480022895.01.T01:CDS 40.0%
! TACAGAGGAACCAGAACTTT+TGG + Chr4:78197717-78197736 MsG0480022895.01.T01:CDS 40.0%
! TTAGTCTTTGCAAGAAGGAC+TGG + Chr4:78199833-78199852 MsG0480022895.01.T01:intron 40.0%
!! AAAAATGCTGGCTTGTGAGT+GGG + Chr4:78200614-78200633 MsG0480022895.01.T01:CDS 40.0%
!! AAACCCCTTGATTGGTCTTA+TGG + Chr4:78201569-78201588 MsG0480022895.01.T01:intron 40.0%
!! CAAACTGGATTAGCAAGAAC+AGG + Chr4:78200591-78200610 MsG0480022895.01.T01:CDS 40.0%
!! GAGTATTTGACAGCCTTGTT+TGG + Chr4:78198688-78198707 MsG0480022895.01.T01:CDS 40.0%
AACATCATCCTGTCGTCACA+CGG + Chr4:78200726-78200745 MsG0480022895.01.T01:intron 45.0%
AATTTCCAGCACATCAGCGA+GGG - Chr4:78202953-78202972 None:intergenic 45.0%
AGAAACCTGCTAGGTTTCAG+GGG - Chr4:78199742-78199761 None:intergenic 45.0%
AGAAGTTCGTCCAGATGTAG+TGG + Chr4:78200638-78200657 MsG0480022895.01.T01:CDS 45.0%
CACAACGATCACATGCACTA+GGG - Chr4:78203029-78203048 None:intergenic 45.0%
CCATTTGCAAGTATGCAGCT+AGG + Chr4:78201161-78201180 MsG0480022895.01.T01:intron 45.0%
CCTAGCTGCATACTTGCAAA+TGG - Chr4:78201164-78201183 None:intergenic 45.0%
CCTTCAGCACCAGTATTCAT+AGG - Chr4:78198730-78198749 None:intergenic 45.0%
CTAGAAACCTGCTAGGTTTC+AGG - Chr4:78199744-78199763 None:intergenic 45.0%
CTGCTTCAATGGTCGTACAT+TGG + Chr4:78199066-78199085 MsG0480022895.01.T01:CDS 45.0%
CTTCTGATTCCAACAGAAGG+TGG - Chr4:78201616-78201635 None:intergenic 45.0%
GAAAGTTTGTCCCCTGTATC+AGG + Chr4:78202368-78202387 MsG0480022895.01.T01:CDS 45.0%
GATCACTTCAAGTGAGGCAA+TGG - Chr4:78201989-78202008 None:intergenic 45.0%
GTCCCTCAGATGAATGAAGA+TGG + Chr4:78198402-78198421 MsG0480022895.01.T01:intron 45.0%
TAAAACCTGGACAGCATGGA+AGG + Chr4:78201444-78201463 MsG0480022895.01.T01:CDS 45.0%
TCATGTTGTGGCTGCTTCAA+TGG + Chr4:78199055-78199074 MsG0480022895.01.T01:CDS 45.0%
TCTTACCTTATGCACAGTGG+GGG - Chr4:78202470-78202489 None:intergenic 45.0%
TGAACACCAACCACTACATC+TGG - Chr4:78200651-78200670 None:intergenic 45.0%
TGGCTACTCTGCAGTTAATC+AGG + Chr4:78198213-78198232 MsG0480022895.01.T01:CDS 45.0%
TGTGACAGTCCATCTTTGAC+CGG + Chr4:78200250-78200269 MsG0480022895.01.T01:intron 45.0%
TGTGGCAACACCAAAAGTTC+TGG - Chr4:78197730-78197749 None:intergenic 45.0%
TTAAACCTTCCATGCTGTCC+AGG - Chr4:78201452-78201471 None:intergenic 45.0%
TTTACTAACCGTGTGACGAC+AGG - Chr4:78200737-78200756 None:intergenic 45.0%
! AATGAAGCTACCCGTGGTTT+TGG + Chr4:78199112-78199131 MsG0480022895.01.T01:CDS 45.0%
! CCTATGAATACTGGTGCTGA+AGG + Chr4:78198727-78198746 MsG0480022895.01.T01:CDS 45.0%
! CCTTTTTCTGCAGTTCAGCA+GGG - Chr4:78199298-78199317 None:intergenic 45.0%
! GTACTTCAGGTTATGCGTCT+TGG + Chr4:78202611-78202630 MsG0480022895.01.T01:intron 45.0%
! TCCTTTTTCTGCAGTTCAGC+AGG - Chr4:78199299-78199318 None:intergenic 45.0%
! TGCTGATGGAAACTTGTTCC+AGG + Chr4:78199021-78199040 MsG0480022895.01.T01:intron 45.0%
! TTGGGAAGATGAAGAAGCGT+TGG - Chr4:78197757-78197776 None:intergenic 45.0%
!! AAGAAGAGAGACTTGCTGAG+AGG + Chr4:78202010-78202029 MsG0480022895.01.T01:CDS 45.0%
!! ATACTAGGGAAAGCTTTGGG+TGG + Chr4:78201368-78201387 MsG0480022895.01.T01:CDS 45.0%
!! GAAAAATGCTGGCTTGTGAG+TGG + Chr4:78200613-78200632 MsG0480022895.01.T01:CDS 45.0%
!! GGTTTTGGTCCTTTAATGCC+AGG + Chr4:78199127-78199146 MsG0480022895.01.T01:CDS 45.0%
!! GTAGCACCGACAATTTAGAC+CGG + Chr4:78198275-78198294 MsG0480022895.01.T01:intron 45.0%
!! TGGGAAGATGAAGAAGCGTT+GGG - Chr4:78197756-78197775 None:intergenic 45.0%
AACCTATCCAAGGGGAAGCT+GGG + Chr4:78199344-78199363 MsG0480022895.01.T01:CDS 50.0%
ACAATACCCGGACCATGTGA+AGG + Chr4:78202301-78202320 MsG0480022895.01.T01:CDS 50.0%
AGTGCGGATGAGATCCAACA+AGG + Chr4:78202919-78202938 MsG0480022895.01.T01:intron 50.0%
ATGCAAAGGGATCAGCTGTG+TGG + Chr4:78198155-78198174 MsG0480022895.01.T01:CDS 50.0%
CAAATGGGAGGTGAGCTTCT+CGG + Chr4:78202257-78202276 MsG0480022895.01.T01:CDS 50.0%
CAATTTCCAGCACATCAGCG+AGG - Chr4:78202954-78202973 None:intergenic 50.0%
CCAATCAAGGGGTTTAAGGG+CGG - Chr4:78201564-78201583 None:intergenic 50.0%
CCACAACGATCACATGCACT+AGG - Chr4:78203030-78203049 None:intergenic 50.0%
CCCTGCTGAACTGCAGAAAA+AGG + Chr4:78199295-78199314 MsG0480022895.01.T01:intron 50.0%
CCTAGTGCATGTGATCGTTG+TGG + Chr4:78203027-78203046 MsG0480022895.01.T01:CDS 50.0%
CGATACAGACATGCTGACAC+CGG - Chr4:78198350-78198369 None:intergenic 50.0%
GAAACCTGCTAGGTTTCAGG+GGG - Chr4:78199741-78199760 None:intergenic 50.0%
GAACGAAAGCCGGTCAAAGA+TGG - Chr4:78200262-78200281 None:intergenic 50.0%
GACAGATCTACCCAAATGGG+AGG + Chr4:78202245-78202264 MsG0480022895.01.T01:intron 50.0%
GAGAAGCTCACCTCCCATTT+GGG - Chr4:78202258-78202277 None:intergenic 50.0%
GTTCGTCCAGATGTAGTGGT+TGG + Chr4:78200642-78200661 MsG0480022895.01.T01:intron 50.0%
TCAAGACATGCAAACGGCCA+TGG - Chr4:78201730-78201749 None:intergenic 50.0%
TCTGCAAGAACTGCGCTAAC+TGG - Chr4:78201404-78201423 None:intergenic 50.0%
TGCAAAGGGATCAGCTGTGT+GGG + Chr4:78198156-78198175 MsG0480022895.01.T01:CDS 50.0%
TGTGACAATGAAGCTACCCG+TGG + Chr4:78199106-78199125 MsG0480022895.01.T01:CDS 50.0%
! CGGTGTCAGCATGTCTGTAT+CGG + Chr4:78198348-78198367 MsG0480022895.01.T01:intron 50.0%
! GAATACTGGTGCTGAAGGTG+TGG + Chr4:78198732-78198751 MsG0480022895.01.T01:CDS 50.0%
!! GTCGGTGCTACATAAAGCCT+TGG - Chr4:78198266-78198285 None:intergenic 50.0%
!! TGAAGAAGCGTTGGGTTGTG+TGG - Chr4:78197748-78197767 None:intergenic 50.0%
AAAGATGCTGCTCCTCCAGC+TGG + Chr4:78203003-78203022 MsG0480022895.01.T01:CDS 55.0%
AACATACCCCAGCTTCCCCT+TGG - Chr4:78199354-78199373 None:intergenic 55.0%
ACCTATCCAAGGGGAAGCTG+GGG + Chr4:78199345-78199364 MsG0480022895.01.T01:CDS 55.0%
AGATCAGGCAGACAGGCTGA+CGG + Chr4:78198621-78198640 MsG0480022895.01.T01:CDS 55.0%
ATACCCGGACCATGTGAAGG+AGG + Chr4:78202304-78202323 MsG0480022895.01.T01:CDS 55.0%
ATCAGCTGTGTGGGATCCAG+AGG + Chr4:78198165-78198184 MsG0480022895.01.T01:CDS 55.0%
CAGGTGAAAATCCCCCCAGA+TGG + Chr4:78200504-78200523 MsG0480022895.01.T01:intron 55.0%
CCGCCCTTAAACCCCTTGAT+TGG + Chr4:78201561-78201580 MsG0480022895.01.T01:intron 55.0%
CGAGAAGCTCACCTCCCATT+TGG - Chr4:78202259-78202278 None:intergenic 55.0%
CGAGGGCCTTAGAACCTTGT+TGG - Chr4:78202936-78202955 None:intergenic 55.0%
CGGGGAAGAGGACTGTTCAT+TGG + Chr4:78202329-78202348 MsG0480022895.01.T01:CDS 55.0%
CGTTGTGGTCGAGTCGTGTA+TGG + Chr4:78203042-78203061 MsG0480022895.01.T01:CDS 55.0%
GAACCTATCCAAGGGGAAGC+TGG + Chr4:78199343-78199362 MsG0480022895.01.T01:CDS 55.0%
GGATGGTCAGGTCTATCCAG+TGG - Chr4:78201207-78201226 None:intergenic 55.0%
TCACTCCCCCACTGTGCATA+AGG + Chr4:78202462-78202481 MsG0480022895.01.T01:CDS 55.0%
TCAGCTGTGTGGGATCCAGA+GGG + Chr4:78198166-78198185 MsG0480022895.01.T01:CDS 55.0%
TGAGGCAATGGCAACTGCAC+TGG - Chr4:78201977-78201996 None:intergenic 55.0%
TGCAAACGGCCATGGACACA+AGG - Chr4:78201722-78201741 None:intergenic 55.0%
TGGATCTCATCCGCACTGCA+AGG - Chr4:78202916-78202935 None:intergenic 55.0%
TTCTCCCCCTGAAACCTAGC+AGG + Chr4:78199734-78199753 MsG0480022895.01.T01:intron 55.0%
! ATGGCAACTGCACTGGCCAA+TGG - Chr4:78201970-78201989 None:intergenic 55.0%
! GCTGGAGGAGCAGCATCTTT+TGG - Chr4:78203003-78203022 None:intergenic 55.0%
! GTCTGTATCGGTGCTTCGTC+AGG + Chr4:78198360-78198379 MsG0480022895.01.T01:intron 55.0%
!! CTAGGGAAAGCTTTGGGTGG+AGG + Chr4:78201371-78201390 MsG0480022895.01.T01:CDS 55.0%
ACCCCAGCTTCCCCTTGGAT+AGG - Chr4:78199349-78199368 None:intergenic 60.0%
CGCACCTCCTTCACATGGTC+CGG - Chr4:78202311-78202330 None:intergenic 60.0%
CGGACCATGTGAAGGAGGTG+CGG + Chr4:78202309-78202328 MsG0480022895.01.T01:CDS 60.0%
GCACCTCCTTCACATGGTCC+GGG - Chr4:78202310-78202329 None:intergenic 60.0%
TAAGGCCCTCGCTGATGTGC+TGG + Chr4:78202945-78202964 MsG0480022895.01.T01:CDS 60.0%
TCACATGCACTAGGGCCAGC+TGG - Chr4:78203021-78203040 None:intergenic 60.0%
TTCCCCGCACCTCCTTCACA+TGG - Chr4:78202316-78202335 None:intergenic 60.0%
! GACCATGTGAAGGAGGTGCG+GGG + Chr4:78202311-78202330 MsG0480022895.01.T01:CDS 60.0%
! GGACCATGTGAAGGAGGTGC+GGG + Chr4:78202310-78202329 MsG0480022895.01.T01:CDS 60.0%
CATGCACTAGGGCCAGCTGG+AGG - Chr4:78203018-78203037 None:intergenic 65.0%
! GTGAAGGAGGTGCGGGGAAG+AGG + Chr4:78202317-78202336 MsG0480022895.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 78197675 78203236 78197675 ID=MsG0480022895.01;Name=MsG0480022895.01
Chr4 mRNA 78197675 78203236 78197675 ID=MsG0480022895.01.T01;Parent=MsG0480022895.01;Name=MsG0480022895.01.T01;_AED=0.36;_eAED=0.37;_QI=0|0.88|0.9|1|0.88|0.9|10|168|478
Chr4 exon 78197675 78197841 78197675 ID=MsG0480022895.01.T01:exon:3784;Parent=MsG0480022895.01.T01
Chr4 exon 78198126 78198234 78198126 ID=MsG0480022895.01.T01:exon:3785;Parent=MsG0480022895.01.T01
Chr4 exon 78198586 78198816 78198586 ID=MsG0480022895.01.T01:exon:3786;Parent=MsG0480022895.01.T01
Chr4 exon 78199043 78199202 78199043 ID=MsG0480022895.01.T01:exon:3787;Parent=MsG0480022895.01.T01
Chr4 exon 78199311 78199366 78199311 ID=MsG0480022895.01.T01:exon:3788;Parent=MsG0480022895.01.T01
Chr4 exon 78200507 78200659 78200507 ID=MsG0480022895.01.T01:exon:3789;Parent=MsG0480022895.01.T01
Chr4 exon 78201368 78201465 78201368 ID=MsG0480022895.01.T01:exon:3790;Parent=MsG0480022895.01.T01
Chr4 exon 78201951 78202031 78201951 ID=MsG0480022895.01.T01:exon:3791;Parent=MsG0480022895.01.T01
Chr4 exon 78202250 78202483 78202250 ID=MsG0480022895.01.T01:exon:3792;Parent=MsG0480022895.01.T01
Chr4 exon 78202921 78203236 78202921 ID=MsG0480022895.01.T01:exon:3793;Parent=MsG0480022895.01.T01
Chr4 CDS 78197675 78197841 78197675 ID=MsG0480022895.01.T01:cds;Parent=MsG0480022895.01.T01
Chr4 CDS 78198126 78198234 78198126 ID=MsG0480022895.01.T01:cds;Parent=MsG0480022895.01.T01
Chr4 CDS 78198586 78198816 78198586 ID=MsG0480022895.01.T01:cds;Parent=MsG0480022895.01.T01
Chr4 CDS 78199043 78199202 78199043 ID=MsG0480022895.01.T01:cds;Parent=MsG0480022895.01.T01
Chr4 CDS 78199311 78199366 78199311 ID=MsG0480022895.01.T01:cds;Parent=MsG0480022895.01.T01
Chr4 CDS 78200507 78200659 78200507 ID=MsG0480022895.01.T01:cds;Parent=MsG0480022895.01.T01
Chr4 CDS 78201368 78201465 78201368 ID=MsG0480022895.01.T01:cds;Parent=MsG0480022895.01.T01
Chr4 CDS 78201951 78202031 78201951 ID=MsG0480022895.01.T01:cds;Parent=MsG0480022895.01.T01
Chr4 CDS 78202250 78202483 78202250 ID=MsG0480022895.01.T01:cds;Parent=MsG0480022895.01.T01
Chr4 CDS 78202921 78203068 78202921 ID=MsG0480022895.01.T01:cds;Parent=MsG0480022895.01.T01
Chr4 three_prime_UTR 78203069 78203236 78203069 ID=MsG0480022895.01.T01:three_prime_utr;Parent=MsG0480022895.01.T01
Gene Sequence

>MsG0480022895.01.T01

ATGGCTTCAACAAGACAAGTACAGTGTTTGATGCGAAGATTTTACAGAGGAACCAGAACTTTTGGTGTTGCCACACAACCCAACGCTTCTTCATCTTCCCAAACAATCATTGACAAAGAATTTCAACACAGTGCCCACAAGTATATATCTTTCCCTTGTTTTCTTCTTTACCATCCACTTCCTATTGTATTTGCTCATGCAAAGGGATCAGCTGTGTGGGATCCAGAGGGAAACAAATATATTGATTTTTTATCTGGCTACTCTGCAGTTAATCAGGGACATTGTCATCCTAAAATTCTTAAAGCTTTAAAAGATCAGGCAGACAGGCTGACGGTGAGCTCACGAGCTTTCTACAATGATCGCTTTCCGGTGTTTGCTGAGTATTTGACAGCCTTGTTTGGTTATGATATGGTACTTCCTATGAATACTGGTGCTGAAGGTGTGGAAACCGCGTTGAAGTTAGCAAGAAAGTGGGGTTATGAAAAGAAAAAAATTCCCAACAATGAGGCTCTTATTGTCTCATGTTGTGGCTGCTTCAATGGTCGTACATTGGGTGTCATATCTATGAGTTGTGACAATGAAGCTACCCGTGGTTTTGGTCCTTTAATGCCAGGCCATCTTAAAGTTGATTTTGGTGATGCAGAAGCGCTCGAGAAAATTTTCAAAGAAAAAGGAGACCGCATAGCTGCATTTATTTTGGAACCTATCCAAGGGGAAGCTGGGGTGAAAATCCCCCCAGATGGTTATTTGAAAGCTGTTAGAGATCTTTGTTCCAAATATAACGTGTTGATGATTGCTGATGAAATACAAACTGGATTAGCAAGAACAGGAAAAATGCTGGCTTGTGAGTGGGAAGAAGTTCGTCCAGATGTAGTGATACTAGGGAAAGCTTTGGGTGGAGGAATTATTCCAGTTAGCGCAGTTCTTGCAGACAAAGAAGTGATGCTTTGTATAAAACCTGGACAGCATGGAAGTACTTTTGGTGGAAATCCATTGGCCAGTGCAGTTGCCATTGCCTCACTTGAAGTGATCAAAGAAGAGAGACTTGCTGAGAGATCTACCCAAATGGGAGGTGAGCTTCTCGGTCTGCTGCAGAAGATTCAGAAACAATACCCGGACCATGTGAAGGAGGTGCGGGGAAGAGGACTGTTCATTGGAGTCGAGCTTAACAGCGAAAGTTTGTCCCCTGTATCAGGCTTTGAATTAAGTGAAAAATTGAAGGATAGAGGAGTTCTTGCCAAGTCAACACATGACACAATTATTCGCTTCACTCCCCCACTGTGCATAAGTGCGGATGAGATCCAACAAGGTTCTAAGGCCCTCGCTGATGTGCTGGAAATTGATCTACCAATGTTGAAAAAGATGAAGCCAAAAGATGCTGCTCCTCCAGCTGGCCCTAGTGCATGTGATCGTTGTGGTCGAGTCGTGTATGGTTAA
Protein sequence

>MsG0480022895.01.T01

MASTRQVQCLMRRFYRGTRTFGVATQPNASSSSQTIIDKEFQHSAHKYISFPCFLLYHPLPIVFAHAKGSAVWDPEGNKYIDFLSGYSAVNQGHCHPKILKALKDQADRLTVSSRAFYNDRFPVFAEYLTALFGYDMVLPMNTGAEGVETALKLARKWGYEKKKIPNNEALIVSCCGCFNGRTLGVISMSCDNEATRGFGPLMPGHLKVDFGDAEALEKIFKEKGDRIAAFILEPIQGEAGVKIPPDGYLKAVRDLCSKYNVLMIADEIQTGLARTGKMLACEWEEVRPDVVILGKALGGGIIPVSAVLADKEVMLCIKPGQHGSTFGGNPLASAVAIASLEVIKEERLAERSTQMGGELLGLLQKIQKQYPDHVKEVRGRGLFIGVELNSESLSPVSGFELSEKLKDRGVLAKSTHDTIIRFTPPLCISADEIQQGSKALADVLEIDLPMLKKMKPKDAAPPAGPSACDRCGRVVYG*